Multiple sequence alignment - TraesCS1A01G206900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G206900 chr1A 100.000 5736 0 0 905 6640 369048987 369054722 0.000000e+00 10593.0
1 TraesCS1A01G206900 chr1A 100.000 709 0 0 1 709 369048083 369048791 0.000000e+00 1310.0
2 TraesCS1A01G206900 chr1A 85.024 207 20 7 3461 3660 369051314 369051516 4.240000e-47 200.0
3 TraesCS1A01G206900 chr1A 85.024 207 20 7 3232 3434 369051543 369051742 4.240000e-47 200.0
4 TraesCS1A01G206900 chr1A 84.043 94 15 0 3549 3642 235358872 235358965 2.660000e-14 91.6
5 TraesCS1A01G206900 chr1A 100.000 41 0 0 6885 6925 369054967 369055007 7.450000e-10 76.8
6 TraesCS1A01G206900 chr1A 100.000 30 0 0 588 617 369048625 369048654 1.000000e-03 56.5
7 TraesCS1A01G206900 chr1A 100.000 30 0 0 543 572 369048670 369048699 1.000000e-03 56.5
8 TraesCS1A01G206900 chr1D 95.187 4654 168 28 1603 6226 296273896 296278523 0.000000e+00 7302.0
9 TraesCS1A01G206900 chr1D 94.525 621 15 5 911 1512 296273228 296273848 0.000000e+00 941.0
10 TraesCS1A01G206900 chr1D 88.432 389 34 9 98 481 296272587 296272969 6.330000e-125 459.0
11 TraesCS1A01G206900 chr1D 85.437 206 21 5 3461 3660 296275521 296275723 9.100000e-49 206.0
12 TraesCS1A01G206900 chr1D 85.437 206 21 4 3232 3434 296275750 296275949 9.100000e-49 206.0
13 TraesCS1A01G206900 chr1B 95.174 4414 151 22 919 5306 397791921 397796298 0.000000e+00 6914.0
14 TraesCS1A01G206900 chr1B 91.232 479 35 3 5847 6320 397797005 397797481 0.000000e+00 645.0
15 TraesCS1A01G206900 chr1B 83.234 501 51 20 1 481 397791167 397791654 4.960000e-116 429.0
16 TraesCS1A01G206900 chr1B 80.600 500 68 18 5308 5805 397796440 397796912 6.600000e-95 359.0
17 TraesCS1A01G206900 chr1B 88.000 200 21 3 3461 3660 397794235 397794431 4.180000e-57 233.0
18 TraesCS1A01G206900 chr1B 90.833 120 11 0 5566 5685 211335057 211335176 2.000000e-35 161.0
19 TraesCS1A01G206900 chr1B 96.591 88 2 1 568 654 397791806 397791893 2.010000e-30 145.0
20 TraesCS1A01G206900 chr1B 85.227 88 11 1 3557 3642 230715955 230715868 9.570000e-14 89.8
21 TraesCS1A01G206900 chr1B 100.000 30 0 0 543 572 397791826 397791855 1.000000e-03 56.5
22 TraesCS1A01G206900 chr5A 88.060 268 25 5 5470 5733 689259436 689259700 1.880000e-80 311.0
23 TraesCS1A01G206900 chr5A 84.112 107 15 2 3557 3662 367594130 367594235 1.230000e-17 102.0
24 TraesCS1A01G206900 chr7A 85.922 206 26 1 6336 6541 693037360 693037158 4.210000e-52 217.0
25 TraesCS1A01G206900 chr6D 90.714 140 7 4 5471 5604 95895398 95895259 1.530000e-41 182.0
26 TraesCS1A01G206900 chr6D 86.290 124 13 2 6315 6437 460457961 460458081 1.570000e-26 132.0
27 TraesCS1A01G206900 chr3D 87.023 131 12 3 6311 6439 445344221 445344348 7.240000e-30 143.0
28 TraesCS1A01G206900 chr3D 85.507 138 12 6 6312 6447 14178767 14178636 3.370000e-28 137.0
29 TraesCS1A01G206900 chr3D 88.000 100 12 0 6539 6638 379817618 379817519 1.220000e-22 119.0
30 TraesCS1A01G206900 chr4D 86.508 126 11 4 6315 6438 449818021 449817900 4.360000e-27 134.0
31 TraesCS1A01G206900 chr4D 89.623 106 8 1 6334 6439 73252822 73252720 1.570000e-26 132.0
32 TraesCS1A01G206900 chr3B 88.073 109 11 2 5471 5577 410368455 410368563 2.030000e-25 128.0
33 TraesCS1A01G206900 chr3B 84.921 126 14 3 6315 6439 655440633 655440512 9.430000e-24 122.0
34 TraesCS1A01G206900 chr3B 87.037 108 12 2 5471 5576 341341694 341341587 3.390000e-23 121.0
35 TraesCS1A01G206900 chr3B 79.032 186 30 7 6327 6510 684296123 684295945 1.220000e-22 119.0
36 TraesCS1A01G206900 chr5D 83.465 127 17 2 6315 6440 296998735 296998858 1.580000e-21 115.0
37 TraesCS1A01G206900 chr5D 96.000 50 2 0 5545 5594 378344679 378344728 1.600000e-11 82.4
38 TraesCS1A01G206900 chr5B 86.735 98 13 0 6541 6638 192872635 192872538 7.340000e-20 110.0
39 TraesCS1A01G206900 chr2B 87.368 95 12 0 6544 6638 488861904 488861998 7.340000e-20 110.0
40 TraesCS1A01G206900 chr3A 84.884 86 13 0 3557 3642 143946193 143946108 3.440000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G206900 chr1A 369048083 369055007 6924 False 1784.685714 10593 95.721143 1 6925 7 chr1A.!!$F2 6924
1 TraesCS1A01G206900 chr1D 296272587 296278523 5936 False 1822.800000 7302 89.803600 98 6226 5 chr1D.!!$F1 6128
2 TraesCS1A01G206900 chr1B 397791167 397797481 6314 False 1254.500000 6914 90.690143 1 6320 7 chr1B.!!$F2 6319

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
555 666 0.036294 AGCTAAGAACTTGACGGGCC 60.036 55.0 0.00 0.00 0.00 5.80 F
557 668 0.037605 CTAAGAACTTGACGGGCCGT 60.038 55.0 34.81 34.81 45.10 5.68 F
958 1127 0.106918 TCTGTCACACACCCAAACCC 60.107 55.0 0.00 0.00 0.00 4.11 F
961 1130 0.458260 GTCACACACCCAAACCCAAC 59.542 55.0 0.00 0.00 0.00 3.77 F
1580 1755 0.665835 CCACGCCAGTGCAAAAGTTA 59.334 50.0 0.00 0.00 46.62 2.24 F
3544 3741 0.542333 GGGCTCTCCTACTGTTTCCC 59.458 60.0 0.00 0.00 0.00 3.97 F
3725 3923 0.039978 CCGTTTTGGCATGCAACGTA 60.040 50.0 28.79 7.61 41.35 3.57 F
5021 5221 1.257743 TCAGTGGAGGTCCTCGAAAG 58.742 55.0 12.91 5.29 36.82 2.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2086 2270 0.487772 ACTAGTGAGTGTCCCCCTGT 59.512 55.000 0.00 0.00 33.41 4.00 R
2511 2698 3.006112 AGATCTGTAGAACGAGCCTCA 57.994 47.619 0.00 0.00 0.00 3.86 R
2914 3101 9.832445 GTAGAAACATCAATAGGAACAATAGGA 57.168 33.333 0.00 0.00 0.00 2.94 R
2915 3102 9.838339 AGTAGAAACATCAATAGGAACAATAGG 57.162 33.333 0.00 0.00 0.00 2.57 R
3651 3848 9.174166 ACTGTGTTCGAAATAGGCTAATTTTAT 57.826 29.630 0.00 0.00 0.00 1.40 R
5057 5257 0.030504 TGACAATTGCAAGTGCCACG 59.969 50.000 25.59 3.15 41.18 4.94 R
5085 5285 0.242017 GCCACAAGCTGAATGTCCAC 59.758 55.000 0.00 0.00 38.99 4.02 R
6564 6972 0.033504 GAGCTCCACAACTCCACGAA 59.966 55.000 0.87 0.00 0.00 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 9.823098 TTTGAAATCTGTGAACATTTGTTTTTG 57.177 25.926 0.00 0.00 38.56 2.44
53 54 8.768957 TGAAATCTGTGAACATTTGTTTTTGA 57.231 26.923 0.00 0.00 38.56 2.69
54 55 9.212641 TGAAATCTGTGAACATTTGTTTTTGAA 57.787 25.926 0.00 0.00 38.56 2.69
57 58 7.448588 TCTGTGAACATTTGTTTTTGAATCG 57.551 32.000 0.00 0.00 38.56 3.34
58 59 6.475076 TCTGTGAACATTTGTTTTTGAATCGG 59.525 34.615 0.00 0.00 38.56 4.18
59 60 5.006165 TGTGAACATTTGTTTTTGAATCGGC 59.994 36.000 0.00 0.00 38.56 5.54
60 61 4.208047 TGAACATTTGTTTTTGAATCGGCG 59.792 37.500 0.00 0.00 38.56 6.46
61 62 3.971150 ACATTTGTTTTTGAATCGGCGA 58.029 36.364 13.87 13.87 0.00 5.54
282 326 1.253100 TTTCTGAAACATTCCGGCCC 58.747 50.000 0.00 0.00 0.00 5.80
283 327 0.111446 TTCTGAAACATTCCGGCCCA 59.889 50.000 0.00 0.00 0.00 5.36
344 391 1.028130 TGCATCAGCCGTTGAAACAA 58.972 45.000 0.00 0.00 39.77 2.83
347 394 1.002900 CATCAGCCGTTGAAACAACGT 60.003 47.619 26.76 13.06 41.64 3.99
373 420 0.251341 CCAAGGTGGCCTAAACTGCT 60.251 55.000 3.32 0.00 31.13 4.24
386 434 6.389906 GCCTAAACTGCTGTTTTTACATCAT 58.610 36.000 24.17 2.36 43.13 2.45
387 435 6.528072 GCCTAAACTGCTGTTTTTACATCATC 59.472 38.462 24.17 3.80 43.13 2.92
388 436 6.742718 CCTAAACTGCTGTTTTTACATCATCG 59.257 38.462 24.17 0.00 43.13 3.84
402 450 5.919272 ACATCATCGTAGCATCATTTCTG 57.081 39.130 0.00 0.00 0.00 3.02
414 463 4.328983 GCATCATTTCTGGCACATTTGAAG 59.671 41.667 0.00 0.00 38.20 3.02
434 483 6.761312 TGAAGAAAAACATCATTTCTGGCAT 58.239 32.000 2.59 0.00 44.22 4.40
443 492 6.469410 ACATCATTTCTGGCATGTGAAAATT 58.531 32.000 12.19 0.00 36.06 1.82
450 499 4.705991 TCTGGCATGTGAAAATTGCTCATA 59.294 37.500 0.00 0.00 36.62 2.15
462 511 9.000486 TGAAAATTGCTCATAAAAATGCATCAA 58.000 25.926 0.00 0.00 35.27 2.57
472 521 2.437200 AATGCATCAACCAACCAACG 57.563 45.000 0.00 0.00 0.00 4.10
502 613 7.492352 TTTCTCAACTTTACAGAAAGGTAGC 57.508 36.000 2.75 0.00 40.80 3.58
503 614 5.548406 TCTCAACTTTACAGAAAGGTAGCC 58.452 41.667 2.75 0.00 40.80 3.93
504 615 5.071250 TCTCAACTTTACAGAAAGGTAGCCA 59.929 40.000 2.75 0.00 40.80 4.75
505 616 5.305585 TCAACTTTACAGAAAGGTAGCCAG 58.694 41.667 2.75 0.00 40.80 4.85
506 617 5.071250 TCAACTTTACAGAAAGGTAGCCAGA 59.929 40.000 2.75 0.00 40.80 3.86
507 618 5.763876 ACTTTACAGAAAGGTAGCCAGAT 57.236 39.130 2.75 0.00 45.49 2.90
508 619 6.128138 ACTTTACAGAAAGGTAGCCAGATT 57.872 37.500 2.75 0.00 45.49 2.40
509 620 6.543735 ACTTTACAGAAAGGTAGCCAGATTT 58.456 36.000 2.75 0.00 45.49 2.17
510 621 7.004691 ACTTTACAGAAAGGTAGCCAGATTTT 58.995 34.615 2.75 0.00 45.49 1.82
511 622 7.505923 ACTTTACAGAAAGGTAGCCAGATTTTT 59.494 33.333 2.75 0.00 45.49 1.94
551 662 4.039032 GCTAGCTAGCTAAGAACTTGACG 58.961 47.826 33.71 10.34 45.62 4.35
552 663 3.512033 AGCTAGCTAAGAACTTGACGG 57.488 47.619 17.69 0.00 0.00 4.79
553 664 2.166664 AGCTAGCTAAGAACTTGACGGG 59.833 50.000 17.69 0.00 0.00 5.28
554 665 2.541556 CTAGCTAAGAACTTGACGGGC 58.458 52.381 0.00 0.00 0.00 6.13
555 666 0.036294 AGCTAAGAACTTGACGGGCC 60.036 55.000 0.00 0.00 0.00 5.80
556 667 1.359459 GCTAAGAACTTGACGGGCCG 61.359 60.000 27.06 27.06 0.00 6.13
557 668 0.037605 CTAAGAACTTGACGGGCCGT 60.038 55.000 34.81 34.81 45.10 5.68
558 669 0.393820 TAAGAACTTGACGGGCCGTT 59.606 50.000 34.58 17.58 41.37 4.44
560 671 2.593436 AACTTGACGGGCCGTTGG 60.593 61.111 34.58 25.62 41.37 3.77
562 673 2.742372 CTTGACGGGCCGTTGGAG 60.742 66.667 34.58 24.88 41.37 3.86
564 675 2.521958 CTTGACGGGCCGTTGGAGAT 62.522 60.000 34.58 8.09 41.37 2.75
566 677 4.096003 ACGGGCCGTTGGAGATGG 62.096 66.667 28.83 0.00 36.35 3.51
661 817 3.223589 GCCCCCGCTCTCTCTCTC 61.224 72.222 0.00 0.00 0.00 3.20
662 818 2.600731 CCCCCGCTCTCTCTCTCT 59.399 66.667 0.00 0.00 0.00 3.10
663 819 1.528309 CCCCCGCTCTCTCTCTCTC 60.528 68.421 0.00 0.00 0.00 3.20
664 820 1.531748 CCCCGCTCTCTCTCTCTCT 59.468 63.158 0.00 0.00 0.00 3.10
666 822 0.469917 CCCGCTCTCTCTCTCTCTCT 59.530 60.000 0.00 0.00 0.00 3.10
667 823 1.541233 CCCGCTCTCTCTCTCTCTCTC 60.541 61.905 0.00 0.00 0.00 3.20
668 824 1.138859 CCGCTCTCTCTCTCTCTCTCA 59.861 57.143 0.00 0.00 0.00 3.27
669 825 2.419990 CCGCTCTCTCTCTCTCTCTCAA 60.420 54.545 0.00 0.00 0.00 3.02
670 826 3.270027 CGCTCTCTCTCTCTCTCTCAAA 58.730 50.000 0.00 0.00 0.00 2.69
671 827 3.689161 CGCTCTCTCTCTCTCTCTCAAAA 59.311 47.826 0.00 0.00 0.00 2.44
672 828 4.155826 CGCTCTCTCTCTCTCTCTCAAAAA 59.844 45.833 0.00 0.00 0.00 1.94
696 852 1.545841 AAAAAGCGGGTTCCTCATCC 58.454 50.000 0.00 0.00 0.00 3.51
699 855 0.618968 AAGCGGGTTCCTCATCCTCT 60.619 55.000 0.00 0.00 0.00 3.69
702 858 0.466124 CGGGTTCCTCATCCTCTTCC 59.534 60.000 0.00 0.00 0.00 3.46
704 860 2.200955 GGGTTCCTCATCCTCTTCCTT 58.799 52.381 0.00 0.00 0.00 3.36
705 861 2.092699 GGGTTCCTCATCCTCTTCCTTG 60.093 54.545 0.00 0.00 0.00 3.61
952 1108 1.964223 TCTTCTCTCTGTCACACACCC 59.036 52.381 0.00 0.00 0.00 4.61
953 1109 1.688735 CTTCTCTCTGTCACACACCCA 59.311 52.381 0.00 0.00 0.00 4.51
954 1110 1.788229 TCTCTCTGTCACACACCCAA 58.212 50.000 0.00 0.00 0.00 4.12
958 1127 0.106918 TCTGTCACACACCCAAACCC 60.107 55.000 0.00 0.00 0.00 4.11
961 1130 0.458260 GTCACACACCCAAACCCAAC 59.542 55.000 0.00 0.00 0.00 3.77
972 1141 1.134250 CAAACCCAACCCAACCCAAAG 60.134 52.381 0.00 0.00 0.00 2.77
1071 1246 4.135153 CCACGACTGCCTCCTCGG 62.135 72.222 0.00 0.00 34.07 4.63
1185 1360 4.357947 TGGCTCACGTCGCTGTCC 62.358 66.667 6.35 0.00 0.00 4.02
1506 1681 3.468770 GACGGTGTGCTCTCTCTCTATA 58.531 50.000 0.00 0.00 0.00 1.31
1543 1718 8.305046 TGAAGAATTAAATGGGGTATTTCTGG 57.695 34.615 0.00 0.00 39.61 3.86
1551 1726 3.364549 TGGGGTATTTCTGGCAAATGAG 58.635 45.455 0.00 0.00 0.00 2.90
1557 1732 4.644103 ATTTCTGGCAAATGAGGAATCG 57.356 40.909 0.00 0.00 0.00 3.34
1580 1755 0.665835 CCACGCCAGTGCAAAAGTTA 59.334 50.000 0.00 0.00 46.62 2.24
1581 1756 1.599419 CCACGCCAGTGCAAAAGTTAC 60.599 52.381 0.00 0.00 46.62 2.50
1583 1758 1.602377 ACGCCAGTGCAAAAGTTACTC 59.398 47.619 0.00 0.00 37.32 2.59
1586 1761 2.623416 GCCAGTGCAAAAGTTACTCCTT 59.377 45.455 0.00 0.00 37.47 3.36
1587 1762 3.068165 GCCAGTGCAAAAGTTACTCCTTT 59.932 43.478 0.00 0.00 36.23 3.11
1600 1775 7.997773 AGTTACTCCTTTCTTCCCAAAATAC 57.002 36.000 0.00 0.00 0.00 1.89
1607 1782 4.864704 TTCTTCCCAAAATACAAGGCAC 57.135 40.909 0.00 0.00 0.00 5.01
1758 1933 7.589958 TGGTATTGTGGATGTAACAGTTTTT 57.410 32.000 0.00 0.00 0.00 1.94
1852 2034 7.834681 TGATATACTATCTGGTAGATGGTGTCC 59.165 40.741 15.37 7.39 44.58 4.02
1872 2054 2.158667 CCGTGTAGCCCCTTCCAATATT 60.159 50.000 0.00 0.00 0.00 1.28
1914 2096 2.224523 TGGACTGGACTTGATGGTCAAC 60.225 50.000 0.00 0.00 37.91 3.18
2020 2202 1.472662 AACTGGACCACGACCCTCAG 61.473 60.000 0.00 0.00 0.00 3.35
2029 2211 1.264288 CACGACCCTCAGTTTTGCTTC 59.736 52.381 0.00 0.00 0.00 3.86
2086 2270 8.924511 ATTAGACTTCTTCAGAAATTGGAACA 57.075 30.769 0.00 0.00 33.07 3.18
2161 2348 5.772393 TGAAAGCTTCCCACCTCTAATTA 57.228 39.130 0.00 0.00 0.00 1.40
2205 2392 1.005215 CATGCCCTCCCTCTCTTGTTT 59.995 52.381 0.00 0.00 0.00 2.83
2208 2395 1.884067 GCCCTCCCTCTCTTGTTTGTG 60.884 57.143 0.00 0.00 0.00 3.33
2288 2475 6.017440 GCAGTTGTACCATCTCTACACAAAAA 60.017 38.462 0.00 0.00 31.44 1.94
2412 2599 3.476552 AGCGAGGTTTTCTCAAATGACA 58.523 40.909 0.00 0.00 42.55 3.58
2511 2698 2.338577 ACACTGCACTCAAAGAAGCT 57.661 45.000 0.00 0.00 0.00 3.74
2913 3100 8.891671 AGCTAAAACAATGTTTGATGTCAATT 57.108 26.923 12.50 0.00 35.55 2.32
2914 3101 9.328845 AGCTAAAACAATGTTTGATGTCAATTT 57.671 25.926 12.50 0.00 35.55 1.82
2915 3102 9.584839 GCTAAAACAATGTTTGATGTCAATTTC 57.415 29.630 12.50 0.00 35.55 2.17
2917 3104 8.735692 AAAACAATGTTTGATGTCAATTTCCT 57.264 26.923 12.50 0.00 35.55 3.36
2918 3105 9.829507 AAAACAATGTTTGATGTCAATTTCCTA 57.170 25.926 12.50 0.00 35.55 2.94
2921 3108 9.426837 ACAATGTTTGATGTCAATTTCCTATTG 57.573 29.630 0.00 0.00 35.55 1.90
3148 3345 5.270893 TGTTGCTAGTGTCAGTTCAACTA 57.729 39.130 18.37 8.72 35.96 2.24
3240 3437 9.987901 CGTCAAAAATTTACACATACAAATGAC 57.012 29.630 0.00 0.00 36.54 3.06
3394 3591 7.549488 ACATTACAGAGTATTTTGGAGTACTGC 59.451 37.037 7.56 7.56 31.61 4.40
3544 3741 0.542333 GGGCTCTCCTACTGTTTCCC 59.458 60.000 0.00 0.00 0.00 3.97
3545 3742 1.574263 GGCTCTCCTACTGTTTCCCT 58.426 55.000 0.00 0.00 0.00 4.20
3725 3923 0.039978 CCGTTTTGGCATGCAACGTA 60.040 50.000 28.79 7.61 41.35 3.57
3982 4180 3.152341 AGTCCCAAATGAGAAGCAACAG 58.848 45.455 0.00 0.00 0.00 3.16
4306 4504 5.533528 GCTTCCTGGAAACTACAAGGTTAAA 59.466 40.000 10.86 0.00 0.00 1.52
4404 4602 5.121811 ACATCTTGTGATCTTGGCTGATAC 58.878 41.667 0.00 0.00 0.00 2.24
4405 4603 5.104610 ACATCTTGTGATCTTGGCTGATACT 60.105 40.000 0.00 0.00 0.00 2.12
4406 4604 6.098838 ACATCTTGTGATCTTGGCTGATACTA 59.901 38.462 0.00 0.00 0.00 1.82
4527 4726 5.356882 TGGTTACTCAAAGATTCGCAAAG 57.643 39.130 0.00 0.00 0.00 2.77
4749 4949 2.954318 GCAGTGTCCAGGCATGAATAAT 59.046 45.455 0.00 0.00 0.00 1.28
4928 5128 8.341173 CCTTGAGATACATTCTTTTATGCTGTC 58.659 37.037 0.00 0.00 33.74 3.51
5021 5221 1.257743 TCAGTGGAGGTCCTCGAAAG 58.742 55.000 12.91 5.29 36.82 2.62
5057 5257 6.672147 TCAGTTTGCTCTTTTAGAAGCAATC 58.328 36.000 10.25 9.64 45.04 2.67
5085 5285 5.107375 GCACTTGCAATTGTCATACAAAAGG 60.107 40.000 17.00 0.00 40.33 3.11
5138 5338 3.661648 ATGACCACTGGGGCCACC 61.662 66.667 0.20 2.19 44.10 4.61
5238 5438 9.826574 TTGCGATAGAGGTACAAACTATAAAAT 57.173 29.630 0.00 0.00 39.76 1.82
5239 5439 9.256477 TGCGATAGAGGTACAAACTATAAAATG 57.744 33.333 0.00 0.00 39.76 2.32
5306 5506 7.201732 GGTGATTATGTTCATGTTGGTCTTAGG 60.202 40.741 0.00 0.00 0.00 2.69
5358 5698 4.813235 TTATGCCTGCCCCGCCAC 62.813 66.667 0.00 0.00 0.00 5.01
5431 5771 7.095857 CGGATAGTCTAGTGAAATTGCAATCTC 60.096 40.741 13.38 9.36 0.00 2.75
5433 5773 6.981762 AGTCTAGTGAAATTGCAATCTCTG 57.018 37.500 13.38 3.00 0.00 3.35
5434 5774 6.705302 AGTCTAGTGAAATTGCAATCTCTGA 58.295 36.000 13.38 5.15 0.00 3.27
5435 5775 7.164122 AGTCTAGTGAAATTGCAATCTCTGAA 58.836 34.615 13.38 0.00 0.00 3.02
5436 5776 7.663081 AGTCTAGTGAAATTGCAATCTCTGAAA 59.337 33.333 13.38 0.00 0.00 2.69
5437 5777 7.748241 GTCTAGTGAAATTGCAATCTCTGAAAC 59.252 37.037 13.38 2.65 0.00 2.78
5495 5844 5.613329 ACAAACGGTGAAGGATACAAGTAA 58.387 37.500 0.00 0.00 41.41 2.24
5607 5956 2.351726 GCCACGGTGCTGATACTAAAAG 59.648 50.000 1.68 0.00 0.00 2.27
5621 5970 7.909267 TGATACTAAAAGAAATGCATGTCTCG 58.091 34.615 19.84 10.93 0.00 4.04
5628 5977 5.227238 AGAAATGCATGTCTCGAATCAAC 57.773 39.130 14.00 0.00 0.00 3.18
5652 6001 4.202398 TGAGACCAAGCTTCAGTTCATTCT 60.202 41.667 0.00 0.00 0.00 2.40
5664 6013 3.633986 CAGTTCATTCTTTCCCCTATGCC 59.366 47.826 0.00 0.00 0.00 4.40
5795 6144 8.285394 GCACTGAGGTAAATACATCAATATGTG 58.715 37.037 15.26 15.26 44.94 3.21
5797 6146 9.330063 ACTGAGGTAAATACATCAATATGTGTG 57.670 33.333 8.97 0.00 44.94 3.82
5840 6239 6.553100 AGATTACCAAGAATACCTCTCTCCAG 59.447 42.308 0.00 0.00 31.02 3.86
5870 6271 3.728076 ATGATCCAACATGCATTCAGC 57.272 42.857 0.00 0.00 45.96 4.26
5944 6349 5.063312 GCTAGACAAAAGCAAAGCAAAACAA 59.937 36.000 0.00 0.00 39.83 2.83
5959 6364 4.082408 GCAAAACAAGGTGGGATTAGTACC 60.082 45.833 0.00 0.00 34.68 3.34
5972 6377 1.940883 TAGTACCGGCAGAGGCAACG 61.941 60.000 0.00 0.00 43.71 4.10
5991 6396 3.259064 ACGGAATTGTCAATACGTGAGG 58.741 45.455 20.71 2.73 36.74 3.86
6062 6467 7.145323 CAGAAATTTTGACCCGACTAAATGTT 58.855 34.615 0.00 0.00 0.00 2.71
6067 6472 3.443052 TGACCCGACTAAATGTTCCCTA 58.557 45.455 0.00 0.00 0.00 3.53
6188 6596 4.715527 AATCGGTAGTACCTTGTCTGTC 57.284 45.455 17.29 0.00 35.66 3.51
6227 6635 2.176273 CAGAGTATGCGTGGGCTGC 61.176 63.158 0.00 0.00 40.82 5.25
6263 6671 4.932146 AGTTGTTTTTCATTGAAGGTCCG 58.068 39.130 0.00 0.00 0.00 4.79
6269 6677 5.934935 TTTTCATTGAAGGTCCGTTAGTC 57.065 39.130 0.00 0.00 0.00 2.59
6291 6699 2.039216 CTCGGATAGGAGCTAGTGGAGA 59.961 54.545 0.00 0.00 0.00 3.71
6292 6700 2.442126 TCGGATAGGAGCTAGTGGAGAA 59.558 50.000 0.00 0.00 0.00 2.87
6307 6715 2.105821 TGGAGAAAATATACCCTGCCGG 59.894 50.000 0.00 0.00 37.81 6.13
6321 6729 3.002583 CCGGGGCTTTGGGCATTT 61.003 61.111 0.00 0.00 44.01 2.32
6322 6730 2.592032 CCGGGGCTTTGGGCATTTT 61.592 57.895 0.00 0.00 44.01 1.82
6323 6731 1.261238 CCGGGGCTTTGGGCATTTTA 61.261 55.000 0.00 0.00 44.01 1.52
6324 6732 0.175531 CGGGGCTTTGGGCATTTTAG 59.824 55.000 0.00 0.00 44.01 1.85
6325 6733 0.107703 GGGGCTTTGGGCATTTTAGC 60.108 55.000 0.00 0.00 44.01 3.09
6346 6754 9.747898 TTTAGCCAATTCTCTAAAAATAGTGGA 57.252 29.630 0.00 0.00 33.37 4.02
6347 6755 7.872113 AGCCAATTCTCTAAAAATAGTGGAG 57.128 36.000 0.00 0.00 0.00 3.86
6348 6756 7.406104 AGCCAATTCTCTAAAAATAGTGGAGT 58.594 34.615 0.00 0.00 0.00 3.85
6349 6757 8.548877 AGCCAATTCTCTAAAAATAGTGGAGTA 58.451 33.333 0.00 0.00 0.00 2.59
6350 6758 9.343539 GCCAATTCTCTAAAAATAGTGGAGTAT 57.656 33.333 0.00 0.00 0.00 2.12
6365 6773 3.449528 GAGTATCCGGTGGAGTAAACC 57.550 52.381 0.00 0.00 34.05 3.27
6366 6774 2.102084 GAGTATCCGGTGGAGTAAACCC 59.898 54.545 0.00 0.00 34.05 4.11
6367 6775 2.113807 GTATCCGGTGGAGTAAACCCT 58.886 52.381 0.00 0.00 34.05 4.34
6368 6776 1.665137 ATCCGGTGGAGTAAACCCTT 58.335 50.000 0.00 0.00 34.05 3.95
6369 6777 2.323999 TCCGGTGGAGTAAACCCTTA 57.676 50.000 0.00 0.00 33.88 2.69
6370 6778 2.181975 TCCGGTGGAGTAAACCCTTAG 58.818 52.381 0.00 0.00 33.88 2.18
6371 6779 1.904537 CCGGTGGAGTAAACCCTTAGT 59.095 52.381 0.00 0.00 33.88 2.24
6372 6780 2.354403 CCGGTGGAGTAAACCCTTAGTG 60.354 54.545 0.00 0.00 33.88 2.74
6373 6781 2.354403 CGGTGGAGTAAACCCTTAGTGG 60.354 54.545 0.00 0.00 33.88 4.00
6374 6782 2.908351 GGTGGAGTAAACCCTTAGTGGA 59.092 50.000 0.00 0.00 38.35 4.02
6375 6783 3.055312 GGTGGAGTAAACCCTTAGTGGAG 60.055 52.174 0.00 0.00 38.35 3.86
6376 6784 3.581770 GTGGAGTAAACCCTTAGTGGAGT 59.418 47.826 0.00 0.00 38.35 3.85
6377 6785 4.774200 GTGGAGTAAACCCTTAGTGGAGTA 59.226 45.833 0.00 0.00 38.35 2.59
6378 6786 5.424573 GTGGAGTAAACCCTTAGTGGAGTAT 59.575 44.000 0.00 0.00 38.35 2.12
6379 6787 5.659971 TGGAGTAAACCCTTAGTGGAGTATC 59.340 44.000 0.00 0.00 38.35 2.24
6380 6788 5.898397 GGAGTAAACCCTTAGTGGAGTATCT 59.102 44.000 0.00 0.00 38.35 1.98
6381 6789 6.383436 GGAGTAAACCCTTAGTGGAGTATCTT 59.617 42.308 0.00 0.00 38.35 2.40
6382 6790 7.092979 GGAGTAAACCCTTAGTGGAGTATCTTT 60.093 40.741 0.00 0.00 38.35 2.52
6383 6791 8.215954 AGTAAACCCTTAGTGGAGTATCTTTT 57.784 34.615 0.00 0.00 38.35 2.27
6384 6792 8.666821 AGTAAACCCTTAGTGGAGTATCTTTTT 58.333 33.333 0.00 0.00 38.35 1.94
6406 6814 6.746745 TTTACTCTATTAAGTTTTGGCCGG 57.253 37.500 0.00 0.00 0.00 6.13
6407 6815 4.563140 ACTCTATTAAGTTTTGGCCGGA 57.437 40.909 5.05 0.00 0.00 5.14
6408 6816 4.259356 ACTCTATTAAGTTTTGGCCGGAC 58.741 43.478 5.05 0.56 0.00 4.79
6409 6817 3.613030 TCTATTAAGTTTTGGCCGGACC 58.387 45.455 3.83 6.37 39.84 4.46
6410 6818 2.597578 ATTAAGTTTTGGCCGGACCT 57.402 45.000 3.83 0.00 40.22 3.85
6411 6819 3.724732 ATTAAGTTTTGGCCGGACCTA 57.275 42.857 3.83 0.00 40.22 3.08
6412 6820 2.773993 TAAGTTTTGGCCGGACCTAG 57.226 50.000 3.83 0.00 40.22 3.02
6413 6821 0.608308 AAGTTTTGGCCGGACCTAGC 60.608 55.000 3.83 0.00 40.22 3.42
6419 6827 3.231298 GCCGGACCTAGCCAATCT 58.769 61.111 5.05 0.00 0.00 2.40
6420 6828 1.069935 GCCGGACCTAGCCAATCTC 59.930 63.158 5.05 0.00 0.00 2.75
6421 6829 1.749033 CCGGACCTAGCCAATCTCC 59.251 63.158 0.00 0.00 0.00 3.71
6422 6830 0.760945 CCGGACCTAGCCAATCTCCT 60.761 60.000 0.00 0.00 0.00 3.69
6423 6831 1.480683 CCGGACCTAGCCAATCTCCTA 60.481 57.143 0.00 0.00 0.00 2.94
6424 6832 2.530701 CGGACCTAGCCAATCTCCTAT 58.469 52.381 0.00 0.00 0.00 2.57
6425 6833 3.563697 CCGGACCTAGCCAATCTCCTATA 60.564 52.174 0.00 0.00 0.00 1.31
6426 6834 4.282496 CGGACCTAGCCAATCTCCTATAT 58.718 47.826 0.00 0.00 0.00 0.86
6427 6835 4.712337 CGGACCTAGCCAATCTCCTATATT 59.288 45.833 0.00 0.00 0.00 1.28
6428 6836 5.187967 CGGACCTAGCCAATCTCCTATATTT 59.812 44.000 0.00 0.00 0.00 1.40
6429 6837 6.380274 CGGACCTAGCCAATCTCCTATATTTA 59.620 42.308 0.00 0.00 0.00 1.40
6430 6838 7.093465 CGGACCTAGCCAATCTCCTATATTTAA 60.093 40.741 0.00 0.00 0.00 1.52
6431 6839 8.041919 GGACCTAGCCAATCTCCTATATTTAAC 58.958 40.741 0.00 0.00 0.00 2.01
6432 6840 7.612677 ACCTAGCCAATCTCCTATATTTAACG 58.387 38.462 0.00 0.00 0.00 3.18
6433 6841 7.042335 CCTAGCCAATCTCCTATATTTAACGG 58.958 42.308 0.00 0.00 0.00 4.44
6434 6842 6.681729 AGCCAATCTCCTATATTTAACGGA 57.318 37.500 0.00 0.00 0.00 4.69
6435 6843 6.702329 AGCCAATCTCCTATATTTAACGGAG 58.298 40.000 0.00 0.00 43.44 4.63
6437 6845 7.453752 AGCCAATCTCCTATATTTAACGGAGTA 59.546 37.037 0.00 0.00 45.00 2.59
6438 6846 8.092687 GCCAATCTCCTATATTTAACGGAGTAA 58.907 37.037 0.00 0.00 45.00 2.24
6439 6847 9.991906 CCAATCTCCTATATTTAACGGAGTAAA 57.008 33.333 0.00 0.00 45.00 2.01
6473 6881 8.627487 TGCATAAATTTAACATCGATTCAACC 57.373 30.769 1.21 0.00 0.00 3.77
6474 6882 8.246871 TGCATAAATTTAACATCGATTCAACCA 58.753 29.630 1.21 0.00 0.00 3.67
6475 6883 9.081997 GCATAAATTTAACATCGATTCAACCAA 57.918 29.630 1.21 0.00 0.00 3.67
6482 6890 5.844301 ACATCGATTCAACCAAAATTTGC 57.156 34.783 0.00 0.00 0.00 3.68
6483 6891 5.295950 ACATCGATTCAACCAAAATTTGCA 58.704 33.333 0.00 0.00 0.00 4.08
6484 6892 5.933463 ACATCGATTCAACCAAAATTTGCAT 59.067 32.000 0.00 0.00 0.00 3.96
6485 6893 7.095910 ACATCGATTCAACCAAAATTTGCATA 58.904 30.769 0.00 0.00 0.00 3.14
6486 6894 6.942886 TCGATTCAACCAAAATTTGCATAC 57.057 33.333 0.00 0.00 0.00 2.39
6487 6895 6.450545 TCGATTCAACCAAAATTTGCATACA 58.549 32.000 0.00 0.00 0.00 2.29
6488 6896 7.095910 TCGATTCAACCAAAATTTGCATACAT 58.904 30.769 0.00 0.00 0.00 2.29
6489 6897 7.601886 TCGATTCAACCAAAATTTGCATACATT 59.398 29.630 0.00 0.00 0.00 2.71
6490 6898 8.229137 CGATTCAACCAAAATTTGCATACATTT 58.771 29.630 0.00 0.00 0.00 2.32
6495 6903 9.941664 CAACCAAAATTTGCATACATTTAAACA 57.058 25.926 0.00 0.00 0.00 2.83
6504 6912 8.948631 TTGCATACATTTAAACAAAAGTTCCA 57.051 26.923 0.00 0.00 0.00 3.53
6505 6913 8.948631 TGCATACATTTAAACAAAAGTTCCAA 57.051 26.923 0.00 0.00 0.00 3.53
6506 6914 8.821894 TGCATACATTTAAACAAAAGTTCCAAC 58.178 29.630 0.00 0.00 0.00 3.77
6507 6915 8.001549 GCATACATTTAAACAAAAGTTCCAACG 58.998 33.333 0.00 0.00 0.00 4.10
6508 6916 9.026074 CATACATTTAAACAAAAGTTCCAACGT 57.974 29.630 0.00 0.00 0.00 3.99
6510 6918 8.623310 ACATTTAAACAAAAGTTCCAACGTAG 57.377 30.769 0.00 0.00 0.00 3.51
6511 6919 7.221259 ACATTTAAACAAAAGTTCCAACGTAGC 59.779 33.333 0.00 0.00 0.00 3.58
6512 6920 4.976224 AAACAAAAGTTCCAACGTAGCT 57.024 36.364 0.00 0.00 0.00 3.32
6513 6921 4.976224 AACAAAAGTTCCAACGTAGCTT 57.024 36.364 0.00 0.00 0.00 3.74
6514 6922 4.547406 ACAAAAGTTCCAACGTAGCTTC 57.453 40.909 0.00 0.00 0.00 3.86
6515 6923 3.942748 ACAAAAGTTCCAACGTAGCTTCA 59.057 39.130 0.00 0.00 0.00 3.02
6516 6924 4.396790 ACAAAAGTTCCAACGTAGCTTCAA 59.603 37.500 0.00 0.00 0.00 2.69
6517 6925 4.547406 AAAGTTCCAACGTAGCTTCAAC 57.453 40.909 0.00 0.00 0.00 3.18
6518 6926 3.470645 AGTTCCAACGTAGCTTCAACT 57.529 42.857 0.00 0.00 0.00 3.16
6519 6927 3.805207 AGTTCCAACGTAGCTTCAACTT 58.195 40.909 0.00 0.00 0.00 2.66
6520 6928 4.952460 AGTTCCAACGTAGCTTCAACTTA 58.048 39.130 0.00 0.00 0.00 2.24
6521 6929 4.989168 AGTTCCAACGTAGCTTCAACTTAG 59.011 41.667 0.00 0.00 0.00 2.18
6522 6930 4.595762 TCCAACGTAGCTTCAACTTAGT 57.404 40.909 0.00 0.00 0.00 2.24
6523 6931 4.553323 TCCAACGTAGCTTCAACTTAGTC 58.447 43.478 0.00 0.00 0.00 2.59
6524 6932 4.280174 TCCAACGTAGCTTCAACTTAGTCT 59.720 41.667 0.00 0.00 0.00 3.24
6525 6933 4.989168 CCAACGTAGCTTCAACTTAGTCTT 59.011 41.667 0.00 0.00 0.00 3.01
6526 6934 6.016024 TCCAACGTAGCTTCAACTTAGTCTTA 60.016 38.462 0.00 0.00 0.00 2.10
6527 6935 6.643770 CCAACGTAGCTTCAACTTAGTCTTAA 59.356 38.462 0.00 0.00 0.00 1.85
6528 6936 7.359014 CCAACGTAGCTTCAACTTAGTCTTAAC 60.359 40.741 0.00 0.00 0.00 2.01
6529 6937 6.742109 ACGTAGCTTCAACTTAGTCTTAACA 58.258 36.000 0.00 0.00 0.00 2.41
6530 6938 7.205297 ACGTAGCTTCAACTTAGTCTTAACAA 58.795 34.615 0.00 0.00 0.00 2.83
6531 6939 7.871463 ACGTAGCTTCAACTTAGTCTTAACAAT 59.129 33.333 0.00 0.00 0.00 2.71
6532 6940 8.709646 CGTAGCTTCAACTTAGTCTTAACAATT 58.290 33.333 0.00 0.00 0.00 2.32
6533 6941 9.813080 GTAGCTTCAACTTAGTCTTAACAATTG 57.187 33.333 3.24 3.24 0.00 2.32
6534 6942 8.677148 AGCTTCAACTTAGTCTTAACAATTGA 57.323 30.769 13.59 0.00 0.00 2.57
6535 6943 9.120538 AGCTTCAACTTAGTCTTAACAATTGAA 57.879 29.630 13.59 0.00 34.58 2.69
6536 6944 9.730420 GCTTCAACTTAGTCTTAACAATTGAAA 57.270 29.630 13.59 5.19 35.17 2.69
6545 6953 7.611770 AGTCTTAACAATTGAAATTTAGGCCC 58.388 34.615 13.59 0.00 0.00 5.80
6546 6954 7.454694 AGTCTTAACAATTGAAATTTAGGCCCT 59.545 33.333 13.59 0.00 0.00 5.19
6547 6955 8.745590 GTCTTAACAATTGAAATTTAGGCCCTA 58.254 33.333 13.59 0.00 0.00 3.53
6548 6956 9.487442 TCTTAACAATTGAAATTTAGGCCCTAT 57.513 29.630 13.59 0.00 0.00 2.57
6551 6959 6.805713 ACAATTGAAATTTAGGCCCTATTCG 58.194 36.000 13.59 0.00 0.00 3.34
6552 6960 6.183360 ACAATTGAAATTTAGGCCCTATTCGG 60.183 38.462 13.59 0.00 0.00 4.30
6553 6961 4.781775 TGAAATTTAGGCCCTATTCGGA 57.218 40.909 0.00 0.00 33.16 4.55
6554 6962 5.118729 TGAAATTTAGGCCCTATTCGGAA 57.881 39.130 0.00 0.00 33.16 4.30
6555 6963 5.701224 TGAAATTTAGGCCCTATTCGGAAT 58.299 37.500 8.49 8.49 33.16 3.01
6556 6964 5.768164 TGAAATTTAGGCCCTATTCGGAATC 59.232 40.000 6.49 0.00 33.16 2.52
6557 6965 5.584551 AATTTAGGCCCTATTCGGAATCT 57.415 39.130 6.49 0.52 33.16 2.40
6558 6966 4.618920 TTTAGGCCCTATTCGGAATCTC 57.381 45.455 6.49 0.00 33.16 2.75
6559 6967 2.407340 AGGCCCTATTCGGAATCTCT 57.593 50.000 6.49 0.00 33.16 3.10
6560 6968 2.252714 AGGCCCTATTCGGAATCTCTC 58.747 52.381 6.49 0.00 33.16 3.20
6561 6969 1.276705 GGCCCTATTCGGAATCTCTCC 59.723 57.143 6.49 1.88 41.40 3.71
6562 6970 1.971357 GCCCTATTCGGAATCTCTCCA 59.029 52.381 6.49 0.00 45.74 3.86
6563 6971 2.289133 GCCCTATTCGGAATCTCTCCAC 60.289 54.545 6.49 0.00 45.74 4.02
6564 6972 3.235200 CCCTATTCGGAATCTCTCCACT 58.765 50.000 6.49 0.00 45.74 4.00
6565 6973 3.643792 CCCTATTCGGAATCTCTCCACTT 59.356 47.826 6.49 0.00 45.74 3.16
6566 6974 4.262249 CCCTATTCGGAATCTCTCCACTTC 60.262 50.000 6.49 0.00 45.74 3.01
6567 6975 2.941453 TTCGGAATCTCTCCACTTCG 57.059 50.000 0.00 0.00 45.74 3.79
6568 6976 1.835494 TCGGAATCTCTCCACTTCGT 58.165 50.000 0.00 0.00 45.74 3.85
6569 6977 1.472878 TCGGAATCTCTCCACTTCGTG 59.527 52.381 0.00 0.00 45.74 4.35
6579 6987 3.678921 CACTTCGTGGAGTTGTGGA 57.321 52.632 0.00 0.00 0.00 4.02
6580 6988 1.502231 CACTTCGTGGAGTTGTGGAG 58.498 55.000 0.00 0.00 0.00 3.86
6581 6989 0.249911 ACTTCGTGGAGTTGTGGAGC 60.250 55.000 0.00 0.00 0.00 4.70
6582 6990 0.034059 CTTCGTGGAGTTGTGGAGCT 59.966 55.000 0.00 0.00 0.00 4.09
6583 6991 0.033504 TTCGTGGAGTTGTGGAGCTC 59.966 55.000 4.71 4.71 0.00 4.09
6584 6992 1.734477 CGTGGAGTTGTGGAGCTCG 60.734 63.158 7.83 0.00 32.83 5.03
6585 6993 1.374758 GTGGAGTTGTGGAGCTCGG 60.375 63.158 7.83 0.00 32.83 4.63
6586 6994 1.837051 TGGAGTTGTGGAGCTCGGT 60.837 57.895 7.83 0.00 32.83 4.69
6587 6995 1.371558 GGAGTTGTGGAGCTCGGTT 59.628 57.895 7.83 0.00 32.83 4.44
6588 6996 0.250338 GGAGTTGTGGAGCTCGGTTT 60.250 55.000 7.83 0.00 32.83 3.27
6589 6997 1.594331 GAGTTGTGGAGCTCGGTTTT 58.406 50.000 7.83 0.00 0.00 2.43
6590 6998 1.264288 GAGTTGTGGAGCTCGGTTTTG 59.736 52.381 7.83 0.00 0.00 2.44
6591 6999 0.310854 GTTGTGGAGCTCGGTTTTGG 59.689 55.000 7.83 0.00 0.00 3.28
6592 7000 1.452145 TTGTGGAGCTCGGTTTTGGC 61.452 55.000 7.83 0.00 0.00 4.52
6593 7001 1.896660 GTGGAGCTCGGTTTTGGCA 60.897 57.895 7.83 0.00 0.00 4.92
6594 7002 1.600636 TGGAGCTCGGTTTTGGCAG 60.601 57.895 7.83 0.00 0.00 4.85
6595 7003 2.563427 GAGCTCGGTTTTGGCAGC 59.437 61.111 0.00 0.00 0.00 5.25
6596 7004 1.968540 GAGCTCGGTTTTGGCAGCT 60.969 57.895 0.00 0.00 45.07 4.24
6597 7005 1.968540 AGCTCGGTTTTGGCAGCTC 60.969 57.895 0.00 0.00 37.72 4.09
6598 7006 2.982744 GCTCGGTTTTGGCAGCTCC 61.983 63.158 0.00 0.00 0.00 4.70
6599 7007 1.600636 CTCGGTTTTGGCAGCTCCA 60.601 57.895 1.25 1.25 44.85 3.86
6600 7008 0.962356 CTCGGTTTTGGCAGCTCCAT 60.962 55.000 5.83 0.00 46.04 3.41
6601 7009 0.960364 TCGGTTTTGGCAGCTCCATC 60.960 55.000 5.83 1.67 46.04 3.51
6602 7010 1.243342 CGGTTTTGGCAGCTCCATCA 61.243 55.000 5.83 0.00 46.04 3.07
6603 7011 0.968405 GGTTTTGGCAGCTCCATCAA 59.032 50.000 5.83 1.09 46.04 2.57
6604 7012 1.344114 GGTTTTGGCAGCTCCATCAAA 59.656 47.619 5.83 2.91 46.04 2.69
6605 7013 2.611224 GGTTTTGGCAGCTCCATCAAAG 60.611 50.000 5.83 0.00 46.04 2.77
6606 7014 1.999648 TTTGGCAGCTCCATCAAAGT 58.000 45.000 5.83 0.00 46.04 2.66
6607 7015 1.250328 TTGGCAGCTCCATCAAAGTG 58.750 50.000 5.83 0.00 46.04 3.16
6608 7016 0.401356 TGGCAGCTCCATCAAAGTGA 59.599 50.000 1.25 0.00 40.72 3.41
6609 7017 1.093159 GGCAGCTCCATCAAAGTGAG 58.907 55.000 0.00 0.00 34.01 3.51
6613 7021 2.105006 GCTCCATCAAAGTGAGCTGA 57.895 50.000 0.00 0.00 46.19 4.26
6614 7022 2.430465 GCTCCATCAAAGTGAGCTGAA 58.570 47.619 0.00 0.00 46.19 3.02
6615 7023 2.816087 GCTCCATCAAAGTGAGCTGAAA 59.184 45.455 0.00 0.00 46.19 2.69
6616 7024 3.442977 GCTCCATCAAAGTGAGCTGAAAT 59.557 43.478 0.00 0.00 46.19 2.17
6617 7025 4.082354 GCTCCATCAAAGTGAGCTGAAATT 60.082 41.667 0.00 0.00 46.19 1.82
6618 7026 5.124457 GCTCCATCAAAGTGAGCTGAAATTA 59.876 40.000 0.00 0.00 46.19 1.40
6619 7027 6.677431 GCTCCATCAAAGTGAGCTGAAATTAG 60.677 42.308 0.00 0.00 46.19 1.73
6620 7028 5.649395 TCCATCAAAGTGAGCTGAAATTAGG 59.351 40.000 0.00 0.00 0.00 2.69
6621 7029 5.416952 CCATCAAAGTGAGCTGAAATTAGGT 59.583 40.000 0.00 0.00 0.00 3.08
6622 7030 6.404074 CCATCAAAGTGAGCTGAAATTAGGTC 60.404 42.308 0.00 1.24 43.61 3.85
6623 7031 5.003804 TCAAAGTGAGCTGAAATTAGGTCC 58.996 41.667 0.00 0.00 42.89 4.46
6624 7032 3.252974 AGTGAGCTGAAATTAGGTCCG 57.747 47.619 0.00 0.00 42.89 4.79
6625 7033 1.666189 GTGAGCTGAAATTAGGTCCGC 59.334 52.381 0.00 0.00 42.89 5.54
6626 7034 1.555075 TGAGCTGAAATTAGGTCCGCT 59.445 47.619 0.00 0.47 42.89 5.52
6627 7035 2.205911 GAGCTGAAATTAGGTCCGCTC 58.794 52.381 0.00 6.36 42.55 5.03
6628 7036 1.134371 AGCTGAAATTAGGTCCGCTCC 60.134 52.381 0.00 0.00 30.74 4.70
6629 7037 1.571919 CTGAAATTAGGTCCGCTCCG 58.428 55.000 0.00 0.00 0.00 4.63
6903 7311 2.850439 TCGACGTCGAACTCATCCT 58.150 52.632 36.25 0.00 46.30 3.24
6904 7312 0.446616 TCGACGTCGAACTCATCCTG 59.553 55.000 36.25 5.24 46.30 3.86
6905 7313 0.446616 CGACGTCGAACTCATCCTGA 59.553 55.000 33.35 0.00 43.02 3.86
6906 7314 1.790838 CGACGTCGAACTCATCCTGAC 60.791 57.143 33.35 0.00 43.02 3.51
6907 7315 0.526662 ACGTCGAACTCATCCTGACC 59.473 55.000 0.00 0.00 0.00 4.02
6908 7316 0.179134 CGTCGAACTCATCCTGACCC 60.179 60.000 0.00 0.00 0.00 4.46
6909 7317 1.187087 GTCGAACTCATCCTGACCCT 58.813 55.000 0.00 0.00 0.00 4.34
6910 7318 1.135333 GTCGAACTCATCCTGACCCTC 59.865 57.143 0.00 0.00 0.00 4.30
6911 7319 0.101399 CGAACTCATCCTGACCCTCG 59.899 60.000 0.00 0.00 0.00 4.63
6912 7320 1.187087 GAACTCATCCTGACCCTCGT 58.813 55.000 0.00 0.00 0.00 4.18
6913 7321 1.135333 GAACTCATCCTGACCCTCGTC 59.865 57.143 0.00 0.00 39.66 4.20
6914 7322 1.032657 ACTCATCCTGACCCTCGTCG 61.033 60.000 0.00 0.00 42.37 5.12
6915 7323 1.001269 TCATCCTGACCCTCGTCGT 60.001 57.895 0.00 0.00 42.37 4.34
6916 7324 1.030488 TCATCCTGACCCTCGTCGTC 61.030 60.000 0.00 0.00 42.37 4.20
6917 7325 2.113433 ATCCTGACCCTCGTCGTCG 61.113 63.158 0.00 0.00 42.37 5.12
6918 7326 4.477975 CCTGACCCTCGTCGTCGC 62.478 72.222 0.00 0.00 42.37 5.19
6919 7327 3.733960 CTGACCCTCGTCGTCGCA 61.734 66.667 0.00 0.00 42.37 5.10
6920 7328 3.669036 CTGACCCTCGTCGTCGCAG 62.669 68.421 0.00 0.00 42.37 5.18
6921 7329 3.735029 GACCCTCGTCGTCGCAGT 61.735 66.667 0.00 0.00 36.96 4.40
6922 7330 3.664223 GACCCTCGTCGTCGCAGTC 62.664 68.421 0.00 0.64 36.96 3.51
6923 7331 3.733960 CCCTCGTCGTCGCAGTCA 61.734 66.667 0.00 0.00 36.96 3.41
6924 7332 2.254350 CCTCGTCGTCGCAGTCAA 59.746 61.111 0.00 0.00 36.96 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 8.768957 TCAAAAACAAATGTTCACAGATTTCA 57.231 26.923 0.00 0.00 37.25 2.69
34 35 6.639212 CCGATTCAAAAACAAATGTTCACAG 58.361 36.000 0.00 0.00 37.25 3.66
40 41 3.971150 TCGCCGATTCAAAAACAAATGT 58.029 36.364 0.00 0.00 0.00 2.71
41 42 4.208047 TGTTCGCCGATTCAAAAACAAATG 59.792 37.500 0.00 0.00 0.00 2.32
42 43 4.363999 TGTTCGCCGATTCAAAAACAAAT 58.636 34.783 0.00 0.00 0.00 2.32
43 44 3.770666 TGTTCGCCGATTCAAAAACAAA 58.229 36.364 0.00 0.00 0.00 2.83
44 45 3.422417 TGTTCGCCGATTCAAAAACAA 57.578 38.095 0.00 0.00 0.00 2.83
45 46 3.634568 ATGTTCGCCGATTCAAAAACA 57.365 38.095 0.00 0.00 0.00 2.83
46 47 4.965042 AAATGTTCGCCGATTCAAAAAC 57.035 36.364 0.00 0.00 0.00 2.43
47 48 5.975410 AAAAATGTTCGCCGATTCAAAAA 57.025 30.435 0.00 0.00 0.00 1.94
282 326 1.919240 ATGCATATGGCCCATGAGTG 58.081 50.000 16.58 3.93 43.89 3.51
283 327 3.628008 CATATGCATATGGCCCATGAGT 58.372 45.455 31.05 0.85 43.89 3.41
317 364 3.136763 CAACGGCTGATGCATATTCTCT 58.863 45.455 0.00 0.00 41.91 3.10
373 420 6.976636 TGATGCTACGATGATGTAAAAACA 57.023 33.333 0.00 0.00 0.00 2.83
386 434 2.279741 GTGCCAGAAATGATGCTACGA 58.720 47.619 0.00 0.00 0.00 3.43
387 435 2.009051 TGTGCCAGAAATGATGCTACG 58.991 47.619 0.00 0.00 0.00 3.51
388 436 4.644103 AATGTGCCAGAAATGATGCTAC 57.356 40.909 0.00 0.00 0.00 3.58
402 450 6.790285 ATGATGTTTTTCTTCAAATGTGCC 57.210 33.333 0.00 0.00 34.65 5.01
414 463 5.927689 TCACATGCCAGAAATGATGTTTTTC 59.072 36.000 0.00 0.00 34.08 2.29
434 483 7.725818 TGCATTTTTATGAGCAATTTTCACA 57.274 28.000 0.00 0.00 33.48 3.58
443 492 5.402997 TGGTTGATGCATTTTTATGAGCA 57.597 34.783 0.00 0.00 41.73 4.26
450 499 3.559242 CGTTGGTTGGTTGATGCATTTTT 59.441 39.130 0.00 0.00 0.00 1.94
462 511 6.713450 AGTTGAGAAATATTACGTTGGTTGGT 59.287 34.615 0.00 0.00 0.00 3.67
510 621 6.488006 AGCTAGCTTTCTGATTCTCACAAAAA 59.512 34.615 12.68 0.00 0.00 1.94
511 622 6.000219 AGCTAGCTTTCTGATTCTCACAAAA 59.000 36.000 12.68 0.00 0.00 2.44
512 623 5.555017 AGCTAGCTTTCTGATTCTCACAAA 58.445 37.500 12.68 0.00 0.00 2.83
513 624 5.157940 AGCTAGCTTTCTGATTCTCACAA 57.842 39.130 12.68 0.00 0.00 3.33
514 625 4.815533 AGCTAGCTTTCTGATTCTCACA 57.184 40.909 12.68 0.00 0.00 3.58
515 626 4.744631 GCTAGCTAGCTTTCTGATTCTCAC 59.255 45.833 33.71 3.53 45.62 3.51
516 627 4.942852 GCTAGCTAGCTTTCTGATTCTCA 58.057 43.478 33.71 0.00 45.62 3.27
545 656 2.521958 ATCTCCAACGGCCCGTCAAG 62.522 60.000 10.32 7.75 39.99 3.02
547 658 3.000819 ATCTCCAACGGCCCGTCA 61.001 61.111 10.32 0.00 39.99 4.35
548 659 2.511600 CATCTCCAACGGCCCGTC 60.512 66.667 10.32 0.00 39.99 4.79
549 660 4.096003 CCATCTCCAACGGCCCGT 62.096 66.667 1.02 1.02 43.97 5.28
550 661 2.608970 AATCCATCTCCAACGGCCCG 62.609 60.000 0.00 0.00 0.00 6.13
551 662 0.395724 AAATCCATCTCCAACGGCCC 60.396 55.000 0.00 0.00 0.00 5.80
552 663 0.740737 CAAATCCATCTCCAACGGCC 59.259 55.000 0.00 0.00 0.00 6.13
553 664 1.750193 TCAAATCCATCTCCAACGGC 58.250 50.000 0.00 0.00 0.00 5.68
554 665 3.609853 TCTTCAAATCCATCTCCAACGG 58.390 45.455 0.00 0.00 0.00 4.44
555 666 4.637534 ACATCTTCAAATCCATCTCCAACG 59.362 41.667 0.00 0.00 0.00 4.10
556 667 5.163581 CCACATCTTCAAATCCATCTCCAAC 60.164 44.000 0.00 0.00 0.00 3.77
557 668 4.951715 CCACATCTTCAAATCCATCTCCAA 59.048 41.667 0.00 0.00 0.00 3.53
558 669 4.227982 TCCACATCTTCAAATCCATCTCCA 59.772 41.667 0.00 0.00 0.00 3.86
560 671 4.275443 GCTCCACATCTTCAAATCCATCTC 59.725 45.833 0.00 0.00 0.00 2.75
562 673 3.003068 CGCTCCACATCTTCAAATCCATC 59.997 47.826 0.00 0.00 0.00 3.51
564 675 2.290260 ACGCTCCACATCTTCAAATCCA 60.290 45.455 0.00 0.00 0.00 3.41
566 677 2.096496 CCACGCTCCACATCTTCAAATC 59.904 50.000 0.00 0.00 0.00 2.17
626 781 2.279517 GCCGGTATCAGCGTGAGG 60.280 66.667 1.90 0.00 37.40 3.86
677 833 1.075536 AGGATGAGGAACCCGCTTTTT 59.924 47.619 0.00 0.00 0.00 1.94
678 834 0.698818 AGGATGAGGAACCCGCTTTT 59.301 50.000 0.00 0.00 0.00 2.27
679 835 0.253327 GAGGATGAGGAACCCGCTTT 59.747 55.000 0.00 0.00 0.00 3.51
680 836 0.618968 AGAGGATGAGGAACCCGCTT 60.619 55.000 0.00 0.00 0.00 4.68
906 1062 6.788218 AGAAGAGGAAGAGGATGATGTTTTT 58.212 36.000 0.00 0.00 0.00 1.94
907 1063 6.215227 AGAGAAGAGGAAGAGGATGATGTTTT 59.785 38.462 0.00 0.00 0.00 2.43
908 1064 5.725822 AGAGAAGAGGAAGAGGATGATGTTT 59.274 40.000 0.00 0.00 0.00 2.83
909 1065 5.279685 AGAGAAGAGGAAGAGGATGATGTT 58.720 41.667 0.00 0.00 0.00 2.71
910 1066 4.882559 AGAGAAGAGGAAGAGGATGATGT 58.117 43.478 0.00 0.00 0.00 3.06
911 1067 5.142639 AGAGAGAAGAGGAAGAGGATGATG 58.857 45.833 0.00 0.00 0.00 3.07
912 1068 5.408079 AGAGAGAAGAGGAAGAGGATGAT 57.592 43.478 0.00 0.00 0.00 2.45
952 1108 0.912486 TTTGGGTTGGGTTGGGTTTG 59.088 50.000 0.00 0.00 0.00 2.93
953 1109 1.208706 CTTTGGGTTGGGTTGGGTTT 58.791 50.000 0.00 0.00 0.00 3.27
954 1110 0.043485 ACTTTGGGTTGGGTTGGGTT 59.957 50.000 0.00 0.00 0.00 4.11
958 1127 3.028130 ACTGTTACTTTGGGTTGGGTTG 58.972 45.455 0.00 0.00 0.00 3.77
961 1130 2.817844 GCTACTGTTACTTTGGGTTGGG 59.182 50.000 0.00 0.00 0.00 4.12
972 1141 2.889018 GCCGCGGGCTACTGTTAC 60.889 66.667 29.38 1.03 46.69 2.50
1027 1202 3.578272 CGGAGGAGGAGACGCGAG 61.578 72.222 15.93 0.00 0.00 5.03
1543 1718 1.745087 TGGAAGCGATTCCTCATTTGC 59.255 47.619 30.75 4.62 41.65 3.68
1551 1726 2.435938 TGGCGTGGAAGCGATTCC 60.436 61.111 25.35 25.35 41.48 3.01
1557 1732 3.286751 TTGCACTGGCGTGGAAGC 61.287 61.111 11.01 0.00 44.94 3.86
1565 1740 2.230660 AGGAGTAACTTTTGCACTGGC 58.769 47.619 0.00 0.00 41.68 4.85
1571 1746 4.583073 TGGGAAGAAAGGAGTAACTTTTGC 59.417 41.667 0.00 0.00 40.55 3.68
1580 1755 5.775195 CCTTGTATTTTGGGAAGAAAGGAGT 59.225 40.000 0.00 0.00 35.94 3.85
1581 1756 5.336770 GCCTTGTATTTTGGGAAGAAAGGAG 60.337 44.000 0.00 0.00 35.94 3.69
1583 1758 4.283212 TGCCTTGTATTTTGGGAAGAAAGG 59.717 41.667 0.00 0.00 36.77 3.11
1586 1761 4.038642 GTGTGCCTTGTATTTTGGGAAGAA 59.961 41.667 0.00 0.00 0.00 2.52
1587 1762 3.572255 GTGTGCCTTGTATTTTGGGAAGA 59.428 43.478 0.00 0.00 0.00 2.87
1600 1775 3.632145 AGGACAAAAGTTAGTGTGCCTTG 59.368 43.478 7.30 0.00 36.82 3.61
1607 1782 9.490379 AAGTGTATCTTAGGACAAAAGTTAGTG 57.510 33.333 0.00 0.00 34.23 2.74
1758 1933 8.990163 AAGGTTGACCAAGTTTATAGAGAAAA 57.010 30.769 2.56 0.00 38.89 2.29
1762 1938 7.876068 TGTGTAAGGTTGACCAAGTTTATAGAG 59.124 37.037 2.56 0.00 38.89 2.43
1852 2034 2.930826 ATATTGGAAGGGGCTACACG 57.069 50.000 0.00 0.00 0.00 4.49
1872 2054 4.645136 CCAGCACCTATAGTCTGTGAAGTA 59.355 45.833 10.69 0.00 31.66 2.24
1949 2131 6.474427 TCTTGTTCTACACACACGAAGTAAAG 59.526 38.462 0.00 0.00 41.61 1.85
1957 2139 3.702330 TGAGTCTTGTTCTACACACACG 58.298 45.455 0.00 0.00 33.98 4.49
2004 2186 1.052124 AAACTGAGGGTCGTGGTCCA 61.052 55.000 0.00 0.00 0.00 4.02
2020 2202 7.532682 TTTCACAAATACAAGGAAGCAAAAC 57.467 32.000 0.00 0.00 0.00 2.43
2074 2256 1.786441 TCCCCCTGTGTTCCAATTTCT 59.214 47.619 0.00 0.00 0.00 2.52
2086 2270 0.487772 ACTAGTGAGTGTCCCCCTGT 59.512 55.000 0.00 0.00 33.41 4.00
2412 2599 9.479549 AACAAGGATAAACCAATCACATCTAAT 57.520 29.630 0.00 0.00 42.04 1.73
2511 2698 3.006112 AGATCTGTAGAACGAGCCTCA 57.994 47.619 0.00 0.00 0.00 3.86
2914 3101 9.832445 GTAGAAACATCAATAGGAACAATAGGA 57.168 33.333 0.00 0.00 0.00 2.94
2915 3102 9.838339 AGTAGAAACATCAATAGGAACAATAGG 57.162 33.333 0.00 0.00 0.00 2.57
3651 3848 9.174166 ACTGTGTTCGAAATAGGCTAATTTTAT 57.826 29.630 0.00 0.00 0.00 1.40
3722 3920 9.335891 TGAAACATACAAAACAAATAGCATACG 57.664 29.630 0.00 0.00 0.00 3.06
3815 4013 0.535780 CTGCAAACTGCTGACCTGGA 60.536 55.000 0.00 0.00 45.31 3.86
4033 4231 4.346418 CCTTAGTGCTACTGGATCCTTCAT 59.654 45.833 14.23 0.00 0.00 2.57
4306 4504 9.911788 ACAGAAATCATAATATCTTGACCAGTT 57.088 29.630 0.00 0.00 0.00 3.16
4351 4549 2.413310 TGAAAAAGGATACCTCGGGC 57.587 50.000 0.00 0.00 30.89 6.13
4496 4694 9.261180 CGAATCTTTGAGTAACCATACACATAT 57.739 33.333 0.00 0.00 33.51 1.78
4497 4695 7.223971 GCGAATCTTTGAGTAACCATACACATA 59.776 37.037 0.00 0.00 33.51 2.29
4527 4726 4.515567 GCTATTTAACTGGTAGGTCATGGC 59.484 45.833 0.00 0.00 0.00 4.40
4657 4857 5.746245 CCTCTGAAACTTAGCGTGATAAGAG 59.254 44.000 11.50 0.00 36.46 2.85
4833 5033 4.205587 CCTCCAAATCAAATCTCTCTGGG 58.794 47.826 0.00 0.00 0.00 4.45
4928 5128 8.136057 TGTAACCATTTTGCAACAGTAAAATG 57.864 30.769 18.53 18.53 46.14 2.32
4962 5162 3.567478 AAGAGGTGATAATGGGAGCAC 57.433 47.619 0.00 0.00 34.95 4.40
5021 5221 2.880890 AGCAAACTGATCTCCAACACAC 59.119 45.455 0.00 0.00 0.00 3.82
5057 5257 0.030504 TGACAATTGCAAGTGCCACG 59.969 50.000 25.59 3.15 41.18 4.94
5085 5285 0.242017 GCCACAAGCTGAATGTCCAC 59.758 55.000 0.00 0.00 38.99 4.02
5238 5438 0.970427 TGCCCGTGAGAGATACAGCA 60.970 55.000 0.00 0.00 0.00 4.41
5239 5439 0.249238 CTGCCCGTGAGAGATACAGC 60.249 60.000 0.00 0.00 0.00 4.40
5306 5506 9.604626 CTTTCAACTGATCTAAACAAACTCATC 57.395 33.333 0.00 0.00 0.00 2.92
5358 5698 6.461110 AAATACTTTCAGCCATCTCATTGG 57.539 37.500 0.00 0.00 39.94 3.16
5396 5736 6.785337 TCACTAGACTATCCGGATCAAAAA 57.215 37.500 23.08 1.13 0.00 1.94
5397 5737 6.785337 TTCACTAGACTATCCGGATCAAAA 57.215 37.500 23.08 1.58 0.00 2.44
5399 5739 6.978674 ATTTCACTAGACTATCCGGATCAA 57.021 37.500 23.08 2.90 0.00 2.57
5400 5740 6.738731 GCAATTTCACTAGACTATCCGGATCA 60.739 42.308 23.08 6.83 0.00 2.92
5401 5741 5.635700 GCAATTTCACTAGACTATCCGGATC 59.364 44.000 23.08 8.01 0.00 3.36
5431 5771 5.574830 CAGTACTACAGCAGCTAAGTTTCAG 59.425 44.000 13.42 0.00 0.00 3.02
5433 5773 4.327627 GCAGTACTACAGCAGCTAAGTTTC 59.672 45.833 13.42 8.55 30.40 2.78
5434 5774 4.246458 GCAGTACTACAGCAGCTAAGTTT 58.754 43.478 13.42 2.64 30.40 2.66
5435 5775 3.258372 TGCAGTACTACAGCAGCTAAGTT 59.742 43.478 13.42 0.00 35.66 2.66
5436 5776 2.826128 TGCAGTACTACAGCAGCTAAGT 59.174 45.455 12.90 12.90 35.66 2.24
5437 5777 3.182967 GTGCAGTACTACAGCAGCTAAG 58.817 50.000 6.53 0.00 41.29 2.18
5495 5844 2.825086 GTTTCAGAAACGTGCAGTGT 57.175 45.000 10.30 0.00 0.00 3.55
5515 5864 5.091431 CAGCAGCTATTGTTTTAGTCAAGC 58.909 41.667 0.00 0.00 0.00 4.01
5518 5867 5.874810 CCTACAGCAGCTATTGTTTTAGTCA 59.125 40.000 7.49 0.00 0.00 3.41
5607 5956 5.026462 CAGTTGATTCGAGACATGCATTTC 58.974 41.667 4.61 4.61 0.00 2.17
5621 5970 4.067896 TGAAGCTTGGTCTCAGTTGATTC 58.932 43.478 2.10 0.00 0.00 2.52
5628 5977 3.117491 TGAACTGAAGCTTGGTCTCAG 57.883 47.619 2.10 7.32 34.85 3.35
5652 6001 2.378547 AGAAAGTGTGGCATAGGGGAAA 59.621 45.455 0.00 0.00 0.00 3.13
5664 6013 6.548441 TTTATACCCGAAACAGAAAGTGTG 57.452 37.500 0.00 0.00 40.26 3.82
5703 6052 2.304180 ACAGTCCCTGTGGAAGAGAATG 59.696 50.000 0.00 0.00 43.63 2.67
5713 6062 7.500992 ACTTACATTCATATACAGTCCCTGTG 58.499 38.462 7.13 0.00 45.01 3.66
5797 6146 9.865321 TGGTAATCTGTAGTTCTGTAACATTAC 57.135 33.333 0.00 0.00 38.12 1.89
5840 6239 4.866486 GCATGTTGGATCATTCTGGAAAAC 59.134 41.667 0.00 0.00 0.00 2.43
5944 6349 0.325860 TGCCGGTACTAATCCCACCT 60.326 55.000 1.90 0.00 0.00 4.00
5959 6364 2.040544 AATTCCGTTGCCTCTGCCG 61.041 57.895 0.00 0.00 36.33 5.69
5972 6377 3.181510 GCACCTCACGTATTGACAATTCC 60.182 47.826 5.89 0.00 0.00 3.01
6003 6408 9.962809 AAATATTCCAAACATGTCCAAATTGAT 57.037 25.926 0.00 0.00 0.00 2.57
6062 6467 5.338381 CCTGCTGAAAAGATACAAGTAGGGA 60.338 44.000 0.00 0.00 0.00 4.20
6067 6472 4.762251 GGAACCTGCTGAAAAGATACAAGT 59.238 41.667 0.00 0.00 0.00 3.16
6248 6656 4.041198 AGGACTAACGGACCTTCAATGAAA 59.959 41.667 0.00 0.00 36.76 2.69
6252 6660 2.165845 CGAGGACTAACGGACCTTCAAT 59.834 50.000 0.00 0.00 40.01 2.57
6254 6662 1.171308 CGAGGACTAACGGACCTTCA 58.829 55.000 0.00 0.00 40.01 3.02
6307 6715 0.107703 GGCTAAAATGCCCAAAGCCC 60.108 55.000 0.06 0.00 45.69 5.19
6320 6728 9.747898 TCCACTATTTTTAGAGAATTGGCTAAA 57.252 29.630 5.62 5.62 35.45 1.85
6321 6729 9.396022 CTCCACTATTTTTAGAGAATTGGCTAA 57.604 33.333 0.00 0.00 0.00 3.09
6322 6730 8.548877 ACTCCACTATTTTTAGAGAATTGGCTA 58.451 33.333 0.00 0.00 0.00 3.93
6323 6731 7.406104 ACTCCACTATTTTTAGAGAATTGGCT 58.594 34.615 0.00 0.00 0.00 4.75
6324 6732 7.631717 ACTCCACTATTTTTAGAGAATTGGC 57.368 36.000 0.00 0.00 0.00 4.52
6327 6735 9.765795 CGGATACTCCACTATTTTTAGAGAATT 57.234 33.333 0.00 0.00 35.91 2.17
6328 6736 8.368668 CCGGATACTCCACTATTTTTAGAGAAT 58.631 37.037 0.00 0.00 35.91 2.40
6329 6737 7.343833 ACCGGATACTCCACTATTTTTAGAGAA 59.656 37.037 9.46 0.00 35.91 2.87
6330 6738 6.837568 ACCGGATACTCCACTATTTTTAGAGA 59.162 38.462 9.46 0.00 35.91 3.10
6331 6739 6.924060 CACCGGATACTCCACTATTTTTAGAG 59.076 42.308 9.46 0.00 35.91 2.43
6332 6740 6.183360 CCACCGGATACTCCACTATTTTTAGA 60.183 42.308 9.46 0.00 35.91 2.10
6333 6741 5.989777 CCACCGGATACTCCACTATTTTTAG 59.010 44.000 9.46 0.00 35.91 1.85
6334 6742 5.662208 TCCACCGGATACTCCACTATTTTTA 59.338 40.000 9.46 0.00 35.91 1.52
6335 6743 4.472108 TCCACCGGATACTCCACTATTTTT 59.528 41.667 9.46 0.00 35.91 1.94
6336 6744 4.035112 TCCACCGGATACTCCACTATTTT 58.965 43.478 9.46 0.00 35.91 1.82
6337 6745 3.641906 CTCCACCGGATACTCCACTATTT 59.358 47.826 9.46 0.00 35.91 1.40
6338 6746 3.231818 CTCCACCGGATACTCCACTATT 58.768 50.000 9.46 0.00 35.91 1.73
6339 6747 2.177233 ACTCCACCGGATACTCCACTAT 59.823 50.000 9.46 0.00 35.91 2.12
6340 6748 1.567649 ACTCCACCGGATACTCCACTA 59.432 52.381 9.46 0.00 35.91 2.74
6341 6749 0.335361 ACTCCACCGGATACTCCACT 59.665 55.000 9.46 0.00 35.91 4.00
6342 6750 2.062971 TACTCCACCGGATACTCCAC 57.937 55.000 9.46 0.00 35.91 4.02
6343 6751 2.762327 GTTTACTCCACCGGATACTCCA 59.238 50.000 9.46 0.00 35.91 3.86
6344 6752 2.102084 GGTTTACTCCACCGGATACTCC 59.898 54.545 9.46 0.00 0.00 3.85
6345 6753 2.102084 GGGTTTACTCCACCGGATACTC 59.898 54.545 9.46 0.00 34.79 2.59
6346 6754 2.113807 GGGTTTACTCCACCGGATACT 58.886 52.381 9.46 0.00 34.79 2.12
6347 6755 2.113807 AGGGTTTACTCCACCGGATAC 58.886 52.381 9.46 0.00 34.79 2.24
6348 6756 2.555732 AGGGTTTACTCCACCGGATA 57.444 50.000 9.46 0.00 34.79 2.59
6349 6757 1.665137 AAGGGTTTACTCCACCGGAT 58.335 50.000 9.46 0.00 34.79 4.18
6350 6758 2.181975 CTAAGGGTTTACTCCACCGGA 58.818 52.381 9.46 0.00 34.79 5.14
6351 6759 1.904537 ACTAAGGGTTTACTCCACCGG 59.095 52.381 0.00 0.00 34.79 5.28
6352 6760 2.354403 CCACTAAGGGTTTACTCCACCG 60.354 54.545 0.00 0.00 34.79 4.94
6353 6761 2.908351 TCCACTAAGGGTTTACTCCACC 59.092 50.000 0.00 0.00 38.24 4.61
6354 6762 3.581770 ACTCCACTAAGGGTTTACTCCAC 59.418 47.826 0.00 0.00 38.24 4.02
6355 6763 3.865571 ACTCCACTAAGGGTTTACTCCA 58.134 45.455 0.00 0.00 38.24 3.86
6356 6764 5.898397 AGATACTCCACTAAGGGTTTACTCC 59.102 44.000 0.00 0.00 38.24 3.85
6357 6765 7.421087 AAGATACTCCACTAAGGGTTTACTC 57.579 40.000 0.00 0.00 38.24 2.59
6358 6766 7.809880 AAAGATACTCCACTAAGGGTTTACT 57.190 36.000 0.00 0.00 38.24 2.24
6359 6767 8.859236 AAAAAGATACTCCACTAAGGGTTTAC 57.141 34.615 0.00 0.00 38.24 2.01
6381 6789 7.447853 TCCGGCCAAAACTTAATAGAGTAAAAA 59.552 33.333 2.24 0.00 0.00 1.94
6382 6790 6.941436 TCCGGCCAAAACTTAATAGAGTAAAA 59.059 34.615 2.24 0.00 0.00 1.52
6383 6791 6.372381 GTCCGGCCAAAACTTAATAGAGTAAA 59.628 38.462 2.24 0.00 0.00 2.01
6384 6792 5.876460 GTCCGGCCAAAACTTAATAGAGTAA 59.124 40.000 2.24 0.00 0.00 2.24
6385 6793 5.422145 GTCCGGCCAAAACTTAATAGAGTA 58.578 41.667 2.24 0.00 0.00 2.59
6386 6794 4.259356 GTCCGGCCAAAACTTAATAGAGT 58.741 43.478 2.24 0.00 0.00 3.24
6387 6795 3.626217 GGTCCGGCCAAAACTTAATAGAG 59.374 47.826 2.24 0.00 37.17 2.43
6388 6796 3.264964 AGGTCCGGCCAAAACTTAATAGA 59.735 43.478 15.92 0.00 40.61 1.98
6389 6797 3.617284 AGGTCCGGCCAAAACTTAATAG 58.383 45.455 15.92 0.00 40.61 1.73
6390 6798 3.724732 AGGTCCGGCCAAAACTTAATA 57.275 42.857 15.92 0.00 40.61 0.98
6391 6799 2.597578 AGGTCCGGCCAAAACTTAAT 57.402 45.000 15.92 0.00 40.61 1.40
6392 6800 2.876892 GCTAGGTCCGGCCAAAACTTAA 60.877 50.000 15.92 0.00 40.61 1.85
6393 6801 1.339342 GCTAGGTCCGGCCAAAACTTA 60.339 52.381 15.92 0.00 40.61 2.24
6394 6802 0.608308 GCTAGGTCCGGCCAAAACTT 60.608 55.000 15.92 0.00 40.61 2.66
6395 6803 1.002502 GCTAGGTCCGGCCAAAACT 60.003 57.895 15.92 0.00 40.61 2.66
6396 6804 2.044555 GGCTAGGTCCGGCCAAAAC 61.045 63.158 19.59 0.00 46.84 2.43
6397 6805 2.353573 GGCTAGGTCCGGCCAAAA 59.646 61.111 19.59 2.13 46.84 2.44
6402 6810 1.069935 GAGATTGGCTAGGTCCGGC 59.930 63.158 0.00 1.90 0.00 6.13
6403 6811 0.760945 AGGAGATTGGCTAGGTCCGG 60.761 60.000 0.00 0.00 32.14 5.14
6404 6812 1.996798 TAGGAGATTGGCTAGGTCCG 58.003 55.000 0.00 0.00 32.14 4.79
6405 6813 6.628644 AAATATAGGAGATTGGCTAGGTCC 57.371 41.667 0.00 0.00 0.00 4.46
6406 6814 7.760340 CGTTAAATATAGGAGATTGGCTAGGTC 59.240 40.741 0.00 0.00 0.00 3.85
6407 6815 7.310485 CCGTTAAATATAGGAGATTGGCTAGGT 60.310 40.741 0.00 0.00 0.00 3.08
6408 6816 7.042335 CCGTTAAATATAGGAGATTGGCTAGG 58.958 42.308 0.00 0.00 0.00 3.02
6409 6817 7.837863 TCCGTTAAATATAGGAGATTGGCTAG 58.162 38.462 0.00 0.00 0.00 3.42
6410 6818 7.786046 TCCGTTAAATATAGGAGATTGGCTA 57.214 36.000 0.00 0.00 0.00 3.93
6411 6819 6.681729 TCCGTTAAATATAGGAGATTGGCT 57.318 37.500 0.00 0.00 0.00 4.75
6447 6855 9.248291 GGTTGAATCGATGTTAAATTTATGCAT 57.752 29.630 3.79 3.79 0.00 3.96
6448 6856 8.246871 TGGTTGAATCGATGTTAAATTTATGCA 58.753 29.630 0.00 2.45 0.00 3.96
6449 6857 8.627487 TGGTTGAATCGATGTTAAATTTATGC 57.373 30.769 0.00 0.00 0.00 3.14
6456 6864 8.279103 GCAAATTTTGGTTGAATCGATGTTAAA 58.721 29.630 10.96 0.00 0.00 1.52
6457 6865 7.439356 TGCAAATTTTGGTTGAATCGATGTTAA 59.561 29.630 10.96 0.00 0.00 2.01
6458 6866 6.925718 TGCAAATTTTGGTTGAATCGATGTTA 59.074 30.769 10.96 0.00 0.00 2.41
6459 6867 5.757320 TGCAAATTTTGGTTGAATCGATGTT 59.243 32.000 10.96 0.00 0.00 2.71
6460 6868 5.295950 TGCAAATTTTGGTTGAATCGATGT 58.704 33.333 10.96 0.00 0.00 3.06
6461 6869 5.842619 TGCAAATTTTGGTTGAATCGATG 57.157 34.783 10.96 0.00 0.00 3.84
6462 6870 7.095910 TGTATGCAAATTTTGGTTGAATCGAT 58.904 30.769 10.96 0.00 0.00 3.59
6463 6871 6.450545 TGTATGCAAATTTTGGTTGAATCGA 58.549 32.000 10.96 0.00 0.00 3.59
6464 6872 6.702972 TGTATGCAAATTTTGGTTGAATCG 57.297 33.333 10.96 0.00 0.00 3.34
6469 6877 9.941664 TGTTTAAATGTATGCAAATTTTGGTTG 57.058 25.926 10.96 0.00 0.00 3.77
6478 6886 9.383519 TGGAACTTTTGTTTAAATGTATGCAAA 57.616 25.926 0.00 0.00 43.66 3.68
6479 6887 8.948631 TGGAACTTTTGTTTAAATGTATGCAA 57.051 26.923 0.00 0.00 43.66 4.08
6480 6888 8.821894 GTTGGAACTTTTGTTTAAATGTATGCA 58.178 29.630 0.00 0.00 43.66 3.96
6481 6889 8.001549 CGTTGGAACTTTTGTTTAAATGTATGC 58.998 33.333 0.00 0.00 43.66 3.14
6482 6890 9.026074 ACGTTGGAACTTTTGTTTAAATGTATG 57.974 29.630 0.00 0.00 43.66 2.39
6484 6892 9.719279 CTACGTTGGAACTTTTGTTTAAATGTA 57.281 29.630 0.00 0.00 43.66 2.29
6485 6893 7.221259 GCTACGTTGGAACTTTTGTTTAAATGT 59.779 33.333 0.00 0.00 43.66 2.71
6486 6894 7.434013 AGCTACGTTGGAACTTTTGTTTAAATG 59.566 33.333 0.00 0.00 43.66 2.32
6487 6895 7.485810 AGCTACGTTGGAACTTTTGTTTAAAT 58.514 30.769 0.00 0.00 43.66 1.40
6488 6896 6.854778 AGCTACGTTGGAACTTTTGTTTAAA 58.145 32.000 0.00 0.00 43.66 1.52
6489 6897 6.439675 AGCTACGTTGGAACTTTTGTTTAA 57.560 33.333 0.00 0.00 43.66 1.52
6490 6898 6.093771 TGAAGCTACGTTGGAACTTTTGTTTA 59.906 34.615 0.00 0.00 43.66 2.01
6491 6899 4.976224 AGCTACGTTGGAACTTTTGTTT 57.024 36.364 0.00 0.00 43.66 2.83
6492 6900 4.396790 TGAAGCTACGTTGGAACTTTTGTT 59.603 37.500 0.00 0.00 46.75 2.83
6493 6901 3.942748 TGAAGCTACGTTGGAACTTTTGT 59.057 39.130 0.00 0.00 0.00 2.83
6494 6902 4.545823 TGAAGCTACGTTGGAACTTTTG 57.454 40.909 0.00 0.00 0.00 2.44
6495 6903 4.638865 AGTTGAAGCTACGTTGGAACTTTT 59.361 37.500 0.00 0.00 0.00 2.27
6496 6904 4.196971 AGTTGAAGCTACGTTGGAACTTT 58.803 39.130 0.00 0.00 0.00 2.66
6497 6905 3.805207 AGTTGAAGCTACGTTGGAACTT 58.195 40.909 0.00 0.00 0.00 2.66
6498 6906 3.470645 AGTTGAAGCTACGTTGGAACT 57.529 42.857 0.00 0.00 0.00 3.01
6499 6907 4.748600 ACTAAGTTGAAGCTACGTTGGAAC 59.251 41.667 0.00 0.00 0.00 3.62
6500 6908 4.952460 ACTAAGTTGAAGCTACGTTGGAA 58.048 39.130 0.00 0.00 0.00 3.53
6501 6909 4.280174 AGACTAAGTTGAAGCTACGTTGGA 59.720 41.667 0.00 0.00 0.00 3.53
6502 6910 4.557205 AGACTAAGTTGAAGCTACGTTGG 58.443 43.478 0.00 0.00 0.00 3.77
6503 6911 7.168637 TGTTAAGACTAAGTTGAAGCTACGTTG 59.831 37.037 0.00 0.00 0.00 4.10
6504 6912 7.205297 TGTTAAGACTAAGTTGAAGCTACGTT 58.795 34.615 0.00 0.00 0.00 3.99
6505 6913 6.742109 TGTTAAGACTAAGTTGAAGCTACGT 58.258 36.000 0.00 0.00 0.00 3.57
6506 6914 7.633361 TTGTTAAGACTAAGTTGAAGCTACG 57.367 36.000 0.00 0.00 0.00 3.51
6507 6915 9.813080 CAATTGTTAAGACTAAGTTGAAGCTAC 57.187 33.333 0.00 0.00 0.00 3.58
6508 6916 9.772973 TCAATTGTTAAGACTAAGTTGAAGCTA 57.227 29.630 5.13 0.00 0.00 3.32
6509 6917 8.677148 TCAATTGTTAAGACTAAGTTGAAGCT 57.323 30.769 5.13 0.00 0.00 3.74
6510 6918 9.730420 TTTCAATTGTTAAGACTAAGTTGAAGC 57.270 29.630 5.13 0.00 36.21 3.86
6519 6927 8.745590 GGGCCTAAATTTCAATTGTTAAGACTA 58.254 33.333 0.84 0.00 0.00 2.59
6520 6928 7.454694 AGGGCCTAAATTTCAATTGTTAAGACT 59.545 33.333 2.82 0.00 0.00 3.24
6521 6929 7.611770 AGGGCCTAAATTTCAATTGTTAAGAC 58.388 34.615 2.82 0.00 0.00 3.01
6522 6930 7.790782 AGGGCCTAAATTTCAATTGTTAAGA 57.209 32.000 2.82 0.00 0.00 2.10
6525 6933 8.410141 CGAATAGGGCCTAAATTTCAATTGTTA 58.590 33.333 18.91 0.00 0.00 2.41
6526 6934 7.264947 CGAATAGGGCCTAAATTTCAATTGTT 58.735 34.615 18.91 2.10 0.00 2.83
6527 6935 6.183360 CCGAATAGGGCCTAAATTTCAATTGT 60.183 38.462 18.91 0.00 35.97 2.71
6528 6936 6.040391 TCCGAATAGGGCCTAAATTTCAATTG 59.960 38.462 18.91 0.00 41.52 2.32
6529 6937 6.133356 TCCGAATAGGGCCTAAATTTCAATT 58.867 36.000 18.91 5.41 41.52 2.32
6530 6938 5.701224 TCCGAATAGGGCCTAAATTTCAAT 58.299 37.500 18.91 0.00 41.52 2.57
6531 6939 5.118729 TCCGAATAGGGCCTAAATTTCAA 57.881 39.130 18.91 5.50 41.52 2.69
6532 6940 4.781775 TCCGAATAGGGCCTAAATTTCA 57.218 40.909 18.91 0.00 41.52 2.69
6533 6941 6.004574 AGATTCCGAATAGGGCCTAAATTTC 58.995 40.000 18.91 15.48 41.52 2.17
6534 6942 5.953571 AGATTCCGAATAGGGCCTAAATTT 58.046 37.500 18.91 7.54 41.52 1.82
6535 6943 5.310857 AGAGATTCCGAATAGGGCCTAAATT 59.689 40.000 18.91 9.53 41.52 1.82
6536 6944 4.846940 AGAGATTCCGAATAGGGCCTAAAT 59.153 41.667 18.91 12.14 41.52 1.40
6537 6945 4.232091 AGAGATTCCGAATAGGGCCTAAA 58.768 43.478 18.91 7.25 41.52 1.85
6538 6946 3.833070 GAGAGATTCCGAATAGGGCCTAA 59.167 47.826 18.91 1.27 41.52 2.69
6539 6947 3.432378 GAGAGATTCCGAATAGGGCCTA 58.568 50.000 17.16 17.16 41.52 3.93
6540 6948 2.252714 GAGAGATTCCGAATAGGGCCT 58.747 52.381 12.58 12.58 41.52 5.19
6541 6949 1.276705 GGAGAGATTCCGAATAGGGCC 59.723 57.143 0.00 0.00 41.52 5.80
6542 6950 2.753055 GGAGAGATTCCGAATAGGGC 57.247 55.000 0.00 0.00 41.52 5.19
6563 6971 0.034059 AGCTCCACAACTCCACGAAG 59.966 55.000 0.00 0.00 0.00 3.79
6564 6972 0.033504 GAGCTCCACAACTCCACGAA 59.966 55.000 0.87 0.00 0.00 3.85
6565 6973 1.666011 GAGCTCCACAACTCCACGA 59.334 57.895 0.87 0.00 0.00 4.35
6566 6974 1.734477 CGAGCTCCACAACTCCACG 60.734 63.158 8.47 0.00 0.00 4.94
6567 6975 1.374758 CCGAGCTCCACAACTCCAC 60.375 63.158 8.47 0.00 0.00 4.02
6568 6976 1.407656 AACCGAGCTCCACAACTCCA 61.408 55.000 8.47 0.00 0.00 3.86
6569 6977 0.250338 AAACCGAGCTCCACAACTCC 60.250 55.000 8.47 0.00 0.00 3.85
6570 6978 1.264288 CAAAACCGAGCTCCACAACTC 59.736 52.381 8.47 0.00 0.00 3.01
6571 6979 1.308998 CAAAACCGAGCTCCACAACT 58.691 50.000 8.47 0.00 0.00 3.16
6572 6980 0.310854 CCAAAACCGAGCTCCACAAC 59.689 55.000 8.47 0.00 0.00 3.32
6573 6981 1.452145 GCCAAAACCGAGCTCCACAA 61.452 55.000 8.47 0.00 0.00 3.33
6574 6982 1.896660 GCCAAAACCGAGCTCCACA 60.897 57.895 8.47 0.00 0.00 4.17
6575 6983 1.856265 CTGCCAAAACCGAGCTCCAC 61.856 60.000 8.47 0.00 0.00 4.02
6576 6984 1.600636 CTGCCAAAACCGAGCTCCA 60.601 57.895 8.47 0.00 0.00 3.86
6577 6985 2.982744 GCTGCCAAAACCGAGCTCC 61.983 63.158 8.47 0.00 0.00 4.70
6578 6986 1.968540 AGCTGCCAAAACCGAGCTC 60.969 57.895 2.73 2.73 37.17 4.09
6579 6987 1.968540 GAGCTGCCAAAACCGAGCT 60.969 57.895 0.00 0.00 44.50 4.09
6580 6988 2.563427 GAGCTGCCAAAACCGAGC 59.437 61.111 0.00 0.00 0.00 5.03
6581 6989 1.600636 TGGAGCTGCCAAAACCGAG 60.601 57.895 1.53 0.00 45.87 4.63
6582 6990 2.513395 TGGAGCTGCCAAAACCGA 59.487 55.556 1.53 0.00 45.87 4.69
6590 6998 1.093159 CTCACTTTGATGGAGCTGCC 58.907 55.000 1.53 0.00 37.10 4.85
6595 7003 5.640189 AATTTCAGCTCACTTTGATGGAG 57.360 39.130 0.00 0.00 0.00 3.86
6596 7004 5.649395 CCTAATTTCAGCTCACTTTGATGGA 59.351 40.000 0.00 0.00 0.00 3.41
6597 7005 5.416952 ACCTAATTTCAGCTCACTTTGATGG 59.583 40.000 0.00 0.00 0.00 3.51
6598 7006 6.404074 GGACCTAATTTCAGCTCACTTTGATG 60.404 42.308 0.00 0.00 0.00 3.07
6599 7007 5.649831 GGACCTAATTTCAGCTCACTTTGAT 59.350 40.000 0.00 0.00 0.00 2.57
6600 7008 5.003804 GGACCTAATTTCAGCTCACTTTGA 58.996 41.667 0.00 0.00 0.00 2.69
6601 7009 4.142816 CGGACCTAATTTCAGCTCACTTTG 60.143 45.833 0.00 0.00 0.00 2.77
6602 7010 4.003648 CGGACCTAATTTCAGCTCACTTT 58.996 43.478 0.00 0.00 0.00 2.66
6603 7011 3.600388 CGGACCTAATTTCAGCTCACTT 58.400 45.455 0.00 0.00 0.00 3.16
6604 7012 2.678190 GCGGACCTAATTTCAGCTCACT 60.678 50.000 0.00 0.00 32.14 3.41
6605 7013 1.666189 GCGGACCTAATTTCAGCTCAC 59.334 52.381 0.00 0.00 32.14 3.51
6606 7014 1.555075 AGCGGACCTAATTTCAGCTCA 59.445 47.619 0.00 0.00 39.97 4.26
6607 7015 2.317530 AGCGGACCTAATTTCAGCTC 57.682 50.000 0.00 0.00 39.97 4.09
6608 7016 1.134371 GGAGCGGACCTAATTTCAGCT 60.134 52.381 3.35 3.35 45.67 4.24
6609 7017 1.300481 GGAGCGGACCTAATTTCAGC 58.700 55.000 0.00 0.00 34.73 4.26
6610 7018 1.571919 CGGAGCGGACCTAATTTCAG 58.428 55.000 0.00 0.00 0.00 3.02
6611 7019 3.752796 CGGAGCGGACCTAATTTCA 57.247 52.632 0.00 0.00 0.00 2.69
6884 7292 1.530031 CAGGATGAGTTCGACGTCGAG 60.530 57.143 35.76 19.92 44.97 4.04
6885 7293 0.446616 CAGGATGAGTTCGACGTCGA 59.553 55.000 34.97 34.97 43.23 4.20
6886 7294 0.446616 TCAGGATGAGTTCGACGTCG 59.553 55.000 31.30 31.30 42.56 5.12
6898 7306 1.433879 GACGACGAGGGTCAGGATG 59.566 63.158 0.00 0.00 43.61 3.51
6899 7307 2.113433 CGACGACGAGGGTCAGGAT 61.113 63.158 0.00 0.00 43.61 3.24
6900 7308 2.745100 CGACGACGAGGGTCAGGA 60.745 66.667 0.00 0.00 43.61 3.86
6901 7309 4.477975 GCGACGACGAGGGTCAGG 62.478 72.222 12.29 0.00 43.61 3.86
6902 7310 3.669036 CTGCGACGACGAGGGTCAG 62.669 68.421 12.29 4.50 43.61 3.51
6903 7311 3.733960 CTGCGACGACGAGGGTCA 61.734 66.667 12.29 0.00 43.61 4.02
6904 7312 3.664223 GACTGCGACGACGAGGGTC 62.664 68.421 12.29 11.01 42.66 4.46
6905 7313 3.735029 GACTGCGACGACGAGGGT 61.735 66.667 12.29 5.74 42.66 4.34
6906 7314 3.263503 TTGACTGCGACGACGAGGG 62.264 63.158 12.29 2.42 42.66 4.30
6907 7315 2.254350 TTGACTGCGACGACGAGG 59.746 61.111 12.29 4.98 42.66 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.