Multiple sequence alignment - TraesCS1A01G207500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G207500 chr1A 100.000 3644 0 0 1 3644 369497384 369493741 0.000000e+00 6730.0
1 TraesCS1A01G207500 chr1A 99.329 149 1 0 3099 3247 369494233 369494085 1.670000e-68 270.0
2 TraesCS1A01G207500 chr1A 99.329 149 1 0 3152 3300 369494286 369494138 1.670000e-68 270.0
3 TraesCS1A01G207500 chr1A 98.958 96 1 0 3099 3194 369494180 369494085 4.840000e-39 172.0
4 TraesCS1A01G207500 chr1A 98.958 96 1 0 3205 3300 369494286 369494191 4.840000e-39 172.0
5 TraesCS1A01G207500 chr1A 80.159 126 20 5 3447 3571 369493897 369493776 5.010000e-14 89.8
6 TraesCS1A01G207500 chr1A 80.159 126 20 5 3488 3609 369493938 369493814 5.010000e-14 89.8
7 TraesCS1A01G207500 chr1A 97.674 43 1 0 3099 3141 369494127 369494085 1.400000e-09 75.0
8 TraesCS1A01G207500 chr1A 97.674 43 1 0 3258 3300 369494286 369494244 1.400000e-09 75.0
9 TraesCS1A01G207500 chr1B 93.723 1609 85 9 1135 2735 398143683 398142083 0.000000e+00 2398.0
10 TraesCS1A01G207500 chr1B 90.639 1143 52 23 1 1124 398144842 398143736 0.000000e+00 1467.0
11 TraesCS1A01G207500 chr1B 90.909 330 29 1 1 330 683420803 683420475 3.340000e-120 442.0
12 TraesCS1A01G207500 chr1D 94.356 1134 46 9 1 1124 296979345 296978220 0.000000e+00 1724.0
13 TraesCS1A01G207500 chr1D 95.205 709 32 1 1677 2383 296977567 296976859 0.000000e+00 1120.0
14 TraesCS1A01G207500 chr1D 90.483 746 34 14 2380 3124 296974721 296974012 0.000000e+00 950.0
15 TraesCS1A01G207500 chr1D 84.517 704 87 13 2250 2935 296735366 296734667 0.000000e+00 676.0
16 TraesCS1A01G207500 chr1D 90.760 487 35 6 1135 1619 296978158 296977680 3.070000e-180 641.0
17 TraesCS1A01G207500 chr1D 90.000 330 33 0 1 330 46479674 46480003 9.350000e-116 427.0
18 TraesCS1A01G207500 chr6D 93.146 321 21 1 2718 3037 275569502 275569822 1.530000e-128 470.0
19 TraesCS1A01G207500 chr2D 90.303 330 32 0 1 330 36503396 36503725 2.010000e-117 433.0
20 TraesCS1A01G207500 chr7D 90.030 331 32 1 1 330 168798074 168798404 9.350000e-116 427.0
21 TraesCS1A01G207500 chr7D 89.697 330 34 0 1 330 277456322 277456651 4.350000e-114 422.0
22 TraesCS1A01G207500 chr3D 89.939 328 32 1 3 330 12135086 12134760 4.350000e-114 422.0
23 TraesCS1A01G207500 chr4D 89.426 331 34 1 1 330 462819736 462819406 2.020000e-112 416.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G207500 chr1A 369493741 369497384 3643 True 882.622222 6730 94.693333 1 3644 9 chr1A.!!$R1 3643
1 TraesCS1A01G207500 chr1B 398142083 398144842 2759 True 1932.500000 2398 92.181000 1 2735 2 chr1B.!!$R2 2734
2 TraesCS1A01G207500 chr1D 296974012 296979345 5333 True 1108.750000 1724 92.701000 1 3124 4 chr1D.!!$R2 3123
3 TraesCS1A01G207500 chr1D 296734667 296735366 699 True 676.000000 676 84.517000 2250 2935 1 chr1D.!!$R1 685

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
973 1009 0.248621 GAACTTGTTGCGCTGTTGCT 60.249 50.0 9.73 0.0 36.97 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2941 5250 0.732571 GATCAATCAAGGCGGCGAAA 59.267 50.0 12.98 0.0 0.0 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
217 218 2.288025 GGTGTTCACCGAGGGGCTA 61.288 63.158 6.22 0.00 36.48 3.93
559 560 3.522750 AGGATTCCTAGATGATCCCATGC 59.477 47.826 2.49 0.00 28.75 4.06
562 563 0.979665 CCTAGATGATCCCATGCCGT 59.020 55.000 0.00 0.00 32.09 5.68
563 564 1.066573 CCTAGATGATCCCATGCCGTC 60.067 57.143 0.00 0.00 32.09 4.79
565 566 2.281070 ATGATCCCATGCCGTCGC 60.281 61.111 0.00 0.00 0.00 5.19
629 638 4.391405 AGTTTGTTGCTTTTCTCCCTTG 57.609 40.909 0.00 0.00 0.00 3.61
633 642 1.178534 TTGCTTTTCTCCCTTGCCCG 61.179 55.000 0.00 0.00 0.00 6.13
662 671 4.454728 TGGCCATGTAAAATTTCTCAGC 57.545 40.909 0.00 0.00 0.00 4.26
690 704 1.804151 GTCAGCGAATGCAACTGGTAA 59.196 47.619 0.00 0.00 46.23 2.85
691 705 2.225491 GTCAGCGAATGCAACTGGTAAA 59.775 45.455 0.00 0.00 46.23 2.01
717 731 0.385473 GCACATTTACTTGCGTGCGT 60.385 50.000 0.00 0.00 44.54 5.24
754 769 4.136796 TGGGACTCTGAGTTTGAATGTTG 58.863 43.478 12.27 0.00 0.00 3.33
779 794 4.912187 GCTGAAAGTTTCCAAATTCGAGTC 59.088 41.667 13.01 0.00 35.30 3.36
858 873 3.243907 GGGGGAATCTCTGTCAATAGTCG 60.244 52.174 0.00 0.00 0.00 4.18
928 951 3.943958 TGTCGATATTACAACGTCGGAG 58.056 45.455 0.00 0.00 35.01 4.63
944 967 2.138320 CGGAGTCGGAATCCAATCATG 58.862 52.381 22.76 3.16 36.57 3.07
968 1004 1.082756 GTCCGAACTTGTTGCGCTG 60.083 57.895 9.73 0.00 0.00 5.18
969 1005 1.522806 TCCGAACTTGTTGCGCTGT 60.523 52.632 9.73 0.00 0.00 4.40
970 1006 1.092921 TCCGAACTTGTTGCGCTGTT 61.093 50.000 9.73 6.00 0.00 3.16
971 1007 0.929824 CCGAACTTGTTGCGCTGTTG 60.930 55.000 9.73 0.00 0.00 3.33
972 1008 1.531522 CGAACTTGTTGCGCTGTTGC 61.532 55.000 9.73 0.00 0.00 4.17
973 1009 0.248621 GAACTTGTTGCGCTGTTGCT 60.249 50.000 9.73 0.00 36.97 3.91
974 1010 0.526096 AACTTGTTGCGCTGTTGCTG 60.526 50.000 9.73 0.00 36.97 4.41
975 1011 2.278726 TTGTTGCGCTGTTGCTGC 60.279 55.556 9.73 0.00 38.50 5.25
976 1012 2.672908 CTTGTTGCGCTGTTGCTGCT 62.673 55.000 9.73 0.00 38.69 4.24
977 1013 2.728383 GTTGCGCTGTTGCTGCTG 60.728 61.111 9.73 0.00 38.69 4.41
978 1014 4.634133 TTGCGCTGTTGCTGCTGC 62.634 61.111 9.73 8.89 38.69 5.25
981 1017 4.400109 CGCTGTTGCTGCTGCCTG 62.400 66.667 13.47 3.99 38.71 4.85
982 1018 4.719369 GCTGTTGCTGCTGCCTGC 62.719 66.667 13.47 10.04 43.25 4.85
983 1019 2.984155 CTGTTGCTGCTGCCTGCT 60.984 61.111 13.47 0.00 43.37 4.24
984 1020 3.268965 CTGTTGCTGCTGCCTGCTG 62.269 63.158 13.47 3.82 43.37 4.41
985 1021 2.981909 GTTGCTGCTGCCTGCTGA 60.982 61.111 13.47 0.00 42.27 4.26
986 1022 2.671963 TTGCTGCTGCCTGCTGAG 60.672 61.111 13.47 0.00 42.27 3.35
987 1023 3.486905 TTGCTGCTGCCTGCTGAGT 62.487 57.895 13.47 0.00 42.27 3.41
1011 1047 1.577328 GCCGACTGATGTGGTGGTTG 61.577 60.000 0.00 0.00 0.00 3.77
1112 1148 1.108776 GCCGTCATCACAGGTACCTA 58.891 55.000 15.80 0.00 0.00 3.08
1117 1153 3.695060 CGTCATCACAGGTACCTACTTCT 59.305 47.826 15.80 0.00 0.00 2.85
1124 1160 6.550163 TCACAGGTACCTACTTCTACTTTCT 58.450 40.000 15.80 0.00 0.00 2.52
1126 1162 5.715753 ACAGGTACCTACTTCTACTTTCTGG 59.284 44.000 15.80 0.00 0.00 3.86
1128 1164 6.210984 CAGGTACCTACTTCTACTTTCTGGTT 59.789 42.308 15.80 0.00 0.00 3.67
1129 1165 6.786461 AGGTACCTACTTCTACTTTCTGGTTT 59.214 38.462 14.41 0.00 0.00 3.27
1133 1169 5.639931 CCTACTTCTACTTTCTGGTTTCAGC 59.360 44.000 0.00 0.00 40.69 4.26
1382 1469 1.515020 CAGAGTTCGCCTCCCTCAG 59.485 63.158 0.00 0.00 41.47 3.35
1401 1488 1.693640 CCTGCCCCTCAACATCCTT 59.306 57.895 0.00 0.00 0.00 3.36
1427 1516 5.924254 TGTAAGAACTAAGAACACATCCACG 59.076 40.000 0.00 0.00 0.00 4.94
1531 1624 5.351465 AGCTTAATTTCTCGCATTTTCTCGA 59.649 36.000 0.00 0.00 0.00 4.04
1575 1668 4.717313 GGGACTGCACCCGTTCCC 62.717 72.222 0.00 0.00 40.49 3.97
1576 1669 4.717313 GGACTGCACCCGTTCCCC 62.717 72.222 0.00 0.00 0.00 4.81
1634 1741 0.589708 GTACACCAAAGTTGTCCGCC 59.410 55.000 0.00 0.00 0.00 6.13
1635 1742 0.881159 TACACCAAAGTTGTCCGCCG 60.881 55.000 0.00 0.00 0.00 6.46
1651 1776 2.436646 CGGGTGCTCATGTGGTCC 60.437 66.667 0.00 0.00 0.00 4.46
1681 1829 2.079925 GAGGTTGATGCTCACCTTGTC 58.920 52.381 0.00 0.00 31.31 3.18
1795 1943 3.550678 GGATCGTTAACGTGTCATCTTCC 59.449 47.826 25.98 15.53 40.80 3.46
1917 2065 0.329261 CCAACCATCTCAAGGCCTCA 59.671 55.000 5.23 0.00 0.00 3.86
1940 2088 5.179182 CACAAAATTGGGGAAGTAACATTGC 59.821 40.000 0.00 0.00 0.00 3.56
1953 2101 0.806868 ACATTGCTCGCCATGTTCTG 59.193 50.000 3.08 0.00 0.00 3.02
1959 2107 1.129437 GCTCGCCATGTTCTGAACTTC 59.871 52.381 20.18 6.89 0.00 3.01
2174 2322 2.613026 TCGTGACAAGCCTTTTCAGA 57.387 45.000 0.00 0.00 0.00 3.27
2275 2424 3.794028 GTGCAAGTAGCTCTGAATCGTAG 59.206 47.826 0.00 0.00 45.94 3.51
2330 2492 2.195922 CTGTTTTTGTGTTGCAGCTCC 58.804 47.619 1.17 0.00 0.00 4.70
2569 4872 5.126779 TCGGCAATTGTAATATAGCCAACA 58.873 37.500 7.40 0.00 42.10 3.33
2612 4915 3.858503 GCAGAATTGGCCAAGAAGTTGTC 60.859 47.826 24.94 11.36 30.95 3.18
2660 4963 1.737838 TGATGTGCCGGTTTCAGATC 58.262 50.000 1.90 7.03 35.52 2.75
2688 4992 3.349488 TGTTCGGTATACGCTCTCATG 57.651 47.619 0.00 0.00 43.86 3.07
2750 5055 4.333649 CAGAAGCACAAGACTTCAAAGTGA 59.666 41.667 0.00 0.00 44.87 3.41
2756 5061 5.008613 GCACAAGACTTCAAAGTGATGGTTA 59.991 40.000 0.00 0.00 39.88 2.85
2771 5076 6.551227 AGTGATGGTTAGTATATCAGAGTGCA 59.449 38.462 0.00 0.00 32.00 4.57
2851 5157 6.974932 TCATGAGAGTTAATGTCTTGCTTC 57.025 37.500 0.00 0.00 0.00 3.86
2853 5159 6.369890 TCATGAGAGTTAATGTCTTGCTTCAC 59.630 38.462 0.00 0.00 0.00 3.18
2854 5160 5.858381 TGAGAGTTAATGTCTTGCTTCACT 58.142 37.500 0.00 0.00 0.00 3.41
2857 5163 5.698545 AGAGTTAATGTCTTGCTTCACTGTC 59.301 40.000 0.00 0.00 0.00 3.51
2861 5167 7.332926 AGTTAATGTCTTGCTTCACTGTCTATG 59.667 37.037 0.00 0.00 0.00 2.23
2862 5168 4.871933 TGTCTTGCTTCACTGTCTATGA 57.128 40.909 0.00 0.00 0.00 2.15
2863 5169 5.213891 TGTCTTGCTTCACTGTCTATGAA 57.786 39.130 0.00 0.00 34.89 2.57
2864 5170 5.610398 TGTCTTGCTTCACTGTCTATGAAA 58.390 37.500 0.00 0.00 35.70 2.69
2865 5171 6.054941 TGTCTTGCTTCACTGTCTATGAAAA 58.945 36.000 0.00 0.00 35.70 2.29
2866 5172 6.203530 TGTCTTGCTTCACTGTCTATGAAAAG 59.796 38.462 0.00 0.00 35.70 2.27
2869 5175 6.942532 TGCTTCACTGTCTATGAAAAGTTT 57.057 33.333 0.00 0.00 35.70 2.66
2877 5186 3.252458 GTCTATGAAAAGTTTGGGCACGT 59.748 43.478 0.00 0.00 0.00 4.49
2881 5190 3.482436 TGAAAAGTTTGGGCACGTCTAT 58.518 40.909 0.00 0.00 0.00 1.98
2926 5235 9.927668 ATTTCTGTTGGTATTATTTTTGGTCTG 57.072 29.630 0.00 0.00 0.00 3.51
2941 5250 4.437682 TGGTCTGGAAGTCTTCACAAAT 57.562 40.909 14.49 0.00 33.76 2.32
2946 5255 4.024048 TCTGGAAGTCTTCACAAATTTCGC 60.024 41.667 14.49 0.00 33.76 4.70
2963 5272 1.097547 CGCCGCCTTGATTGATCCTT 61.098 55.000 0.00 0.00 0.00 3.36
3006 5315 7.235079 TGTGAAAGTAGTTTTAATCCCCATGA 58.765 34.615 0.00 0.00 0.00 3.07
3012 5321 8.803397 AGTAGTTTTAATCCCCATGAAAGTAC 57.197 34.615 0.00 2.74 36.82 2.73
3026 5335 4.503910 TGAAAGTACTCATGTCCAATCCG 58.496 43.478 0.00 0.00 0.00 4.18
3080 5389 1.212935 TGCTCTTCCCTAAATCTGCCC 59.787 52.381 0.00 0.00 0.00 5.36
3081 5390 1.212935 GCTCTTCCCTAAATCTGCCCA 59.787 52.381 0.00 0.00 0.00 5.36
3117 5426 0.391130 GCACCGCTGGAAGTGTCATA 60.391 55.000 1.50 0.00 44.74 2.15
3121 5430 2.093973 ACCGCTGGAAGTGTCATAAGAG 60.094 50.000 1.50 0.00 44.74 2.85
3122 5431 1.929836 CGCTGGAAGTGTCATAAGAGC 59.070 52.381 0.00 0.00 40.27 4.09
3123 5432 2.675032 CGCTGGAAGTGTCATAAGAGCA 60.675 50.000 0.00 0.00 40.27 4.26
3124 5433 3.539604 GCTGGAAGTGTCATAAGAGCAT 58.460 45.455 0.00 0.00 35.30 3.79
3125 5434 3.559242 GCTGGAAGTGTCATAAGAGCATC 59.441 47.826 0.00 0.00 35.30 3.91
3126 5435 4.682859 GCTGGAAGTGTCATAAGAGCATCT 60.683 45.833 0.00 0.00 43.26 2.90
3127 5436 6.475362 GCTGGAAGTGTCATAAGAGCATCTC 61.475 48.000 0.00 0.00 40.70 2.75
3137 5446 2.777969 GAGCATCTCCAACAGGCTG 58.222 57.895 14.16 14.16 34.44 4.85
3138 5447 1.375098 GAGCATCTCCAACAGGCTGC 61.375 60.000 15.89 0.00 34.44 5.25
3139 5448 2.758089 GCATCTCCAACAGGCTGCG 61.758 63.158 15.89 5.93 0.00 5.18
3140 5449 1.078918 CATCTCCAACAGGCTGCGA 60.079 57.895 15.89 6.88 0.00 5.10
3141 5450 0.674581 CATCTCCAACAGGCTGCGAA 60.675 55.000 15.89 0.00 0.00 4.70
3142 5451 0.036732 ATCTCCAACAGGCTGCGAAA 59.963 50.000 15.89 0.00 0.00 3.46
3143 5452 0.036732 TCTCCAACAGGCTGCGAAAT 59.963 50.000 15.89 0.00 0.00 2.17
3144 5453 0.883833 CTCCAACAGGCTGCGAAATT 59.116 50.000 15.89 0.00 0.00 1.82
3145 5454 1.270550 CTCCAACAGGCTGCGAAATTT 59.729 47.619 15.89 0.00 0.00 1.82
3146 5455 1.000385 TCCAACAGGCTGCGAAATTTG 60.000 47.619 15.89 10.21 0.00 2.32
3147 5456 0.785979 CAACAGGCTGCGAAATTTGC 59.214 50.000 15.89 0.00 0.00 3.68
3148 5457 0.664166 AACAGGCTGCGAAATTTGCG 60.664 50.000 15.89 0.39 34.24 4.85
3149 5458 1.802715 CAGGCTGCGAAATTTGCGG 60.803 57.895 9.63 9.63 41.71 5.69
3155 5464 3.288641 CGAAATTTGCGGCGCATC 58.711 55.556 36.69 27.32 38.76 3.91
3156 5465 2.558412 CGAAATTTGCGGCGCATCG 61.558 57.895 36.69 33.89 38.76 3.84
3167 5476 3.084579 CGCATCGCTGGAAGTGTC 58.915 61.111 0.00 0.00 46.69 3.67
3168 5477 1.737735 CGCATCGCTGGAAGTGTCA 60.738 57.895 0.00 0.00 46.69 3.58
3169 5478 1.086067 CGCATCGCTGGAAGTGTCAT 61.086 55.000 0.00 0.00 46.69 3.06
3170 5479 1.802508 CGCATCGCTGGAAGTGTCATA 60.803 52.381 0.00 0.00 46.69 2.15
3171 5480 2.279741 GCATCGCTGGAAGTGTCATAA 58.720 47.619 0.00 0.00 46.69 1.90
3172 5481 2.286294 GCATCGCTGGAAGTGTCATAAG 59.714 50.000 0.00 0.00 46.69 1.73
3173 5482 3.785486 CATCGCTGGAAGTGTCATAAGA 58.215 45.455 0.00 0.00 46.69 2.10
3174 5483 3.510388 TCGCTGGAAGTGTCATAAGAG 57.490 47.619 0.00 0.00 46.69 2.85
3175 5484 1.929836 CGCTGGAAGTGTCATAAGAGC 59.070 52.381 0.00 0.00 40.27 4.09
3176 5485 2.675032 CGCTGGAAGTGTCATAAGAGCA 60.675 50.000 0.00 0.00 40.27 4.26
3177 5486 3.539604 GCTGGAAGTGTCATAAGAGCAT 58.460 45.455 0.00 0.00 35.30 3.79
3178 5487 3.559242 GCTGGAAGTGTCATAAGAGCATC 59.441 47.826 0.00 0.00 35.30 3.91
3179 5488 4.682859 GCTGGAAGTGTCATAAGAGCATCT 60.683 45.833 0.00 0.00 43.26 2.90
3180 5489 6.475362 GCTGGAAGTGTCATAAGAGCATCTC 61.475 48.000 0.00 0.00 40.70 2.75
3190 5499 2.777969 GAGCATCTCCAACAGGCTG 58.222 57.895 14.16 14.16 34.44 4.85
3191 5500 1.375098 GAGCATCTCCAACAGGCTGC 61.375 60.000 15.89 0.00 34.44 5.25
3192 5501 2.758089 GCATCTCCAACAGGCTGCG 61.758 63.158 15.89 5.93 0.00 5.18
3193 5502 1.078918 CATCTCCAACAGGCTGCGA 60.079 57.895 15.89 6.88 0.00 5.10
3194 5503 0.674581 CATCTCCAACAGGCTGCGAA 60.675 55.000 15.89 0.00 0.00 4.70
3195 5504 0.036732 ATCTCCAACAGGCTGCGAAA 59.963 50.000 15.89 0.00 0.00 3.46
3196 5505 0.036732 TCTCCAACAGGCTGCGAAAT 59.963 50.000 15.89 0.00 0.00 2.17
3197 5506 0.883833 CTCCAACAGGCTGCGAAATT 59.116 50.000 15.89 0.00 0.00 1.82
3198 5507 1.270550 CTCCAACAGGCTGCGAAATTT 59.729 47.619 15.89 0.00 0.00 1.82
3199 5508 1.000385 TCCAACAGGCTGCGAAATTTG 60.000 47.619 15.89 10.21 0.00 2.32
3200 5509 0.785979 CAACAGGCTGCGAAATTTGC 59.214 50.000 15.89 0.00 0.00 3.68
3201 5510 0.664166 AACAGGCTGCGAAATTTGCG 60.664 50.000 15.89 0.39 34.24 4.85
3202 5511 1.802715 CAGGCTGCGAAATTTGCGG 60.803 57.895 9.63 9.63 41.71 5.69
3208 5517 3.288641 CGAAATTTGCGGCGCATC 58.711 55.556 36.69 27.32 38.76 3.91
3209 5518 2.558412 CGAAATTTGCGGCGCATCG 61.558 57.895 36.69 33.89 38.76 3.84
3220 5529 3.084579 CGCATCGCTGGAAGTGTC 58.915 61.111 0.00 0.00 46.69 3.67
3221 5530 1.737735 CGCATCGCTGGAAGTGTCA 60.738 57.895 0.00 0.00 46.69 3.58
3222 5531 1.086067 CGCATCGCTGGAAGTGTCAT 61.086 55.000 0.00 0.00 46.69 3.06
3223 5532 1.802508 CGCATCGCTGGAAGTGTCATA 60.803 52.381 0.00 0.00 46.69 2.15
3224 5533 2.279741 GCATCGCTGGAAGTGTCATAA 58.720 47.619 0.00 0.00 46.69 1.90
3225 5534 2.286294 GCATCGCTGGAAGTGTCATAAG 59.714 50.000 0.00 0.00 46.69 1.73
3226 5535 3.785486 CATCGCTGGAAGTGTCATAAGA 58.215 45.455 0.00 0.00 46.69 2.10
3227 5536 3.510388 TCGCTGGAAGTGTCATAAGAG 57.490 47.619 0.00 0.00 46.69 2.85
3228 5537 1.929836 CGCTGGAAGTGTCATAAGAGC 59.070 52.381 0.00 0.00 40.27 4.09
3229 5538 2.675032 CGCTGGAAGTGTCATAAGAGCA 60.675 50.000 0.00 0.00 40.27 4.26
3230 5539 3.539604 GCTGGAAGTGTCATAAGAGCAT 58.460 45.455 0.00 0.00 35.30 3.79
3231 5540 3.559242 GCTGGAAGTGTCATAAGAGCATC 59.441 47.826 0.00 0.00 35.30 3.91
3232 5541 4.682859 GCTGGAAGTGTCATAAGAGCATCT 60.683 45.833 0.00 0.00 43.26 2.90
3233 5542 6.475362 GCTGGAAGTGTCATAAGAGCATCTC 61.475 48.000 0.00 0.00 40.70 2.75
3243 5552 2.777969 GAGCATCTCCAACAGGCTG 58.222 57.895 14.16 14.16 34.44 4.85
3244 5553 1.375098 GAGCATCTCCAACAGGCTGC 61.375 60.000 15.89 0.00 34.44 5.25
3245 5554 2.758089 GCATCTCCAACAGGCTGCG 61.758 63.158 15.89 5.93 0.00 5.18
3246 5555 1.078918 CATCTCCAACAGGCTGCGA 60.079 57.895 15.89 6.88 0.00 5.10
3247 5556 0.674581 CATCTCCAACAGGCTGCGAA 60.675 55.000 15.89 0.00 0.00 4.70
3248 5557 0.036732 ATCTCCAACAGGCTGCGAAA 59.963 50.000 15.89 0.00 0.00 3.46
3249 5558 0.036732 TCTCCAACAGGCTGCGAAAT 59.963 50.000 15.89 0.00 0.00 2.17
3250 5559 0.883833 CTCCAACAGGCTGCGAAATT 59.116 50.000 15.89 0.00 0.00 1.82
3251 5560 1.270550 CTCCAACAGGCTGCGAAATTT 59.729 47.619 15.89 0.00 0.00 1.82
3252 5561 1.000385 TCCAACAGGCTGCGAAATTTG 60.000 47.619 15.89 10.21 0.00 2.32
3253 5562 0.785979 CAACAGGCTGCGAAATTTGC 59.214 50.000 15.89 0.00 0.00 3.68
3254 5563 0.664166 AACAGGCTGCGAAATTTGCG 60.664 50.000 15.89 0.39 34.24 4.85
3255 5564 1.802715 CAGGCTGCGAAATTTGCGG 60.803 57.895 9.63 9.63 41.71 5.69
3261 5570 3.288641 CGAAATTTGCGGCGCATC 58.711 55.556 36.69 27.32 38.76 3.91
3262 5571 2.558412 CGAAATTTGCGGCGCATCG 61.558 57.895 36.69 33.89 38.76 3.84
3273 5582 3.084579 CGCATCGCTGGAAGTGTC 58.915 61.111 0.00 0.00 46.69 3.67
3274 5583 1.737735 CGCATCGCTGGAAGTGTCA 60.738 57.895 0.00 0.00 46.69 3.58
3275 5584 1.086067 CGCATCGCTGGAAGTGTCAT 61.086 55.000 0.00 0.00 46.69 3.06
3276 5585 1.802508 CGCATCGCTGGAAGTGTCATA 60.803 52.381 0.00 0.00 46.69 2.15
3277 5586 2.279741 GCATCGCTGGAAGTGTCATAA 58.720 47.619 0.00 0.00 46.69 1.90
3278 5587 2.286294 GCATCGCTGGAAGTGTCATAAG 59.714 50.000 0.00 0.00 46.69 1.73
3279 5588 3.785486 CATCGCTGGAAGTGTCATAAGA 58.215 45.455 0.00 0.00 46.69 2.10
3280 5589 3.510388 TCGCTGGAAGTGTCATAAGAG 57.490 47.619 0.00 0.00 46.69 2.85
3281 5590 1.929836 CGCTGGAAGTGTCATAAGAGC 59.070 52.381 0.00 0.00 40.27 4.09
3282 5591 2.675032 CGCTGGAAGTGTCATAAGAGCA 60.675 50.000 0.00 0.00 40.27 4.26
3283 5592 3.539604 GCTGGAAGTGTCATAAGAGCAT 58.460 45.455 0.00 0.00 35.30 3.79
3284 5593 3.559242 GCTGGAAGTGTCATAAGAGCATC 59.441 47.826 0.00 0.00 35.30 3.91
3285 5594 4.682859 GCTGGAAGTGTCATAAGAGCATCT 60.683 45.833 0.00 0.00 43.26 2.90
3286 5595 6.475362 GCTGGAAGTGTCATAAGAGCATCTC 61.475 48.000 0.00 0.00 40.70 2.75
3296 5605 2.777969 GAGCATCTCCAACAGGCTG 58.222 57.895 14.16 14.16 34.44 4.85
3297 5606 1.375098 GAGCATCTCCAACAGGCTGC 61.375 60.000 15.89 0.00 34.44 5.25
3298 5607 2.758089 GCATCTCCAACAGGCTGCG 61.758 63.158 15.89 5.93 0.00 5.18
3299 5608 1.078918 CATCTCCAACAGGCTGCGA 60.079 57.895 15.89 6.88 0.00 5.10
3300 5609 1.088340 CATCTCCAACAGGCTGCGAG 61.088 60.000 15.89 16.34 0.00 5.03
3301 5610 1.260538 ATCTCCAACAGGCTGCGAGA 61.261 55.000 23.58 23.58 34.29 4.04
3302 5611 1.447489 CTCCAACAGGCTGCGAGAG 60.447 63.158 15.89 13.61 0.00 3.20
3303 5612 2.435586 CCAACAGGCTGCGAGAGG 60.436 66.667 15.89 5.66 0.00 3.69
3315 5624 2.279252 GAGAGGCCGCGCGAAATA 60.279 61.111 34.63 0.00 0.00 1.40
3316 5625 1.881252 GAGAGGCCGCGCGAAATAA 60.881 57.895 34.63 0.00 0.00 1.40
3317 5626 1.426041 GAGAGGCCGCGCGAAATAAA 61.426 55.000 34.63 0.00 0.00 1.40
3318 5627 0.814010 AGAGGCCGCGCGAAATAAAT 60.814 50.000 34.63 9.46 0.00 1.40
3319 5628 0.028902 GAGGCCGCGCGAAATAAATT 59.971 50.000 34.63 7.31 0.00 1.82
3320 5629 0.454196 AGGCCGCGCGAAATAAATTT 59.546 45.000 34.63 2.70 0.00 1.82
3321 5630 0.570272 GGCCGCGCGAAATAAATTTG 59.430 50.000 34.63 11.51 0.00 2.32
3322 5631 0.570272 GCCGCGCGAAATAAATTTGG 59.430 50.000 34.63 10.92 0.00 3.28
3323 5632 0.570272 CCGCGCGAAATAAATTTGGC 59.430 50.000 34.63 11.15 44.60 4.52
3324 5633 0.570272 CGCGCGAAATAAATTTGGCC 59.430 50.000 28.94 0.00 45.03 5.36
3325 5634 0.927537 GCGCGAAATAAATTTGGCCC 59.072 50.000 12.10 4.58 45.03 5.80
3326 5635 1.566404 CGCGAAATAAATTTGGCCCC 58.434 50.000 0.00 0.00 45.03 5.80
3327 5636 1.136110 CGCGAAATAAATTTGGCCCCT 59.864 47.619 0.00 0.00 45.03 4.79
3328 5637 2.798145 CGCGAAATAAATTTGGCCCCTC 60.798 50.000 0.00 0.00 45.03 4.30
3329 5638 2.798145 GCGAAATAAATTTGGCCCCTCG 60.798 50.000 0.00 2.36 43.02 4.63
3330 5639 2.798145 CGAAATAAATTTGGCCCCTCGC 60.798 50.000 0.00 0.00 0.00 5.03
3331 5640 0.744281 AATAAATTTGGCCCCTCGCG 59.256 50.000 0.00 0.00 38.94 5.87
3332 5641 1.734388 ATAAATTTGGCCCCTCGCGC 61.734 55.000 0.00 0.00 38.94 6.86
3348 5657 4.426112 GCAGGGAAAAGCGGCAGC 62.426 66.667 0.00 0.00 45.58 5.25
3361 5670 4.084888 GCAGCGCGCGGTAGTTTT 62.085 61.111 35.47 6.21 0.00 2.43
3362 5671 2.202171 CAGCGCGCGGTAGTTTTG 60.202 61.111 35.47 17.48 0.00 2.44
3363 5672 4.084888 AGCGCGCGGTAGTTTTGC 62.085 61.111 35.23 11.80 0.00 3.68
3369 5678 4.787299 CGGTAGTTTTGCCGCGCG 62.787 66.667 25.67 25.67 45.45 6.86
3370 5679 3.416382 GGTAGTTTTGCCGCGCGA 61.416 61.111 34.63 9.90 0.00 5.87
3371 5680 2.746803 GGTAGTTTTGCCGCGCGAT 61.747 57.895 34.63 10.04 0.00 4.58
3372 5681 1.580132 GTAGTTTTGCCGCGCGATG 60.580 57.895 34.63 17.45 0.00 3.84
3373 5682 3.375500 TAGTTTTGCCGCGCGATGC 62.375 57.895 34.63 27.30 41.47 3.91
3390 5699 2.185867 CCTAGCGCGCTGGGTTAA 59.814 61.111 44.42 24.88 39.49 2.01
3391 5700 1.448893 CCTAGCGCGCTGGGTTAAA 60.449 57.895 44.42 24.17 39.49 1.52
3392 5701 1.022451 CCTAGCGCGCTGGGTTAAAA 61.022 55.000 44.42 23.44 39.49 1.52
3393 5702 0.373716 CTAGCGCGCTGGGTTAAAAG 59.626 55.000 41.85 24.97 0.00 2.27
3394 5703 1.641123 TAGCGCGCTGGGTTAAAAGC 61.641 55.000 41.85 3.17 36.03 3.51
3395 5704 2.950673 CGCGCTGGGTTAAAAGCA 59.049 55.556 5.56 0.00 39.47 3.91
3396 5705 1.284408 CGCGCTGGGTTAAAAGCAA 59.716 52.632 5.56 0.00 39.47 3.91
3397 5706 1.001745 CGCGCTGGGTTAAAAGCAAC 61.002 55.000 5.56 0.00 39.47 4.17
3398 5707 1.001745 GCGCTGGGTTAAAAGCAACG 61.002 55.000 0.00 0.00 39.47 4.10
3399 5708 1.001745 CGCTGGGTTAAAAGCAACGC 61.002 55.000 6.80 0.00 39.47 4.84
3400 5709 1.001745 GCTGGGTTAAAAGCAACGCG 61.002 55.000 3.53 3.53 42.53 6.01
3401 5710 1.001745 CTGGGTTAAAAGCAACGCGC 61.002 55.000 5.73 0.00 42.53 6.86
3402 5711 1.731613 GGGTTAAAAGCAACGCGCC 60.732 57.895 5.73 0.00 44.04 6.53
3403 5712 1.284715 GGTTAAAAGCAACGCGCCT 59.715 52.632 5.73 0.00 44.04 5.52
3404 5713 1.001745 GGTTAAAAGCAACGCGCCTG 61.002 55.000 5.73 4.98 44.04 4.85
3405 5714 1.371145 TTAAAAGCAACGCGCCTGC 60.371 52.632 22.36 22.36 44.04 4.85
3406 5715 2.064723 TTAAAAGCAACGCGCCTGCA 62.065 50.000 28.79 11.00 44.04 4.41
3407 5716 2.725275 TAAAAGCAACGCGCCTGCAC 62.725 55.000 28.79 7.28 44.04 4.57
3425 5734 4.038080 CCGCCAACCGCCAGAAAC 62.038 66.667 0.00 0.00 35.03 2.78
3426 5735 2.978010 CGCCAACCGCCAGAAACT 60.978 61.111 0.00 0.00 0.00 2.66
3427 5736 2.551912 CGCCAACCGCCAGAAACTT 61.552 57.895 0.00 0.00 0.00 2.66
3428 5737 1.285950 GCCAACCGCCAGAAACTTC 59.714 57.895 0.00 0.00 0.00 3.01
3429 5738 1.452145 GCCAACCGCCAGAAACTTCA 61.452 55.000 0.00 0.00 0.00 3.02
3430 5739 0.310854 CCAACCGCCAGAAACTTCAC 59.689 55.000 0.00 0.00 0.00 3.18
3431 5740 1.308998 CAACCGCCAGAAACTTCACT 58.691 50.000 0.00 0.00 0.00 3.41
3432 5741 1.264288 CAACCGCCAGAAACTTCACTC 59.736 52.381 0.00 0.00 0.00 3.51
3433 5742 0.250338 ACCGCCAGAAACTTCACTCC 60.250 55.000 0.00 0.00 0.00 3.85
3434 5743 0.955919 CCGCCAGAAACTTCACTCCC 60.956 60.000 0.00 0.00 0.00 4.30
3435 5744 1.291877 CGCCAGAAACTTCACTCCCG 61.292 60.000 0.00 0.00 0.00 5.14
3436 5745 0.250338 GCCAGAAACTTCACTCCCGT 60.250 55.000 0.00 0.00 0.00 5.28
3437 5746 1.797025 CCAGAAACTTCACTCCCGTC 58.203 55.000 0.00 0.00 0.00 4.79
3438 5747 1.419374 CAGAAACTTCACTCCCGTCG 58.581 55.000 0.00 0.00 0.00 5.12
3439 5748 1.038280 AGAAACTTCACTCCCGTCGT 58.962 50.000 0.00 0.00 0.00 4.34
3440 5749 1.000496 AGAAACTTCACTCCCGTCGTC 60.000 52.381 0.00 0.00 0.00 4.20
3441 5750 0.318445 AAACTTCACTCCCGTCGTCG 60.318 55.000 0.00 0.00 0.00 5.12
3442 5751 2.504244 CTTCACTCCCGTCGTCGC 60.504 66.667 0.00 0.00 35.54 5.19
3443 5752 3.966026 CTTCACTCCCGTCGTCGCC 62.966 68.421 0.00 0.00 35.54 5.54
3452 5761 4.719369 GTCGTCGCCACGCCTTCT 62.719 66.667 0.00 0.00 46.28 2.85
3453 5762 4.415332 TCGTCGCCACGCCTTCTC 62.415 66.667 0.00 0.00 46.28 2.87
3454 5763 4.421479 CGTCGCCACGCCTTCTCT 62.421 66.667 0.00 0.00 39.69 3.10
3455 5764 2.048127 GTCGCCACGCCTTCTCTT 60.048 61.111 0.00 0.00 0.00 2.85
3456 5765 2.095252 GTCGCCACGCCTTCTCTTC 61.095 63.158 0.00 0.00 0.00 2.87
3457 5766 2.815647 CGCCACGCCTTCTCTTCC 60.816 66.667 0.00 0.00 0.00 3.46
3458 5767 2.436824 GCCACGCCTTCTCTTCCC 60.437 66.667 0.00 0.00 0.00 3.97
3459 5768 2.125512 CCACGCCTTCTCTTCCCG 60.126 66.667 0.00 0.00 0.00 5.14
3460 5769 2.815647 CACGCCTTCTCTTCCCGC 60.816 66.667 0.00 0.00 0.00 6.13
3461 5770 4.083862 ACGCCTTCTCTTCCCGCC 62.084 66.667 0.00 0.00 0.00 6.13
3462 5771 3.775654 CGCCTTCTCTTCCCGCCT 61.776 66.667 0.00 0.00 0.00 5.52
3463 5772 2.188207 GCCTTCTCTTCCCGCCTC 59.812 66.667 0.00 0.00 0.00 4.70
3464 5773 2.363172 GCCTTCTCTTCCCGCCTCT 61.363 63.158 0.00 0.00 0.00 3.69
3465 5774 1.904990 GCCTTCTCTTCCCGCCTCTT 61.905 60.000 0.00 0.00 0.00 2.85
3466 5775 0.615850 CCTTCTCTTCCCGCCTCTTT 59.384 55.000 0.00 0.00 0.00 2.52
3467 5776 1.406205 CCTTCTCTTCCCGCCTCTTTC 60.406 57.143 0.00 0.00 0.00 2.62
3468 5777 1.276421 CTTCTCTTCCCGCCTCTTTCA 59.724 52.381 0.00 0.00 0.00 2.69
3469 5778 0.898320 TCTCTTCCCGCCTCTTTCAG 59.102 55.000 0.00 0.00 0.00 3.02
3470 5779 0.610687 CTCTTCCCGCCTCTTTCAGT 59.389 55.000 0.00 0.00 0.00 3.41
3471 5780 0.321671 TCTTCCCGCCTCTTTCAGTG 59.678 55.000 0.00 0.00 0.00 3.66
3472 5781 1.301677 CTTCCCGCCTCTTTCAGTGC 61.302 60.000 0.00 0.00 0.00 4.40
3473 5782 1.768684 TTCCCGCCTCTTTCAGTGCT 61.769 55.000 0.00 0.00 0.00 4.40
3474 5783 1.743252 CCCGCCTCTTTCAGTGCTC 60.743 63.158 0.00 0.00 0.00 4.26
3475 5784 1.743252 CCGCCTCTTTCAGTGCTCC 60.743 63.158 0.00 0.00 0.00 4.70
3476 5785 2.097038 CGCCTCTTTCAGTGCTCCG 61.097 63.158 0.00 0.00 0.00 4.63
3477 5786 2.394563 GCCTCTTTCAGTGCTCCGC 61.395 63.158 0.00 0.00 0.00 5.54
3478 5787 1.743252 CCTCTTTCAGTGCTCCGCC 60.743 63.158 0.00 0.00 0.00 6.13
3479 5788 1.004560 CTCTTTCAGTGCTCCGCCA 60.005 57.895 0.00 0.00 0.00 5.69
3480 5789 0.392193 CTCTTTCAGTGCTCCGCCAT 60.392 55.000 0.00 0.00 0.00 4.40
3481 5790 0.036732 TCTTTCAGTGCTCCGCCATT 59.963 50.000 0.00 0.00 0.00 3.16
3482 5791 0.169672 CTTTCAGTGCTCCGCCATTG 59.830 55.000 0.00 0.00 0.00 2.82
3483 5792 1.865788 TTTCAGTGCTCCGCCATTGC 61.866 55.000 0.00 0.00 0.00 3.56
3484 5793 3.818787 CAGTGCTCCGCCATTGCC 61.819 66.667 0.00 0.00 0.00 4.52
3492 5801 4.481112 CGCCATTGCCGTGCCTTC 62.481 66.667 0.00 0.00 0.00 3.46
3493 5802 3.064324 GCCATTGCCGTGCCTTCT 61.064 61.111 0.00 0.00 0.00 2.85
3494 5803 3.056313 GCCATTGCCGTGCCTTCTC 62.056 63.158 0.00 0.00 0.00 2.87
3495 5804 1.377725 CCATTGCCGTGCCTTCTCT 60.378 57.895 0.00 0.00 0.00 3.10
3496 5805 0.962356 CCATTGCCGTGCCTTCTCTT 60.962 55.000 0.00 0.00 0.00 2.85
3497 5806 0.449388 CATTGCCGTGCCTTCTCTTC 59.551 55.000 0.00 0.00 0.00 2.87
3498 5807 0.678048 ATTGCCGTGCCTTCTCTTCC 60.678 55.000 0.00 0.00 0.00 3.46
3499 5808 2.436824 GCCGTGCCTTCTCTTCCC 60.437 66.667 0.00 0.00 0.00 3.97
3500 5809 2.125512 CCGTGCCTTCTCTTCCCG 60.126 66.667 0.00 0.00 0.00 5.14
3501 5810 2.815647 CGTGCCTTCTCTTCCCGC 60.816 66.667 0.00 0.00 0.00 6.13
3502 5811 2.436824 GTGCCTTCTCTTCCCGCC 60.437 66.667 0.00 0.00 0.00 6.13
3503 5812 2.607750 TGCCTTCTCTTCCCGCCT 60.608 61.111 0.00 0.00 0.00 5.52
3504 5813 2.188207 GCCTTCTCTTCCCGCCTC 59.812 66.667 0.00 0.00 0.00 4.70
3505 5814 2.363172 GCCTTCTCTTCCCGCCTCT 61.363 63.158 0.00 0.00 0.00 3.69
3506 5815 1.904990 GCCTTCTCTTCCCGCCTCTT 61.905 60.000 0.00 0.00 0.00 2.85
3507 5816 0.615850 CCTTCTCTTCCCGCCTCTTT 59.384 55.000 0.00 0.00 0.00 2.52
3508 5817 1.406205 CCTTCTCTTCCCGCCTCTTTC 60.406 57.143 0.00 0.00 0.00 2.62
3509 5818 1.276421 CTTCTCTTCCCGCCTCTTTCA 59.724 52.381 0.00 0.00 0.00 2.69
3510 5819 0.898320 TCTCTTCCCGCCTCTTTCAG 59.102 55.000 0.00 0.00 0.00 3.02
3511 5820 0.610687 CTCTTCCCGCCTCTTTCAGT 59.389 55.000 0.00 0.00 0.00 3.41
3512 5821 0.321671 TCTTCCCGCCTCTTTCAGTG 59.678 55.000 0.00 0.00 0.00 3.66
3513 5822 1.301677 CTTCCCGCCTCTTTCAGTGC 61.302 60.000 0.00 0.00 0.00 4.40
3514 5823 1.768684 TTCCCGCCTCTTTCAGTGCT 61.769 55.000 0.00 0.00 0.00 4.40
3515 5824 1.743252 CCCGCCTCTTTCAGTGCTC 60.743 63.158 0.00 0.00 0.00 4.26
3516 5825 1.294780 CCGCCTCTTTCAGTGCTCT 59.705 57.895 0.00 0.00 0.00 4.09
3517 5826 1.018226 CCGCCTCTTTCAGTGCTCTG 61.018 60.000 9.54 9.54 42.54 3.35
3518 5827 1.633852 CGCCTCTTTCAGTGCTCTGC 61.634 60.000 10.95 0.00 41.10 4.26
3519 5828 1.304509 GCCTCTTTCAGTGCTCTGCC 61.305 60.000 10.95 0.00 41.10 4.85
3520 5829 0.035881 CCTCTTTCAGTGCTCTGCCA 59.964 55.000 10.95 0.00 41.10 4.92
3521 5830 1.155042 CTCTTTCAGTGCTCTGCCAC 58.845 55.000 10.95 0.00 41.10 5.01
3522 5831 0.250467 TCTTTCAGTGCTCTGCCACC 60.250 55.000 10.95 0.00 41.10 4.61
3523 5832 1.572085 CTTTCAGTGCTCTGCCACCG 61.572 60.000 10.95 0.00 41.10 4.94
3524 5833 4.687215 TCAGTGCTCTGCCACCGC 62.687 66.667 10.95 0.00 41.10 5.68
3539 5848 3.423154 CGCCGCGCCTTCTTTCTT 61.423 61.111 0.00 0.00 0.00 2.52
3540 5849 2.481009 GCCGCGCCTTCTTTCTTC 59.519 61.111 0.00 0.00 0.00 2.87
3541 5850 2.778679 CCGCGCCTTCTTTCTTCG 59.221 61.111 0.00 0.00 0.00 3.79
3542 5851 2.096594 CGCGCCTTCTTTCTTCGC 59.903 61.111 0.00 0.00 42.05 4.70
3543 5852 2.481009 GCGCCTTCTTTCTTCGCC 59.519 61.111 0.00 0.00 39.91 5.54
3544 5853 2.035442 GCGCCTTCTTTCTTCGCCT 61.035 57.895 0.00 0.00 39.91 5.52
3545 5854 1.972027 GCGCCTTCTTTCTTCGCCTC 61.972 60.000 0.00 0.00 39.91 4.70
3546 5855 0.390472 CGCCTTCTTTCTTCGCCTCT 60.390 55.000 0.00 0.00 0.00 3.69
3547 5856 1.814793 GCCTTCTTTCTTCGCCTCTT 58.185 50.000 0.00 0.00 0.00 2.85
3548 5857 1.735018 GCCTTCTTTCTTCGCCTCTTC 59.265 52.381 0.00 0.00 0.00 2.87
3549 5858 2.351455 CCTTCTTTCTTCGCCTCTTCC 58.649 52.381 0.00 0.00 0.00 3.46
3550 5859 2.289694 CCTTCTTTCTTCGCCTCTTCCA 60.290 50.000 0.00 0.00 0.00 3.53
3551 5860 2.751166 TCTTTCTTCGCCTCTTCCAG 57.249 50.000 0.00 0.00 0.00 3.86
3552 5861 1.082690 CTTTCTTCGCCTCTTCCAGC 58.917 55.000 0.00 0.00 0.00 4.85
3553 5862 0.687354 TTTCTTCGCCTCTTCCAGCT 59.313 50.000 0.00 0.00 0.00 4.24
3554 5863 0.247736 TTCTTCGCCTCTTCCAGCTC 59.752 55.000 0.00 0.00 0.00 4.09
3555 5864 1.153469 CTTCGCCTCTTCCAGCTCC 60.153 63.158 0.00 0.00 0.00 4.70
3556 5865 2.585791 CTTCGCCTCTTCCAGCTCCC 62.586 65.000 0.00 0.00 0.00 4.30
3557 5866 4.168291 CGCCTCTTCCAGCTCCCC 62.168 72.222 0.00 0.00 0.00 4.81
3558 5867 4.168291 GCCTCTTCCAGCTCCCCG 62.168 72.222 0.00 0.00 0.00 5.73
3559 5868 4.168291 CCTCTTCCAGCTCCCCGC 62.168 72.222 0.00 0.00 39.57 6.13
3585 5894 4.814294 CGCCTTCTTCCCCGTCGG 62.814 72.222 3.60 3.60 0.00 4.79
3586 5895 3.703127 GCCTTCTTCCCCGTCGGT 61.703 66.667 11.06 0.00 0.00 4.69
3587 5896 3.066198 CCTTCTTCCCCGTCGGTT 58.934 61.111 11.06 0.00 0.00 4.44
3588 5897 1.079336 CCTTCTTCCCCGTCGGTTC 60.079 63.158 11.06 0.00 0.00 3.62
3589 5898 1.079336 CTTCTTCCCCGTCGGTTCC 60.079 63.158 11.06 0.00 0.00 3.62
3590 5899 1.823169 CTTCTTCCCCGTCGGTTCCA 61.823 60.000 11.06 0.00 0.00 3.53
3591 5900 1.409251 TTCTTCCCCGTCGGTTCCAA 61.409 55.000 11.06 0.00 0.00 3.53
3592 5901 1.670083 CTTCCCCGTCGGTTCCAAC 60.670 63.158 11.06 0.00 0.00 3.77
3593 5902 2.386064 CTTCCCCGTCGGTTCCAACA 62.386 60.000 11.06 0.00 0.00 3.33
3594 5903 2.663423 TTCCCCGTCGGTTCCAACAC 62.663 60.000 11.06 0.00 0.00 3.32
3595 5904 2.667199 CCCGTCGGTTCCAACACC 60.667 66.667 11.06 0.00 0.00 4.16
3596 5905 2.667199 CCGTCGGTTCCAACACCC 60.667 66.667 2.08 0.00 32.48 4.61
3597 5906 2.667199 CGTCGGTTCCAACACCCC 60.667 66.667 0.00 0.00 32.48 4.95
3598 5907 2.281970 GTCGGTTCCAACACCCCC 60.282 66.667 0.00 0.00 32.48 5.40
3599 5908 3.943691 TCGGTTCCAACACCCCCG 61.944 66.667 0.00 0.00 39.98 5.73
3602 5911 4.589675 GTTCCAACACCCCCGCCA 62.590 66.667 0.00 0.00 0.00 5.69
3603 5912 4.589675 TTCCAACACCCCCGCCAC 62.590 66.667 0.00 0.00 0.00 5.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
202 203 1.078637 GGTTAGCCCCTCGGTGAAC 60.079 63.158 0.00 0.00 0.00 3.18
268 269 2.505498 GCGGACGCTGTACATCACG 61.505 63.158 9.76 10.46 38.26 4.35
514 515 0.027194 TATCTTCGTCTTCGTCGGCG 59.973 55.000 1.15 1.15 38.33 6.46
516 517 3.670311 TCTTATCTTCGTCTTCGTCGG 57.330 47.619 0.00 0.00 38.33 4.79
518 519 5.232610 TCCTTCTTATCTTCGTCTTCGTC 57.767 43.478 0.00 0.00 38.33 4.20
522 523 6.800072 AGGAATCCTTCTTATCTTCGTCTT 57.200 37.500 0.00 0.00 0.00 3.01
523 524 7.291566 TCTAGGAATCCTTCTTATCTTCGTCT 58.708 38.462 7.30 0.00 34.61 4.18
555 556 3.188100 ATCACACGCGACGGCATG 61.188 61.111 15.93 0.68 38.56 4.06
556 557 3.188100 CATCACACGCGACGGCAT 61.188 61.111 15.93 0.00 39.92 4.40
565 566 2.788176 CGTACGCAGCCATCACACG 61.788 63.158 0.52 0.00 0.00 4.49
589 595 5.941948 AACTACTGGAGTAAAACATGCAC 57.058 39.130 0.00 0.00 37.44 4.57
629 638 1.412343 ACATGGCCAAAATATTCGGGC 59.588 47.619 10.96 18.51 45.67 6.13
662 671 2.543641 TGCATTCGCTGACATCTACTG 58.456 47.619 0.00 0.00 39.64 2.74
690 704 4.722194 CGCAAGTAAATGTGCATACAGTT 58.278 39.130 0.00 0.00 45.85 3.16
691 705 4.340894 CGCAAGTAAATGTGCATACAGT 57.659 40.909 0.00 0.00 40.79 3.55
717 731 2.557924 AGTCCCATCACAAACGTACGTA 59.442 45.455 23.12 5.71 0.00 3.57
754 769 5.108385 TCGAATTTGGAAACTTTCAGCTC 57.892 39.130 3.93 0.00 0.00 4.09
808 823 1.450025 GGTGGATTCGGAACTGAACC 58.550 55.000 0.00 3.86 0.00 3.62
872 888 2.033755 GTGAGCTCAGCACTGCCAG 61.034 63.158 18.89 0.00 33.57 4.85
928 951 1.876156 GGCTCATGATTGGATTCCGAC 59.124 52.381 0.00 0.00 0.00 4.79
944 967 1.301479 AACAAGTTCGGACGGGCTC 60.301 57.895 0.00 0.00 0.00 4.70
981 1017 4.385405 AGTCGGCCAGCACTCAGC 62.385 66.667 2.24 0.00 46.19 4.26
982 1018 2.236223 ATCAGTCGGCCAGCACTCAG 62.236 60.000 2.24 0.00 0.00 3.35
983 1019 2.285773 ATCAGTCGGCCAGCACTCA 61.286 57.895 2.24 0.00 0.00 3.41
984 1020 1.812922 CATCAGTCGGCCAGCACTC 60.813 63.158 2.24 0.00 0.00 3.51
985 1021 2.267006 CATCAGTCGGCCAGCACT 59.733 61.111 2.24 0.00 0.00 4.40
986 1022 2.046892 ACATCAGTCGGCCAGCAC 60.047 61.111 2.24 0.00 0.00 4.40
987 1023 2.046988 CACATCAGTCGGCCAGCA 60.047 61.111 2.24 0.00 0.00 4.41
1011 1047 4.484872 GAGGGCCCCTTGCGGTAC 62.485 72.222 21.43 0.00 42.61 3.34
1112 1148 4.390264 GGCTGAAACCAGAAAGTAGAAGT 58.610 43.478 0.00 0.00 33.56 3.01
1117 1153 2.103432 TCACGGCTGAAACCAGAAAGTA 59.897 45.455 0.00 0.00 33.56 2.24
1162 1249 3.978723 CTCTCGACGCACCTGCAGG 62.979 68.421 31.60 31.60 42.21 4.85
1309 1396 2.433838 CAGCTCCAGCACGTCCAG 60.434 66.667 0.48 0.00 45.16 3.86
1382 1469 2.440980 GGATGTTGAGGGGCAGGC 60.441 66.667 0.00 0.00 0.00 4.85
1401 1488 7.758076 CGTGGATGTGTTCTTAGTTCTTACATA 59.242 37.037 0.00 0.00 0.00 2.29
1427 1516 1.561542 AGAGGTGGATGGGATGTTGTC 59.438 52.381 0.00 0.00 0.00 3.18
1472 1565 1.734465 CCAATGGCGAGTTCTCTGTTC 59.266 52.381 0.00 0.00 0.00 3.18
1575 1668 3.905678 CAGCTCTAGGCCGTCGGG 61.906 72.222 14.38 0.00 43.05 5.14
1576 1669 4.577246 GCAGCTCTAGGCCGTCGG 62.577 72.222 6.99 6.99 43.05 4.79
1634 1741 2.436646 GGACCACATGAGCACCCG 60.437 66.667 0.00 0.00 0.00 5.28
1635 1742 2.436646 CGGACCACATGAGCACCC 60.437 66.667 0.00 0.00 0.00 4.61
1651 1776 3.525537 AGCATCAACCTCATAACTCACG 58.474 45.455 0.00 0.00 0.00 4.35
1681 1829 1.721664 CTGCCATGCCATTGGAGTCG 61.722 60.000 6.95 0.00 39.25 4.18
1765 1913 2.928116 CACGTTAACGATCCTTCCTTCC 59.072 50.000 33.06 0.00 43.02 3.46
1766 1914 3.582780 ACACGTTAACGATCCTTCCTTC 58.417 45.455 33.06 0.00 43.02 3.46
1795 1943 1.066143 GGGTAGGTCATGATATGCCCG 60.066 57.143 16.81 0.00 32.49 6.13
1917 2065 5.071653 AGCAATGTTACTTCCCCAATTTTGT 59.928 36.000 0.00 0.00 0.00 2.83
1940 2088 2.158449 GTGAAGTTCAGAACATGGCGAG 59.842 50.000 15.85 0.00 0.00 5.03
1953 2101 2.033424 GGCTGTTGAACCTGTGAAGTTC 59.967 50.000 0.00 0.00 43.20 3.01
1959 2107 1.901591 ATGAGGCTGTTGAACCTGTG 58.098 50.000 0.00 0.00 36.05 3.66
2103 2251 2.162681 GTTGACCCCTTCATCCTGTTG 58.837 52.381 0.00 0.00 32.84 3.33
2174 2322 1.238439 CGCTCACAATGGTCCTGTTT 58.762 50.000 0.00 0.00 0.00 2.83
2203 2351 8.555361 GCTCATAAGACCAATTTCTAGTGATTC 58.445 37.037 0.00 0.00 0.00 2.52
2275 2424 3.059352 ACCAGAACTACCAGCACAATC 57.941 47.619 0.00 0.00 0.00 2.67
2330 2492 1.890876 TCTTCCAACGGTGTTCATGG 58.109 50.000 0.00 0.00 0.00 3.66
2437 4739 3.220507 TCTTCAGCCATTGAAAATGCG 57.779 42.857 0.00 0.00 44.84 4.73
2441 4743 6.580788 TGATGTTTTCTTCAGCCATTGAAAA 58.419 32.000 0.00 0.00 44.84 2.29
2612 4915 3.061831 CACTATCTGCAAGCTGAAGTTCG 59.938 47.826 5.74 0.00 0.00 3.95
2660 4963 5.234329 AGAGCGTATACCGAACAATCATTTG 59.766 40.000 0.00 0.00 39.56 2.32
2688 4992 5.444745 GCAGTCGAACATAAAAGTAGCAGAC 60.445 44.000 0.00 0.00 0.00 3.51
2750 5055 6.985653 ACTGCACTCTGATATACTAACCAT 57.014 37.500 0.00 0.00 0.00 3.55
2756 5061 5.655488 GACACAACTGCACTCTGATATACT 58.345 41.667 0.00 0.00 0.00 2.12
2844 5150 6.551385 ACTTTTCATAGACAGTGAAGCAAG 57.449 37.500 0.00 0.00 36.96 4.01
2851 5157 4.278170 TGCCCAAACTTTTCATAGACAGTG 59.722 41.667 0.00 0.00 0.00 3.66
2853 5159 4.613622 CGTGCCCAAACTTTTCATAGACAG 60.614 45.833 0.00 0.00 0.00 3.51
2854 5160 3.252215 CGTGCCCAAACTTTTCATAGACA 59.748 43.478 0.00 0.00 0.00 3.41
2857 5163 3.502211 AGACGTGCCCAAACTTTTCATAG 59.498 43.478 0.00 0.00 0.00 2.23
2861 5167 4.226761 CAATAGACGTGCCCAAACTTTTC 58.773 43.478 0.00 0.00 0.00 2.29
2862 5168 3.634910 ACAATAGACGTGCCCAAACTTTT 59.365 39.130 0.00 0.00 0.00 2.27
2863 5169 3.219281 ACAATAGACGTGCCCAAACTTT 58.781 40.909 0.00 0.00 0.00 2.66
2864 5170 2.812011 GACAATAGACGTGCCCAAACTT 59.188 45.455 0.00 0.00 0.00 2.66
2865 5171 2.038557 AGACAATAGACGTGCCCAAACT 59.961 45.455 0.00 0.00 0.00 2.66
2866 5172 2.159627 CAGACAATAGACGTGCCCAAAC 59.840 50.000 0.00 0.00 0.00 2.93
2869 5175 0.973632 ACAGACAATAGACGTGCCCA 59.026 50.000 0.00 0.00 0.00 5.36
2926 5235 3.565516 GGCGAAATTTGTGAAGACTTCC 58.434 45.455 12.66 4.94 0.00 3.46
2941 5250 0.732571 GATCAATCAAGGCGGCGAAA 59.267 50.000 12.98 0.00 0.00 3.46
2946 5255 1.202336 GCAAAGGATCAATCAAGGCGG 60.202 52.381 0.00 0.00 0.00 6.13
2963 5272 4.311606 TCACATTTGTTCTACGCTAGCAA 58.688 39.130 16.45 0.55 0.00 3.91
3006 5315 4.553330 ACGGATTGGACATGAGTACTTT 57.447 40.909 0.00 0.00 0.00 2.66
3012 5321 7.786178 TTCTTAAATACGGATTGGACATGAG 57.214 36.000 0.00 0.00 0.00 2.90
3080 5389 1.403679 TGCAACCGGTGAAGAAGTTTG 59.596 47.619 8.52 0.00 0.00 2.93
3081 5390 1.404035 GTGCAACCGGTGAAGAAGTTT 59.596 47.619 8.52 0.00 0.00 2.66
3103 5412 2.977914 TGCTCTTATGACACTTCCAGC 58.022 47.619 0.00 0.00 0.00 4.85
3104 5413 5.021033 AGATGCTCTTATGACACTTCCAG 57.979 43.478 0.00 0.00 0.00 3.86
3117 5426 0.990374 AGCCTGTTGGAGATGCTCTT 59.010 50.000 0.00 0.00 34.57 2.85
3121 5430 2.758089 CGCAGCCTGTTGGAGATGC 61.758 63.158 0.00 0.00 36.28 3.91
3122 5431 0.674581 TTCGCAGCCTGTTGGAGATG 60.675 55.000 0.00 0.00 34.57 2.90
3123 5432 0.036732 TTTCGCAGCCTGTTGGAGAT 59.963 50.000 0.00 0.00 34.57 2.75
3124 5433 0.036732 ATTTCGCAGCCTGTTGGAGA 59.963 50.000 0.00 0.00 34.57 3.71
3125 5434 0.883833 AATTTCGCAGCCTGTTGGAG 59.116 50.000 0.00 0.00 34.57 3.86
3126 5435 1.000385 CAAATTTCGCAGCCTGTTGGA 60.000 47.619 0.00 0.00 34.57 3.53
3127 5436 1.421382 CAAATTTCGCAGCCTGTTGG 58.579 50.000 0.00 0.00 0.00 3.77
3128 5437 0.785979 GCAAATTTCGCAGCCTGTTG 59.214 50.000 0.00 0.00 0.00 3.33
3129 5438 0.664166 CGCAAATTTCGCAGCCTGTT 60.664 50.000 11.42 0.00 0.00 3.16
3130 5439 1.081242 CGCAAATTTCGCAGCCTGT 60.081 52.632 11.42 0.00 0.00 4.00
3131 5440 1.802715 CCGCAAATTTCGCAGCCTG 60.803 57.895 11.42 0.00 0.00 4.85
3132 5441 2.568090 CCGCAAATTTCGCAGCCT 59.432 55.556 11.42 0.00 0.00 4.58
3133 5442 3.181290 GCCGCAAATTTCGCAGCC 61.181 61.111 11.42 0.00 0.00 4.85
3134 5443 3.535491 CGCCGCAAATTTCGCAGC 61.535 61.111 11.42 10.41 0.00 5.25
3135 5444 3.535491 GCGCCGCAAATTTCGCAG 61.535 61.111 14.84 4.79 45.99 5.18
3137 5446 2.848907 GATGCGCCGCAAATTTCGC 61.849 57.895 18.69 13.33 43.62 4.70
3138 5447 2.558412 CGATGCGCCGCAAATTTCG 61.558 57.895 18.69 17.56 43.62 3.46
3139 5448 3.288641 CGATGCGCCGCAAATTTC 58.711 55.556 18.69 8.28 43.62 2.17
3150 5459 1.086067 ATGACACTTCCAGCGATGCG 61.086 55.000 0.00 0.00 0.00 4.73
3151 5460 1.939974 TATGACACTTCCAGCGATGC 58.060 50.000 0.00 0.00 0.00 3.91
3152 5461 3.785486 TCTTATGACACTTCCAGCGATG 58.215 45.455 0.00 0.00 0.00 3.84
3153 5462 3.739519 GCTCTTATGACACTTCCAGCGAT 60.740 47.826 0.00 0.00 0.00 4.58
3154 5463 2.417379 GCTCTTATGACACTTCCAGCGA 60.417 50.000 0.00 0.00 0.00 4.93
3155 5464 1.929836 GCTCTTATGACACTTCCAGCG 59.070 52.381 0.00 0.00 0.00 5.18
3156 5465 2.977914 TGCTCTTATGACACTTCCAGC 58.022 47.619 0.00 0.00 0.00 4.85
3157 5466 5.021033 AGATGCTCTTATGACACTTCCAG 57.979 43.478 0.00 0.00 0.00 3.86
3158 5467 4.141846 GGAGATGCTCTTATGACACTTCCA 60.142 45.833 0.00 0.00 0.00 3.53
3159 5468 4.141846 TGGAGATGCTCTTATGACACTTCC 60.142 45.833 0.00 0.00 0.00 3.46
3160 5469 5.016051 TGGAGATGCTCTTATGACACTTC 57.984 43.478 0.00 0.00 0.00 3.01
3161 5470 5.181748 GTTGGAGATGCTCTTATGACACTT 58.818 41.667 0.00 0.00 0.00 3.16
3162 5471 4.223700 TGTTGGAGATGCTCTTATGACACT 59.776 41.667 0.00 0.00 0.00 3.55
3163 5472 4.507710 TGTTGGAGATGCTCTTATGACAC 58.492 43.478 0.00 0.00 0.00 3.67
3164 5473 4.383444 CCTGTTGGAGATGCTCTTATGACA 60.383 45.833 0.00 0.00 34.57 3.58
3165 5474 4.125703 CCTGTTGGAGATGCTCTTATGAC 58.874 47.826 0.00 0.00 34.57 3.06
3166 5475 3.432749 GCCTGTTGGAGATGCTCTTATGA 60.433 47.826 0.00 0.00 34.57 2.15
3167 5476 2.877168 GCCTGTTGGAGATGCTCTTATG 59.123 50.000 0.00 0.00 34.57 1.90
3168 5477 2.776536 AGCCTGTTGGAGATGCTCTTAT 59.223 45.455 0.00 0.00 34.57 1.73
3169 5478 2.093288 CAGCCTGTTGGAGATGCTCTTA 60.093 50.000 0.00 0.00 34.57 2.10
3170 5479 0.990374 AGCCTGTTGGAGATGCTCTT 59.010 50.000 0.00 0.00 34.57 2.85
3171 5480 0.252479 CAGCCTGTTGGAGATGCTCT 59.748 55.000 0.00 0.00 34.57 4.09
3172 5481 1.375098 GCAGCCTGTTGGAGATGCTC 61.375 60.000 0.00 0.00 36.52 4.26
3173 5482 1.378250 GCAGCCTGTTGGAGATGCT 60.378 57.895 0.00 0.00 36.52 3.79
3174 5483 2.758089 CGCAGCCTGTTGGAGATGC 61.758 63.158 0.00 0.00 36.28 3.91
3175 5484 0.674581 TTCGCAGCCTGTTGGAGATG 60.675 55.000 0.00 0.00 34.57 2.90
3176 5485 0.036732 TTTCGCAGCCTGTTGGAGAT 59.963 50.000 0.00 0.00 34.57 2.75
3177 5486 0.036732 ATTTCGCAGCCTGTTGGAGA 59.963 50.000 0.00 0.00 34.57 3.71
3178 5487 0.883833 AATTTCGCAGCCTGTTGGAG 59.116 50.000 0.00 0.00 34.57 3.86
3179 5488 1.000385 CAAATTTCGCAGCCTGTTGGA 60.000 47.619 0.00 0.00 34.57 3.53
3180 5489 1.421382 CAAATTTCGCAGCCTGTTGG 58.579 50.000 0.00 0.00 0.00 3.77
3181 5490 0.785979 GCAAATTTCGCAGCCTGTTG 59.214 50.000 0.00 0.00 0.00 3.33
3182 5491 0.664166 CGCAAATTTCGCAGCCTGTT 60.664 50.000 11.42 0.00 0.00 3.16
3183 5492 1.081242 CGCAAATTTCGCAGCCTGT 60.081 52.632 11.42 0.00 0.00 4.00
3184 5493 1.802715 CCGCAAATTTCGCAGCCTG 60.803 57.895 11.42 0.00 0.00 4.85
3185 5494 2.568090 CCGCAAATTTCGCAGCCT 59.432 55.556 11.42 0.00 0.00 4.58
3186 5495 3.181290 GCCGCAAATTTCGCAGCC 61.181 61.111 11.42 0.00 0.00 4.85
3187 5496 3.535491 CGCCGCAAATTTCGCAGC 61.535 61.111 11.42 10.41 0.00 5.25
3188 5497 3.535491 GCGCCGCAAATTTCGCAG 61.535 61.111 14.84 4.79 45.99 5.18
3190 5499 2.848907 GATGCGCCGCAAATTTCGC 61.849 57.895 18.69 13.33 43.62 4.70
3191 5500 2.558412 CGATGCGCCGCAAATTTCG 61.558 57.895 18.69 17.56 43.62 3.46
3192 5501 3.288641 CGATGCGCCGCAAATTTC 58.711 55.556 18.69 8.28 43.62 2.17
3203 5512 1.086067 ATGACACTTCCAGCGATGCG 61.086 55.000 0.00 0.00 0.00 4.73
3204 5513 1.939974 TATGACACTTCCAGCGATGC 58.060 50.000 0.00 0.00 0.00 3.91
3205 5514 3.785486 TCTTATGACACTTCCAGCGATG 58.215 45.455 0.00 0.00 0.00 3.84
3206 5515 3.739519 GCTCTTATGACACTTCCAGCGAT 60.740 47.826 0.00 0.00 0.00 4.58
3207 5516 2.417379 GCTCTTATGACACTTCCAGCGA 60.417 50.000 0.00 0.00 0.00 4.93
3208 5517 1.929836 GCTCTTATGACACTTCCAGCG 59.070 52.381 0.00 0.00 0.00 5.18
3209 5518 2.977914 TGCTCTTATGACACTTCCAGC 58.022 47.619 0.00 0.00 0.00 4.85
3210 5519 5.021033 AGATGCTCTTATGACACTTCCAG 57.979 43.478 0.00 0.00 0.00 3.86
3211 5520 4.141846 GGAGATGCTCTTATGACACTTCCA 60.142 45.833 0.00 0.00 0.00 3.53
3212 5521 4.141846 TGGAGATGCTCTTATGACACTTCC 60.142 45.833 0.00 0.00 0.00 3.46
3213 5522 5.016051 TGGAGATGCTCTTATGACACTTC 57.984 43.478 0.00 0.00 0.00 3.01
3214 5523 5.181748 GTTGGAGATGCTCTTATGACACTT 58.818 41.667 0.00 0.00 0.00 3.16
3215 5524 4.223700 TGTTGGAGATGCTCTTATGACACT 59.776 41.667 0.00 0.00 0.00 3.55
3216 5525 4.507710 TGTTGGAGATGCTCTTATGACAC 58.492 43.478 0.00 0.00 0.00 3.67
3217 5526 4.383444 CCTGTTGGAGATGCTCTTATGACA 60.383 45.833 0.00 0.00 34.57 3.58
3218 5527 4.125703 CCTGTTGGAGATGCTCTTATGAC 58.874 47.826 0.00 0.00 34.57 3.06
3219 5528 3.432749 GCCTGTTGGAGATGCTCTTATGA 60.433 47.826 0.00 0.00 34.57 2.15
3220 5529 2.877168 GCCTGTTGGAGATGCTCTTATG 59.123 50.000 0.00 0.00 34.57 1.90
3221 5530 2.776536 AGCCTGTTGGAGATGCTCTTAT 59.223 45.455 0.00 0.00 34.57 1.73
3222 5531 2.093288 CAGCCTGTTGGAGATGCTCTTA 60.093 50.000 0.00 0.00 34.57 2.10
3223 5532 0.990374 AGCCTGTTGGAGATGCTCTT 59.010 50.000 0.00 0.00 34.57 2.85
3224 5533 0.252479 CAGCCTGTTGGAGATGCTCT 59.748 55.000 0.00 0.00 34.57 4.09
3225 5534 1.375098 GCAGCCTGTTGGAGATGCTC 61.375 60.000 0.00 0.00 36.52 4.26
3226 5535 1.378250 GCAGCCTGTTGGAGATGCT 60.378 57.895 0.00 0.00 36.52 3.79
3227 5536 2.758089 CGCAGCCTGTTGGAGATGC 61.758 63.158 0.00 0.00 36.28 3.91
3228 5537 0.674581 TTCGCAGCCTGTTGGAGATG 60.675 55.000 0.00 0.00 34.57 2.90
3229 5538 0.036732 TTTCGCAGCCTGTTGGAGAT 59.963 50.000 0.00 0.00 34.57 2.75
3230 5539 0.036732 ATTTCGCAGCCTGTTGGAGA 59.963 50.000 0.00 0.00 34.57 3.71
3231 5540 0.883833 AATTTCGCAGCCTGTTGGAG 59.116 50.000 0.00 0.00 34.57 3.86
3232 5541 1.000385 CAAATTTCGCAGCCTGTTGGA 60.000 47.619 0.00 0.00 34.57 3.53
3233 5542 1.421382 CAAATTTCGCAGCCTGTTGG 58.579 50.000 0.00 0.00 0.00 3.77
3234 5543 0.785979 GCAAATTTCGCAGCCTGTTG 59.214 50.000 0.00 0.00 0.00 3.33
3235 5544 0.664166 CGCAAATTTCGCAGCCTGTT 60.664 50.000 11.42 0.00 0.00 3.16
3236 5545 1.081242 CGCAAATTTCGCAGCCTGT 60.081 52.632 11.42 0.00 0.00 4.00
3237 5546 1.802715 CCGCAAATTTCGCAGCCTG 60.803 57.895 11.42 0.00 0.00 4.85
3238 5547 2.568090 CCGCAAATTTCGCAGCCT 59.432 55.556 11.42 0.00 0.00 4.58
3239 5548 3.181290 GCCGCAAATTTCGCAGCC 61.181 61.111 11.42 0.00 0.00 4.85
3240 5549 3.535491 CGCCGCAAATTTCGCAGC 61.535 61.111 11.42 10.41 0.00 5.25
3241 5550 3.535491 GCGCCGCAAATTTCGCAG 61.535 61.111 14.84 4.79 45.99 5.18
3243 5552 2.848907 GATGCGCCGCAAATTTCGC 61.849 57.895 18.69 13.33 43.62 4.70
3244 5553 2.558412 CGATGCGCCGCAAATTTCG 61.558 57.895 18.69 17.56 43.62 3.46
3245 5554 3.288641 CGATGCGCCGCAAATTTC 58.711 55.556 18.69 8.28 43.62 2.17
3256 5565 1.086067 ATGACACTTCCAGCGATGCG 61.086 55.000 0.00 0.00 0.00 4.73
3257 5566 1.939974 TATGACACTTCCAGCGATGC 58.060 50.000 0.00 0.00 0.00 3.91
3258 5567 3.785486 TCTTATGACACTTCCAGCGATG 58.215 45.455 0.00 0.00 0.00 3.84
3259 5568 3.739519 GCTCTTATGACACTTCCAGCGAT 60.740 47.826 0.00 0.00 0.00 4.58
3260 5569 2.417379 GCTCTTATGACACTTCCAGCGA 60.417 50.000 0.00 0.00 0.00 4.93
3261 5570 1.929836 GCTCTTATGACACTTCCAGCG 59.070 52.381 0.00 0.00 0.00 5.18
3262 5571 2.977914 TGCTCTTATGACACTTCCAGC 58.022 47.619 0.00 0.00 0.00 4.85
3263 5572 5.021033 AGATGCTCTTATGACACTTCCAG 57.979 43.478 0.00 0.00 0.00 3.86
3264 5573 4.141846 GGAGATGCTCTTATGACACTTCCA 60.142 45.833 0.00 0.00 0.00 3.53
3265 5574 4.141846 TGGAGATGCTCTTATGACACTTCC 60.142 45.833 0.00 0.00 0.00 3.46
3266 5575 5.016051 TGGAGATGCTCTTATGACACTTC 57.984 43.478 0.00 0.00 0.00 3.01
3267 5576 5.181748 GTTGGAGATGCTCTTATGACACTT 58.818 41.667 0.00 0.00 0.00 3.16
3268 5577 4.223700 TGTTGGAGATGCTCTTATGACACT 59.776 41.667 0.00 0.00 0.00 3.55
3269 5578 4.507710 TGTTGGAGATGCTCTTATGACAC 58.492 43.478 0.00 0.00 0.00 3.67
3270 5579 4.383444 CCTGTTGGAGATGCTCTTATGACA 60.383 45.833 0.00 0.00 34.57 3.58
3271 5580 4.125703 CCTGTTGGAGATGCTCTTATGAC 58.874 47.826 0.00 0.00 34.57 3.06
3272 5581 3.432749 GCCTGTTGGAGATGCTCTTATGA 60.433 47.826 0.00 0.00 34.57 2.15
3273 5582 2.877168 GCCTGTTGGAGATGCTCTTATG 59.123 50.000 0.00 0.00 34.57 1.90
3274 5583 2.776536 AGCCTGTTGGAGATGCTCTTAT 59.223 45.455 0.00 0.00 34.57 1.73
3275 5584 2.093288 CAGCCTGTTGGAGATGCTCTTA 60.093 50.000 0.00 0.00 34.57 2.10
3276 5585 0.990374 AGCCTGTTGGAGATGCTCTT 59.010 50.000 0.00 0.00 34.57 2.85
3277 5586 0.252479 CAGCCTGTTGGAGATGCTCT 59.748 55.000 0.00 0.00 34.57 4.09
3278 5587 1.375098 GCAGCCTGTTGGAGATGCTC 61.375 60.000 0.00 0.00 36.52 4.26
3279 5588 1.378250 GCAGCCTGTTGGAGATGCT 60.378 57.895 0.00 0.00 36.52 3.79
3280 5589 2.758089 CGCAGCCTGTTGGAGATGC 61.758 63.158 0.00 0.00 36.28 3.91
3281 5590 1.078918 TCGCAGCCTGTTGGAGATG 60.079 57.895 0.00 0.00 34.57 2.90
3282 5591 1.220206 CTCGCAGCCTGTTGGAGAT 59.780 57.895 0.00 0.00 34.57 2.75
3283 5592 1.881903 CTCTCGCAGCCTGTTGGAGA 61.882 60.000 10.40 10.40 34.57 3.71
3284 5593 1.447489 CTCTCGCAGCCTGTTGGAG 60.447 63.158 0.00 0.00 34.57 3.86
3285 5594 2.659016 CTCTCGCAGCCTGTTGGA 59.341 61.111 0.00 0.00 34.57 3.53
3286 5595 2.435586 CCTCTCGCAGCCTGTTGG 60.436 66.667 0.00 0.00 0.00 3.77
3287 5596 3.123620 GCCTCTCGCAGCCTGTTG 61.124 66.667 0.00 0.00 37.47 3.33
3288 5597 4.400961 GGCCTCTCGCAGCCTGTT 62.401 66.667 0.00 0.00 46.14 3.16
3298 5607 1.426041 TTTATTTCGCGCGGCCTCTC 61.426 55.000 31.69 0.00 0.00 3.20
3299 5608 0.814010 ATTTATTTCGCGCGGCCTCT 60.814 50.000 31.69 12.84 0.00 3.69
3300 5609 0.028902 AATTTATTTCGCGCGGCCTC 59.971 50.000 31.69 0.00 0.00 4.70
3301 5610 0.454196 AAATTTATTTCGCGCGGCCT 59.546 45.000 31.69 16.56 0.00 5.19
3302 5611 0.570272 CAAATTTATTTCGCGCGGCC 59.430 50.000 31.69 0.00 0.00 6.13
3303 5612 0.570272 CCAAATTTATTTCGCGCGGC 59.430 50.000 31.69 0.00 0.00 6.53
3304 5613 0.570272 GCCAAATTTATTTCGCGCGG 59.430 50.000 31.69 11.75 0.00 6.46
3305 5614 0.570272 GGCCAAATTTATTTCGCGCG 59.430 50.000 26.76 26.76 35.20 6.86
3306 5615 0.927537 GGGCCAAATTTATTTCGCGC 59.072 50.000 4.39 0.00 38.92 6.86
3307 5616 1.136110 AGGGGCCAAATTTATTTCGCG 59.864 47.619 4.39 0.00 35.20 5.87
3308 5617 2.798145 CGAGGGGCCAAATTTATTTCGC 60.798 50.000 4.39 0.00 33.90 4.70
3309 5618 2.798145 GCGAGGGGCCAAATTTATTTCG 60.798 50.000 4.39 1.02 34.80 3.46
3310 5619 2.798145 CGCGAGGGGCCAAATTTATTTC 60.798 50.000 4.39 0.00 38.94 2.17
3311 5620 1.136110 CGCGAGGGGCCAAATTTATTT 59.864 47.619 4.39 0.00 38.94 1.40
3312 5621 0.744281 CGCGAGGGGCCAAATTTATT 59.256 50.000 4.39 0.00 38.94 1.40
3313 5622 1.734388 GCGCGAGGGGCCAAATTTAT 61.734 55.000 12.10 0.00 38.94 1.40
3314 5623 2.411504 GCGCGAGGGGCCAAATTTA 61.412 57.895 12.10 0.00 38.94 1.40
3315 5624 3.758931 GCGCGAGGGGCCAAATTT 61.759 61.111 12.10 0.00 38.94 1.82
3325 5634 3.804193 GCTTTTCCCTGCGCGAGG 61.804 66.667 12.10 14.11 42.38 4.63
3331 5640 4.426112 GCTGCCGCTTTTCCCTGC 62.426 66.667 0.00 0.00 0.00 4.85
3332 5641 4.107051 CGCTGCCGCTTTTCCCTG 62.107 66.667 0.00 0.00 0.00 4.45
3344 5653 4.084888 AAAACTACCGCGCGCTGC 62.085 61.111 30.48 10.17 41.47 5.25
3345 5654 2.202171 CAAAACTACCGCGCGCTG 60.202 61.111 30.48 25.90 0.00 5.18
3346 5655 4.084888 GCAAAACTACCGCGCGCT 62.085 61.111 30.48 14.92 0.00 5.92
3348 5657 4.787299 CGGCAAAACTACCGCGCG 62.787 66.667 25.67 25.67 43.44 6.86
3353 5662 2.746803 ATCGCGCGGCAAAACTACC 61.747 57.895 31.69 0.00 0.00 3.18
3354 5663 1.580132 CATCGCGCGGCAAAACTAC 60.580 57.895 31.69 0.00 0.00 2.73
3355 5664 2.781957 CATCGCGCGGCAAAACTA 59.218 55.556 31.69 8.20 0.00 2.24
3356 5665 4.759096 GCATCGCGCGGCAAAACT 62.759 61.111 31.69 3.10 0.00 2.66
3372 5681 4.524318 TAACCCAGCGCGCTAGGC 62.524 66.667 39.59 9.14 38.69 3.93
3373 5682 1.022451 TTTTAACCCAGCGCGCTAGG 61.022 55.000 38.38 38.38 0.00 3.02
3374 5683 0.373716 CTTTTAACCCAGCGCGCTAG 59.626 55.000 36.02 29.12 0.00 3.42
3375 5684 1.641123 GCTTTTAACCCAGCGCGCTA 61.641 55.000 36.02 16.07 0.00 4.26
3376 5685 2.978018 GCTTTTAACCCAGCGCGCT 61.978 57.895 31.32 31.32 0.00 5.92
3377 5686 2.504026 GCTTTTAACCCAGCGCGC 60.504 61.111 26.66 26.66 0.00 6.86
3378 5687 1.001745 GTTGCTTTTAACCCAGCGCG 61.002 55.000 0.00 0.00 39.04 6.86
3379 5688 1.001745 CGTTGCTTTTAACCCAGCGC 61.002 55.000 0.00 0.00 39.04 5.92
3380 5689 1.001745 GCGTTGCTTTTAACCCAGCG 61.002 55.000 0.00 0.00 39.04 5.18
3381 5690 1.001745 CGCGTTGCTTTTAACCCAGC 61.002 55.000 0.00 0.00 36.49 4.85
3382 5691 1.001745 GCGCGTTGCTTTTAACCCAG 61.002 55.000 8.43 0.00 41.73 4.45
3383 5692 1.008309 GCGCGTTGCTTTTAACCCA 60.008 52.632 8.43 0.00 41.73 4.51
3384 5693 1.731613 GGCGCGTTGCTTTTAACCC 60.732 57.895 8.43 0.00 45.43 4.11
3385 5694 1.001745 CAGGCGCGTTGCTTTTAACC 61.002 55.000 8.43 0.00 45.43 2.85
3386 5695 1.605481 GCAGGCGCGTTGCTTTTAAC 61.605 55.000 24.06 0.00 45.43 2.01
3387 5696 1.371145 GCAGGCGCGTTGCTTTTAA 60.371 52.632 24.06 0.00 45.43 1.52
3388 5697 2.254051 GCAGGCGCGTTGCTTTTA 59.746 55.556 24.06 0.00 45.43 1.52
3389 5698 3.898509 TGCAGGCGCGTTGCTTTT 61.899 55.556 28.61 0.00 45.43 2.27
3390 5699 4.629115 GTGCAGGCGCGTTGCTTT 62.629 61.111 28.61 0.76 45.43 3.51
3409 5718 2.458006 GAAGTTTCTGGCGGTTGGCG 62.458 60.000 0.00 0.00 44.92 5.69
3410 5719 1.285950 GAAGTTTCTGGCGGTTGGC 59.714 57.895 0.00 0.00 42.51 4.52
3411 5720 0.310854 GTGAAGTTTCTGGCGGTTGG 59.689 55.000 0.00 0.00 0.00 3.77
3412 5721 1.264288 GAGTGAAGTTTCTGGCGGTTG 59.736 52.381 0.00 0.00 0.00 3.77
3413 5722 1.594331 GAGTGAAGTTTCTGGCGGTT 58.406 50.000 0.00 0.00 0.00 4.44
3414 5723 0.250338 GGAGTGAAGTTTCTGGCGGT 60.250 55.000 0.00 0.00 0.00 5.68
3415 5724 0.955919 GGGAGTGAAGTTTCTGGCGG 60.956 60.000 0.00 0.00 0.00 6.13
3416 5725 1.291877 CGGGAGTGAAGTTTCTGGCG 61.292 60.000 0.00 0.00 0.00 5.69
3417 5726 0.250338 ACGGGAGTGAAGTTTCTGGC 60.250 55.000 0.00 0.00 44.82 4.85
3438 5747 2.048127 AAGAGAAGGCGTGGCGAC 60.048 61.111 0.00 0.00 33.59 5.19
3439 5748 2.261671 GAAGAGAAGGCGTGGCGA 59.738 61.111 0.00 0.00 0.00 5.54
3440 5749 2.815647 GGAAGAGAAGGCGTGGCG 60.816 66.667 0.00 0.00 0.00 5.69
3441 5750 2.436824 GGGAAGAGAAGGCGTGGC 60.437 66.667 0.00 0.00 0.00 5.01
3442 5751 2.125512 CGGGAAGAGAAGGCGTGG 60.126 66.667 0.00 0.00 0.00 4.94
3443 5752 2.815647 GCGGGAAGAGAAGGCGTG 60.816 66.667 0.00 0.00 0.00 5.34
3444 5753 4.083862 GGCGGGAAGAGAAGGCGT 62.084 66.667 0.00 0.00 0.00 5.68
3445 5754 3.724914 GAGGCGGGAAGAGAAGGCG 62.725 68.421 0.00 0.00 0.00 5.52
3446 5755 1.904990 AAGAGGCGGGAAGAGAAGGC 61.905 60.000 0.00 0.00 0.00 4.35
3447 5756 0.615850 AAAGAGGCGGGAAGAGAAGG 59.384 55.000 0.00 0.00 0.00 3.46
3448 5757 1.276421 TGAAAGAGGCGGGAAGAGAAG 59.724 52.381 0.00 0.00 0.00 2.85
3449 5758 1.276421 CTGAAAGAGGCGGGAAGAGAA 59.724 52.381 0.00 0.00 34.07 2.87
3450 5759 0.898320 CTGAAAGAGGCGGGAAGAGA 59.102 55.000 0.00 0.00 34.07 3.10
3451 5760 0.610687 ACTGAAAGAGGCGGGAAGAG 59.389 55.000 0.00 0.00 37.43 2.85
3452 5761 0.321671 CACTGAAAGAGGCGGGAAGA 59.678 55.000 0.00 0.00 37.43 2.87
3453 5762 1.301677 GCACTGAAAGAGGCGGGAAG 61.302 60.000 0.00 0.00 37.43 3.46
3454 5763 1.302511 GCACTGAAAGAGGCGGGAA 60.303 57.895 0.00 0.00 37.43 3.97
3455 5764 2.172483 GAGCACTGAAAGAGGCGGGA 62.172 60.000 0.00 0.00 41.34 5.14
3456 5765 1.743252 GAGCACTGAAAGAGGCGGG 60.743 63.158 0.00 0.00 41.34 6.13
3457 5766 1.743252 GGAGCACTGAAAGAGGCGG 60.743 63.158 0.00 0.00 41.34 6.13
3458 5767 2.097038 CGGAGCACTGAAAGAGGCG 61.097 63.158 0.00 0.00 41.34 5.52
3459 5768 3.882025 CGGAGCACTGAAAGAGGC 58.118 61.111 0.00 0.00 37.43 4.70
3476 5785 3.056313 GAGAAGGCACGGCAATGGC 62.056 63.158 4.98 4.98 45.26 4.40
3477 5786 0.962356 AAGAGAAGGCACGGCAATGG 60.962 55.000 0.00 0.00 0.00 3.16
3478 5787 0.449388 GAAGAGAAGGCACGGCAATG 59.551 55.000 0.00 0.00 0.00 2.82
3479 5788 0.678048 GGAAGAGAAGGCACGGCAAT 60.678 55.000 0.00 0.00 0.00 3.56
3480 5789 1.302511 GGAAGAGAAGGCACGGCAA 60.303 57.895 0.00 0.00 0.00 4.52
3481 5790 2.347490 GGAAGAGAAGGCACGGCA 59.653 61.111 0.00 0.00 0.00 5.69
3482 5791 2.436824 GGGAAGAGAAGGCACGGC 60.437 66.667 0.00 0.00 0.00 5.68
3483 5792 2.125512 CGGGAAGAGAAGGCACGG 60.126 66.667 0.00 0.00 0.00 4.94
3484 5793 2.815647 GCGGGAAGAGAAGGCACG 60.816 66.667 0.00 0.00 0.00 5.34
3485 5794 2.436824 GGCGGGAAGAGAAGGCAC 60.437 66.667 0.00 0.00 0.00 5.01
3486 5795 2.607750 AGGCGGGAAGAGAAGGCA 60.608 61.111 0.00 0.00 0.00 4.75
3487 5796 1.904990 AAGAGGCGGGAAGAGAAGGC 61.905 60.000 0.00 0.00 0.00 4.35
3488 5797 0.615850 AAAGAGGCGGGAAGAGAAGG 59.384 55.000 0.00 0.00 0.00 3.46
3489 5798 1.276421 TGAAAGAGGCGGGAAGAGAAG 59.724 52.381 0.00 0.00 0.00 2.85
3490 5799 1.276421 CTGAAAGAGGCGGGAAGAGAA 59.724 52.381 0.00 0.00 34.07 2.87
3491 5800 0.898320 CTGAAAGAGGCGGGAAGAGA 59.102 55.000 0.00 0.00 34.07 3.10
3492 5801 0.610687 ACTGAAAGAGGCGGGAAGAG 59.389 55.000 0.00 0.00 37.43 2.85
3493 5802 0.321671 CACTGAAAGAGGCGGGAAGA 59.678 55.000 0.00 0.00 37.43 2.87
3494 5803 1.301677 GCACTGAAAGAGGCGGGAAG 61.302 60.000 0.00 0.00 37.43 3.46
3495 5804 1.302511 GCACTGAAAGAGGCGGGAA 60.303 57.895 0.00 0.00 37.43 3.97
3496 5805 2.172483 GAGCACTGAAAGAGGCGGGA 62.172 60.000 0.00 0.00 41.34 5.14
3497 5806 1.743252 GAGCACTGAAAGAGGCGGG 60.743 63.158 0.00 0.00 41.34 6.13
3498 5807 1.018226 CAGAGCACTGAAAGAGGCGG 61.018 60.000 5.03 0.00 46.03 6.13
3499 5808 1.633852 GCAGAGCACTGAAAGAGGCG 61.634 60.000 15.88 0.00 46.03 5.52
3500 5809 1.304509 GGCAGAGCACTGAAAGAGGC 61.305 60.000 15.88 0.00 46.03 4.70
3501 5810 0.035881 TGGCAGAGCACTGAAAGAGG 59.964 55.000 15.88 0.00 46.03 3.69
3502 5811 1.155042 GTGGCAGAGCACTGAAAGAG 58.845 55.000 15.88 0.00 46.03 2.85
3503 5812 0.250467 GGTGGCAGAGCACTGAAAGA 60.250 55.000 15.88 0.00 46.03 2.52
3504 5813 1.572085 CGGTGGCAGAGCACTGAAAG 61.572 60.000 15.88 0.00 46.03 2.62
3505 5814 1.597854 CGGTGGCAGAGCACTGAAA 60.598 57.895 15.88 0.00 46.03 2.69
3506 5815 2.031012 CGGTGGCAGAGCACTGAA 59.969 61.111 15.88 0.00 46.03 3.02
3507 5816 4.687215 GCGGTGGCAGAGCACTGA 62.687 66.667 15.88 0.00 46.03 3.41
3522 5831 3.368455 GAAGAAAGAAGGCGCGGCG 62.368 63.158 27.74 19.62 0.00 6.46
3523 5832 2.481009 GAAGAAAGAAGGCGCGGC 59.519 61.111 27.06 27.06 0.00 6.53
3524 5833 2.778679 CGAAGAAAGAAGGCGCGG 59.221 61.111 8.83 0.00 0.00 6.46
3525 5834 2.096594 GCGAAGAAAGAAGGCGCG 59.903 61.111 0.00 0.00 38.24 6.86
3526 5835 1.972027 GAGGCGAAGAAAGAAGGCGC 61.972 60.000 0.00 0.00 46.20 6.53
3527 5836 0.390472 AGAGGCGAAGAAAGAAGGCG 60.390 55.000 0.00 0.00 0.00 5.52
3528 5837 1.735018 GAAGAGGCGAAGAAAGAAGGC 59.265 52.381 0.00 0.00 0.00 4.35
3529 5838 2.289694 TGGAAGAGGCGAAGAAAGAAGG 60.290 50.000 0.00 0.00 0.00 3.46
3530 5839 2.999355 CTGGAAGAGGCGAAGAAAGAAG 59.001 50.000 0.00 0.00 34.07 2.85
3531 5840 2.872038 GCTGGAAGAGGCGAAGAAAGAA 60.872 50.000 0.00 0.00 34.07 2.52
3532 5841 1.338200 GCTGGAAGAGGCGAAGAAAGA 60.338 52.381 0.00 0.00 34.07 2.52
3533 5842 1.082690 GCTGGAAGAGGCGAAGAAAG 58.917 55.000 0.00 0.00 34.07 2.62
3534 5843 0.687354 AGCTGGAAGAGGCGAAGAAA 59.313 50.000 0.00 0.00 34.07 2.52
3535 5844 0.247736 GAGCTGGAAGAGGCGAAGAA 59.752 55.000 0.00 0.00 34.07 2.52
3536 5845 1.608717 GGAGCTGGAAGAGGCGAAGA 61.609 60.000 0.00 0.00 34.07 2.87
3537 5846 1.153469 GGAGCTGGAAGAGGCGAAG 60.153 63.158 0.00 0.00 34.07 3.79
3538 5847 2.660064 GGGAGCTGGAAGAGGCGAA 61.660 63.158 0.00 0.00 34.07 4.70
3539 5848 3.077556 GGGAGCTGGAAGAGGCGA 61.078 66.667 0.00 0.00 34.07 5.54
3540 5849 4.168291 GGGGAGCTGGAAGAGGCG 62.168 72.222 0.00 0.00 34.07 5.52
3541 5850 4.168291 CGGGGAGCTGGAAGAGGC 62.168 72.222 0.00 0.00 34.07 4.70
3542 5851 4.168291 GCGGGGAGCTGGAAGAGG 62.168 72.222 0.00 0.00 44.04 3.69
3568 5877 4.814294 CCGACGGGGAAGAAGGCG 62.814 72.222 5.81 0.00 38.47 5.52
3569 5878 3.249837 AACCGACGGGGAAGAAGGC 62.250 63.158 20.00 0.00 39.97 4.35
3570 5879 1.079336 GAACCGACGGGGAAGAAGG 60.079 63.158 20.00 0.00 39.97 3.46
3571 5880 1.079336 GGAACCGACGGGGAAGAAG 60.079 63.158 20.00 0.00 39.97 2.85
3572 5881 1.409251 TTGGAACCGACGGGGAAGAA 61.409 55.000 20.00 1.15 39.97 2.52
3573 5882 1.837947 TTGGAACCGACGGGGAAGA 60.838 57.895 20.00 0.00 39.97 2.87
3574 5883 1.670083 GTTGGAACCGACGGGGAAG 60.670 63.158 20.00 0.00 39.97 3.46
3575 5884 2.426887 GTTGGAACCGACGGGGAA 59.573 61.111 20.00 1.90 39.97 3.97
3576 5885 2.843411 TGTTGGAACCGACGGGGA 60.843 61.111 20.00 0.00 39.97 4.81
3577 5886 2.667199 GTGTTGGAACCGACGGGG 60.667 66.667 20.00 0.00 43.62 5.73
3578 5887 2.667199 GGTGTTGGAACCGACGGG 60.667 66.667 20.00 0.00 40.11 5.28
3579 5888 2.667199 GGGTGTTGGAACCGACGG 60.667 66.667 13.61 13.61 41.52 4.79
3580 5889 2.667199 GGGGTGTTGGAACCGACG 60.667 66.667 6.72 0.00 41.52 5.12
3581 5890 2.281970 GGGGGTGTTGGAACCGAC 60.282 66.667 4.40 4.40 41.52 4.79
3585 5894 4.589675 TGGCGGGGGTGTTGGAAC 62.590 66.667 0.00 0.00 0.00 3.62
3586 5895 4.589675 GTGGCGGGGGTGTTGGAA 62.590 66.667 0.00 0.00 0.00 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.