Multiple sequence alignment - TraesCS1A01G208500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G208500 chr1A 100.000 7079 0 0 1 7079 370091570 370098648 0.000000e+00 13073.0
1 TraesCS1A01G208500 chr1A 96.091 793 27 4 1 790 579937467 579938258 0.000000e+00 1290.0
2 TraesCS1A01G208500 chr1A 95.641 803 29 6 1 800 37970623 37971422 0.000000e+00 1284.0
3 TraesCS1A01G208500 chr1A 93.519 108 7 0 6348 6455 321291443 321291336 2.040000e-35 161.0
4 TraesCS1A01G208500 chr1A 90.385 52 5 0 6478 6529 21419525 21419474 1.270000e-07 69.4
5 TraesCS1A01G208500 chr1D 93.015 5598 255 59 790 6325 297521322 297526845 0.000000e+00 8046.0
6 TraesCS1A01G208500 chr1D 89.655 203 20 1 6471 6672 365727345 365727143 2.530000e-64 257.0
7 TraesCS1A01G208500 chr1D 88.372 172 10 4 6873 7034 297526928 297527099 1.560000e-46 198.0
8 TraesCS1A01G208500 chr1D 98.462 65 1 0 6746 6810 297526851 297526915 1.610000e-21 115.0
9 TraesCS1A01G208500 chr1D 84.685 111 12 3 6645 6750 397061925 397061815 9.710000e-19 106.0
10 TraesCS1A01G208500 chr1B 92.484 3007 163 24 3362 6325 400300227 400303213 0.000000e+00 4242.0
11 TraesCS1A01G208500 chr1B 94.453 2560 93 22 790 3345 400292608 400295122 0.000000e+00 3895.0
12 TraesCS1A01G208500 chr1B 89.078 293 22 6 6749 7034 400303218 400303507 8.730000e-94 355.0
13 TraesCS1A01G208500 chr1B 87.554 233 24 4 6456 6687 329484984 329484756 1.510000e-66 265.0
14 TraesCS1A01G208500 chr1B 88.318 214 18 5 6503 6713 200584205 200584414 4.240000e-62 250.0
15 TraesCS1A01G208500 chr1B 94.231 52 3 0 3329 3380 400300172 400300223 5.890000e-11 80.5
16 TraesCS1A01G208500 chr7A 96.474 794 25 3 1 792 699990386 699989594 0.000000e+00 1308.0
17 TraesCS1A01G208500 chr7A 94.199 793 40 6 2 790 608416311 608415521 0.000000e+00 1205.0
18 TraesCS1A01G208500 chr7A 93.694 111 7 0 6348 6458 48913667 48913777 4.390000e-37 167.0
19 TraesCS1A01G208500 chr7A 89.744 117 10 2 6344 6460 635205284 635205170 1.590000e-31 148.0
20 TraesCS1A01G208500 chr2A 96.226 795 26 4 1 792 739246307 739247100 0.000000e+00 1299.0
21 TraesCS1A01G208500 chr2A 95.718 794 30 4 1 792 31091572 31090781 0.000000e+00 1275.0
22 TraesCS1A01G208500 chr2A 95.707 792 30 3 1 790 600525562 600526351 0.000000e+00 1271.0
23 TraesCS1A01G208500 chr2A 88.000 125 13 2 6332 6454 54465619 54465495 5.720000e-31 147.0
24 TraesCS1A01G208500 chr5B 96.217 793 25 5 1 790 644133753 644132963 0.000000e+00 1293.0
25 TraesCS1A01G208500 chr5B 88.085 235 23 4 6456 6687 363261427 363261195 2.520000e-69 274.0
26 TraesCS1A01G208500 chr5B 88.525 122 14 0 6337 6458 601395322 601395443 1.590000e-31 148.0
27 TraesCS1A01G208500 chr5A 95.970 794 27 4 1 790 566575595 566574803 0.000000e+00 1284.0
28 TraesCS1A01G208500 chr5A 95.718 794 27 5 1 788 143012524 143013316 0.000000e+00 1271.0
29 TraesCS1A01G208500 chr5A 85.437 309 32 9 6456 6753 670399127 670399433 6.900000e-80 309.0
30 TraesCS1A01G208500 chr5A 91.228 114 10 0 6341 6454 560140674 560140787 9.510000e-34 156.0
31 TraesCS1A01G208500 chr5A 90.517 116 9 2 6340 6454 663713640 663713754 1.230000e-32 152.0
32 TraesCS1A01G208500 chr5A 94.340 53 2 1 7028 7079 332295181 332295129 5.890000e-11 80.5
33 TraesCS1A01G208500 chr3A 95.603 796 32 3 1 794 493699287 493700081 0.000000e+00 1273.0
34 TraesCS1A01G208500 chr3A 95.340 794 34 3 1 791 127798579 127797786 0.000000e+00 1258.0
35 TraesCS1A01G208500 chr3A 85.621 306 33 5 6456 6750 10301613 10301918 1.920000e-80 311.0
36 TraesCS1A01G208500 chr3A 92.523 107 8 0 6348 6454 30088459 30088353 3.420000e-33 154.0
37 TraesCS1A01G208500 chr6A 95.449 791 33 3 3 791 20738727 20737938 0.000000e+00 1258.0
38 TraesCS1A01G208500 chr6A 90.991 111 10 0 6347 6457 336442897 336443007 4.420000e-32 150.0
39 TraesCS1A01G208500 chr6A 96.078 51 2 0 7029 7079 147152691 147152641 4.550000e-12 84.2
40 TraesCS1A01G208500 chr4A 91.453 819 29 15 1 790 722675225 722676031 0.000000e+00 1086.0
41 TraesCS1A01G208500 chr4A 95.986 573 19 4 220 790 563887391 563887961 0.000000e+00 928.0
42 TraesCS1A01G208500 chr4A 94.545 55 1 2 7027 7079 467543040 467542986 4.550000e-12 84.2
43 TraesCS1A01G208500 chr4A 92.727 55 2 2 7027 7079 467542465 467542411 2.120000e-10 78.7
44 TraesCS1A01G208500 chr4D 91.793 792 42 6 1 790 278330560 278331330 0.000000e+00 1081.0
45 TraesCS1A01G208500 chr4B 96.510 573 17 3 220 790 401125329 401125900 0.000000e+00 944.0
46 TraesCS1A01G208500 chr5D 83.226 310 38 9 6456 6751 542970917 542971226 9.050000e-69 272.0
47 TraesCS1A01G208500 chr5D 85.714 126 14 1 6630 6751 480359840 480359715 5.760000e-26 130.0
48 TraesCS1A01G208500 chr5D 88.172 93 8 2 6658 6750 564892282 564892371 2.700000e-19 108.0
49 TraesCS1A01G208500 chr5D 94.444 54 3 0 7026 7079 491718647 491718594 4.550000e-12 84.2
50 TraesCS1A01G208500 chr6D 90.640 203 19 0 6485 6687 454801248 454801450 3.250000e-68 270.0
51 TraesCS1A01G208500 chr7D 92.147 191 11 3 6500 6687 524077040 524077229 4.210000e-67 267.0
52 TraesCS1A01G208500 chr7D 84.906 106 16 0 6645 6750 36659842 36659737 2.700000e-19 108.0
53 TraesCS1A01G208500 chr7D 75.000 224 42 12 471 691 207240344 207240556 2.720000e-14 91.6
54 TraesCS1A01G208500 chr2D 88.571 105 11 1 6649 6753 590279369 590279472 7.450000e-25 126.0
55 TraesCS1A01G208500 chrUn 86.000 100 10 3 6651 6750 406084302 406084397 3.490000e-18 104.0
56 TraesCS1A01G208500 chrUn 85.000 100 11 3 6651 6750 162965930 162965835 1.630000e-16 99.0
57 TraesCS1A01G208500 chr6B 90.769 65 5 1 7015 7079 560691290 560691227 1.270000e-12 86.1
58 TraesCS1A01G208500 chr6B 94.118 51 3 0 7029 7079 632435021 632435071 2.120000e-10 78.7
59 TraesCS1A01G208500 chr3B 94.340 53 3 0 7027 7079 720216412 720216360 1.640000e-11 82.4
60 TraesCS1A01G208500 chr3D 94.231 52 3 0 7028 7079 538390603 538390654 5.890000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G208500 chr1A 370091570 370098648 7078 False 13073.000000 13073 100.000 1 7079 1 chr1A.!!$F2 7078
1 TraesCS1A01G208500 chr1A 579937467 579938258 791 False 1290.000000 1290 96.091 1 790 1 chr1A.!!$F3 789
2 TraesCS1A01G208500 chr1A 37970623 37971422 799 False 1284.000000 1284 95.641 1 800 1 chr1A.!!$F1 799
3 TraesCS1A01G208500 chr1D 297521322 297527099 5777 False 2786.333333 8046 93.283 790 7034 3 chr1D.!!$F1 6244
4 TraesCS1A01G208500 chr1B 400292608 400295122 2514 False 3895.000000 3895 94.453 790 3345 1 chr1B.!!$F2 2555
5 TraesCS1A01G208500 chr1B 400300172 400303507 3335 False 1559.166667 4242 91.931 3329 7034 3 chr1B.!!$F3 3705
6 TraesCS1A01G208500 chr7A 699989594 699990386 792 True 1308.000000 1308 96.474 1 792 1 chr7A.!!$R3 791
7 TraesCS1A01G208500 chr7A 608415521 608416311 790 True 1205.000000 1205 94.199 2 790 1 chr7A.!!$R1 788
8 TraesCS1A01G208500 chr2A 739246307 739247100 793 False 1299.000000 1299 96.226 1 792 1 chr2A.!!$F2 791
9 TraesCS1A01G208500 chr2A 31090781 31091572 791 True 1275.000000 1275 95.718 1 792 1 chr2A.!!$R1 791
10 TraesCS1A01G208500 chr2A 600525562 600526351 789 False 1271.000000 1271 95.707 1 790 1 chr2A.!!$F1 789
11 TraesCS1A01G208500 chr5B 644132963 644133753 790 True 1293.000000 1293 96.217 1 790 1 chr5B.!!$R2 789
12 TraesCS1A01G208500 chr5A 566574803 566575595 792 True 1284.000000 1284 95.970 1 790 1 chr5A.!!$R2 789
13 TraesCS1A01G208500 chr5A 143012524 143013316 792 False 1271.000000 1271 95.718 1 788 1 chr5A.!!$F1 787
14 TraesCS1A01G208500 chr3A 493699287 493700081 794 False 1273.000000 1273 95.603 1 794 1 chr3A.!!$F2 793
15 TraesCS1A01G208500 chr3A 127797786 127798579 793 True 1258.000000 1258 95.340 1 791 1 chr3A.!!$R2 790
16 TraesCS1A01G208500 chr6A 20737938 20738727 789 True 1258.000000 1258 95.449 3 791 1 chr6A.!!$R1 788
17 TraesCS1A01G208500 chr4A 722675225 722676031 806 False 1086.000000 1086 91.453 1 790 1 chr4A.!!$F2 789
18 TraesCS1A01G208500 chr4A 563887391 563887961 570 False 928.000000 928 95.986 220 790 1 chr4A.!!$F1 570
19 TraesCS1A01G208500 chr4D 278330560 278331330 770 False 1081.000000 1081 91.793 1 790 1 chr4D.!!$F1 789
20 TraesCS1A01G208500 chr4B 401125329 401125900 571 False 944.000000 944 96.510 220 790 1 chr4B.!!$F1 570

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
866 901 0.318441 TCCAGCTGAACACGAGAAGG 59.682 55.000 17.39 0.0 0.0 3.46 F
1344 1380 1.268896 GCTGATGTGCGATTTGATGGG 60.269 52.381 0.00 0.0 0.0 4.00 F
2375 2411 0.606673 GTGGGGCTGTTCTTGGTCTC 60.607 60.000 0.00 0.0 0.0 3.36 F
3770 3841 1.336332 ACATCGCTGTCACTGTCAGAC 60.336 52.381 6.91 0.0 35.2 3.51 F
5485 5580 0.391228 TCCTAGCTGAAACGTGTGCA 59.609 50.000 0.00 0.0 0.0 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2342 2378 0.613853 CCCCACTTCCCACGAGTAGA 60.614 60.000 0.00 0.0 0.00 2.59 R
3003 3040 4.098807 TGAACTTTAAACACTGAAAGCCCC 59.901 41.667 0.00 0.0 37.60 5.80 R
4100 4173 2.125269 CCGTAAGTGGAAGGGCCG 60.125 66.667 0.00 0.0 40.66 6.13 R
5568 5675 0.102844 GCAAAGCACAAGCCAGTGAA 59.897 50.000 10.06 0.0 42.05 3.18 R
6636 6763 0.034059 CATATGTGCTCCCTCCGTCC 59.966 60.000 0.00 0.0 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 39 5.723672 AAATTGAAGGACGAGACTACTGA 57.276 39.130 0.00 0.00 0.00 3.41
327 359 3.704566 AGGCATGAAGAACTCGGTACATA 59.295 43.478 0.00 0.00 0.00 2.29
673 707 4.815533 ACTGTGACAAGTATCTCATGCT 57.184 40.909 0.00 0.00 0.00 3.79
686 720 9.454859 AAGTATCTCATGCTAAGCTTTAGTTTT 57.545 29.630 3.20 0.00 0.00 2.43
740 775 7.096189 CGATGACCATTTAACTAGGTGTAATCG 60.096 40.741 1.68 1.68 35.36 3.34
832 867 3.202001 CAATACGTGGCGCCCCTG 61.202 66.667 26.77 16.26 0.00 4.45
833 868 3.712907 AATACGTGGCGCCCCTGT 61.713 61.111 26.77 21.39 0.00 4.00
834 869 3.262448 AATACGTGGCGCCCCTGTT 62.262 57.895 26.77 9.71 0.00 3.16
835 870 2.757980 AATACGTGGCGCCCCTGTTT 62.758 55.000 26.77 11.81 0.00 2.83
838 873 3.989787 GTGGCGCCCCTGTTTTGG 61.990 66.667 26.77 0.00 0.00 3.28
856 891 3.517296 TGGTTTGGTTATCCAGCTGAA 57.483 42.857 17.39 0.00 45.22 3.02
866 901 0.318441 TCCAGCTGAACACGAGAAGG 59.682 55.000 17.39 0.00 0.00 3.46
943 978 1.442526 GCTTCCGTGGCATGGATCTG 61.443 60.000 28.16 20.60 32.39 2.90
990 1025 2.438975 ACCACCGCGTCCGATCTA 60.439 61.111 4.92 0.00 36.29 1.98
1116 1151 2.231215 GCTCCATTAGCGAGTGTCAT 57.769 50.000 0.00 0.00 42.53 3.06
1261 1296 2.655685 GATCTCGCCGGCGTTCTC 60.656 66.667 44.16 32.47 40.74 2.87
1298 1333 3.008049 ACGGCCTTCTGTTGTAAGATTCT 59.992 43.478 0.00 0.00 0.00 2.40
1307 1342 7.468141 TCTGTTGTAAGATTCTTAGAGAGCA 57.532 36.000 6.37 5.69 0.00 4.26
1338 1373 1.468565 GCATGTGCTGATGTGCGATTT 60.469 47.619 0.00 0.00 38.21 2.17
1344 1380 1.268896 GCTGATGTGCGATTTGATGGG 60.269 52.381 0.00 0.00 0.00 4.00
1455 1491 9.248291 GTTTCTTGTGTTGATGTGTATTGAATT 57.752 29.630 0.00 0.00 0.00 2.17
1456 1492 8.800231 TTCTTGTGTTGATGTGTATTGAATTG 57.200 30.769 0.00 0.00 0.00 2.32
1457 1493 8.164058 TCTTGTGTTGATGTGTATTGAATTGA 57.836 30.769 0.00 0.00 0.00 2.57
1458 1494 8.628280 TCTTGTGTTGATGTGTATTGAATTGAA 58.372 29.630 0.00 0.00 0.00 2.69
1459 1495 9.414295 CTTGTGTTGATGTGTATTGAATTGAAT 57.586 29.630 0.00 0.00 0.00 2.57
1530 1566 4.327357 ACTTTATTCGATGTCACTGCTTCG 59.673 41.667 0.00 0.00 37.37 3.79
1534 1570 1.416813 CGATGTCACTGCTTCGGCTC 61.417 60.000 0.00 0.00 42.37 4.70
1640 1676 2.969950 TGCCTTGTTAGACTGTACCACT 59.030 45.455 0.00 0.00 0.00 4.00
1673 1709 1.339610 ACGCCAATTTGCTTGTGCTAA 59.660 42.857 0.00 0.00 40.48 3.09
1690 1726 5.105187 TGTGCTAATCTGCTAGATTGTCTGT 60.105 40.000 16.76 0.00 44.14 3.41
1734 1770 6.763135 TCAAAATAGTTCTGATGGGAATCTCG 59.237 38.462 0.00 0.00 0.00 4.04
1979 2015 5.073311 TCTGGCAGACTGTAGTAATGTTC 57.927 43.478 14.43 0.00 0.00 3.18
2032 2068 7.889873 TTGTATTGGTTATGATTTGTAGGGG 57.110 36.000 0.00 0.00 0.00 4.79
2214 2250 3.743521 CAAACAAGAGATGGGTCAGTCA 58.256 45.455 0.00 0.00 0.00 3.41
2238 2274 9.123902 TCATCTATCTAAAATGTTGGGTCATTG 57.876 33.333 0.00 0.00 37.96 2.82
2266 2302 4.082081 AGTGCCATGTCATTGTTTATGTGG 60.082 41.667 0.00 0.00 35.64 4.17
2282 2318 3.507103 TGTGGGCGATTTGATCATTTG 57.493 42.857 0.00 0.00 0.00 2.32
2342 2378 4.929146 AGGTTCTTTGTACATTAGGCCT 57.071 40.909 11.78 11.78 0.00 5.19
2375 2411 0.606673 GTGGGGCTGTTCTTGGTCTC 60.607 60.000 0.00 0.00 0.00 3.36
2450 2486 4.122046 ACTTCAAGGTTTGCATCAAAAGC 58.878 39.130 0.00 0.00 35.03 3.51
2974 3010 7.490962 TTATGTTTCTGACGTCTTGATTTGT 57.509 32.000 17.92 5.35 0.00 2.83
2978 3014 7.087639 TGTTTCTGACGTCTTGATTTGTTTTT 58.912 30.769 17.92 0.00 0.00 1.94
2979 3015 8.237949 TGTTTCTGACGTCTTGATTTGTTTTTA 58.762 29.630 17.92 0.00 0.00 1.52
2983 3019 9.445786 TCTGACGTCTTGATTTGTTTTTATTTC 57.554 29.630 17.92 0.00 0.00 2.17
3232 3271 6.967199 CCGTGCATCTTTAACCTTTAAATCTC 59.033 38.462 0.00 0.00 0.00 2.75
3416 3487 6.317140 GTGAATGCTCATTTATCCTCAAGTCA 59.683 38.462 0.00 0.00 33.05 3.41
3522 3593 4.607955 TCACTAGCTGAAATCCGTAATCG 58.392 43.478 0.00 0.00 0.00 3.34
3533 3604 8.929827 TGAAATCCGTAATCGTAAACATCTTA 57.070 30.769 0.00 0.00 35.01 2.10
3770 3841 1.336332 ACATCGCTGTCACTGTCAGAC 60.336 52.381 6.91 0.00 35.20 3.51
3878 3949 6.948886 TGTCTGGATATCCTAGTACCATCTTC 59.051 42.308 22.35 0.00 36.82 2.87
3889 3960 5.470047 AGTACCATCTTCACTCGAACTTT 57.530 39.130 0.00 0.00 0.00 2.66
3893 3964 5.607477 ACCATCTTCACTCGAACTTTAACA 58.393 37.500 0.00 0.00 0.00 2.41
3912 3983 8.541133 TTTAACATATTTTGCTTAAAGGGCAC 57.459 30.769 0.00 0.00 39.55 5.01
4037 4110 1.607148 CACATGTGCCTGCCATATCAG 59.393 52.381 13.94 0.00 0.00 2.90
4100 4173 5.756195 TTGATAGCAACATCCATTAGCAC 57.244 39.130 0.00 0.00 0.00 4.40
4121 4194 1.379527 GCCCTTCCACTTACGGAATG 58.620 55.000 0.00 0.00 44.06 2.67
4270 4344 7.290014 TGTTCCTTAAGATATAGCACCATCTGA 59.710 37.037 3.36 0.00 31.87 3.27
4280 4354 2.360483 AGCACCATCTGACTGATCTACG 59.640 50.000 0.00 0.00 32.05 3.51
4288 4362 4.207955 TCTGACTGATCTACGCCTGTTAT 58.792 43.478 0.00 0.00 0.00 1.89
4302 4376 3.848726 CCTGTTATGTTTGGCATGGTTC 58.151 45.455 0.00 0.00 38.47 3.62
4424 4498 8.387354 TGTCTATTTTATGCATGTCGTTTGTAG 58.613 33.333 10.16 1.63 0.00 2.74
4433 4507 4.378356 GCATGTCGTTTGTAGCTTTGATCA 60.378 41.667 0.00 0.00 0.00 2.92
4435 4509 5.281693 TGTCGTTTGTAGCTTTGATCATG 57.718 39.130 0.00 0.00 0.00 3.07
4544 4618 6.857777 AGTATAATTGATGTTGCTCTGAGC 57.142 37.500 22.38 22.38 42.82 4.26
4568 4642 6.574269 GCAAAGGCTTCCAGGTATTATTTGTT 60.574 38.462 0.00 0.00 36.96 2.83
4574 4648 7.505923 GGCTTCCAGGTATTATTTGTTAATCCT 59.494 37.037 0.00 0.00 32.53 3.24
4659 4733 5.496556 TGGCAGTTAACTATAGCATTGTGT 58.503 37.500 8.04 0.00 0.00 3.72
4666 4740 9.618890 AGTTAACTATAGCATTGTGTGATGAAT 57.381 29.630 6.26 0.00 0.00 2.57
4717 4791 6.745116 AGTGGTAAACTGGTAATTGCTTTTC 58.255 36.000 0.00 0.00 37.88 2.29
4938 5026 6.768029 TTATCTTTTTGTGCAGTGCATTTC 57.232 33.333 22.87 9.29 41.91 2.17
4941 5029 2.798976 TTTGTGCAGTGCATTTCTCC 57.201 45.000 22.87 7.69 41.91 3.71
4951 5039 5.124457 GCAGTGCATTTCTCCTTAAGATTCA 59.876 40.000 11.09 0.00 32.82 2.57
4954 5042 8.896744 CAGTGCATTTCTCCTTAAGATTCATAA 58.103 33.333 3.36 0.00 32.82 1.90
4987 5075 8.975439 GGTACGTTTTAACATCTATATGTGGAG 58.025 37.037 0.00 0.00 45.79 3.86
5023 5111 6.105333 AGCTTGTAAATGCACTTTGTGAAAA 58.895 32.000 1.52 0.00 35.23 2.29
5068 5156 1.470051 TTAGGAGCCAAAAATCCGCC 58.530 50.000 0.00 0.00 40.73 6.13
5223 5316 2.093658 GGCGTGGATCCAAGTAGAAGAA 60.094 50.000 25.73 0.00 0.00 2.52
5267 5360 6.881065 ACTGCTACTGAAAATATCTGAAAGCA 59.119 34.615 12.45 12.45 41.81 3.91
5290 5383 7.927629 AGCATGTTGTCAAATTCTGTTTAACAT 59.072 29.630 0.00 0.00 35.90 2.71
5306 5399 9.596677 CTGTTTAACATTTTTGCATGTATTTGG 57.403 29.630 0.00 0.00 36.30 3.28
5485 5580 0.391228 TCCTAGCTGAAACGTGTGCA 59.609 50.000 0.00 0.00 0.00 4.57
5542 5637 4.608948 ACTCGGATATTCATTCCTCCAC 57.391 45.455 0.00 0.00 0.00 4.02
5560 5667 0.452184 ACGGTAGCACACGAGATCTG 59.548 55.000 0.00 0.00 0.00 2.90
5568 5675 1.126488 ACACGAGATCTGATGCCCAT 58.874 50.000 0.00 0.00 0.00 4.00
5608 5715 3.661944 CAGGATAGAGTATGCTGGCAAG 58.338 50.000 7.39 0.00 46.84 4.01
5707 5814 1.941812 CTGGACCGTGCAACTGAAC 59.058 57.895 0.00 0.00 31.75 3.18
5710 5817 1.139256 TGGACCGTGCAACTGAACTAA 59.861 47.619 0.00 0.00 31.75 2.24
5719 5826 4.739716 GTGCAACTGAACTAACCAACAATG 59.260 41.667 0.00 0.00 0.00 2.82
5734 5841 1.079875 CAATGTTTGCCTGCCATCGC 61.080 55.000 0.00 0.00 0.00 4.58
5785 5892 7.573710 TGGCCTAGACTAATAAAACATGATGT 58.426 34.615 3.32 0.00 0.00 3.06
5786 5893 7.498900 TGGCCTAGACTAATAAAACATGATGTG 59.501 37.037 3.32 0.00 0.00 3.21
5787 5894 7.499232 GGCCTAGACTAATAAAACATGATGTGT 59.501 37.037 0.00 0.00 44.84 3.72
5831 5938 6.929049 TGTGTATCTTCAGTCAGTTTTGTAGG 59.071 38.462 0.00 0.00 0.00 3.18
5832 5939 5.932303 TGTATCTTCAGTCAGTTTTGTAGGC 59.068 40.000 0.00 0.00 0.00 3.93
5833 5940 3.740115 TCTTCAGTCAGTTTTGTAGGCC 58.260 45.455 0.00 0.00 0.00 5.19
5834 5941 2.561478 TCAGTCAGTTTTGTAGGCCC 57.439 50.000 0.00 0.00 0.00 5.80
5835 5942 2.054799 TCAGTCAGTTTTGTAGGCCCT 58.945 47.619 0.00 0.00 0.00 5.19
5836 5943 2.154462 CAGTCAGTTTTGTAGGCCCTG 58.846 52.381 0.00 0.00 0.00 4.45
5839 5946 1.144913 TCAGTTTTGTAGGCCCTGCTT 59.855 47.619 0.00 0.00 0.00 3.91
6018 6129 3.694566 ACTTTCCATATCGGGTTTCTTGC 59.305 43.478 0.00 0.00 34.36 4.01
6049 6162 1.065126 AGGACATTGGAGTAGCTTGGC 60.065 52.381 0.00 0.00 0.00 4.52
6087 6207 1.573829 TAAGAGCTTGGTTTGCCGCG 61.574 55.000 0.00 0.00 37.67 6.46
6090 6210 4.700365 GCTTGGTTTGCCGCGGTC 62.700 66.667 28.70 19.46 37.67 4.79
6147 6267 2.169769 TCAAGGAGAAACACGACCTTGT 59.830 45.455 19.48 0.00 46.44 3.16
6201 6324 1.147153 GGCACTCTATCACTGCCCC 59.853 63.158 0.00 0.00 44.15 5.80
6240 6363 2.604174 CGTTTGTGCTGGACGGACC 61.604 63.158 0.00 0.00 39.54 4.46
6325 6452 8.540507 TCTAAGAGGAAATGCTATAGACTGTT 57.459 34.615 3.21 0.00 0.00 3.16
6326 6453 9.642343 TCTAAGAGGAAATGCTATAGACTGTTA 57.358 33.333 3.21 0.56 0.00 2.41
6327 6454 9.685828 CTAAGAGGAAATGCTATAGACTGTTAC 57.314 37.037 3.21 0.00 0.00 2.50
6328 6455 7.906199 AGAGGAAATGCTATAGACTGTTACT 57.094 36.000 3.21 0.00 0.00 2.24
6329 6456 7.947282 AGAGGAAATGCTATAGACTGTTACTC 58.053 38.462 3.21 6.92 0.00 2.59
6330 6457 7.014808 AGAGGAAATGCTATAGACTGTTACTCC 59.985 40.741 3.21 0.00 0.00 3.85
6331 6458 6.841755 AGGAAATGCTATAGACTGTTACTCCT 59.158 38.462 3.21 0.56 0.00 3.69
6332 6459 7.345914 AGGAAATGCTATAGACTGTTACTCCTT 59.654 37.037 3.21 0.00 0.00 3.36
6333 6460 7.988028 GGAAATGCTATAGACTGTTACTCCTTT 59.012 37.037 3.21 0.00 0.00 3.11
6334 6461 9.384764 GAAATGCTATAGACTGTTACTCCTTTT 57.615 33.333 3.21 0.00 0.00 2.27
6335 6462 8.723942 AATGCTATAGACTGTTACTCCTTTTG 57.276 34.615 3.21 0.00 0.00 2.44
6336 6463 7.241042 TGCTATAGACTGTTACTCCTTTTGT 57.759 36.000 3.21 0.00 0.00 2.83
6337 6464 7.676947 TGCTATAGACTGTTACTCCTTTTGTT 58.323 34.615 3.21 0.00 0.00 2.83
6338 6465 7.817962 TGCTATAGACTGTTACTCCTTTTGTTC 59.182 37.037 3.21 0.00 0.00 3.18
6339 6466 7.278203 GCTATAGACTGTTACTCCTTTTGTTCC 59.722 40.741 3.21 0.00 0.00 3.62
6340 6467 5.632034 AGACTGTTACTCCTTTTGTTCCT 57.368 39.130 0.00 0.00 0.00 3.36
6341 6468 6.742559 AGACTGTTACTCCTTTTGTTCCTA 57.257 37.500 0.00 0.00 0.00 2.94
6342 6469 7.133133 AGACTGTTACTCCTTTTGTTCCTAA 57.867 36.000 0.00 0.00 0.00 2.69
6343 6470 7.571025 AGACTGTTACTCCTTTTGTTCCTAAA 58.429 34.615 0.00 0.00 0.00 1.85
6344 6471 8.218488 AGACTGTTACTCCTTTTGTTCCTAAAT 58.782 33.333 0.00 0.00 0.00 1.40
6345 6472 9.498176 GACTGTTACTCCTTTTGTTCCTAAATA 57.502 33.333 0.00 0.00 0.00 1.40
6346 6473 9.281371 ACTGTTACTCCTTTTGTTCCTAAATAC 57.719 33.333 0.00 0.00 0.00 1.89
6347 6474 9.503399 CTGTTACTCCTTTTGTTCCTAAATACT 57.497 33.333 0.00 0.00 0.00 2.12
6352 6479 8.319881 ACTCCTTTTGTTCCTAAATACTACTCC 58.680 37.037 0.00 0.00 0.00 3.85
6353 6480 7.627311 TCCTTTTGTTCCTAAATACTACTCCC 58.373 38.462 0.00 0.00 0.00 4.30
6354 6481 7.460082 TCCTTTTGTTCCTAAATACTACTCCCT 59.540 37.037 0.00 0.00 0.00 4.20
6355 6482 7.769507 CCTTTTGTTCCTAAATACTACTCCCTC 59.230 40.741 0.00 0.00 0.00 4.30
6356 6483 6.803366 TTGTTCCTAAATACTACTCCCTCC 57.197 41.667 0.00 0.00 0.00 4.30
6357 6484 5.845734 TGTTCCTAAATACTACTCCCTCCA 58.154 41.667 0.00 0.00 0.00 3.86
6358 6485 6.449956 TGTTCCTAAATACTACTCCCTCCAT 58.550 40.000 0.00 0.00 0.00 3.41
6359 6486 6.906901 TGTTCCTAAATACTACTCCCTCCATT 59.093 38.462 0.00 0.00 0.00 3.16
6360 6487 7.404980 TGTTCCTAAATACTACTCCCTCCATTT 59.595 37.037 0.00 0.00 0.00 2.32
6361 6488 8.272889 GTTCCTAAATACTACTCCCTCCATTTT 58.727 37.037 0.00 0.00 0.00 1.82
6362 6489 9.510062 TTCCTAAATACTACTCCCTCCATTTTA 57.490 33.333 0.00 0.00 0.00 1.52
6363 6490 9.510062 TCCTAAATACTACTCCCTCCATTTTAA 57.490 33.333 0.00 0.00 0.00 1.52
6371 6498 7.985752 ACTACTCCCTCCATTTTAAATTACTCG 59.014 37.037 0.00 0.00 0.00 4.18
6372 6499 6.718294 ACTCCCTCCATTTTAAATTACTCGT 58.282 36.000 0.00 0.00 0.00 4.18
6373 6500 6.822170 ACTCCCTCCATTTTAAATTACTCGTC 59.178 38.462 0.00 0.00 0.00 4.20
6374 6501 6.713276 TCCCTCCATTTTAAATTACTCGTCA 58.287 36.000 0.00 0.00 0.00 4.35
6375 6502 6.596497 TCCCTCCATTTTAAATTACTCGTCAC 59.404 38.462 0.00 0.00 0.00 3.67
6376 6503 6.373216 CCCTCCATTTTAAATTACTCGTCACA 59.627 38.462 0.00 0.00 0.00 3.58
6377 6504 7.067008 CCCTCCATTTTAAATTACTCGTCACAT 59.933 37.037 0.00 0.00 0.00 3.21
6378 6505 9.104965 CCTCCATTTTAAATTACTCGTCACATA 57.895 33.333 0.00 0.00 0.00 2.29
6387 6514 8.506168 AAATTACTCGTCACATAAATGGATGT 57.494 30.769 0.00 0.00 40.78 3.06
6388 6515 9.607988 AAATTACTCGTCACATAAATGGATGTA 57.392 29.630 0.00 0.00 37.99 2.29
6389 6516 9.778741 AATTACTCGTCACATAAATGGATGTAT 57.221 29.630 0.00 0.00 37.99 2.29
6390 6517 8.812147 TTACTCGTCACATAAATGGATGTATC 57.188 34.615 0.00 0.00 37.99 2.24
6391 6518 7.055667 ACTCGTCACATAAATGGATGTATCT 57.944 36.000 0.00 0.00 37.99 1.98
6392 6519 8.178313 ACTCGTCACATAAATGGATGTATCTA 57.822 34.615 0.00 0.00 37.99 1.98
6393 6520 8.300286 ACTCGTCACATAAATGGATGTATCTAG 58.700 37.037 0.00 0.00 37.99 2.43
6394 6521 8.404107 TCGTCACATAAATGGATGTATCTAGA 57.596 34.615 0.00 0.00 37.99 2.43
6395 6522 8.856103 TCGTCACATAAATGGATGTATCTAGAA 58.144 33.333 0.00 0.00 37.99 2.10
6396 6523 9.645059 CGTCACATAAATGGATGTATCTAGAAT 57.355 33.333 0.00 0.00 37.99 2.40
6425 6552 7.825331 ATACACCTAGATACATCCATATCCG 57.175 40.000 0.00 0.00 32.76 4.18
6426 6553 4.402793 ACACCTAGATACATCCATATCCGC 59.597 45.833 0.00 0.00 32.76 5.54
6427 6554 3.632604 ACCTAGATACATCCATATCCGCG 59.367 47.826 0.00 0.00 32.76 6.46
6428 6555 3.883489 CCTAGATACATCCATATCCGCGA 59.117 47.826 8.23 0.00 32.76 5.87
6429 6556 3.784701 AGATACATCCATATCCGCGAC 57.215 47.619 8.23 0.00 32.76 5.19
6430 6557 3.089284 AGATACATCCATATCCGCGACA 58.911 45.455 8.23 0.00 32.76 4.35
6431 6558 3.509967 AGATACATCCATATCCGCGACAA 59.490 43.478 8.23 0.00 32.76 3.18
6432 6559 2.613026 ACATCCATATCCGCGACAAA 57.387 45.000 8.23 0.00 0.00 2.83
6433 6560 3.126001 ACATCCATATCCGCGACAAAT 57.874 42.857 8.23 0.00 0.00 2.32
6434 6561 4.265904 ACATCCATATCCGCGACAAATA 57.734 40.909 8.23 0.00 0.00 1.40
6435 6562 4.637276 ACATCCATATCCGCGACAAATAA 58.363 39.130 8.23 0.00 0.00 1.40
6436 6563 5.245531 ACATCCATATCCGCGACAAATAAT 58.754 37.500 8.23 0.00 0.00 1.28
6437 6564 5.705441 ACATCCATATCCGCGACAAATAATT 59.295 36.000 8.23 0.00 0.00 1.40
6438 6565 5.856126 TCCATATCCGCGACAAATAATTC 57.144 39.130 8.23 0.00 0.00 2.17
6439 6566 4.387559 TCCATATCCGCGACAAATAATTCG 59.612 41.667 8.23 0.00 38.31 3.34
6440 6567 4.435518 CCATATCCGCGACAAATAATTCGG 60.436 45.833 8.23 0.00 35.73 4.30
6441 6568 2.296831 TCCGCGACAAATAATTCGGA 57.703 45.000 8.23 0.00 42.86 4.55
6442 6569 2.619147 TCCGCGACAAATAATTCGGAA 58.381 42.857 8.23 0.00 42.25 4.30
6443 6570 2.349275 TCCGCGACAAATAATTCGGAAC 59.651 45.455 8.23 0.00 42.25 3.62
6461 6588 4.468713 GGAACGGAGGGAGTAGTATAAGT 58.531 47.826 0.00 0.00 0.00 2.24
6462 6589 4.518590 GGAACGGAGGGAGTAGTATAAGTC 59.481 50.000 0.00 0.00 0.00 3.01
6463 6590 5.375773 GAACGGAGGGAGTAGTATAAGTCT 58.624 45.833 0.00 0.00 0.00 3.24
6464 6591 5.385628 ACGGAGGGAGTAGTATAAGTCTT 57.614 43.478 0.00 0.00 0.00 3.01
6465 6592 5.764432 ACGGAGGGAGTAGTATAAGTCTTT 58.236 41.667 0.00 0.00 0.00 2.52
6466 6593 5.593502 ACGGAGGGAGTAGTATAAGTCTTTG 59.406 44.000 0.00 0.00 0.00 2.77
6467 6594 5.826737 CGGAGGGAGTAGTATAAGTCTTTGA 59.173 44.000 0.00 0.00 0.00 2.69
6468 6595 6.320672 CGGAGGGAGTAGTATAAGTCTTTGAA 59.679 42.308 0.00 0.00 0.00 2.69
6469 6596 7.147949 CGGAGGGAGTAGTATAAGTCTTTGAAA 60.148 40.741 0.00 0.00 0.00 2.69
6470 6597 8.537858 GGAGGGAGTAGTATAAGTCTTTGAAAA 58.462 37.037 0.00 0.00 0.00 2.29
6496 6623 5.578005 TCCACTATGAACTACTTCCTTCG 57.422 43.478 0.00 0.00 0.00 3.79
6497 6624 5.014858 TCCACTATGAACTACTTCCTTCGT 58.985 41.667 0.00 0.00 0.00 3.85
6498 6625 5.479375 TCCACTATGAACTACTTCCTTCGTT 59.521 40.000 0.00 0.00 0.00 3.85
6499 6626 5.805994 CCACTATGAACTACTTCCTTCGTTC 59.194 44.000 0.00 0.00 37.02 3.95
6500 6627 5.805994 CACTATGAACTACTTCCTTCGTTCC 59.194 44.000 0.00 0.00 35.97 3.62
6501 6628 5.715753 ACTATGAACTACTTCCTTCGTTCCT 59.284 40.000 0.00 0.00 35.97 3.36
6502 6629 6.888632 ACTATGAACTACTTCCTTCGTTCCTA 59.111 38.462 0.00 0.00 35.97 2.94
6503 6630 6.600882 ATGAACTACTTCCTTCGTTCCTAA 57.399 37.500 0.00 0.00 35.97 2.69
6504 6631 6.409524 TGAACTACTTCCTTCGTTCCTAAA 57.590 37.500 0.00 0.00 35.97 1.85
6505 6632 7.001099 TGAACTACTTCCTTCGTTCCTAAAT 57.999 36.000 0.00 0.00 35.97 1.40
6506 6633 8.125978 TGAACTACTTCCTTCGTTCCTAAATA 57.874 34.615 0.00 0.00 35.97 1.40
6507 6634 8.755977 TGAACTACTTCCTTCGTTCCTAAATAT 58.244 33.333 0.00 0.00 35.97 1.28
6508 6635 9.597170 GAACTACTTCCTTCGTTCCTAAATATT 57.403 33.333 0.00 0.00 31.89 1.28
6509 6636 9.955102 AACTACTTCCTTCGTTCCTAAATATTT 57.045 29.630 5.89 5.89 0.00 1.40
6510 6637 9.379791 ACTACTTCCTTCGTTCCTAAATATTTG 57.620 33.333 11.05 1.40 0.00 2.32
6511 6638 9.379791 CTACTTCCTTCGTTCCTAAATATTTGT 57.620 33.333 11.05 0.00 0.00 2.83
6512 6639 8.265165 ACTTCCTTCGTTCCTAAATATTTGTC 57.735 34.615 11.05 0.00 0.00 3.18
6513 6640 8.101419 ACTTCCTTCGTTCCTAAATATTTGTCT 58.899 33.333 11.05 0.00 0.00 3.41
6514 6641 8.857694 TTCCTTCGTTCCTAAATATTTGTCTT 57.142 30.769 11.05 0.00 0.00 3.01
6515 6642 8.857694 TCCTTCGTTCCTAAATATTTGTCTTT 57.142 30.769 11.05 0.00 0.00 2.52
6516 6643 8.943002 TCCTTCGTTCCTAAATATTTGTCTTTC 58.057 33.333 11.05 0.00 0.00 2.62
6517 6644 8.947115 CCTTCGTTCCTAAATATTTGTCTTTCT 58.053 33.333 11.05 0.00 0.00 2.52
6590 6717 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
6591 6718 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
6592 6719 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
6593 6720 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
6594 6721 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
6595 6722 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
6596 6723 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
6597 6724 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
6598 6725 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
6599 6726 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
6600 6727 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
6601 6728 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
6602 6729 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
6603 6730 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
6604 6731 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
6605 6732 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
6606 6733 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
6607 6734 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
6608 6735 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
6609 6736 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
6610 6737 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
6611 6738 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
6612 6739 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
6613 6740 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
6614 6741 6.367695 TCCGTATGTAGTCACTTGTTGAAATG 59.632 38.462 0.00 0.00 35.39 2.32
6615 6742 6.147164 CCGTATGTAGTCACTTGTTGAAATGT 59.853 38.462 0.00 0.00 35.39 2.71
6616 6743 7.227461 CGTATGTAGTCACTTGTTGAAATGTC 58.773 38.462 0.00 0.00 35.39 3.06
6617 6744 7.116376 CGTATGTAGTCACTTGTTGAAATGTCT 59.884 37.037 0.00 0.00 35.39 3.41
6618 6745 9.419297 GTATGTAGTCACTTGTTGAAATGTCTA 57.581 33.333 0.00 0.00 35.39 2.59
6619 6746 7.946655 TGTAGTCACTTGTTGAAATGTCTAG 57.053 36.000 0.00 0.00 35.39 2.43
6620 6747 7.722363 TGTAGTCACTTGTTGAAATGTCTAGA 58.278 34.615 0.00 0.00 35.39 2.43
6621 6748 8.201464 TGTAGTCACTTGTTGAAATGTCTAGAA 58.799 33.333 0.00 0.00 35.39 2.10
6622 6749 9.042008 GTAGTCACTTGTTGAAATGTCTAGAAA 57.958 33.333 0.00 0.00 35.39 2.52
6623 6750 8.147642 AGTCACTTGTTGAAATGTCTAGAAAG 57.852 34.615 0.00 0.00 35.39 2.62
6624 6751 7.987458 AGTCACTTGTTGAAATGTCTAGAAAGA 59.013 33.333 0.00 0.00 35.39 2.52
6625 6752 8.064814 GTCACTTGTTGAAATGTCTAGAAAGAC 58.935 37.037 0.00 0.00 43.53 3.01
6640 6767 7.769220 TCTAGAAAGACAAGTATTTAGGGACG 58.231 38.462 0.00 0.00 0.00 4.79
6641 6768 5.731591 AGAAAGACAAGTATTTAGGGACGG 58.268 41.667 0.00 0.00 0.00 4.79
6642 6769 5.482878 AGAAAGACAAGTATTTAGGGACGGA 59.517 40.000 0.00 0.00 0.00 4.69
6643 6770 5.340439 AAGACAAGTATTTAGGGACGGAG 57.660 43.478 0.00 0.00 0.00 4.63
6644 6771 3.705072 AGACAAGTATTTAGGGACGGAGG 59.295 47.826 0.00 0.00 0.00 4.30
6645 6772 2.770232 ACAAGTATTTAGGGACGGAGGG 59.230 50.000 0.00 0.00 0.00 4.30
6646 6773 3.036091 CAAGTATTTAGGGACGGAGGGA 58.964 50.000 0.00 0.00 0.00 4.20
6647 6774 2.960163 AGTATTTAGGGACGGAGGGAG 58.040 52.381 0.00 0.00 0.00 4.30
6648 6775 1.343789 GTATTTAGGGACGGAGGGAGC 59.656 57.143 0.00 0.00 0.00 4.70
6649 6776 0.326238 ATTTAGGGACGGAGGGAGCA 60.326 55.000 0.00 0.00 0.00 4.26
6650 6777 1.262640 TTTAGGGACGGAGGGAGCAC 61.263 60.000 0.00 0.00 0.00 4.40
6651 6778 2.449967 TTAGGGACGGAGGGAGCACA 62.450 60.000 0.00 0.00 0.00 4.57
6652 6779 2.238319 TAGGGACGGAGGGAGCACAT 62.238 60.000 0.00 0.00 0.00 3.21
6653 6780 1.760875 GGGACGGAGGGAGCACATA 60.761 63.158 0.00 0.00 0.00 2.29
6654 6781 1.122019 GGGACGGAGGGAGCACATAT 61.122 60.000 0.00 0.00 0.00 1.78
6655 6782 0.034059 GGACGGAGGGAGCACATATG 59.966 60.000 0.00 0.00 0.00 1.78
6656 6783 1.040646 GACGGAGGGAGCACATATGA 58.959 55.000 10.38 0.00 0.00 2.15
6657 6784 1.412710 GACGGAGGGAGCACATATGAA 59.587 52.381 10.38 0.00 0.00 2.57
6658 6785 1.414181 ACGGAGGGAGCACATATGAAG 59.586 52.381 10.38 2.58 0.00 3.02
6659 6786 1.875576 CGGAGGGAGCACATATGAAGC 60.876 57.143 10.38 12.79 0.00 3.86
6660 6787 1.141657 GGAGGGAGCACATATGAAGCA 59.858 52.381 20.98 0.00 0.00 3.91
6661 6788 2.421952 GGAGGGAGCACATATGAAGCAA 60.422 50.000 20.98 0.00 0.00 3.91
6662 6789 3.282021 GAGGGAGCACATATGAAGCAAA 58.718 45.455 20.98 0.00 0.00 3.68
6663 6790 3.696051 GAGGGAGCACATATGAAGCAAAA 59.304 43.478 20.98 0.00 0.00 2.44
6664 6791 4.284178 AGGGAGCACATATGAAGCAAAAT 58.716 39.130 20.98 6.07 0.00 1.82
6665 6792 4.098960 AGGGAGCACATATGAAGCAAAATG 59.901 41.667 20.98 4.91 0.00 2.32
6666 6793 4.098349 GGGAGCACATATGAAGCAAAATGA 59.902 41.667 20.98 0.00 0.00 2.57
6667 6794 5.279384 GGAGCACATATGAAGCAAAATGAG 58.721 41.667 20.98 0.00 0.00 2.90
6668 6795 4.679662 AGCACATATGAAGCAAAATGAGC 58.320 39.130 20.98 0.00 36.55 4.26
6669 6796 3.484649 GCACATATGAAGCAAAATGAGCG 59.515 43.478 10.38 0.00 37.01 5.03
6670 6797 4.731483 GCACATATGAAGCAAAATGAGCGA 60.731 41.667 10.38 0.00 37.01 4.93
6671 6798 5.334319 CACATATGAAGCAAAATGAGCGAA 58.666 37.500 10.38 0.00 37.01 4.70
6672 6799 5.975344 CACATATGAAGCAAAATGAGCGAAT 59.025 36.000 10.38 0.00 37.01 3.34
6673 6800 6.141844 CACATATGAAGCAAAATGAGCGAATC 59.858 38.462 10.38 0.00 37.01 2.52
6674 6801 4.978083 ATGAAGCAAAATGAGCGAATCT 57.022 36.364 0.00 0.00 37.01 2.40
6675 6802 7.227314 ACATATGAAGCAAAATGAGCGAATCTA 59.773 33.333 10.38 0.00 37.01 1.98
6676 6803 5.221891 TGAAGCAAAATGAGCGAATCTAC 57.778 39.130 0.00 0.00 37.01 2.59
6677 6804 4.694982 TGAAGCAAAATGAGCGAATCTACA 59.305 37.500 0.00 0.00 37.01 2.74
6678 6805 4.606457 AGCAAAATGAGCGAATCTACAC 57.394 40.909 0.00 0.00 37.01 2.90
6679 6806 4.256920 AGCAAAATGAGCGAATCTACACT 58.743 39.130 0.00 0.00 37.01 3.55
6680 6807 4.331168 AGCAAAATGAGCGAATCTACACTC 59.669 41.667 0.00 0.00 37.01 3.51
6681 6808 4.331168 GCAAAATGAGCGAATCTACACTCT 59.669 41.667 0.00 0.00 0.00 3.24
6682 6809 5.520288 GCAAAATGAGCGAATCTACACTCTA 59.480 40.000 0.00 0.00 0.00 2.43
6683 6810 6.036083 GCAAAATGAGCGAATCTACACTCTAA 59.964 38.462 0.00 0.00 0.00 2.10
6684 6811 7.413000 GCAAAATGAGCGAATCTACACTCTAAA 60.413 37.037 0.00 0.00 0.00 1.85
6685 6812 8.443160 CAAAATGAGCGAATCTACACTCTAAAA 58.557 33.333 0.00 0.00 0.00 1.52
6686 6813 8.723942 AAATGAGCGAATCTACACTCTAAAAT 57.276 30.769 0.00 0.00 0.00 1.82
6687 6814 7.706281 ATGAGCGAATCTACACTCTAAAATG 57.294 36.000 0.00 0.00 0.00 2.32
6688 6815 5.520288 TGAGCGAATCTACACTCTAAAATGC 59.480 40.000 0.00 0.00 0.00 3.56
6689 6816 5.419542 AGCGAATCTACACTCTAAAATGCA 58.580 37.500 0.00 0.00 0.00 3.96
6690 6817 6.051717 AGCGAATCTACACTCTAAAATGCAT 58.948 36.000 0.00 0.00 0.00 3.96
6691 6818 6.201806 AGCGAATCTACACTCTAAAATGCATC 59.798 38.462 0.00 0.00 0.00 3.91
6692 6819 6.201806 GCGAATCTACACTCTAAAATGCATCT 59.798 38.462 0.00 0.00 0.00 2.90
6693 6820 7.382488 GCGAATCTACACTCTAAAATGCATCTA 59.618 37.037 0.00 0.00 0.00 1.98
6694 6821 8.695284 CGAATCTACACTCTAAAATGCATCTAC 58.305 37.037 0.00 0.00 0.00 2.59
6695 6822 9.534565 GAATCTACACTCTAAAATGCATCTACA 57.465 33.333 0.00 0.00 0.00 2.74
6827 6954 3.313257 GCGACGTAGCTAGCACGC 61.313 66.667 27.89 23.97 43.10 5.34
6834 6961 1.546834 GTAGCTAGCACGCAGTACAC 58.453 55.000 18.83 0.00 41.61 2.90
6836 6963 2.158959 GCTAGCACGCAGTACACGG 61.159 63.158 10.63 3.66 41.61 4.94
6837 6964 2.126228 TAGCACGCAGTACACGGC 60.126 61.111 12.18 11.63 41.61 5.68
6838 6965 3.636313 TAGCACGCAGTACACGGCC 62.636 63.158 12.18 0.00 41.61 6.13
6841 6968 2.125673 ACGCAGTACACGGCCATC 60.126 61.111 2.24 0.00 41.94 3.51
6843 6970 1.521457 CGCAGTACACGGCCATCAT 60.521 57.895 2.24 0.00 33.45 2.45
6844 6971 1.490693 CGCAGTACACGGCCATCATC 61.491 60.000 2.24 0.00 33.45 2.92
6853 6980 2.418976 CACGGCCATCATCATCATCATC 59.581 50.000 2.24 0.00 0.00 2.92
6854 6981 2.039348 ACGGCCATCATCATCATCATCA 59.961 45.455 2.24 0.00 0.00 3.07
6855 6982 2.418976 CGGCCATCATCATCATCATCAC 59.581 50.000 2.24 0.00 0.00 3.06
6856 6983 2.753452 GGCCATCATCATCATCATCACC 59.247 50.000 0.00 0.00 0.00 4.02
6857 6984 3.418047 GCCATCATCATCATCATCACCA 58.582 45.455 0.00 0.00 0.00 4.17
6868 6995 4.219919 TCATCATCACCATCATGCCAAAT 58.780 39.130 0.00 0.00 0.00 2.32
6907 7034 0.944386 ACTTTTGCCTACGTGCACTG 59.056 50.000 16.19 11.05 41.88 3.66
6922 7049 2.792543 CTGCAAACGCGCTTGTCG 60.793 61.111 21.96 10.56 42.12 4.35
6929 7056 0.239347 AACGCGCTTGTCGTACTACT 59.761 50.000 5.73 0.00 39.48 2.57
6940 7074 3.118482 TGTCGTACTACTCCACCCTCTAG 60.118 52.174 0.00 0.00 0.00 2.43
6957 7091 0.530744 TAGCTCGGTGTTAGCCAGTG 59.469 55.000 0.00 0.00 41.02 3.66
7015 7149 1.489574 CGCTGCATTTTGCTTTGTCA 58.510 45.000 0.00 0.00 45.31 3.58
7016 7150 1.859703 CGCTGCATTTTGCTTTGTCAA 59.140 42.857 0.00 0.00 45.31 3.18
7017 7151 2.347846 CGCTGCATTTTGCTTTGTCAAC 60.348 45.455 0.00 0.00 45.31 3.18
7018 7152 2.032636 GCTGCATTTTGCTTTGTCAACC 60.033 45.455 0.00 0.00 45.31 3.77
7052 7189 5.798015 TTTTTAACACAGTACAGACGCAA 57.202 34.783 0.00 0.00 0.00 4.85
7053 7190 5.798015 TTTTAACACAGTACAGACGCAAA 57.202 34.783 0.00 0.00 0.00 3.68
7054 7191 4.782252 TTAACACAGTACAGACGCAAAC 57.218 40.909 0.00 0.00 0.00 2.93
7056 7193 0.111266 CACAGTACAGACGCAAACGC 60.111 55.000 0.00 0.00 45.53 4.84
7057 7194 0.249322 ACAGTACAGACGCAAACGCT 60.249 50.000 0.00 0.00 45.53 5.07
7058 7195 0.435008 CAGTACAGACGCAAACGCTC 59.565 55.000 0.00 0.00 45.53 5.03
7059 7196 0.031585 AGTACAGACGCAAACGCTCA 59.968 50.000 0.00 0.00 45.53 4.26
7060 7197 1.068474 GTACAGACGCAAACGCTCAT 58.932 50.000 0.00 0.00 45.53 2.90
7061 7198 2.094906 AGTACAGACGCAAACGCTCATA 60.095 45.455 0.00 0.00 45.53 2.15
7062 7199 2.010145 ACAGACGCAAACGCTCATAT 57.990 45.000 0.00 0.00 45.53 1.78
7063 7200 3.159353 ACAGACGCAAACGCTCATATA 57.841 42.857 0.00 0.00 45.53 0.86
7064 7201 3.517602 ACAGACGCAAACGCTCATATAA 58.482 40.909 0.00 0.00 45.53 0.98
7065 7202 3.930229 ACAGACGCAAACGCTCATATAAA 59.070 39.130 0.00 0.00 45.53 1.40
7066 7203 4.201685 ACAGACGCAAACGCTCATATAAAC 60.202 41.667 0.00 0.00 45.53 2.01
7067 7204 3.930229 AGACGCAAACGCTCATATAAACA 59.070 39.130 0.00 0.00 45.53 2.83
7068 7205 3.998522 ACGCAAACGCTCATATAAACAC 58.001 40.909 0.00 0.00 45.53 3.32
7069 7206 3.019589 CGCAAACGCTCATATAAACACG 58.980 45.455 0.00 0.00 0.00 4.49
7070 7207 3.482923 CGCAAACGCTCATATAAACACGT 60.483 43.478 0.00 0.00 34.85 4.49
7071 7208 4.259490 CGCAAACGCTCATATAAACACGTA 60.259 41.667 0.00 0.00 32.76 3.57
7072 7209 5.555631 CGCAAACGCTCATATAAACACGTAT 60.556 40.000 0.00 0.00 32.76 3.06
7073 7210 6.345172 CGCAAACGCTCATATAAACACGTATA 60.345 38.462 0.00 0.00 32.76 1.47
7074 7211 6.784227 GCAAACGCTCATATAAACACGTATAC 59.216 38.462 0.00 0.00 32.76 1.47
7075 7212 7.515528 GCAAACGCTCATATAAACACGTATACA 60.516 37.037 3.32 0.00 32.76 2.29
7076 7213 6.981379 ACGCTCATATAAACACGTATACAC 57.019 37.500 3.32 0.00 31.03 2.90
7077 7214 6.732154 ACGCTCATATAAACACGTATACACT 58.268 36.000 3.32 0.00 31.03 3.55
7078 7215 6.854892 ACGCTCATATAAACACGTATACACTC 59.145 38.462 3.32 0.00 31.03 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 39 6.599638 GGAATAAAGAGGTATTCTGCACTGTT 59.400 38.462 5.25 0.00 39.47 3.16
312 344 5.892119 TCTTCCTCATATGTACCGAGTTCTT 59.108 40.000 1.90 0.00 0.00 2.52
327 359 4.723309 GGCATTATGTTCCTCTTCCTCAT 58.277 43.478 0.00 0.00 0.00 2.90
673 707 8.756486 AAACCTCTTACCAAAACTAAAGCTTA 57.244 30.769 0.00 0.00 0.00 3.09
686 720 2.312390 GGGCAACAAAACCTCTTACCA 58.688 47.619 0.00 0.00 39.74 3.25
719 754 8.851541 TTTTCGATTACACCTAGTTAAATGGT 57.148 30.769 0.00 0.00 33.87 3.55
750 785 5.969435 GTGCATTACTACGGGCTTTTAATTC 59.031 40.000 0.00 0.00 0.00 2.17
767 802 3.691118 ACTAGTAGAACGTCCGTGCATTA 59.309 43.478 3.59 0.00 0.00 1.90
777 812 7.224522 AGTTTTATCCACACTAGTAGAACGT 57.775 36.000 3.59 0.00 0.00 3.99
828 863 3.643792 TGGATAACCAAACCAAAACAGGG 59.356 43.478 0.00 0.00 43.91 4.45
831 866 3.964031 AGCTGGATAACCAAACCAAAACA 59.036 39.130 0.00 0.00 46.32 2.83
832 867 4.038642 TCAGCTGGATAACCAAACCAAAAC 59.961 41.667 15.13 0.00 46.32 2.43
833 868 4.219115 TCAGCTGGATAACCAAACCAAAA 58.781 39.130 15.13 0.00 46.32 2.44
834 869 3.838565 TCAGCTGGATAACCAAACCAAA 58.161 40.909 15.13 0.00 46.32 3.28
835 870 3.517296 TCAGCTGGATAACCAAACCAA 57.483 42.857 15.13 0.00 46.32 3.67
838 873 3.364964 CGTGTTCAGCTGGATAACCAAAC 60.365 47.826 15.13 8.71 46.32 2.93
856 891 0.106708 TCTTTGCTGCCTTCTCGTGT 59.893 50.000 0.00 0.00 0.00 4.49
866 901 0.235926 GTGACTCCGTTCTTTGCTGC 59.764 55.000 0.00 0.00 0.00 5.25
943 978 3.112709 GCACGCAGAACCTCCGTC 61.113 66.667 0.00 0.00 32.18 4.79
979 1014 1.369448 CGAGTGCTAGATCGGACGC 60.369 63.158 0.00 0.00 35.33 5.19
990 1025 2.678956 GGAGACGACGACGAGTGCT 61.679 63.158 15.32 5.45 42.66 4.40
1111 1146 2.682352 CCGCAATCCATGTTGTATGACA 59.318 45.455 0.00 0.00 0.00 3.58
1112 1147 2.541588 GCCGCAATCCATGTTGTATGAC 60.542 50.000 0.00 0.00 0.00 3.06
1116 1151 0.808125 GTGCCGCAATCCATGTTGTA 59.192 50.000 0.00 0.00 0.00 2.41
1222 1257 2.441375 TGAACAAGGACCTGAATGGACA 59.559 45.455 0.00 0.00 39.71 4.02
1298 1333 4.582701 GCTGATTAGCTCTGCTCTCTAA 57.417 45.455 1.49 0.00 46.57 2.10
1327 1362 3.129287 ACTTTCCCATCAAATCGCACATC 59.871 43.478 0.00 0.00 0.00 3.06
1338 1373 6.239743 GGTTTTTAATCCCAACTTTCCCATCA 60.240 38.462 0.00 0.00 0.00 3.07
1372 1408 7.062957 ACTTTCAGAAATCCTTTCCAAAGAGA 58.937 34.615 18.94 0.00 39.80 3.10
1373 1409 7.282332 ACTTTCAGAAATCCTTTCCAAAGAG 57.718 36.000 18.94 7.07 39.80 2.85
1621 1657 3.326747 GCAGTGGTACAGTCTAACAAGG 58.673 50.000 0.00 0.00 41.96 3.61
1655 1691 3.615496 CAGATTAGCACAAGCAAATTGGC 59.385 43.478 0.00 0.00 43.68 4.52
1673 1709 2.502947 TGCCACAGACAATCTAGCAGAT 59.497 45.455 0.00 0.00 36.28 2.90
1690 1726 0.749818 ACACGACCAACACATTGCCA 60.750 50.000 0.00 0.00 34.17 4.92
1734 1770 3.368571 GTCTGCCTGCCAAGCCAC 61.369 66.667 0.00 0.00 0.00 5.01
1979 2015 5.942826 AGAACAAGAAGATTTAGGCCTTCAG 59.057 40.000 12.58 0.41 40.78 3.02
2214 2250 7.014615 GGCAATGACCCAACATTTTAGATAGAT 59.985 37.037 0.00 0.00 38.25 1.98
2238 2274 2.026641 ACAATGACATGGCACTATGGC 58.973 47.619 1.45 0.00 44.03 4.40
2266 2302 2.582728 TGGCAAATGATCAAATCGCC 57.417 45.000 17.36 17.36 38.56 5.54
2282 2318 4.768968 ACCTGGATGCATAAGATATTTGGC 59.231 41.667 0.00 0.00 0.00 4.52
2342 2378 0.613853 CCCCACTTCCCACGAGTAGA 60.614 60.000 0.00 0.00 0.00 2.59
2450 2486 6.927294 AAGTAGTGGACAAAGAAGTTCAAG 57.073 37.500 5.50 0.00 0.00 3.02
2587 2623 9.471084 GGCAAAAACAGTACTACAAATAAATGT 57.529 29.630 0.00 0.00 37.32 2.71
2983 3019 9.617523 AAGCCCCAAATCATCAAATAAAAATAG 57.382 29.630 0.00 0.00 0.00 1.73
3003 3040 4.098807 TGAACTTTAAACACTGAAAGCCCC 59.901 41.667 0.00 0.00 37.60 5.80
3156 3195 7.761249 CCACTTTGAAAAATATCTCCAATGACC 59.239 37.037 0.00 0.00 0.00 4.02
3209 3248 7.905493 CGAGAGATTTAAAGGTTAAAGATGCAC 59.095 37.037 0.00 0.00 0.00 4.57
3220 3259 6.837471 AGTGACTACGAGAGATTTAAAGGT 57.163 37.500 0.00 0.00 0.00 3.50
3416 3487 8.079809 CACAATTTAAACAACCGGAAGATAGTT 58.920 33.333 9.46 0.00 0.00 2.24
3522 3593 8.707839 GCAGAGAAGATAGCATAAGATGTTTAC 58.292 37.037 0.00 0.00 0.00 2.01
3533 3604 6.245890 ACCTTTTAGCAGAGAAGATAGCAT 57.754 37.500 0.00 0.00 0.00 3.79
3878 3949 8.728088 AAGCAAAATATGTTAAAGTTCGAGTG 57.272 30.769 0.00 0.00 0.00 3.51
3889 3960 7.233389 TGTGCCCTTTAAGCAAAATATGTTA 57.767 32.000 0.00 0.00 43.02 2.41
3893 3964 7.167535 ACAAATGTGCCCTTTAAGCAAAATAT 58.832 30.769 0.00 0.00 43.02 1.28
3912 3983 8.844441 TTCCTTTTACGTACAAAAGACAAATG 57.156 30.769 20.19 6.90 44.68 2.32
4037 4110 6.639563 ACCATAATGTTTTGGTTTCCATAGC 58.360 36.000 2.55 0.00 43.73 2.97
4100 4173 2.125269 CCGTAAGTGGAAGGGCCG 60.125 66.667 0.00 0.00 40.66 6.13
4270 4344 4.737855 AACATAACAGGCGTAGATCAGT 57.262 40.909 0.00 0.00 0.00 3.41
4302 4376 5.941555 AGAAACCAAGGTGATAGGTAGAG 57.058 43.478 0.00 0.00 34.63 2.43
4397 4471 7.761409 ACAAACGACATGCATAAAATAGACAT 58.239 30.769 0.00 0.00 0.00 3.06
4424 4498 6.423001 AGCAAGAAAAGAAACATGATCAAAGC 59.577 34.615 0.00 0.00 0.00 3.51
4433 4507 7.154656 GGTCCAAATAGCAAGAAAAGAAACAT 58.845 34.615 0.00 0.00 0.00 2.71
4435 4509 6.512297 TGGTCCAAATAGCAAGAAAAGAAAC 58.488 36.000 0.00 0.00 0.00 2.78
4544 4618 6.530019 ACAAATAATACCTGGAAGCCTTTG 57.470 37.500 0.00 7.38 0.00 2.77
4594 4668 3.120338 ACAAACTGATCGGCAACATAACG 60.120 43.478 0.00 0.00 0.00 3.18
4659 4733 9.836864 ACACTTAAATATGCTCACTATTCATCA 57.163 29.630 0.00 0.00 0.00 3.07
4666 4740 7.147724 ACCTAGCACACTTAAATATGCTCACTA 60.148 37.037 0.00 0.00 45.11 2.74
4717 4791 2.843113 GGGATCCTGGAGATTGGGATAG 59.157 54.545 12.58 0.00 39.63 2.08
4787 4865 6.409234 CCTCCTCCAATATACAGCTGGTTTTA 60.409 42.308 19.93 0.87 0.00 1.52
4791 4869 2.975489 CCTCCTCCAATATACAGCTGGT 59.025 50.000 19.93 8.94 0.00 4.00
4792 4870 3.242867 TCCTCCTCCAATATACAGCTGG 58.757 50.000 19.93 0.00 0.00 4.85
4938 5026 6.992715 ACCGTGGATTTATGAATCTTAAGGAG 59.007 38.462 18.35 4.81 41.18 3.69
4941 5029 7.437267 ACGTACCGTGGATTTATGAATCTTAAG 59.563 37.037 9.80 0.00 39.18 1.85
4951 5039 7.550196 AGATGTTAAAACGTACCGTGGATTTAT 59.450 33.333 0.00 0.00 39.99 1.40
4954 5042 5.240121 AGATGTTAAAACGTACCGTGGATT 58.760 37.500 0.00 0.00 39.99 3.01
5023 5111 8.149631 ACCCCAGTGATCATTTATTTTGAAAT 57.850 30.769 0.00 0.00 0.00 2.17
5068 5156 3.543680 ACATGGATGTTCCTAACGAGG 57.456 47.619 0.00 0.00 37.90 4.63
5111 5204 5.414789 TCATTCATAACGGAAGGTGAAGA 57.585 39.130 0.00 0.00 35.60 2.87
5187 5280 0.535335 ACGCCGCTAGGAGAAATGAA 59.465 50.000 0.00 0.00 39.96 2.57
5223 5316 5.300286 AGCAGTTTCAGAACAGTATTTTGCT 59.700 36.000 0.00 0.00 38.26 3.91
5290 5383 7.630242 TCCAAAAACCAAATACATGCAAAAA 57.370 28.000 0.00 0.00 0.00 1.94
5306 5399 1.535896 GCTCCTCGACCTTCCAAAAAC 59.464 52.381 0.00 0.00 0.00 2.43
5485 5580 8.112183 AGACAAGTTGGATTTTGATCTAAGGAT 58.888 33.333 7.96 0.00 34.45 3.24
5542 5637 0.733150 TCAGATCTCGTGTGCTACCG 59.267 55.000 0.00 0.00 0.00 4.02
5568 5675 0.102844 GCAAAGCACAAGCCAGTGAA 59.897 50.000 10.06 0.00 42.05 3.18
5707 5814 3.059166 GCAGGCAAACATTGTTGGTTAG 58.941 45.455 2.13 0.00 29.51 2.34
5710 5817 0.106521 GGCAGGCAAACATTGTTGGT 59.893 50.000 2.13 0.00 0.00 3.67
5719 5826 4.481112 CGGCGATGGCAGGCAAAC 62.481 66.667 0.00 0.00 42.47 2.93
5753 5860 7.668052 TGTTTTATTAGTCTAGGCCAACAACAT 59.332 33.333 5.01 0.00 0.00 2.71
5758 5865 7.859325 TCATGTTTTATTAGTCTAGGCCAAC 57.141 36.000 5.01 0.00 0.00 3.77
5760 5867 7.498900 CACATCATGTTTTATTAGTCTAGGCCA 59.501 37.037 5.01 0.00 0.00 5.36
5785 5892 0.539438 GACCTTGCAACCCCATCACA 60.539 55.000 0.00 0.00 0.00 3.58
5786 5893 0.251341 AGACCTTGCAACCCCATCAC 60.251 55.000 0.00 0.00 0.00 3.06
5787 5894 0.482446 AAGACCTTGCAACCCCATCA 59.518 50.000 0.00 0.00 0.00 3.07
5831 5938 2.359975 ACGCCACTTAAGCAGGGC 60.360 61.111 18.58 18.58 42.98 5.19
5832 5939 1.745489 GGACGCCACTTAAGCAGGG 60.745 63.158 14.44 11.03 0.00 4.45
5833 5940 1.745489 GGGACGCCACTTAAGCAGG 60.745 63.158 1.29 6.29 0.00 4.85
5834 5941 1.003839 TGGGACGCCACTTAAGCAG 60.004 57.895 1.29 0.00 0.00 4.24
5835 5942 1.003839 CTGGGACGCCACTTAAGCA 60.004 57.895 1.29 0.00 0.00 3.91
5836 5943 1.003718 ACTGGGACGCCACTTAAGC 60.004 57.895 1.29 0.00 0.00 3.09
5839 5946 1.369692 CACACTGGGACGCCACTTA 59.630 57.895 0.00 0.00 0.00 2.24
5931 6041 2.158726 AGGCTACGGTTTCCAGTTCAAA 60.159 45.455 0.00 0.00 0.00 2.69
5933 6043 1.053424 AGGCTACGGTTTCCAGTTCA 58.947 50.000 0.00 0.00 0.00 3.18
6000 6111 3.644966 AAGCAAGAAACCCGATATGGA 57.355 42.857 0.00 0.00 42.00 3.41
6080 6200 1.880796 CATCATACGACCGCGGCAA 60.881 57.895 28.58 8.63 43.17 4.52
6087 6207 2.623889 AGGAGCAGTACATCATACGACC 59.376 50.000 0.00 0.00 0.00 4.79
6090 6210 2.797156 GCAAGGAGCAGTACATCATACG 59.203 50.000 0.00 0.00 44.79 3.06
6147 6267 0.816018 TCGCCAGCTTGGTTTTTCGA 60.816 50.000 4.45 0.00 40.46 3.71
6150 6270 1.412343 ACATTCGCCAGCTTGGTTTTT 59.588 42.857 4.45 0.00 40.46 1.94
6201 6324 4.022762 ACGTGACAGCCTAGCTATATGAAG 60.023 45.833 0.00 0.00 36.40 3.02
6240 6363 1.804396 TTTGTGATGCCAACCGCCAG 61.804 55.000 0.00 0.00 36.24 4.85
6326 6453 8.319881 GGAGTAGTATTTAGGAACAAAAGGAGT 58.680 37.037 0.00 0.00 0.00 3.85
6327 6454 7.769507 GGGAGTAGTATTTAGGAACAAAAGGAG 59.230 40.741 0.00 0.00 0.00 3.69
6328 6455 7.460082 AGGGAGTAGTATTTAGGAACAAAAGGA 59.540 37.037 0.00 0.00 0.00 3.36
6329 6456 7.631007 AGGGAGTAGTATTTAGGAACAAAAGG 58.369 38.462 0.00 0.00 0.00 3.11
6330 6457 7.769507 GGAGGGAGTAGTATTTAGGAACAAAAG 59.230 40.741 0.00 0.00 0.00 2.27
6331 6458 7.238096 TGGAGGGAGTAGTATTTAGGAACAAAA 59.762 37.037 0.00 0.00 0.00 2.44
6332 6459 6.731919 TGGAGGGAGTAGTATTTAGGAACAAA 59.268 38.462 0.00 0.00 0.00 2.83
6333 6460 6.266080 TGGAGGGAGTAGTATTTAGGAACAA 58.734 40.000 0.00 0.00 0.00 2.83
6334 6461 5.845734 TGGAGGGAGTAGTATTTAGGAACA 58.154 41.667 0.00 0.00 0.00 3.18
6335 6462 6.997942 ATGGAGGGAGTAGTATTTAGGAAC 57.002 41.667 0.00 0.00 0.00 3.62
6336 6463 8.401955 AAAATGGAGGGAGTAGTATTTAGGAA 57.598 34.615 0.00 0.00 0.00 3.36
6337 6464 9.510062 TTAAAATGGAGGGAGTAGTATTTAGGA 57.490 33.333 0.00 0.00 0.00 2.94
6345 6472 7.985752 CGAGTAATTTAAAATGGAGGGAGTAGT 59.014 37.037 0.00 0.00 0.00 2.73
6346 6473 7.985752 ACGAGTAATTTAAAATGGAGGGAGTAG 59.014 37.037 0.00 0.00 0.00 2.57
6347 6474 7.854337 ACGAGTAATTTAAAATGGAGGGAGTA 58.146 34.615 0.00 0.00 0.00 2.59
6348 6475 6.718294 ACGAGTAATTTAAAATGGAGGGAGT 58.282 36.000 0.00 0.00 0.00 3.85
6349 6476 6.821665 TGACGAGTAATTTAAAATGGAGGGAG 59.178 38.462 0.00 0.00 0.00 4.30
6350 6477 6.596497 GTGACGAGTAATTTAAAATGGAGGGA 59.404 38.462 0.00 0.00 0.00 4.20
6351 6478 6.373216 TGTGACGAGTAATTTAAAATGGAGGG 59.627 38.462 0.00 0.00 0.00 4.30
6352 6479 7.372451 TGTGACGAGTAATTTAAAATGGAGG 57.628 36.000 0.00 0.00 0.00 4.30
6361 6488 9.607988 ACATCCATTTATGTGACGAGTAATTTA 57.392 29.630 0.00 0.00 38.65 1.40
6362 6489 8.506168 ACATCCATTTATGTGACGAGTAATTT 57.494 30.769 0.00 0.00 38.65 1.82
6363 6490 9.778741 ATACATCCATTTATGTGACGAGTAATT 57.221 29.630 0.00 0.00 40.29 1.40
6364 6491 9.424319 GATACATCCATTTATGTGACGAGTAAT 57.576 33.333 0.00 0.00 40.29 1.89
6365 6492 8.638873 AGATACATCCATTTATGTGACGAGTAA 58.361 33.333 0.00 0.00 40.29 2.24
6366 6493 8.178313 AGATACATCCATTTATGTGACGAGTA 57.822 34.615 0.00 0.00 40.29 2.59
6367 6494 7.055667 AGATACATCCATTTATGTGACGAGT 57.944 36.000 0.00 0.00 40.29 4.18
6368 6495 8.515414 TCTAGATACATCCATTTATGTGACGAG 58.485 37.037 0.00 0.00 40.29 4.18
6369 6496 8.404107 TCTAGATACATCCATTTATGTGACGA 57.596 34.615 0.00 0.00 40.29 4.20
6370 6497 9.645059 ATTCTAGATACATCCATTTATGTGACG 57.355 33.333 0.00 0.00 40.29 4.35
6399 6526 8.696374 CGGATATGGATGTATCTAGGTGTATTT 58.304 37.037 0.00 0.00 32.78 1.40
6400 6527 7.201920 GCGGATATGGATGTATCTAGGTGTATT 60.202 40.741 0.00 0.00 32.78 1.89
6401 6528 6.265649 GCGGATATGGATGTATCTAGGTGTAT 59.734 42.308 0.00 0.00 32.78 2.29
6402 6529 5.593095 GCGGATATGGATGTATCTAGGTGTA 59.407 44.000 0.00 0.00 32.78 2.90
6403 6530 4.402793 GCGGATATGGATGTATCTAGGTGT 59.597 45.833 0.00 0.00 32.78 4.16
6404 6531 4.498177 CGCGGATATGGATGTATCTAGGTG 60.498 50.000 0.00 0.00 32.78 4.00
6405 6532 3.632604 CGCGGATATGGATGTATCTAGGT 59.367 47.826 0.00 0.00 32.78 3.08
6406 6533 3.883489 TCGCGGATATGGATGTATCTAGG 59.117 47.826 6.13 0.00 32.78 3.02
6407 6534 4.335594 TGTCGCGGATATGGATGTATCTAG 59.664 45.833 6.13 0.00 32.78 2.43
6408 6535 4.266714 TGTCGCGGATATGGATGTATCTA 58.733 43.478 6.13 0.00 32.78 1.98
6409 6536 3.089284 TGTCGCGGATATGGATGTATCT 58.911 45.455 6.13 0.00 32.78 1.98
6410 6537 3.503827 TGTCGCGGATATGGATGTATC 57.496 47.619 6.13 0.00 0.00 2.24
6411 6538 3.953712 TTGTCGCGGATATGGATGTAT 57.046 42.857 6.13 0.00 0.00 2.29
6412 6539 3.737032 TTTGTCGCGGATATGGATGTA 57.263 42.857 6.13 0.00 0.00 2.29
6413 6540 2.613026 TTTGTCGCGGATATGGATGT 57.387 45.000 6.13 0.00 0.00 3.06
6414 6541 5.801350 ATTATTTGTCGCGGATATGGATG 57.199 39.130 6.13 0.00 0.00 3.51
6415 6542 5.063438 CGAATTATTTGTCGCGGATATGGAT 59.937 40.000 6.13 0.00 0.00 3.41
6416 6543 4.387559 CGAATTATTTGTCGCGGATATGGA 59.612 41.667 6.13 0.00 0.00 3.41
6417 6544 4.435518 CCGAATTATTTGTCGCGGATATGG 60.436 45.833 6.13 0.00 41.11 2.74
6418 6545 4.387559 TCCGAATTATTTGTCGCGGATATG 59.612 41.667 6.13 0.00 42.29 1.78
6419 6546 4.562082 TCCGAATTATTTGTCGCGGATAT 58.438 39.130 6.13 0.00 42.29 1.63
6420 6547 3.979948 TCCGAATTATTTGTCGCGGATA 58.020 40.909 6.13 0.00 42.29 2.59
6421 6548 2.828877 TCCGAATTATTTGTCGCGGAT 58.171 42.857 6.13 0.00 42.29 4.18
6422 6549 2.296831 TCCGAATTATTTGTCGCGGA 57.703 45.000 6.13 0.00 44.60 5.54
6423 6550 2.700694 GTTCCGAATTATTTGTCGCGG 58.299 47.619 6.13 0.00 40.06 6.46
6424 6551 2.350616 CGTTCCGAATTATTTGTCGCG 58.649 47.619 0.00 0.00 35.93 5.87
6425 6552 2.349275 TCCGTTCCGAATTATTTGTCGC 59.651 45.455 0.00 0.00 35.93 5.19
6426 6553 3.000925 CCTCCGTTCCGAATTATTTGTCG 59.999 47.826 0.00 0.00 37.01 4.35
6427 6554 3.311596 CCCTCCGTTCCGAATTATTTGTC 59.688 47.826 0.00 0.00 0.00 3.18
6428 6555 3.054948 TCCCTCCGTTCCGAATTATTTGT 60.055 43.478 0.00 0.00 0.00 2.83
6429 6556 3.537580 TCCCTCCGTTCCGAATTATTTG 58.462 45.455 0.00 0.00 0.00 2.32
6430 6557 3.199289 ACTCCCTCCGTTCCGAATTATTT 59.801 43.478 0.00 0.00 0.00 1.40
6431 6558 2.770232 ACTCCCTCCGTTCCGAATTATT 59.230 45.455 0.00 0.00 0.00 1.40
6432 6559 2.395619 ACTCCCTCCGTTCCGAATTAT 58.604 47.619 0.00 0.00 0.00 1.28
6433 6560 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
6434 6561 1.755380 CTACTCCCTCCGTTCCGAATT 59.245 52.381 0.00 0.00 0.00 2.17
6435 6562 1.341778 ACTACTCCCTCCGTTCCGAAT 60.342 52.381 0.00 0.00 0.00 3.34
6436 6563 0.038744 ACTACTCCCTCCGTTCCGAA 59.961 55.000 0.00 0.00 0.00 4.30
6437 6564 0.911769 TACTACTCCCTCCGTTCCGA 59.088 55.000 0.00 0.00 0.00 4.55
6438 6565 1.978454 ATACTACTCCCTCCGTTCCG 58.022 55.000 0.00 0.00 0.00 4.30
6439 6566 4.468713 ACTTATACTACTCCCTCCGTTCC 58.531 47.826 0.00 0.00 0.00 3.62
6440 6567 5.375773 AGACTTATACTACTCCCTCCGTTC 58.624 45.833 0.00 0.00 0.00 3.95
6441 6568 5.385628 AGACTTATACTACTCCCTCCGTT 57.614 43.478 0.00 0.00 0.00 4.44
6442 6569 5.385628 AAGACTTATACTACTCCCTCCGT 57.614 43.478 0.00 0.00 0.00 4.69
6443 6570 5.826737 TCAAAGACTTATACTACTCCCTCCG 59.173 44.000 0.00 0.00 0.00 4.63
6444 6571 7.657023 TTCAAAGACTTATACTACTCCCTCC 57.343 40.000 0.00 0.00 0.00 4.30
6470 6597 8.361139 CGAAGGAAGTAGTTCATAGTGGAATAT 58.639 37.037 12.31 0.00 33.93 1.28
6471 6598 7.341256 ACGAAGGAAGTAGTTCATAGTGGAATA 59.659 37.037 12.31 0.00 33.93 1.75
6472 6599 6.154706 ACGAAGGAAGTAGTTCATAGTGGAAT 59.845 38.462 12.31 0.00 33.93 3.01
6473 6600 5.479375 ACGAAGGAAGTAGTTCATAGTGGAA 59.521 40.000 12.31 0.00 33.93 3.53
6474 6601 5.014858 ACGAAGGAAGTAGTTCATAGTGGA 58.985 41.667 12.31 0.00 33.93 4.02
6475 6602 5.326200 ACGAAGGAAGTAGTTCATAGTGG 57.674 43.478 12.31 0.00 33.93 4.00
6476 6603 5.805994 GGAACGAAGGAAGTAGTTCATAGTG 59.194 44.000 12.31 1.82 43.24 2.74
6477 6604 5.715753 AGGAACGAAGGAAGTAGTTCATAGT 59.284 40.000 12.31 6.44 43.24 2.12
6478 6605 6.210287 AGGAACGAAGGAAGTAGTTCATAG 57.790 41.667 12.31 5.86 43.24 2.23
6479 6606 7.707624 TTAGGAACGAAGGAAGTAGTTCATA 57.292 36.000 12.31 3.95 43.24 2.15
6480 6607 6.600882 TTAGGAACGAAGGAAGTAGTTCAT 57.399 37.500 12.31 1.82 43.24 2.57
6481 6608 6.409524 TTTAGGAACGAAGGAAGTAGTTCA 57.590 37.500 12.31 0.00 43.24 3.18
6482 6609 9.597170 AATATTTAGGAACGAAGGAAGTAGTTC 57.403 33.333 1.31 1.31 41.40 3.01
6483 6610 9.955102 AAATATTTAGGAACGAAGGAAGTAGTT 57.045 29.630 0.00 0.00 0.00 2.24
6484 6611 9.379791 CAAATATTTAGGAACGAAGGAAGTAGT 57.620 33.333 0.00 0.00 0.00 2.73
6485 6612 9.379791 ACAAATATTTAGGAACGAAGGAAGTAG 57.620 33.333 0.00 0.00 0.00 2.57
6486 6613 9.374838 GACAAATATTTAGGAACGAAGGAAGTA 57.625 33.333 0.00 0.00 0.00 2.24
6487 6614 8.101419 AGACAAATATTTAGGAACGAAGGAAGT 58.899 33.333 0.00 0.00 0.00 3.01
6488 6615 8.494016 AGACAAATATTTAGGAACGAAGGAAG 57.506 34.615 0.00 0.00 0.00 3.46
6489 6616 8.857694 AAGACAAATATTTAGGAACGAAGGAA 57.142 30.769 0.00 0.00 0.00 3.36
6490 6617 8.857694 AAAGACAAATATTTAGGAACGAAGGA 57.142 30.769 0.00 0.00 0.00 3.36
6491 6618 8.947115 AGAAAGACAAATATTTAGGAACGAAGG 58.053 33.333 0.00 0.00 0.00 3.46
6568 6695 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
6569 6696 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
6570 6697 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
6571 6698 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
6572 6699 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
6573 6700 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
6574 6701 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
6575 6702 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
6576 6703 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
6577 6704 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
6578 6705 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
6579 6706 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
6580 6707 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
6581 6708 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
6582 6709 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
6583 6710 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
6584 6711 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
6585 6712 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
6586 6713 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
6587 6714 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
6588 6715 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
6589 6716 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
6590 6717 6.147164 ACATTTCAACAAGTGACTACATACGG 59.853 38.462 0.00 0.00 35.39 4.02
6591 6718 7.116376 AGACATTTCAACAAGTGACTACATACG 59.884 37.037 0.00 0.00 35.39 3.06
6592 6719 8.311650 AGACATTTCAACAAGTGACTACATAC 57.688 34.615 0.00 0.00 35.39 2.39
6593 6720 9.639601 CTAGACATTTCAACAAGTGACTACATA 57.360 33.333 0.00 0.00 35.39 2.29
6594 6721 8.367911 TCTAGACATTTCAACAAGTGACTACAT 58.632 33.333 0.00 0.00 35.39 2.29
6595 6722 7.722363 TCTAGACATTTCAACAAGTGACTACA 58.278 34.615 0.00 0.00 35.39 2.74
6596 6723 8.589335 TTCTAGACATTTCAACAAGTGACTAC 57.411 34.615 0.00 0.00 35.39 2.73
6597 6724 9.261180 CTTTCTAGACATTTCAACAAGTGACTA 57.739 33.333 0.00 0.00 35.39 2.59
6598 6725 7.987458 TCTTTCTAGACATTTCAACAAGTGACT 59.013 33.333 0.00 0.00 35.39 3.41
6599 6726 8.142994 TCTTTCTAGACATTTCAACAAGTGAC 57.857 34.615 0.00 0.00 35.39 3.67
6615 6742 7.147949 CCGTCCCTAAATACTTGTCTTTCTAGA 60.148 40.741 0.00 0.00 0.00 2.43
6616 6743 6.979238 CCGTCCCTAAATACTTGTCTTTCTAG 59.021 42.308 0.00 0.00 0.00 2.43
6617 6744 6.664816 TCCGTCCCTAAATACTTGTCTTTCTA 59.335 38.462 0.00 0.00 0.00 2.10
6618 6745 5.482878 TCCGTCCCTAAATACTTGTCTTTCT 59.517 40.000 0.00 0.00 0.00 2.52
6619 6746 5.727434 TCCGTCCCTAAATACTTGTCTTTC 58.273 41.667 0.00 0.00 0.00 2.62
6620 6747 5.338137 CCTCCGTCCCTAAATACTTGTCTTT 60.338 44.000 0.00 0.00 0.00 2.52
6621 6748 4.161754 CCTCCGTCCCTAAATACTTGTCTT 59.838 45.833 0.00 0.00 0.00 3.01
6622 6749 3.705072 CCTCCGTCCCTAAATACTTGTCT 59.295 47.826 0.00 0.00 0.00 3.41
6623 6750 3.181468 CCCTCCGTCCCTAAATACTTGTC 60.181 52.174 0.00 0.00 0.00 3.18
6624 6751 2.770232 CCCTCCGTCCCTAAATACTTGT 59.230 50.000 0.00 0.00 0.00 3.16
6625 6752 3.036091 TCCCTCCGTCCCTAAATACTTG 58.964 50.000 0.00 0.00 0.00 3.16
6626 6753 3.306613 CTCCCTCCGTCCCTAAATACTT 58.693 50.000 0.00 0.00 0.00 2.24
6627 6754 2.960163 CTCCCTCCGTCCCTAAATACT 58.040 52.381 0.00 0.00 0.00 2.12
6628 6755 1.343789 GCTCCCTCCGTCCCTAAATAC 59.656 57.143 0.00 0.00 0.00 1.89
6629 6756 1.062734 TGCTCCCTCCGTCCCTAAATA 60.063 52.381 0.00 0.00 0.00 1.40
6630 6757 0.326238 TGCTCCCTCCGTCCCTAAAT 60.326 55.000 0.00 0.00 0.00 1.40
6631 6758 1.079621 TGCTCCCTCCGTCCCTAAA 59.920 57.895 0.00 0.00 0.00 1.85
6632 6759 1.684734 GTGCTCCCTCCGTCCCTAA 60.685 63.158 0.00 0.00 0.00 2.69
6633 6760 2.043248 GTGCTCCCTCCGTCCCTA 60.043 66.667 0.00 0.00 0.00 3.53
6634 6761 2.238319 TATGTGCTCCCTCCGTCCCT 62.238 60.000 0.00 0.00 0.00 4.20
6635 6762 1.122019 ATATGTGCTCCCTCCGTCCC 61.122 60.000 0.00 0.00 0.00 4.46
6636 6763 0.034059 CATATGTGCTCCCTCCGTCC 59.966 60.000 0.00 0.00 0.00 4.79
6637 6764 1.040646 TCATATGTGCTCCCTCCGTC 58.959 55.000 1.90 0.00 0.00 4.79
6638 6765 1.414181 CTTCATATGTGCTCCCTCCGT 59.586 52.381 1.90 0.00 0.00 4.69
6639 6766 1.875576 GCTTCATATGTGCTCCCTCCG 60.876 57.143 13.42 0.00 0.00 4.63
6640 6767 1.141657 TGCTTCATATGTGCTCCCTCC 59.858 52.381 18.66 0.00 0.00 4.30
6641 6768 2.627515 TGCTTCATATGTGCTCCCTC 57.372 50.000 18.66 0.00 0.00 4.30
6642 6769 3.370840 TTTGCTTCATATGTGCTCCCT 57.629 42.857 18.66 0.00 0.00 4.20
6643 6770 4.098349 TCATTTTGCTTCATATGTGCTCCC 59.902 41.667 18.66 0.52 0.00 4.30
6644 6771 5.252969 TCATTTTGCTTCATATGTGCTCC 57.747 39.130 18.66 1.62 0.00 4.70
6645 6772 4.738740 GCTCATTTTGCTTCATATGTGCTC 59.261 41.667 18.66 3.62 35.66 4.26
6646 6773 4.679662 GCTCATTTTGCTTCATATGTGCT 58.320 39.130 18.66 2.63 35.66 4.40
6647 6774 3.484649 CGCTCATTTTGCTTCATATGTGC 59.515 43.478 13.68 13.68 35.37 4.57
6648 6775 4.912214 TCGCTCATTTTGCTTCATATGTG 58.088 39.130 1.90 0.00 0.00 3.21
6649 6776 5.565592 TTCGCTCATTTTGCTTCATATGT 57.434 34.783 1.90 0.00 0.00 2.29
6650 6777 6.436261 AGATTCGCTCATTTTGCTTCATATG 58.564 36.000 0.00 0.00 0.00 1.78
6651 6778 6.630444 AGATTCGCTCATTTTGCTTCATAT 57.370 33.333 0.00 0.00 0.00 1.78
6652 6779 6.538381 TGTAGATTCGCTCATTTTGCTTCATA 59.462 34.615 0.00 0.00 0.00 2.15
6653 6780 4.978083 AGATTCGCTCATTTTGCTTCAT 57.022 36.364 0.00 0.00 0.00 2.57
6654 6781 4.694982 TGTAGATTCGCTCATTTTGCTTCA 59.305 37.500 0.00 0.00 0.00 3.02
6655 6782 5.024555 GTGTAGATTCGCTCATTTTGCTTC 58.975 41.667 0.00 0.00 0.00 3.86
6656 6783 4.697352 AGTGTAGATTCGCTCATTTTGCTT 59.303 37.500 0.00 0.00 0.00 3.91
6657 6784 4.256920 AGTGTAGATTCGCTCATTTTGCT 58.743 39.130 0.00 0.00 0.00 3.91
6658 6785 4.331168 AGAGTGTAGATTCGCTCATTTTGC 59.669 41.667 9.37 0.00 44.43 3.68
6659 6786 7.525688 TTAGAGTGTAGATTCGCTCATTTTG 57.474 36.000 9.37 0.00 44.43 2.44
6660 6787 8.547967 TTTTAGAGTGTAGATTCGCTCATTTT 57.452 30.769 9.37 0.00 44.43 1.82
6661 6788 8.607459 CATTTTAGAGTGTAGATTCGCTCATTT 58.393 33.333 9.37 0.00 44.43 2.32
6662 6789 7.254590 GCATTTTAGAGTGTAGATTCGCTCATT 60.255 37.037 9.37 0.00 44.43 2.57
6663 6790 6.201806 GCATTTTAGAGTGTAGATTCGCTCAT 59.798 38.462 9.37 0.00 44.43 2.90
6664 6791 5.520288 GCATTTTAGAGTGTAGATTCGCTCA 59.480 40.000 9.37 0.00 44.43 4.26
6665 6792 5.520288 TGCATTTTAGAGTGTAGATTCGCTC 59.480 40.000 0.00 0.00 42.95 5.03
6666 6793 5.419542 TGCATTTTAGAGTGTAGATTCGCT 58.580 37.500 0.00 0.00 0.00 4.93
6667 6794 5.718649 TGCATTTTAGAGTGTAGATTCGC 57.281 39.130 0.00 0.00 0.00 4.70
6668 6795 7.706281 AGATGCATTTTAGAGTGTAGATTCG 57.294 36.000 0.00 0.00 0.00 3.34
6669 6796 9.534565 TGTAGATGCATTTTAGAGTGTAGATTC 57.465 33.333 0.00 0.00 0.00 2.52
6719 6846 9.907576 CGCTCTGTTTCTAAATATAAGTCTTTG 57.092 33.333 0.00 0.00 0.00 2.77
6720 6847 9.871238 TCGCTCTGTTTCTAAATATAAGTCTTT 57.129 29.630 0.00 0.00 0.00 2.52
6721 6848 9.522804 CTCGCTCTGTTTCTAAATATAAGTCTT 57.477 33.333 0.00 0.00 0.00 3.01
6722 6849 8.688151 ACTCGCTCTGTTTCTAAATATAAGTCT 58.312 33.333 0.00 0.00 0.00 3.24
6723 6850 8.859517 ACTCGCTCTGTTTCTAAATATAAGTC 57.140 34.615 0.00 0.00 0.00 3.01
6724 6851 9.953697 CTACTCGCTCTGTTTCTAAATATAAGT 57.046 33.333 0.00 0.00 0.00 2.24
6725 6852 9.953697 ACTACTCGCTCTGTTTCTAAATATAAG 57.046 33.333 0.00 0.00 0.00 1.73
6727 6854 9.731819 CAACTACTCGCTCTGTTTCTAAATATA 57.268 33.333 0.00 0.00 0.00 0.86
6728 6855 8.251721 ACAACTACTCGCTCTGTTTCTAAATAT 58.748 33.333 0.00 0.00 0.00 1.28
6729 6856 7.600065 ACAACTACTCGCTCTGTTTCTAAATA 58.400 34.615 0.00 0.00 0.00 1.40
6730 6857 6.456501 ACAACTACTCGCTCTGTTTCTAAAT 58.543 36.000 0.00 0.00 0.00 1.40
6731 6858 5.839621 ACAACTACTCGCTCTGTTTCTAAA 58.160 37.500 0.00 0.00 0.00 1.85
6732 6859 5.449107 ACAACTACTCGCTCTGTTTCTAA 57.551 39.130 0.00 0.00 0.00 2.10
6733 6860 5.449107 AACAACTACTCGCTCTGTTTCTA 57.551 39.130 0.00 0.00 0.00 2.10
6734 6861 4.323553 AACAACTACTCGCTCTGTTTCT 57.676 40.909 0.00 0.00 0.00 2.52
6735 6862 4.762809 CAAACAACTACTCGCTCTGTTTC 58.237 43.478 0.00 0.00 37.95 2.78
6736 6863 3.002348 GCAAACAACTACTCGCTCTGTTT 59.998 43.478 0.00 0.00 40.01 2.83
6737 6864 2.544267 GCAAACAACTACTCGCTCTGTT 59.456 45.455 0.00 0.00 0.00 3.16
6738 6865 2.135933 GCAAACAACTACTCGCTCTGT 58.864 47.619 0.00 0.00 0.00 3.41
6739 6866 2.135139 TGCAAACAACTACTCGCTCTG 58.865 47.619 0.00 0.00 0.00 3.35
6740 6867 2.526304 TGCAAACAACTACTCGCTCT 57.474 45.000 0.00 0.00 0.00 4.09
6741 6868 2.222596 CGATGCAAACAACTACTCGCTC 60.223 50.000 0.00 0.00 0.00 5.03
6742 6869 1.726791 CGATGCAAACAACTACTCGCT 59.273 47.619 0.00 0.00 0.00 4.93
6743 6870 1.724623 TCGATGCAAACAACTACTCGC 59.275 47.619 0.00 0.00 0.00 5.03
6744 6871 4.026804 GGTATCGATGCAAACAACTACTCG 60.027 45.833 15.61 0.00 0.00 4.18
6827 6954 2.138320 GATGATGATGGCCGTGTACTG 58.862 52.381 0.00 0.00 0.00 2.74
6834 6961 2.418976 GTGATGATGATGATGATGGCCG 59.581 50.000 0.00 0.00 0.00 6.13
6836 6963 3.418047 TGGTGATGATGATGATGATGGC 58.582 45.455 0.00 0.00 0.00 4.40
6837 6964 5.253330 TGATGGTGATGATGATGATGATGG 58.747 41.667 0.00 0.00 0.00 3.51
6838 6965 6.678900 GCATGATGGTGATGATGATGATGATG 60.679 42.308 0.00 0.00 0.00 3.07
6841 6968 4.142381 GGCATGATGGTGATGATGATGATG 60.142 45.833 0.00 0.00 0.00 3.07
6843 6970 3.181438 TGGCATGATGGTGATGATGATGA 60.181 43.478 0.00 0.00 0.00 2.92
6844 6971 3.153919 TGGCATGATGGTGATGATGATG 58.846 45.455 0.00 0.00 0.00 3.07
6868 6995 0.800683 CGCTGTCGATTCGGTAAGCA 60.801 55.000 20.44 7.98 38.10 3.91
6907 7034 1.787056 GTACGACAAGCGCGTTTGC 60.787 57.895 31.62 22.96 46.04 3.68
6922 7049 3.479489 GAGCTAGAGGGTGGAGTAGTAC 58.521 54.545 0.00 0.00 0.00 2.73
6929 7056 1.379977 CACCGAGCTAGAGGGTGGA 60.380 63.158 15.65 0.00 45.84 4.02
6940 7074 2.391389 GCACTGGCTAACACCGAGC 61.391 63.158 0.00 0.00 39.33 5.03
6974 7108 2.159626 CGTAATGTTGGTGTTAAGCCGG 60.160 50.000 0.00 0.00 0.00 6.13
7034 7171 2.790448 CGTTTGCGTCTGTACTGTGTTA 59.210 45.455 0.00 0.00 0.00 2.41
7035 7172 1.591158 CGTTTGCGTCTGTACTGTGTT 59.409 47.619 0.00 0.00 0.00 3.32
7036 7173 1.205657 CGTTTGCGTCTGTACTGTGT 58.794 50.000 0.00 0.00 0.00 3.72
7037 7174 0.111266 GCGTTTGCGTCTGTACTGTG 60.111 55.000 0.00 0.00 40.81 3.66
7038 7175 2.222592 GCGTTTGCGTCTGTACTGT 58.777 52.632 0.00 0.00 40.81 3.55
7049 7186 3.998522 ACGTGTTTATATGAGCGTTTGC 58.001 40.909 0.00 0.00 43.24 3.68
7050 7187 7.786118 GTGTATACGTGTTTATATGAGCGTTTG 59.214 37.037 0.00 0.00 34.38 2.93
7051 7188 7.703621 AGTGTATACGTGTTTATATGAGCGTTT 59.296 33.333 0.00 0.00 34.38 3.60
7052 7189 7.198390 AGTGTATACGTGTTTATATGAGCGTT 58.802 34.615 0.00 0.00 34.38 4.84
7053 7190 6.732154 AGTGTATACGTGTTTATATGAGCGT 58.268 36.000 0.00 0.00 36.52 5.07
7054 7191 7.249609 GAGTGTATACGTGTTTATATGAGCG 57.750 40.000 0.00 0.00 0.00 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.