Multiple sequence alignment - TraesCS1A01G204700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G204700 chr1A 100.000 3092 0 0 1 3092 366542259 366545350 0.000000e+00 5710.0
1 TraesCS1A01G204700 chr1D 96.548 1738 24 9 798 2522 294131376 294133090 0.000000e+00 2844.0
2 TraesCS1A01G204700 chr1D 90.115 698 68 1 2 699 294130410 294131106 0.000000e+00 905.0
3 TraesCS1A01G204700 chr1D 97.826 92 2 0 2582 2673 294133099 294133190 3.190000e-35 159.0
4 TraesCS1A01G204700 chr1B 96.626 1630 31 7 788 2397 395752124 395753749 0.000000e+00 2684.0
5 TraesCS1A01G204700 chr1B 88.920 704 75 3 1 703 395730677 395731378 0.000000e+00 865.0
6 TraesCS1A01G204700 chr1B 91.139 316 6 2 2669 2963 667364264 667364578 2.870000e-110 409.0
7 TraesCS1A01G204700 chr1B 95.652 92 4 0 2582 2673 395753911 395754002 6.910000e-32 148.0
8 TraesCS1A01G204700 chr4D 88.758 1103 107 15 1001 2093 487631864 487632959 0.000000e+00 1334.0
9 TraesCS1A01G204700 chr4B 88.091 1100 120 11 1001 2093 623163618 623164713 0.000000e+00 1295.0
10 TraesCS1A01G204700 chr5A 87.975 1106 113 17 1001 2093 669564673 669565771 0.000000e+00 1288.0
11 TraesCS1A01G204700 chr5A 91.139 316 6 2 2669 2963 459338842 459339156 2.870000e-110 409.0
12 TraesCS1A01G204700 chr5A 94.531 128 4 1 2968 3092 69550310 69550437 8.750000e-46 195.0
13 TraesCS1A01G204700 chr5A 92.683 123 6 2 2973 3092 633636304 633636426 1.140000e-39 174.0
14 TraesCS1A01G204700 chr6B 90.506 316 8 2 2669 2963 687996982 687997296 6.210000e-107 398.0
15 TraesCS1A01G204700 chr6B 90.190 316 9 3 2669 2963 687972870 687973184 2.890000e-105 392.0
16 TraesCS1A01G204700 chr3B 89.873 316 9 7 2669 2963 463458646 463458959 4.840000e-103 385.0
17 TraesCS1A01G204700 chr6A 95.122 123 3 1 2973 3092 63309738 63309616 1.130000e-44 191.0
18 TraesCS1A01G204700 chr6A 93.701 127 5 1 2969 3092 100937618 100937744 1.460000e-43 187.0
19 TraesCS1A01G204700 chr6A 92.742 124 6 1 2972 3092 491002029 491002152 3.170000e-40 176.0
20 TraesCS1A01G204700 chr7A 93.077 130 5 3 2966 3092 664105100 664105228 1.460000e-43 187.0
21 TraesCS1A01G204700 chr7A 94.309 123 4 3 2972 3091 706308349 706308227 5.270000e-43 185.0
22 TraesCS1A01G204700 chr7A 92.126 127 7 1 2969 3092 673413351 673413225 3.170000e-40 176.0
23 TraesCS1A01G204700 chr7A 94.737 38 1 1 708 745 195549539 195549503 1.200000e-04 58.4
24 TraesCS1A01G204700 chr2A 93.496 123 6 1 2972 3092 780769204 780769326 6.810000e-42 182.0
25 TraesCS1A01G204700 chr5B 88.732 71 8 0 217 287 575599736 575599666 1.530000e-13 87.9
26 TraesCS1A01G204700 chr6D 95.556 45 1 1 706 749 127392758 127392714 1.540000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G204700 chr1A 366542259 366545350 3091 False 5710.000000 5710 100.000000 1 3092 1 chr1A.!!$F1 3091
1 TraesCS1A01G204700 chr1D 294130410 294133190 2780 False 1302.666667 2844 94.829667 2 2673 3 chr1D.!!$F1 2671
2 TraesCS1A01G204700 chr1B 395752124 395754002 1878 False 1416.000000 2684 96.139000 788 2673 2 chr1B.!!$F3 1885
3 TraesCS1A01G204700 chr1B 395730677 395731378 701 False 865.000000 865 88.920000 1 703 1 chr1B.!!$F1 702
4 TraesCS1A01G204700 chr4D 487631864 487632959 1095 False 1334.000000 1334 88.758000 1001 2093 1 chr4D.!!$F1 1092
5 TraesCS1A01G204700 chr4B 623163618 623164713 1095 False 1295.000000 1295 88.091000 1001 2093 1 chr4B.!!$F1 1092
6 TraesCS1A01G204700 chr5A 669564673 669565771 1098 False 1288.000000 1288 87.975000 1001 2093 1 chr5A.!!$F4 1092

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
703 706 0.674581 TTTCTGCAGCTGGACGGATG 60.675 55.0 17.12 0.0 0.0 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2579 2825 0.030908 GAACCGCAGATCCGACCTAG 59.969 60.0 0.0 0.0 0.0 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 4.381185 GGAAAATCAAACCGGTGGTATTCC 60.381 45.833 8.52 14.05 33.12 3.01
41 42 0.956902 AAACCGGTGGTATTCCGCAC 60.957 55.000 8.52 0.00 45.71 5.34
43 44 2.182284 CGGTGGTATTCCGCACGA 59.818 61.111 4.19 0.00 45.25 4.35
72 73 3.002791 CAGAGAGGAAACATTAGCGCAA 58.997 45.455 11.47 1.85 0.00 4.85
73 74 3.624861 CAGAGAGGAAACATTAGCGCAAT 59.375 43.478 11.47 4.57 0.00 3.56
98 99 1.837439 CTAGTTATGCCCACACTCCCA 59.163 52.381 0.00 0.00 0.00 4.37
163 165 0.898789 TTCTTCGCCGGAGTCCTTCT 60.899 55.000 5.05 0.00 0.00 2.85
201 203 0.961019 GCAGGTGGTTCTTGCAATGA 59.039 50.000 0.00 0.00 46.35 2.57
239 242 4.226846 AGAGGAGGAGAAAGAAATGATGCA 59.773 41.667 0.00 0.00 0.00 3.96
287 290 4.162888 TGCAAGGAATGAAGCTAGAGATGA 59.837 41.667 0.00 0.00 0.00 2.92
388 391 5.063880 GGAAAGCTAGAACAAAGGTGAAGA 58.936 41.667 0.00 0.00 0.00 2.87
421 424 2.538790 TGGAAGCCACCAGAGTTGA 58.461 52.632 0.00 0.00 34.77 3.18
434 437 3.199508 CCAGAGTTGAGATGGATCTTGGT 59.800 47.826 0.00 0.00 37.25 3.67
441 444 5.955961 TGAGATGGATCTTGGTCAATACA 57.044 39.130 0.00 0.00 37.25 2.29
446 449 5.955961 TGGATCTTGGTCAATACAGATGA 57.044 39.130 0.00 0.00 0.00 2.92
458 461 2.211250 ACAGATGAAGCAGTGGCAAT 57.789 45.000 0.00 0.00 44.61 3.56
463 466 2.857186 TGAAGCAGTGGCAATAGACA 57.143 45.000 0.00 0.00 44.61 3.41
524 527 0.818040 GGTGCCTTTCGAGGTGTTGT 60.818 55.000 0.00 0.00 0.00 3.32
538 541 2.427095 GGTGTTGTGGCTCACTTCTTTT 59.573 45.455 6.83 0.00 35.11 2.27
539 542 3.119137 GGTGTTGTGGCTCACTTCTTTTT 60.119 43.478 6.83 0.00 35.11 1.94
551 554 5.985781 TCACTTCTTTTTCAACGATGCTAC 58.014 37.500 0.00 0.00 0.00 3.58
565 568 2.902705 TGCTACGCCGGAGATTATTT 57.097 45.000 13.83 0.00 0.00 1.40
591 594 2.159179 AAACTTGTTGGAGGGCACTT 57.841 45.000 0.00 0.00 0.00 3.16
599 602 1.118965 TGGAGGGCACTTCAGTTCGA 61.119 55.000 0.00 0.00 0.00 3.71
624 627 2.303175 GAGCTCGGAGTACAGAGGATT 58.697 52.381 6.90 0.00 38.44 3.01
644 647 7.782049 AGGATTCACGTTGAGACAGATTATAA 58.218 34.615 0.00 0.00 0.00 0.98
645 648 8.258007 AGGATTCACGTTGAGACAGATTATAAA 58.742 33.333 0.00 0.00 0.00 1.40
646 649 8.879759 GGATTCACGTTGAGACAGATTATAAAA 58.120 33.333 0.00 0.00 0.00 1.52
649 652 9.483916 TTCACGTTGAGACAGATTATAAAAAGA 57.516 29.630 0.00 0.00 0.00 2.52
650 653 9.653287 TCACGTTGAGACAGATTATAAAAAGAT 57.347 29.630 0.00 0.00 0.00 2.40
668 671 3.812262 AGATCGTTGCCATGATCAATGA 58.188 40.909 19.16 18.39 44.99 2.57
679 682 3.869832 CATGATCAATGAGAGCACGAAGT 59.130 43.478 0.00 0.00 46.85 3.01
686 689 3.746045 TGAGAGCACGAAGTACCTTTT 57.254 42.857 0.00 0.00 41.61 2.27
699 702 0.886490 ACCTTTTCTGCAGCTGGACG 60.886 55.000 17.12 7.09 0.00 4.79
703 706 0.674581 TTTCTGCAGCTGGACGGATG 60.675 55.000 17.12 0.00 0.00 3.51
706 709 2.747460 GCAGCTGGACGGATGCAA 60.747 61.111 17.12 0.00 46.29 4.08
708 711 2.437359 AGCTGGACGGATGCAAGC 60.437 61.111 0.00 0.00 0.00 4.01
710 713 3.869272 CTGGACGGATGCAAGCGC 61.869 66.667 0.00 0.00 39.24 5.92
719 722 4.695993 TGCAAGCGCATCACCGGA 62.696 61.111 9.46 0.00 45.36 5.14
720 723 3.430862 GCAAGCGCATCACCGGAA 61.431 61.111 9.46 0.00 38.36 4.30
721 724 2.976840 GCAAGCGCATCACCGGAAA 61.977 57.895 9.46 0.00 38.36 3.13
722 725 1.802636 CAAGCGCATCACCGGAAAT 59.197 52.632 9.46 0.00 0.00 2.17
724 727 0.887933 AAGCGCATCACCGGAAATTT 59.112 45.000 9.46 0.00 0.00 1.82
725 728 0.887933 AGCGCATCACCGGAAATTTT 59.112 45.000 9.46 0.00 0.00 1.82
726 729 0.991344 GCGCATCACCGGAAATTTTG 59.009 50.000 9.46 0.00 0.00 2.44
727 730 1.402194 GCGCATCACCGGAAATTTTGA 60.402 47.619 9.46 0.00 0.00 2.69
728 731 2.924454 GCGCATCACCGGAAATTTTGAA 60.924 45.455 9.46 0.00 0.00 2.69
730 733 3.925913 CGCATCACCGGAAATTTTGAAAT 59.074 39.130 9.46 0.00 0.00 2.17
731 734 5.098893 CGCATCACCGGAAATTTTGAAATA 58.901 37.500 9.46 0.00 0.00 1.40
732 735 5.574830 CGCATCACCGGAAATTTTGAAATAA 59.425 36.000 9.46 0.00 0.00 1.40
735 738 8.450180 GCATCACCGGAAATTTTGAAATAAATT 58.550 29.630 9.46 0.00 38.90 1.82
736 739 9.971744 CATCACCGGAAATTTTGAAATAAATTC 57.028 29.630 9.46 0.00 36.87 2.17
737 740 9.717942 ATCACCGGAAATTTTGAAATAAATTCA 57.282 25.926 9.46 0.00 46.22 2.57
771 774 5.779529 AGCATCAAAAGTTGAATCACTGT 57.220 34.783 0.00 0.00 43.95 3.55
773 776 4.919754 GCATCAAAAGTTGAATCACTGTCC 59.080 41.667 0.00 0.00 43.95 4.02
776 779 7.575532 GCATCAAAAGTTGAATCACTGTCCATA 60.576 37.037 0.00 0.00 43.95 2.74
777 780 8.464404 CATCAAAAGTTGAATCACTGTCCATAT 58.536 33.333 0.00 0.00 43.95 1.78
778 781 7.819644 TCAAAAGTTGAATCACTGTCCATATG 58.180 34.615 0.00 0.00 36.59 1.78
779 782 7.448161 TCAAAAGTTGAATCACTGTCCATATGT 59.552 33.333 1.24 0.00 36.59 2.29
780 783 8.729756 CAAAAGTTGAATCACTGTCCATATGTA 58.270 33.333 1.24 0.00 0.00 2.29
781 784 8.862325 AAAGTTGAATCACTGTCCATATGTAA 57.138 30.769 1.24 0.00 0.00 2.41
782 785 7.849804 AGTTGAATCACTGTCCATATGTAAC 57.150 36.000 1.24 0.40 0.00 2.50
784 787 6.306643 TGAATCACTGTCCATATGTAACCA 57.693 37.500 1.24 0.00 0.00 3.67
789 963 4.870426 CACTGTCCATATGTAACCACACTC 59.130 45.833 1.24 0.00 37.54 3.51
796 970 5.885352 CCATATGTAACCACACTCATGGAAA 59.115 40.000 1.24 0.00 43.02 3.13
1080 1284 4.722700 GTGTGGGTGATGGGCGCT 62.723 66.667 7.64 0.00 0.00 5.92
1191 1395 3.567579 CTTCCGCAGCCCCAAGGAA 62.568 63.158 0.00 0.00 40.12 3.36
1830 2037 2.034221 GCCAAGGAGGTCGGCTTT 59.966 61.111 0.00 0.00 42.78 3.51
2383 2591 2.360852 GGACTCGTCCCTCACCGA 60.361 66.667 4.73 0.00 43.94 4.69
2451 2690 2.158914 ACTGCAGTGATTGTGTCTGACA 60.159 45.455 20.97 6.36 0.00 3.58
2494 2733 2.517402 TGGTTTGACACGGTGGGC 60.517 61.111 13.48 4.75 0.00 5.36
2567 2813 3.034878 CGAGATCGGATCTGCGGT 58.965 61.111 24.43 0.55 40.38 5.68
2568 2814 1.360551 CGAGATCGGATCTGCGGTT 59.639 57.895 24.43 0.00 40.38 4.44
2569 2815 0.936764 CGAGATCGGATCTGCGGTTG 60.937 60.000 24.43 1.41 40.38 3.77
2570 2816 0.385751 GAGATCGGATCTGCGGTTGA 59.614 55.000 24.43 0.00 40.38 3.18
2571 2817 0.387202 AGATCGGATCTGCGGTTGAG 59.613 55.000 19.31 0.00 38.44 3.02
2572 2818 0.103208 GATCGGATCTGCGGTTGAGT 59.897 55.000 10.73 0.00 0.00 3.41
2573 2819 0.537188 ATCGGATCTGCGGTTGAGTT 59.463 50.000 0.00 0.00 0.00 3.01
2574 2820 1.179152 TCGGATCTGCGGTTGAGTTA 58.821 50.000 0.00 0.00 0.00 2.24
2575 2821 1.135199 TCGGATCTGCGGTTGAGTTAC 60.135 52.381 0.00 0.00 0.00 2.50
2576 2822 1.135083 CGGATCTGCGGTTGAGTTACT 60.135 52.381 0.00 0.00 0.00 2.24
2577 2823 2.674177 CGGATCTGCGGTTGAGTTACTT 60.674 50.000 0.00 0.00 0.00 2.24
2578 2824 3.428452 CGGATCTGCGGTTGAGTTACTTA 60.428 47.826 0.00 0.00 0.00 2.24
2579 2825 3.864003 GGATCTGCGGTTGAGTTACTTAC 59.136 47.826 0.00 0.00 0.00 2.34
2580 2826 4.381718 GGATCTGCGGTTGAGTTACTTACT 60.382 45.833 0.00 0.00 40.71 2.24
2581 2827 5.163581 GGATCTGCGGTTGAGTTACTTACTA 60.164 44.000 0.00 0.00 37.17 1.82
2582 2828 5.306532 TCTGCGGTTGAGTTACTTACTAG 57.693 43.478 0.00 0.00 37.17 2.57
2583 2829 4.157289 TCTGCGGTTGAGTTACTTACTAGG 59.843 45.833 0.00 0.00 37.17 3.02
2584 2830 3.828451 TGCGGTTGAGTTACTTACTAGGT 59.172 43.478 0.00 0.00 37.17 3.08
2585 2831 4.082571 TGCGGTTGAGTTACTTACTAGGTC 60.083 45.833 0.00 0.00 37.17 3.85
2586 2832 4.656041 CGGTTGAGTTACTTACTAGGTCG 58.344 47.826 0.00 0.00 37.17 4.79
2587 2833 4.437930 CGGTTGAGTTACTTACTAGGTCGG 60.438 50.000 0.00 0.00 37.17 4.79
2588 2834 4.702131 GGTTGAGTTACTTACTAGGTCGGA 59.298 45.833 0.00 0.00 37.17 4.55
2589 2835 5.359292 GGTTGAGTTACTTACTAGGTCGGAT 59.641 44.000 0.00 0.00 37.17 4.18
2590 2836 6.459435 GGTTGAGTTACTTACTAGGTCGGATC 60.459 46.154 0.00 0.00 37.17 3.36
2591 2837 5.999044 TGAGTTACTTACTAGGTCGGATCT 58.001 41.667 0.00 0.00 37.17 2.75
2592 2838 5.821470 TGAGTTACTTACTAGGTCGGATCTG 59.179 44.000 0.00 0.00 37.17 2.90
2633 2879 3.181774 GGTGTACTATATTTCTGCGTGCG 59.818 47.826 0.00 0.00 0.00 5.34
2673 2919 0.616964 TGCCTCTGAGATCTGGCTGT 60.617 55.000 19.40 0.00 45.11 4.40
2674 2920 1.342374 TGCCTCTGAGATCTGGCTGTA 60.342 52.381 19.40 0.80 45.11 2.74
2675 2921 1.759445 GCCTCTGAGATCTGGCTGTAA 59.241 52.381 13.27 0.00 41.92 2.41
2676 2922 2.224018 GCCTCTGAGATCTGGCTGTAAG 60.224 54.545 13.27 0.00 41.92 2.34
2690 2936 3.198409 CTGTAAGCCTGTGCCATATCA 57.802 47.619 0.00 0.00 38.69 2.15
2691 2937 3.748083 CTGTAAGCCTGTGCCATATCAT 58.252 45.455 0.00 0.00 38.69 2.45
2692 2938 3.743521 TGTAAGCCTGTGCCATATCATC 58.256 45.455 0.00 0.00 38.69 2.92
2693 2939 3.136260 TGTAAGCCTGTGCCATATCATCA 59.864 43.478 0.00 0.00 38.69 3.07
2694 2940 3.301794 AAGCCTGTGCCATATCATCAA 57.698 42.857 0.00 0.00 38.69 2.57
2695 2941 3.301794 AGCCTGTGCCATATCATCAAA 57.698 42.857 0.00 0.00 38.69 2.69
2696 2942 3.220110 AGCCTGTGCCATATCATCAAAG 58.780 45.455 0.00 0.00 38.69 2.77
2697 2943 3.117776 AGCCTGTGCCATATCATCAAAGA 60.118 43.478 0.00 0.00 38.69 2.52
2698 2944 3.252701 GCCTGTGCCATATCATCAAAGAG 59.747 47.826 0.00 0.00 0.00 2.85
2699 2945 3.252701 CCTGTGCCATATCATCAAAGAGC 59.747 47.826 0.00 0.00 0.00 4.09
2700 2946 3.216800 TGTGCCATATCATCAAAGAGCC 58.783 45.455 0.00 0.00 0.00 4.70
2701 2947 3.216800 GTGCCATATCATCAAAGAGCCA 58.783 45.455 0.00 0.00 0.00 4.75
2702 2948 3.252701 GTGCCATATCATCAAAGAGCCAG 59.747 47.826 0.00 0.00 0.00 4.85
2703 2949 2.228343 GCCATATCATCAAAGAGCCAGC 59.772 50.000 0.00 0.00 0.00 4.85
2704 2950 3.752665 CCATATCATCAAAGAGCCAGCT 58.247 45.455 0.00 0.00 0.00 4.24
2705 2951 4.142790 CCATATCATCAAAGAGCCAGCTT 58.857 43.478 0.00 0.00 0.00 3.74
2706 2952 5.311265 CCATATCATCAAAGAGCCAGCTTA 58.689 41.667 0.00 0.00 0.00 3.09
2707 2953 5.766670 CCATATCATCAAAGAGCCAGCTTAA 59.233 40.000 0.00 0.00 0.00 1.85
2708 2954 6.263842 CCATATCATCAAAGAGCCAGCTTAAA 59.736 38.462 0.00 0.00 0.00 1.52
2709 2955 5.831702 ATCATCAAAGAGCCAGCTTAAAG 57.168 39.130 0.00 0.00 0.00 1.85
2710 2956 3.441572 TCATCAAAGAGCCAGCTTAAAGC 59.558 43.478 0.00 0.00 42.84 3.51
2711 2957 2.162681 TCAAAGAGCCAGCTTAAAGCC 58.837 47.619 0.00 0.00 43.77 4.35
2712 2958 1.135575 CAAAGAGCCAGCTTAAAGCCG 60.136 52.381 0.00 0.00 43.77 5.52
2713 2959 0.324943 AAGAGCCAGCTTAAAGCCGA 59.675 50.000 0.00 0.00 43.77 5.54
2714 2960 0.107945 AGAGCCAGCTTAAAGCCGAG 60.108 55.000 0.00 0.00 43.77 4.63
2715 2961 1.710103 GAGCCAGCTTAAAGCCGAGC 61.710 60.000 0.00 0.00 43.77 5.03
2716 2962 2.765356 GCCAGCTTAAAGCCGAGCC 61.765 63.158 0.00 0.00 43.77 4.70
2717 2963 1.377202 CCAGCTTAAAGCCGAGCCA 60.377 57.895 0.00 0.00 43.77 4.75
2718 2964 0.749454 CCAGCTTAAAGCCGAGCCAT 60.749 55.000 0.00 0.00 43.77 4.40
2719 2965 1.475034 CCAGCTTAAAGCCGAGCCATA 60.475 52.381 0.00 0.00 43.77 2.74
2720 2966 2.498167 CAGCTTAAAGCCGAGCCATAT 58.502 47.619 0.00 0.00 43.77 1.78
2721 2967 2.880890 CAGCTTAAAGCCGAGCCATATT 59.119 45.455 0.00 0.00 43.77 1.28
2722 2968 4.065088 CAGCTTAAAGCCGAGCCATATTA 58.935 43.478 0.00 0.00 43.77 0.98
2723 2969 4.515191 CAGCTTAAAGCCGAGCCATATTAA 59.485 41.667 0.00 0.00 43.77 1.40
2724 2970 5.182001 CAGCTTAAAGCCGAGCCATATTAAT 59.818 40.000 0.00 0.00 43.77 1.40
2725 2971 6.371548 CAGCTTAAAGCCGAGCCATATTAATA 59.628 38.462 0.00 0.00 43.77 0.98
2726 2972 6.940298 AGCTTAAAGCCGAGCCATATTAATAA 59.060 34.615 0.00 0.00 43.77 1.40
2727 2973 7.119846 AGCTTAAAGCCGAGCCATATTAATAAG 59.880 37.037 0.00 0.00 43.77 1.73
2728 2974 5.629079 AAAGCCGAGCCATATTAATAAGC 57.371 39.130 11.18 11.18 0.00 3.09
2729 2975 4.559862 AGCCGAGCCATATTAATAAGCT 57.440 40.909 18.39 18.39 36.25 3.74
2730 2976 5.677319 AGCCGAGCCATATTAATAAGCTA 57.323 39.130 18.37 0.00 32.97 3.32
2731 2977 5.665459 AGCCGAGCCATATTAATAAGCTAG 58.335 41.667 18.37 17.68 32.97 3.42
2732 2978 4.271291 GCCGAGCCATATTAATAAGCTAGC 59.729 45.833 18.37 18.76 32.97 3.42
2733 2979 5.665459 CCGAGCCATATTAATAAGCTAGCT 58.335 41.667 12.68 12.68 32.97 3.32
2734 2980 6.683110 GCCGAGCCATATTAATAAGCTAGCTA 60.683 42.308 19.70 7.01 32.97 3.32
2735 2981 7.437748 CCGAGCCATATTAATAAGCTAGCTAT 58.562 38.462 19.70 9.98 32.97 2.97
2736 2982 8.577296 CCGAGCCATATTAATAAGCTAGCTATA 58.423 37.037 19.70 12.02 32.97 1.31
2737 2983 9.400638 CGAGCCATATTAATAAGCTAGCTATAC 57.599 37.037 19.70 1.95 32.97 1.47
2738 2984 9.699703 GAGCCATATTAATAAGCTAGCTATACC 57.300 37.037 19.70 4.47 32.97 2.73
2739 2985 8.652290 AGCCATATTAATAAGCTAGCTATACCC 58.348 37.037 19.70 4.15 30.46 3.69
2740 2986 8.652290 GCCATATTAATAAGCTAGCTATACCCT 58.348 37.037 19.70 3.28 0.00 4.34
2741 2987 9.988815 CCATATTAATAAGCTAGCTATACCCTG 57.011 37.037 19.70 9.06 0.00 4.45
2742 2988 9.988815 CATATTAATAAGCTAGCTATACCCTGG 57.011 37.037 19.70 0.28 0.00 4.45
2743 2989 4.828072 AATAAGCTAGCTATACCCTGGC 57.172 45.455 19.70 0.00 37.10 4.85
2745 2991 1.638529 AGCTAGCTATACCCTGGCTG 58.361 55.000 17.69 0.00 44.11 4.85
2746 2992 1.133009 AGCTAGCTATACCCTGGCTGT 60.133 52.381 17.69 0.00 44.11 4.40
2747 2993 1.694696 GCTAGCTATACCCTGGCTGTT 59.305 52.381 7.70 0.00 42.42 3.16
2748 2994 2.897969 GCTAGCTATACCCTGGCTGTTA 59.102 50.000 7.70 0.00 42.42 2.41
2749 2995 3.323979 GCTAGCTATACCCTGGCTGTTAA 59.676 47.826 7.70 0.00 42.42 2.01
2750 2996 4.561734 GCTAGCTATACCCTGGCTGTTAAG 60.562 50.000 7.70 0.00 42.42 1.85
2751 2997 3.385115 AGCTATACCCTGGCTGTTAAGT 58.615 45.455 0.00 0.00 40.69 2.24
2752 2998 3.134804 AGCTATACCCTGGCTGTTAAGTG 59.865 47.826 0.00 0.00 40.69 3.16
2753 2999 3.744530 GCTATACCCTGGCTGTTAAGTGG 60.745 52.174 0.00 0.00 0.00 4.00
2754 3000 0.988832 TACCCTGGCTGTTAAGTGGG 59.011 55.000 0.00 0.00 36.93 4.61
2755 3001 1.678970 CCCTGGCTGTTAAGTGGGC 60.679 63.158 0.00 0.00 0.00 5.36
2756 3002 1.380302 CCTGGCTGTTAAGTGGGCT 59.620 57.895 0.00 0.00 0.00 5.19
2757 3003 0.251341 CCTGGCTGTTAAGTGGGCTT 60.251 55.000 0.00 0.00 38.66 4.35
2758 3004 1.168714 CTGGCTGTTAAGTGGGCTTC 58.831 55.000 0.00 0.00 36.22 3.86
2759 3005 0.476338 TGGCTGTTAAGTGGGCTTCA 59.524 50.000 0.00 0.00 36.22 3.02
2760 3006 1.075374 TGGCTGTTAAGTGGGCTTCAT 59.925 47.619 0.00 0.00 36.22 2.57
2761 3007 2.171003 GGCTGTTAAGTGGGCTTCATT 58.829 47.619 0.00 0.00 36.22 2.57
2762 3008 3.245087 TGGCTGTTAAGTGGGCTTCATTA 60.245 43.478 0.00 0.00 36.22 1.90
2763 3009 3.761752 GGCTGTTAAGTGGGCTTCATTAA 59.238 43.478 0.00 0.00 36.22 1.40
2764 3010 4.219725 GGCTGTTAAGTGGGCTTCATTAAA 59.780 41.667 0.00 0.00 36.22 1.52
2765 3011 5.402398 GCTGTTAAGTGGGCTTCATTAAAG 58.598 41.667 0.00 0.00 36.22 1.85
2801 3047 9.969001 ATTAGTTCTTTAAGCTGGGTATAAACA 57.031 29.630 0.00 0.00 0.00 2.83
2802 3048 7.683437 AGTTCTTTAAGCTGGGTATAAACAC 57.317 36.000 0.00 0.00 0.00 3.32
2803 3049 6.370718 AGTTCTTTAAGCTGGGTATAAACACG 59.629 38.462 0.00 0.00 0.00 4.49
2804 3050 6.040209 TCTTTAAGCTGGGTATAAACACGA 57.960 37.500 0.00 0.00 0.00 4.35
2805 3051 6.646267 TCTTTAAGCTGGGTATAAACACGAT 58.354 36.000 0.00 0.00 0.00 3.73
2806 3052 7.107542 TCTTTAAGCTGGGTATAAACACGATT 58.892 34.615 0.00 0.00 0.00 3.34
2807 3053 6.671614 TTAAGCTGGGTATAAACACGATTG 57.328 37.500 0.00 0.00 0.00 2.67
2808 3054 3.541632 AGCTGGGTATAAACACGATTGG 58.458 45.455 0.00 0.00 0.00 3.16
2809 3055 2.616842 GCTGGGTATAAACACGATTGGG 59.383 50.000 0.00 0.00 0.00 4.12
2810 3056 3.881220 CTGGGTATAAACACGATTGGGT 58.119 45.455 0.00 0.00 0.00 4.51
2811 3057 3.611970 TGGGTATAAACACGATTGGGTG 58.388 45.455 0.00 0.00 43.54 4.61
2812 3058 2.946990 GGGTATAAACACGATTGGGTGG 59.053 50.000 0.00 0.00 42.23 4.61
2813 3059 3.370739 GGGTATAAACACGATTGGGTGGA 60.371 47.826 0.00 0.00 42.23 4.02
2814 3060 4.263435 GGTATAAACACGATTGGGTGGAA 58.737 43.478 0.00 0.00 42.23 3.53
2815 3061 4.885325 GGTATAAACACGATTGGGTGGAAT 59.115 41.667 0.00 0.00 42.23 3.01
2816 3062 5.008316 GGTATAAACACGATTGGGTGGAATC 59.992 44.000 0.00 0.00 42.23 2.52
2817 3063 2.879103 AACACGATTGGGTGGAATCT 57.121 45.000 0.00 0.00 42.23 2.40
2818 3064 2.403252 ACACGATTGGGTGGAATCTC 57.597 50.000 0.00 0.00 42.23 2.75
2819 3065 1.065418 ACACGATTGGGTGGAATCTCC 60.065 52.381 0.00 0.00 42.23 3.71
2820 3066 1.210478 CACGATTGGGTGGAATCTCCT 59.790 52.381 0.00 0.00 37.46 3.69
2821 3067 2.434336 CACGATTGGGTGGAATCTCCTA 59.566 50.000 0.00 0.00 37.46 2.94
2822 3068 2.700897 ACGATTGGGTGGAATCTCCTAG 59.299 50.000 0.00 0.00 37.46 3.02
2823 3069 2.548920 CGATTGGGTGGAATCTCCTAGC 60.549 54.545 0.00 0.00 37.46 3.42
2824 3070 0.830648 TTGGGTGGAATCTCCTAGCG 59.169 55.000 0.00 0.00 37.46 4.26
2825 3071 0.325296 TGGGTGGAATCTCCTAGCGT 60.325 55.000 0.00 0.00 37.46 5.07
2826 3072 0.831307 GGGTGGAATCTCCTAGCGTT 59.169 55.000 0.00 0.00 37.46 4.84
2827 3073 1.473434 GGGTGGAATCTCCTAGCGTTG 60.473 57.143 0.00 0.00 37.46 4.10
2828 3074 1.473434 GGTGGAATCTCCTAGCGTTGG 60.473 57.143 0.00 0.00 37.46 3.77
2829 3075 0.178068 TGGAATCTCCTAGCGTTGGC 59.822 55.000 0.00 0.00 37.46 4.52
2830 3076 0.533085 GGAATCTCCTAGCGTTGGCC 60.533 60.000 0.00 0.00 34.68 5.36
2831 3077 0.466124 GAATCTCCTAGCGTTGGCCT 59.534 55.000 3.32 0.00 41.24 5.19
2832 3078 1.687123 GAATCTCCTAGCGTTGGCCTA 59.313 52.381 3.32 0.00 41.24 3.93
2833 3079 1.333177 ATCTCCTAGCGTTGGCCTAG 58.667 55.000 3.32 0.00 41.24 3.02
2834 3080 1.068250 CTCCTAGCGTTGGCCTAGC 59.932 63.158 3.32 6.95 41.24 3.42
2835 3081 2.279517 CCTAGCGTTGGCCTAGCG 60.280 66.667 3.32 7.07 41.24 4.26
2855 3101 2.667536 AGCGGTGTGAGCTGCAAG 60.668 61.111 1.02 0.00 44.22 4.01
2869 3115 3.630204 CAAGCGTGCTATAGCCGG 58.370 61.111 26.29 18.13 41.18 6.13
2870 3116 1.956170 CAAGCGTGCTATAGCCGGG 60.956 63.158 26.29 16.16 41.18 5.73
2871 3117 2.131709 AAGCGTGCTATAGCCGGGA 61.132 57.895 26.29 7.82 41.18 5.14
2872 3118 2.049063 GCGTGCTATAGCCGGGAG 60.049 66.667 26.29 14.24 41.18 4.30
2873 3119 2.561956 GCGTGCTATAGCCGGGAGA 61.562 63.158 26.29 6.86 41.18 3.71
2874 3120 1.286260 CGTGCTATAGCCGGGAGAC 59.714 63.158 21.84 10.94 41.18 3.36
2875 3121 1.173444 CGTGCTATAGCCGGGAGACT 61.173 60.000 21.84 0.00 41.18 3.24
2876 3122 0.315568 GTGCTATAGCCGGGAGACTG 59.684 60.000 21.84 0.00 41.18 3.51
2877 3123 1.290639 GCTATAGCCGGGAGACTGC 59.709 63.158 14.13 0.00 34.42 4.40
2878 3124 1.464376 GCTATAGCCGGGAGACTGCA 61.464 60.000 14.13 0.00 34.42 4.41
2879 3125 0.600557 CTATAGCCGGGAGACTGCAG 59.399 60.000 13.48 13.48 34.42 4.41
2880 3126 0.827925 TATAGCCGGGAGACTGCAGG 60.828 60.000 19.93 8.81 34.42 4.85
2881 3127 2.589610 ATAGCCGGGAGACTGCAGGA 62.590 60.000 19.93 0.00 34.42 3.86
2882 3128 4.154347 GCCGGGAGACTGCAGGAG 62.154 72.222 19.93 2.18 34.42 3.69
2883 3129 2.363018 CCGGGAGACTGCAGGAGA 60.363 66.667 19.93 0.00 34.42 3.71
2884 3130 2.422231 CCGGGAGACTGCAGGAGAG 61.422 68.421 19.93 4.01 34.42 3.20
2885 3131 2.899505 GGGAGACTGCAGGAGAGC 59.100 66.667 19.93 2.23 0.00 4.09
2886 3132 2.730524 GGGAGACTGCAGGAGAGCC 61.731 68.421 19.93 11.31 0.00 4.70
2887 3133 2.730524 GGAGACTGCAGGAGAGCCC 61.731 68.421 19.93 6.39 33.31 5.19
2888 3134 3.073735 AGACTGCAGGAGAGCCCG 61.074 66.667 19.93 0.00 40.87 6.13
2889 3135 4.828925 GACTGCAGGAGAGCCCGC 62.829 72.222 19.93 0.00 40.87 6.13
2891 3137 4.527583 CTGCAGGAGAGCCCGCTC 62.528 72.222 5.57 8.70 43.03 5.03
2897 3143 3.225235 GAGAGCCCGCTCCATTCT 58.775 61.111 13.02 0.00 43.70 2.40
2898 3144 1.068921 GAGAGCCCGCTCCATTCTC 59.931 63.158 13.02 0.43 43.70 2.87
2899 3145 1.382420 AGAGCCCGCTCCATTCTCT 60.382 57.895 13.02 0.00 43.70 3.10
2900 3146 0.980231 AGAGCCCGCTCCATTCTCTT 60.980 55.000 13.02 0.00 43.70 2.85
2901 3147 0.107459 GAGCCCGCTCCATTCTCTTT 60.107 55.000 5.34 0.00 37.11 2.52
2902 3148 0.107459 AGCCCGCTCCATTCTCTTTC 60.107 55.000 0.00 0.00 0.00 2.62
2903 3149 1.098129 GCCCGCTCCATTCTCTTTCC 61.098 60.000 0.00 0.00 0.00 3.13
2904 3150 0.543749 CCCGCTCCATTCTCTTTCCT 59.456 55.000 0.00 0.00 0.00 3.36
2905 3151 1.661341 CCGCTCCATTCTCTTTCCTG 58.339 55.000 0.00 0.00 0.00 3.86
2906 3152 1.012841 CGCTCCATTCTCTTTCCTGC 58.987 55.000 0.00 0.00 0.00 4.85
2907 3153 1.406614 CGCTCCATTCTCTTTCCTGCT 60.407 52.381 0.00 0.00 0.00 4.24
2908 3154 2.720915 GCTCCATTCTCTTTCCTGCTT 58.279 47.619 0.00 0.00 0.00 3.91
2909 3155 3.087781 GCTCCATTCTCTTTCCTGCTTT 58.912 45.455 0.00 0.00 0.00 3.51
2910 3156 3.128415 GCTCCATTCTCTTTCCTGCTTTC 59.872 47.826 0.00 0.00 0.00 2.62
2911 3157 4.587891 CTCCATTCTCTTTCCTGCTTTCT 58.412 43.478 0.00 0.00 0.00 2.52
2912 3158 4.583871 TCCATTCTCTTTCCTGCTTTCTC 58.416 43.478 0.00 0.00 0.00 2.87
2913 3159 4.288105 TCCATTCTCTTTCCTGCTTTCTCT 59.712 41.667 0.00 0.00 0.00 3.10
2914 3160 4.635324 CCATTCTCTTTCCTGCTTTCTCTC 59.365 45.833 0.00 0.00 0.00 3.20
2915 3161 5.490159 CATTCTCTTTCCTGCTTTCTCTCT 58.510 41.667 0.00 0.00 0.00 3.10
2916 3162 4.799564 TCTCTTTCCTGCTTTCTCTCTC 57.200 45.455 0.00 0.00 0.00 3.20
2917 3163 4.415596 TCTCTTTCCTGCTTTCTCTCTCT 58.584 43.478 0.00 0.00 0.00 3.10
2918 3164 4.220382 TCTCTTTCCTGCTTTCTCTCTCTG 59.780 45.833 0.00 0.00 0.00 3.35
2919 3165 2.758736 TTCCTGCTTTCTCTCTCTGC 57.241 50.000 0.00 0.00 0.00 4.26
2920 3166 0.901124 TCCTGCTTTCTCTCTCTGCC 59.099 55.000 0.00 0.00 0.00 4.85
2921 3167 0.612229 CCTGCTTTCTCTCTCTGCCA 59.388 55.000 0.00 0.00 0.00 4.92
2922 3168 1.675415 CCTGCTTTCTCTCTCTGCCAC 60.675 57.143 0.00 0.00 0.00 5.01
2923 3169 0.037882 TGCTTTCTCTCTCTGCCACG 60.038 55.000 0.00 0.00 0.00 4.94
2924 3170 0.037790 GCTTTCTCTCTCTGCCACGT 60.038 55.000 0.00 0.00 0.00 4.49
2925 3171 1.202582 GCTTTCTCTCTCTGCCACGTA 59.797 52.381 0.00 0.00 0.00 3.57
2926 3172 2.733858 GCTTTCTCTCTCTGCCACGTAG 60.734 54.545 0.00 0.00 0.00 3.51
2927 3173 1.464734 TTCTCTCTCTGCCACGTAGG 58.535 55.000 0.00 0.00 41.84 3.18
2928 3174 0.618981 TCTCTCTCTGCCACGTAGGA 59.381 55.000 8.04 0.00 41.22 2.94
2929 3175 1.213182 TCTCTCTCTGCCACGTAGGAT 59.787 52.381 8.04 0.00 41.22 3.24
2930 3176 2.028130 CTCTCTCTGCCACGTAGGATT 58.972 52.381 8.04 0.00 41.22 3.01
2931 3177 2.428890 CTCTCTCTGCCACGTAGGATTT 59.571 50.000 8.04 0.00 41.22 2.17
2932 3178 2.166459 TCTCTCTGCCACGTAGGATTTG 59.834 50.000 8.04 0.00 41.22 2.32
2933 3179 1.207089 TCTCTGCCACGTAGGATTTGG 59.793 52.381 8.04 0.00 41.22 3.28
2934 3180 1.207089 CTCTGCCACGTAGGATTTGGA 59.793 52.381 8.04 0.00 41.22 3.53
2935 3181 1.837439 TCTGCCACGTAGGATTTGGAT 59.163 47.619 8.04 0.00 41.22 3.41
2936 3182 1.942657 CTGCCACGTAGGATTTGGATG 59.057 52.381 8.04 0.00 41.22 3.51
2937 3183 1.557371 TGCCACGTAGGATTTGGATGA 59.443 47.619 8.04 0.00 41.22 2.92
2938 3184 2.213499 GCCACGTAGGATTTGGATGAG 58.787 52.381 8.04 0.00 41.22 2.90
2939 3185 2.213499 CCACGTAGGATTTGGATGAGC 58.787 52.381 0.00 0.00 41.22 4.26
2940 3186 2.158900 CCACGTAGGATTTGGATGAGCT 60.159 50.000 0.00 0.00 41.22 4.09
2941 3187 2.868583 CACGTAGGATTTGGATGAGCTG 59.131 50.000 0.00 0.00 0.00 4.24
2942 3188 2.158900 ACGTAGGATTTGGATGAGCTGG 60.159 50.000 0.00 0.00 0.00 4.85
2943 3189 2.225467 GTAGGATTTGGATGAGCTGGC 58.775 52.381 0.00 0.00 0.00 4.85
2944 3190 0.627451 AGGATTTGGATGAGCTGGCA 59.373 50.000 0.00 0.00 0.00 4.92
2945 3191 1.006281 AGGATTTGGATGAGCTGGCAA 59.994 47.619 0.00 0.00 0.00 4.52
2946 3192 1.826720 GGATTTGGATGAGCTGGCAAA 59.173 47.619 0.00 0.00 0.00 3.68
2947 3193 2.433239 GGATTTGGATGAGCTGGCAAAT 59.567 45.455 0.00 0.00 0.00 2.32
2948 3194 3.454375 GATTTGGATGAGCTGGCAAATG 58.546 45.455 0.00 0.00 0.00 2.32
2949 3195 0.533491 TTGGATGAGCTGGCAAATGC 59.467 50.000 0.00 0.00 41.14 3.56
2950 3196 0.323999 TGGATGAGCTGGCAAATGCT 60.324 50.000 5.25 0.00 42.82 3.79
2951 3197 1.064537 TGGATGAGCTGGCAAATGCTA 60.065 47.619 5.25 0.00 39.91 3.49
2952 3198 2.236766 GGATGAGCTGGCAAATGCTAT 58.763 47.619 5.25 0.00 39.91 2.97
2953 3199 3.181441 TGGATGAGCTGGCAAATGCTATA 60.181 43.478 5.25 0.00 39.91 1.31
2954 3200 3.439476 GGATGAGCTGGCAAATGCTATAG 59.561 47.826 5.25 0.00 39.91 1.31
2955 3201 2.224606 TGAGCTGGCAAATGCTATAGC 58.775 47.619 18.18 18.18 39.91 2.97
2960 3206 1.613836 GGCAAATGCTATAGCCTGCT 58.386 50.000 28.31 10.33 43.70 4.24
2961 3207 1.268899 GGCAAATGCTATAGCCTGCTG 59.731 52.381 28.31 19.20 43.70 4.41
2962 3208 2.224606 GCAAATGCTATAGCCTGCTGA 58.775 47.619 25.07 8.89 41.18 4.26
2963 3209 2.031333 GCAAATGCTATAGCCTGCTGAC 60.031 50.000 25.07 8.28 41.18 3.51
2964 3210 3.474600 CAAATGCTATAGCCTGCTGACT 58.525 45.455 21.84 0.00 41.18 3.41
2965 3211 3.853355 AATGCTATAGCCTGCTGACTT 57.147 42.857 21.84 0.65 41.18 3.01
2966 3212 4.963318 AATGCTATAGCCTGCTGACTTA 57.037 40.909 21.84 0.00 41.18 2.24
2967 3213 5.495926 AATGCTATAGCCTGCTGACTTAT 57.504 39.130 21.84 1.80 41.18 1.73
2968 3214 4.963318 TGCTATAGCCTGCTGACTTATT 57.037 40.909 21.84 0.00 41.18 1.40
2969 3215 6.611613 ATGCTATAGCCTGCTGACTTATTA 57.388 37.500 21.84 0.00 41.18 0.98
2970 3216 6.611613 TGCTATAGCCTGCTGACTTATTAT 57.388 37.500 21.84 0.00 41.18 1.28
2971 3217 7.718334 TGCTATAGCCTGCTGACTTATTATA 57.282 36.000 21.84 0.00 41.18 0.98
2972 3218 7.776107 TGCTATAGCCTGCTGACTTATTATAG 58.224 38.462 21.84 0.05 41.18 1.31
2973 3219 7.615757 TGCTATAGCCTGCTGACTTATTATAGA 59.384 37.037 21.84 0.00 41.18 1.98
2974 3220 8.134895 GCTATAGCCTGCTGACTTATTATAGAG 58.865 40.741 14.13 0.00 34.31 2.43
2975 3221 5.736951 AGCCTGCTGACTTATTATAGAGG 57.263 43.478 0.00 0.00 0.00 3.69
2976 3222 5.151454 AGCCTGCTGACTTATTATAGAGGT 58.849 41.667 0.00 0.00 0.00 3.85
2977 3223 6.315714 AGCCTGCTGACTTATTATAGAGGTA 58.684 40.000 0.00 0.00 0.00 3.08
2978 3224 6.782988 AGCCTGCTGACTTATTATAGAGGTAA 59.217 38.462 0.00 0.00 0.00 2.85
2979 3225 7.290248 AGCCTGCTGACTTATTATAGAGGTAAA 59.710 37.037 0.00 0.00 0.00 2.01
2980 3226 8.097662 GCCTGCTGACTTATTATAGAGGTAAAT 58.902 37.037 0.00 0.00 0.00 1.40
2997 3243 9.939424 AGAGGTAAATACATAGGTCTTAGAACT 57.061 33.333 4.77 4.77 32.68 3.01
3000 3246 9.043079 GGTAAATACATAGGTCTTAGAACTTGC 57.957 37.037 4.67 0.00 29.72 4.01
3001 3247 9.595823 GTAAATACATAGGTCTTAGAACTTGCA 57.404 33.333 4.67 0.00 29.72 4.08
3002 3248 8.494016 AAATACATAGGTCTTAGAACTTGCAC 57.506 34.615 4.67 0.00 29.72 4.57
3003 3249 4.495422 ACATAGGTCTTAGAACTTGCACG 58.505 43.478 4.67 0.00 29.72 5.34
3004 3250 1.797025 AGGTCTTAGAACTTGCACGC 58.203 50.000 0.00 0.00 0.00 5.34
3005 3251 0.438830 GGTCTTAGAACTTGCACGCG 59.561 55.000 3.53 3.53 0.00 6.01
3006 3252 0.438830 GTCTTAGAACTTGCACGCGG 59.561 55.000 12.47 0.00 0.00 6.46
3007 3253 1.132640 CTTAGAACTTGCACGCGGC 59.867 57.895 12.47 12.14 45.13 6.53
3016 3262 3.788766 GCACGCGGCGATCACTTT 61.789 61.111 30.94 0.52 0.00 2.66
3017 3263 2.096406 CACGCGGCGATCACTTTG 59.904 61.111 30.94 11.08 0.00 2.77
3018 3264 2.048597 ACGCGGCGATCACTTTGA 60.049 55.556 30.94 0.00 0.00 2.69
3019 3265 1.447838 ACGCGGCGATCACTTTGAT 60.448 52.632 30.94 0.00 40.34 2.57
3020 3266 1.011904 CGCGGCGATCACTTTGATG 60.012 57.895 19.16 0.00 37.20 3.07
3021 3267 1.297893 GCGGCGATCACTTTGATGC 60.298 57.895 12.98 0.00 37.20 3.91
3022 3268 1.980951 GCGGCGATCACTTTGATGCA 61.981 55.000 12.98 0.00 37.20 3.96
3023 3269 0.247814 CGGCGATCACTTTGATGCAC 60.248 55.000 0.00 0.00 37.20 4.57
3024 3270 0.804364 GGCGATCACTTTGATGCACA 59.196 50.000 0.00 0.00 37.20 4.57
3025 3271 1.199789 GGCGATCACTTTGATGCACAA 59.800 47.619 0.00 0.00 37.20 3.33
3026 3272 2.351641 GGCGATCACTTTGATGCACAAA 60.352 45.455 12.00 12.00 44.79 2.83
3041 3287 4.101112 GCACAAAGTTGCAAAATACGTG 57.899 40.909 0.00 6.80 42.49 4.49
3042 3288 3.549873 GCACAAAGTTGCAAAATACGTGT 59.450 39.130 0.00 0.00 42.49 4.49
3043 3289 4.032331 GCACAAAGTTGCAAAATACGTGTT 59.968 37.500 0.00 0.00 42.49 3.32
3044 3290 5.445275 GCACAAAGTTGCAAAATACGTGTTT 60.445 36.000 0.00 4.25 42.49 2.83
3045 3291 5.950924 CACAAAGTTGCAAAATACGTGTTTG 59.049 36.000 11.24 15.01 38.69 2.93
3046 3292 5.062809 ACAAAGTTGCAAAATACGTGTTTGG 59.937 36.000 21.15 15.67 36.64 3.28
3047 3293 3.712187 AGTTGCAAAATACGTGTTTGGG 58.288 40.909 21.15 13.94 36.64 4.12
3048 3294 2.797719 GTTGCAAAATACGTGTTTGGGG 59.202 45.455 21.15 12.02 36.64 4.96
3049 3295 2.032620 TGCAAAATACGTGTTTGGGGT 58.967 42.857 21.15 2.17 36.64 4.95
3050 3296 2.034812 TGCAAAATACGTGTTTGGGGTC 59.965 45.455 21.15 10.04 36.64 4.46
3051 3297 2.034812 GCAAAATACGTGTTTGGGGTCA 59.965 45.455 21.15 0.00 36.64 4.02
3052 3298 3.634283 CAAAATACGTGTTTGGGGTCAC 58.366 45.455 11.24 0.00 33.25 3.67
3053 3299 2.943036 AATACGTGTTTGGGGTCACT 57.057 45.000 0.00 0.00 33.07 3.41
3054 3300 4.354893 AAATACGTGTTTGGGGTCACTA 57.645 40.909 9.67 0.00 33.07 2.74
3055 3301 4.354893 AATACGTGTTTGGGGTCACTAA 57.645 40.909 0.00 0.00 33.07 2.24
3056 3302 2.713863 ACGTGTTTGGGGTCACTAAA 57.286 45.000 0.00 0.00 33.07 1.85
3057 3303 2.291365 ACGTGTTTGGGGTCACTAAAC 58.709 47.619 7.10 7.10 35.46 2.01
3058 3304 2.092807 ACGTGTTTGGGGTCACTAAACT 60.093 45.455 14.35 0.00 35.80 2.66
3059 3305 2.946990 CGTGTTTGGGGTCACTAAACTT 59.053 45.455 14.35 0.00 35.80 2.66
3060 3306 3.242936 CGTGTTTGGGGTCACTAAACTTG 60.243 47.826 14.35 4.17 35.80 3.16
3061 3307 2.691011 TGTTTGGGGTCACTAAACTTGC 59.309 45.455 14.35 0.00 35.80 4.01
3062 3308 1.600023 TTGGGGTCACTAAACTTGCG 58.400 50.000 0.00 0.00 0.00 4.85
3063 3309 0.759959 TGGGGTCACTAAACTTGCGA 59.240 50.000 0.00 0.00 0.00 5.10
3064 3310 1.270625 TGGGGTCACTAAACTTGCGAG 60.271 52.381 0.00 0.00 0.00 5.03
3065 3311 1.001633 GGGGTCACTAAACTTGCGAGA 59.998 52.381 8.31 0.00 0.00 4.04
3066 3312 2.067013 GGGTCACTAAACTTGCGAGAC 58.933 52.381 8.31 0.00 0.00 3.36
3067 3313 2.288886 GGGTCACTAAACTTGCGAGACT 60.289 50.000 8.31 0.00 0.00 3.24
3068 3314 2.731976 GGTCACTAAACTTGCGAGACTG 59.268 50.000 8.31 0.00 0.00 3.51
3069 3315 3.381949 GTCACTAAACTTGCGAGACTGT 58.618 45.455 8.31 0.00 0.00 3.55
3070 3316 3.802685 GTCACTAAACTTGCGAGACTGTT 59.197 43.478 8.31 0.00 0.00 3.16
3071 3317 4.049186 TCACTAAACTTGCGAGACTGTTC 58.951 43.478 8.31 0.00 0.00 3.18
3072 3318 3.802139 CACTAAACTTGCGAGACTGTTCA 59.198 43.478 8.31 0.00 0.00 3.18
3073 3319 4.270084 CACTAAACTTGCGAGACTGTTCAA 59.730 41.667 8.31 0.00 0.00 2.69
3074 3320 4.873827 ACTAAACTTGCGAGACTGTTCAAA 59.126 37.500 8.31 0.00 0.00 2.69
3075 3321 4.900635 AAACTTGCGAGACTGTTCAAAT 57.099 36.364 8.31 0.00 0.00 2.32
3076 3322 6.704493 ACTAAACTTGCGAGACTGTTCAAATA 59.296 34.615 8.31 0.00 0.00 1.40
3077 3323 4.992381 ACTTGCGAGACTGTTCAAATAC 57.008 40.909 8.31 0.00 0.00 1.89
3078 3324 4.377021 ACTTGCGAGACTGTTCAAATACA 58.623 39.130 8.31 0.00 0.00 2.29
3089 3335 6.942886 CTGTTCAAATACAGTCACTCTCTC 57.057 41.667 0.00 0.00 40.48 3.20
3090 3336 6.656632 TGTTCAAATACAGTCACTCTCTCT 57.343 37.500 0.00 0.00 0.00 3.10
3091 3337 6.450545 TGTTCAAATACAGTCACTCTCTCTG 58.549 40.000 0.00 0.00 35.60 3.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 2.126307 CCTCTCTGCCACACGTCG 60.126 66.667 0.00 0.00 0.00 5.12
43 44 0.249911 GTTTCCTCTCTGCCACACGT 60.250 55.000 0.00 0.00 0.00 4.49
72 73 3.523564 AGTGTGGGCATAACTAGAACCAT 59.476 43.478 0.00 0.00 0.00 3.55
73 74 2.910319 AGTGTGGGCATAACTAGAACCA 59.090 45.455 0.00 0.00 0.00 3.67
80 81 1.072266 TTGGGAGTGTGGGCATAACT 58.928 50.000 0.00 0.00 0.00 2.24
98 99 4.576463 CGCATAGCTCCTTCCAAAATAGTT 59.424 41.667 0.00 0.00 0.00 2.24
163 165 2.626266 TGCCACTCTCTTTGTTCGACTA 59.374 45.455 0.00 0.00 0.00 2.59
220 223 3.693085 TGCTGCATCATTTCTTTCTCCTC 59.307 43.478 0.00 0.00 0.00 3.71
239 242 0.403453 AAGGCCATATACCCCCTGCT 60.403 55.000 5.01 0.00 0.00 4.24
287 290 9.545105 TTTCATGTGCTTCTTGAATTATTTTGT 57.455 25.926 9.91 0.00 39.05 2.83
360 363 5.299279 CACCTTTGTTCTAGCTTTCCTTTGA 59.701 40.000 0.00 0.00 0.00 2.69
363 366 5.048846 TCACCTTTGTTCTAGCTTTCCTT 57.951 39.130 0.00 0.00 0.00 3.36
388 391 1.352352 CTTCCACCTCTCATGTTGGGT 59.648 52.381 0.00 0.00 0.00 4.51
414 417 4.099633 TGACCAAGATCCATCTCAACTCT 58.900 43.478 0.00 0.00 35.76 3.24
421 424 6.328410 TCATCTGTATTGACCAAGATCCATCT 59.672 38.462 0.00 0.00 39.22 2.90
434 437 3.273434 GCCACTGCTTCATCTGTATTGA 58.727 45.455 0.00 0.00 33.53 2.57
441 444 3.054875 TGTCTATTGCCACTGCTTCATCT 60.055 43.478 0.00 0.00 38.71 2.90
446 449 2.224867 ACCTTGTCTATTGCCACTGCTT 60.225 45.455 0.00 0.00 38.71 3.91
458 461 3.338824 TCCTCCTCCCTTTACCTTGTCTA 59.661 47.826 0.00 0.00 0.00 2.59
463 466 1.274475 CCCTCCTCCTCCCTTTACCTT 60.274 57.143 0.00 0.00 0.00 3.50
524 527 3.275143 TCGTTGAAAAAGAAGTGAGCCA 58.725 40.909 0.00 0.00 29.44 4.75
551 554 5.728351 TTTCAACTAAATAATCTCCGGCG 57.272 39.130 0.00 0.00 0.00 6.46
565 568 3.634910 GCCCTCCAACAAGTTTTCAACTA 59.365 43.478 0.00 0.00 41.91 2.24
580 583 1.118965 TCGAACTGAAGTGCCCTCCA 61.119 55.000 0.00 0.00 0.00 3.86
591 594 3.355756 AGCTCACGCTCGAACTGA 58.644 55.556 0.00 0.00 45.15 3.41
624 627 9.653287 ATCTTTTTATAATCTGTCTCAACGTGA 57.347 29.630 0.00 0.00 0.00 4.35
644 647 5.125900 TCATTGATCATGGCAACGATCTTTT 59.874 36.000 22.99 10.80 39.06 2.27
645 648 4.641541 TCATTGATCATGGCAACGATCTTT 59.358 37.500 22.99 12.56 39.06 2.52
646 649 4.201657 TCATTGATCATGGCAACGATCTT 58.798 39.130 22.99 12.81 39.06 2.40
649 652 3.812262 TCTCATTGATCATGGCAACGAT 58.188 40.909 0.00 2.70 42.51 3.73
650 653 3.200483 CTCTCATTGATCATGGCAACGA 58.800 45.455 0.00 0.00 42.51 3.85
679 682 1.608025 CGTCCAGCTGCAGAAAAGGTA 60.608 52.381 20.43 0.73 0.00 3.08
686 689 2.580815 CATCCGTCCAGCTGCAGA 59.419 61.111 20.43 0.00 0.00 4.26
703 706 2.270297 ATTTCCGGTGATGCGCTTGC 62.270 55.000 9.73 0.00 39.78 4.01
704 707 0.171007 AATTTCCGGTGATGCGCTTG 59.829 50.000 9.73 0.00 0.00 4.01
705 708 0.887933 AAATTTCCGGTGATGCGCTT 59.112 45.000 9.73 0.55 0.00 4.68
706 709 0.887933 AAAATTTCCGGTGATGCGCT 59.112 45.000 9.73 0.00 0.00 5.92
708 711 2.627863 TCAAAATTTCCGGTGATGCG 57.372 45.000 0.00 0.00 0.00 4.73
710 713 9.971744 GAATTTATTTCAAAATTTCCGGTGATG 57.028 29.630 0.00 0.00 38.77 3.07
746 749 7.889469 ACAGTGATTCAACTTTTGATGCTTAT 58.111 30.769 0.00 0.00 39.84 1.73
747 750 7.275888 ACAGTGATTCAACTTTTGATGCTTA 57.724 32.000 0.00 0.00 39.84 3.09
749 752 5.278660 GGACAGTGATTCAACTTTTGATGCT 60.279 40.000 0.00 0.00 39.84 3.79
750 753 4.919754 GGACAGTGATTCAACTTTTGATGC 59.080 41.667 0.00 0.00 39.84 3.91
752 755 6.906157 ATGGACAGTGATTCAACTTTTGAT 57.094 33.333 0.00 0.00 39.84 2.57
753 756 7.448161 ACATATGGACAGTGATTCAACTTTTGA 59.552 33.333 7.80 0.00 38.04 2.69
754 757 7.596494 ACATATGGACAGTGATTCAACTTTTG 58.404 34.615 7.80 0.00 0.00 2.44
755 758 7.765695 ACATATGGACAGTGATTCAACTTTT 57.234 32.000 7.80 0.00 0.00 2.27
756 759 8.730680 GTTACATATGGACAGTGATTCAACTTT 58.269 33.333 7.80 0.00 0.00 2.66
757 760 7.336931 GGTTACATATGGACAGTGATTCAACTT 59.663 37.037 7.80 0.00 0.00 2.66
759 762 6.597672 TGGTTACATATGGACAGTGATTCAAC 59.402 38.462 7.80 0.00 0.00 3.18
760 763 6.597672 GTGGTTACATATGGACAGTGATTCAA 59.402 38.462 7.80 0.00 0.00 2.69
761 764 6.112734 GTGGTTACATATGGACAGTGATTCA 58.887 40.000 7.80 0.00 0.00 2.57
763 766 5.880332 GTGTGGTTACATATGGACAGTGATT 59.120 40.000 7.80 0.00 39.39 2.57
764 767 5.189736 AGTGTGGTTACATATGGACAGTGAT 59.810 40.000 7.80 0.00 39.39 3.06
765 768 4.530553 AGTGTGGTTACATATGGACAGTGA 59.469 41.667 7.80 0.00 39.39 3.41
766 769 4.832248 AGTGTGGTTACATATGGACAGTG 58.168 43.478 7.80 0.00 39.39 3.66
767 770 4.530553 TGAGTGTGGTTACATATGGACAGT 59.469 41.667 7.80 4.71 39.39 3.55
769 772 5.427378 CATGAGTGTGGTTACATATGGACA 58.573 41.667 7.80 0.00 39.39 4.02
771 774 4.719273 TCCATGAGTGTGGTTACATATGGA 59.281 41.667 7.80 14.42 43.92 3.41
773 776 7.420002 CATTTCCATGAGTGTGGTTACATATG 58.580 38.462 0.00 0.00 40.27 1.78
776 779 4.158394 GCATTTCCATGAGTGTGGTTACAT 59.842 41.667 0.00 0.00 40.27 2.29
777 780 3.505680 GCATTTCCATGAGTGTGGTTACA 59.494 43.478 0.00 0.00 40.27 2.41
778 781 3.505680 TGCATTTCCATGAGTGTGGTTAC 59.494 43.478 0.00 0.00 40.27 2.50
779 782 3.760738 TGCATTTCCATGAGTGTGGTTA 58.239 40.909 0.00 0.00 40.27 2.85
780 783 2.596346 TGCATTTCCATGAGTGTGGTT 58.404 42.857 0.00 0.00 40.27 3.67
781 784 2.291209 TGCATTTCCATGAGTGTGGT 57.709 45.000 0.00 0.00 40.27 4.16
782 785 3.243805 TGTTTGCATTTCCATGAGTGTGG 60.244 43.478 0.00 0.00 40.76 4.17
784 787 3.550639 CGTGTTTGCATTTCCATGAGTGT 60.551 43.478 0.00 0.00 31.07 3.55
789 963 1.712401 CCCGTGTTTGCATTTCCATG 58.288 50.000 0.00 0.00 0.00 3.66
823 997 3.242867 TGGTTTCAGATCTGGACTCTGT 58.757 45.455 22.42 0.00 40.79 3.41
1038 1242 2.735478 TACACCAGCGCGAAACCG 60.735 61.111 12.10 0.00 0.00 4.44
1815 2022 0.674895 CCTCAAAGCCGACCTCCTTG 60.675 60.000 0.00 0.00 0.00 3.61
1830 2037 1.536073 CCAGCTCCTTGACGACCTCA 61.536 60.000 0.00 0.00 0.00 3.86
2383 2591 0.247736 GAATGGAGCAGACGGTGAGT 59.752 55.000 0.00 0.00 0.00 3.41
2465 2704 1.084935 TCAAACCACACACGTCCACG 61.085 55.000 0.00 0.00 46.33 4.94
2564 2810 4.437930 CCGACCTAGTAAGTAACTCAACCG 60.438 50.000 0.00 0.00 39.80 4.44
2565 2811 4.702131 TCCGACCTAGTAAGTAACTCAACC 59.298 45.833 0.00 0.00 39.80 3.77
2566 2812 5.886960 TCCGACCTAGTAAGTAACTCAAC 57.113 43.478 0.00 0.00 39.80 3.18
2567 2813 6.318144 CAGATCCGACCTAGTAAGTAACTCAA 59.682 42.308 0.00 0.00 39.80 3.02
2568 2814 5.821470 CAGATCCGACCTAGTAAGTAACTCA 59.179 44.000 0.00 0.00 39.80 3.41
2569 2815 5.277925 GCAGATCCGACCTAGTAAGTAACTC 60.278 48.000 0.00 0.00 39.80 3.01
2570 2816 4.579753 GCAGATCCGACCTAGTAAGTAACT 59.420 45.833 0.00 0.00 42.62 2.24
2571 2817 4.554330 CGCAGATCCGACCTAGTAAGTAAC 60.554 50.000 0.00 0.00 0.00 2.50
2572 2818 3.562973 CGCAGATCCGACCTAGTAAGTAA 59.437 47.826 0.00 0.00 0.00 2.24
2573 2819 3.136763 CGCAGATCCGACCTAGTAAGTA 58.863 50.000 0.00 0.00 0.00 2.24
2574 2820 1.948145 CGCAGATCCGACCTAGTAAGT 59.052 52.381 0.00 0.00 0.00 2.24
2575 2821 1.267261 CCGCAGATCCGACCTAGTAAG 59.733 57.143 0.00 0.00 0.00 2.34
2576 2822 1.315690 CCGCAGATCCGACCTAGTAA 58.684 55.000 0.00 0.00 0.00 2.24
2577 2823 0.182061 ACCGCAGATCCGACCTAGTA 59.818 55.000 0.00 0.00 0.00 1.82
2578 2824 0.683504 AACCGCAGATCCGACCTAGT 60.684 55.000 0.00 0.00 0.00 2.57
2579 2825 0.030908 GAACCGCAGATCCGACCTAG 59.969 60.000 0.00 0.00 0.00 3.02
2580 2826 0.681887 TGAACCGCAGATCCGACCTA 60.682 55.000 0.00 0.00 0.00 3.08
2581 2827 1.982395 TGAACCGCAGATCCGACCT 60.982 57.895 0.00 0.00 0.00 3.85
2582 2828 2.577059 TGAACCGCAGATCCGACC 59.423 61.111 0.00 0.00 0.00 4.79
2591 2837 3.828451 ACCTAGTAAGTAACTGAACCGCA 59.172 43.478 0.00 0.00 39.39 5.69
2592 2838 4.171754 CACCTAGTAAGTAACTGAACCGC 58.828 47.826 0.00 0.00 39.39 5.68
2633 2879 2.412591 TCCAGATTCCAGATTCCTCCC 58.587 52.381 0.00 0.00 0.00 4.30
2680 2926 3.216800 TGGCTCTTTGATGATATGGCAC 58.783 45.455 0.00 0.00 0.00 5.01
2681 2927 3.483421 CTGGCTCTTTGATGATATGGCA 58.517 45.455 0.00 0.00 0.00 4.92
2682 2928 2.228343 GCTGGCTCTTTGATGATATGGC 59.772 50.000 0.00 0.00 0.00 4.40
2683 2929 3.752665 AGCTGGCTCTTTGATGATATGG 58.247 45.455 0.00 0.00 0.00 2.74
2684 2930 6.872628 TTAAGCTGGCTCTTTGATGATATG 57.127 37.500 0.00 0.00 0.00 1.78
2685 2931 6.016443 GCTTTAAGCTGGCTCTTTGATGATAT 60.016 38.462 10.01 0.00 38.45 1.63
2686 2932 5.297776 GCTTTAAGCTGGCTCTTTGATGATA 59.702 40.000 10.01 0.00 38.45 2.15
2687 2933 4.097589 GCTTTAAGCTGGCTCTTTGATGAT 59.902 41.667 10.01 0.00 38.45 2.45
2688 2934 3.441572 GCTTTAAGCTGGCTCTTTGATGA 59.558 43.478 10.01 0.00 38.45 2.92
2689 2935 3.428589 GGCTTTAAGCTGGCTCTTTGATG 60.429 47.826 16.89 0.00 41.99 3.07
2690 2936 2.757314 GGCTTTAAGCTGGCTCTTTGAT 59.243 45.455 16.89 0.00 41.99 2.57
2691 2937 2.162681 GGCTTTAAGCTGGCTCTTTGA 58.837 47.619 16.89 0.00 41.99 2.69
2692 2938 1.135575 CGGCTTTAAGCTGGCTCTTTG 60.136 52.381 17.34 0.00 43.75 2.77
2693 2939 1.168714 CGGCTTTAAGCTGGCTCTTT 58.831 50.000 17.34 0.00 43.75 2.52
2694 2940 2.859992 CGGCTTTAAGCTGGCTCTT 58.140 52.632 17.34 0.00 43.75 2.85
2695 2941 4.625800 CGGCTTTAAGCTGGCTCT 57.374 55.556 17.34 0.00 43.75 4.09
2701 2947 2.938956 ATATGGCTCGGCTTTAAGCT 57.061 45.000 16.89 0.00 41.99 3.74
2702 2948 5.629079 ATTAATATGGCTCGGCTTTAAGC 57.371 39.130 8.66 8.66 41.46 3.09
2703 2949 7.119846 AGCTTATTAATATGGCTCGGCTTTAAG 59.880 37.037 14.06 0.00 0.00 1.85
2704 2950 6.940298 AGCTTATTAATATGGCTCGGCTTTAA 59.060 34.615 14.06 0.00 0.00 1.52
2705 2951 6.472887 AGCTTATTAATATGGCTCGGCTTTA 58.527 36.000 14.06 0.00 0.00 1.85
2706 2952 5.316987 AGCTTATTAATATGGCTCGGCTTT 58.683 37.500 14.06 0.00 0.00 3.51
2707 2953 4.911390 AGCTTATTAATATGGCTCGGCTT 58.089 39.130 14.06 0.00 0.00 4.35
2708 2954 4.559862 AGCTTATTAATATGGCTCGGCT 57.440 40.909 14.06 6.08 0.00 5.52
2709 2955 4.271291 GCTAGCTTATTAATATGGCTCGGC 59.729 45.833 19.81 19.59 34.88 5.54
2710 2956 5.665459 AGCTAGCTTATTAATATGGCTCGG 58.335 41.667 12.68 16.05 34.88 4.63
2711 2957 9.400638 GTATAGCTAGCTTATTAATATGGCTCG 57.599 37.037 24.88 16.39 34.88 5.03
2712 2958 9.699703 GGTATAGCTAGCTTATTAATATGGCTC 57.300 37.037 24.88 11.35 34.88 4.70
2713 2959 8.652290 GGGTATAGCTAGCTTATTAATATGGCT 58.348 37.037 24.88 19.99 37.08 4.75
2714 2960 8.652290 AGGGTATAGCTAGCTTATTAATATGGC 58.348 37.037 24.88 6.00 0.00 4.40
2715 2961 9.988815 CAGGGTATAGCTAGCTTATTAATATGG 57.011 37.037 24.88 0.51 0.00 2.74
2716 2962 9.988815 CCAGGGTATAGCTAGCTTATTAATATG 57.011 37.037 24.88 12.15 0.00 1.78
2717 2963 8.652290 GCCAGGGTATAGCTAGCTTATTAATAT 58.348 37.037 24.88 10.84 0.00 1.28
2718 2964 7.844779 AGCCAGGGTATAGCTAGCTTATTAATA 59.155 37.037 24.88 11.29 34.38 0.98
2719 2965 6.674419 AGCCAGGGTATAGCTAGCTTATTAAT 59.326 38.462 24.88 12.39 34.38 1.40
2720 2966 6.023603 AGCCAGGGTATAGCTAGCTTATTAA 58.976 40.000 24.88 4.23 34.38 1.40
2721 2967 5.422331 CAGCCAGGGTATAGCTAGCTTATTA 59.578 44.000 24.88 4.69 34.38 0.98
2722 2968 4.223923 CAGCCAGGGTATAGCTAGCTTATT 59.776 45.833 24.88 10.97 34.38 1.40
2723 2969 3.772025 CAGCCAGGGTATAGCTAGCTTAT 59.228 47.826 24.88 15.82 34.38 1.73
2724 2970 3.165875 CAGCCAGGGTATAGCTAGCTTA 58.834 50.000 24.88 12.12 34.38 3.09
2725 2971 1.974236 CAGCCAGGGTATAGCTAGCTT 59.026 52.381 24.88 13.16 34.38 3.74
2726 2972 1.133009 ACAGCCAGGGTATAGCTAGCT 60.133 52.381 23.12 23.12 34.38 3.32
2727 2973 1.343069 ACAGCCAGGGTATAGCTAGC 58.657 55.000 6.62 6.62 34.38 3.42
2728 2974 4.589374 ACTTAACAGCCAGGGTATAGCTAG 59.411 45.833 0.00 0.00 34.38 3.42
2729 2975 4.344102 CACTTAACAGCCAGGGTATAGCTA 59.656 45.833 0.00 0.00 34.38 3.32
2730 2976 3.134804 CACTTAACAGCCAGGGTATAGCT 59.865 47.826 1.32 0.00 37.32 3.32
2731 2977 3.467803 CACTTAACAGCCAGGGTATAGC 58.532 50.000 0.00 0.00 0.00 2.97
2732 2978 3.181454 CCCACTTAACAGCCAGGGTATAG 60.181 52.174 0.00 0.00 0.00 1.31
2733 2979 2.775384 CCCACTTAACAGCCAGGGTATA 59.225 50.000 0.00 0.00 0.00 1.47
2734 2980 1.564348 CCCACTTAACAGCCAGGGTAT 59.436 52.381 0.00 0.00 0.00 2.73
2735 2981 0.988832 CCCACTTAACAGCCAGGGTA 59.011 55.000 0.00 0.00 0.00 3.69
2736 2982 1.767692 CCCACTTAACAGCCAGGGT 59.232 57.895 0.00 0.00 0.00 4.34
2737 2983 1.678970 GCCCACTTAACAGCCAGGG 60.679 63.158 0.00 0.00 39.33 4.45
2738 2984 0.251341 AAGCCCACTTAACAGCCAGG 60.251 55.000 0.00 0.00 33.13 4.45
2739 2985 1.168714 GAAGCCCACTTAACAGCCAG 58.831 55.000 0.00 0.00 35.82 4.85
2740 2986 0.476338 TGAAGCCCACTTAACAGCCA 59.524 50.000 0.00 0.00 35.82 4.75
2741 2987 1.839424 ATGAAGCCCACTTAACAGCC 58.161 50.000 0.00 0.00 35.82 4.85
2742 2988 5.385509 TTTAATGAAGCCCACTTAACAGC 57.614 39.130 0.00 0.00 35.82 4.40
2775 3021 9.969001 TGTTTATACCCAGCTTAAAGAACTAAT 57.031 29.630 0.00 0.00 0.00 1.73
2776 3022 9.223099 GTGTTTATACCCAGCTTAAAGAACTAA 57.777 33.333 0.00 0.00 0.00 2.24
2777 3023 7.546667 CGTGTTTATACCCAGCTTAAAGAACTA 59.453 37.037 0.00 0.00 0.00 2.24
2778 3024 6.370718 CGTGTTTATACCCAGCTTAAAGAACT 59.629 38.462 0.00 0.00 0.00 3.01
2779 3025 6.369615 TCGTGTTTATACCCAGCTTAAAGAAC 59.630 38.462 0.00 0.00 0.00 3.01
2780 3026 6.465948 TCGTGTTTATACCCAGCTTAAAGAA 58.534 36.000 0.00 0.00 0.00 2.52
2781 3027 6.040209 TCGTGTTTATACCCAGCTTAAAGA 57.960 37.500 0.00 0.00 0.00 2.52
2782 3028 6.920569 ATCGTGTTTATACCCAGCTTAAAG 57.079 37.500 0.00 0.00 0.00 1.85
2783 3029 6.094325 CCAATCGTGTTTATACCCAGCTTAAA 59.906 38.462 0.00 0.00 0.00 1.52
2784 3030 5.587043 CCAATCGTGTTTATACCCAGCTTAA 59.413 40.000 0.00 0.00 0.00 1.85
2785 3031 5.120399 CCAATCGTGTTTATACCCAGCTTA 58.880 41.667 0.00 0.00 0.00 3.09
2786 3032 3.945285 CCAATCGTGTTTATACCCAGCTT 59.055 43.478 0.00 0.00 0.00 3.74
2787 3033 3.541632 CCAATCGTGTTTATACCCAGCT 58.458 45.455 0.00 0.00 0.00 4.24
2788 3034 2.616842 CCCAATCGTGTTTATACCCAGC 59.383 50.000 0.00 0.00 0.00 4.85
2789 3035 3.625764 CACCCAATCGTGTTTATACCCAG 59.374 47.826 0.00 0.00 0.00 4.45
2790 3036 3.611970 CACCCAATCGTGTTTATACCCA 58.388 45.455 0.00 0.00 0.00 4.51
2791 3037 2.946990 CCACCCAATCGTGTTTATACCC 59.053 50.000 0.00 0.00 31.47 3.69
2792 3038 3.876341 TCCACCCAATCGTGTTTATACC 58.124 45.455 0.00 0.00 31.47 2.73
2793 3039 5.820947 AGATTCCACCCAATCGTGTTTATAC 59.179 40.000 0.00 0.00 37.77 1.47
2794 3040 5.996644 AGATTCCACCCAATCGTGTTTATA 58.003 37.500 0.00 0.00 37.77 0.98
2795 3041 4.855340 AGATTCCACCCAATCGTGTTTAT 58.145 39.130 0.00 0.00 37.77 1.40
2796 3042 4.258543 GAGATTCCACCCAATCGTGTTTA 58.741 43.478 0.00 0.00 37.77 2.01
2797 3043 3.081804 GAGATTCCACCCAATCGTGTTT 58.918 45.455 0.00 0.00 37.77 2.83
2798 3044 2.618045 GGAGATTCCACCCAATCGTGTT 60.618 50.000 0.00 0.00 37.77 3.32
2799 3045 1.065418 GGAGATTCCACCCAATCGTGT 60.065 52.381 0.00 0.00 37.77 4.49
2800 3046 1.210478 AGGAGATTCCACCCAATCGTG 59.790 52.381 0.00 0.00 39.61 4.35
2801 3047 1.584724 AGGAGATTCCACCCAATCGT 58.415 50.000 0.00 0.00 39.61 3.73
2802 3048 2.548920 GCTAGGAGATTCCACCCAATCG 60.549 54.545 0.00 0.00 39.61 3.34
2803 3049 2.548920 CGCTAGGAGATTCCACCCAATC 60.549 54.545 0.00 0.00 39.61 2.67
2804 3050 1.417890 CGCTAGGAGATTCCACCCAAT 59.582 52.381 0.00 0.00 39.61 3.16
2805 3051 0.830648 CGCTAGGAGATTCCACCCAA 59.169 55.000 0.00 0.00 39.61 4.12
2806 3052 0.325296 ACGCTAGGAGATTCCACCCA 60.325 55.000 0.00 0.00 39.61 4.51
2807 3053 0.831307 AACGCTAGGAGATTCCACCC 59.169 55.000 0.00 0.00 39.61 4.61
2808 3054 1.473434 CCAACGCTAGGAGATTCCACC 60.473 57.143 0.00 0.00 39.61 4.61
2809 3055 1.941325 CCAACGCTAGGAGATTCCAC 58.059 55.000 0.00 0.00 39.61 4.02
2810 3056 0.178068 GCCAACGCTAGGAGATTCCA 59.822 55.000 0.00 0.00 39.61 3.53
2811 3057 0.533085 GGCCAACGCTAGGAGATTCC 60.533 60.000 0.00 0.00 33.74 3.01
2812 3058 0.466124 AGGCCAACGCTAGGAGATTC 59.534 55.000 5.01 0.00 34.44 2.52
2813 3059 1.689273 CTAGGCCAACGCTAGGAGATT 59.311 52.381 5.01 0.00 34.44 2.40
2814 3060 1.333177 CTAGGCCAACGCTAGGAGAT 58.667 55.000 5.01 0.00 34.44 2.75
2815 3061 1.392710 GCTAGGCCAACGCTAGGAGA 61.393 60.000 5.01 0.00 34.44 3.71
2816 3062 1.068250 GCTAGGCCAACGCTAGGAG 59.932 63.158 5.01 0.00 34.44 3.69
2817 3063 2.782222 CGCTAGGCCAACGCTAGGA 61.782 63.158 5.01 0.00 34.44 2.94
2818 3064 2.279517 CGCTAGGCCAACGCTAGG 60.280 66.667 5.01 0.00 34.44 3.02
2830 3076 4.435436 TCACACCGCTGGCGCTAG 62.435 66.667 17.52 17.52 38.24 3.42
2831 3077 4.435436 CTCACACCGCTGGCGCTA 62.435 66.667 7.64 0.00 38.24 4.26
2838 3084 2.667536 CTTGCAGCTCACACCGCT 60.668 61.111 0.00 0.00 38.49 5.52
2839 3085 4.395583 GCTTGCAGCTCACACCGC 62.396 66.667 0.00 0.00 38.45 5.68
2840 3086 4.081030 CGCTTGCAGCTCACACCG 62.081 66.667 0.00 0.00 39.60 4.94
2841 3087 2.974698 ACGCTTGCAGCTCACACC 60.975 61.111 0.00 0.00 39.60 4.16
2842 3088 2.250485 CACGCTTGCAGCTCACAC 59.750 61.111 0.00 0.00 39.60 3.82
2852 3098 1.956170 CCCGGCTATAGCACGCTTG 60.956 63.158 25.53 13.11 44.36 4.01
2853 3099 2.088674 CTCCCGGCTATAGCACGCTT 62.089 60.000 25.53 0.00 44.36 4.68
2854 3100 2.520982 TCCCGGCTATAGCACGCT 60.521 61.111 25.53 0.00 44.36 5.07
2855 3101 2.049063 CTCCCGGCTATAGCACGC 60.049 66.667 25.53 8.14 44.36 5.34
2856 3102 1.173444 AGTCTCCCGGCTATAGCACG 61.173 60.000 25.53 23.23 44.36 5.34
2857 3103 0.315568 CAGTCTCCCGGCTATAGCAC 59.684 60.000 25.53 13.87 44.36 4.40
2858 3104 1.464376 GCAGTCTCCCGGCTATAGCA 61.464 60.000 25.53 4.70 44.36 3.49
2859 3105 1.290639 GCAGTCTCCCGGCTATAGC 59.709 63.158 16.78 16.78 41.14 2.97
2860 3106 0.600557 CTGCAGTCTCCCGGCTATAG 59.399 60.000 5.25 0.00 35.06 1.31
2861 3107 0.827925 CCTGCAGTCTCCCGGCTATA 60.828 60.000 13.81 0.00 35.06 1.31
2862 3108 2.136878 CCTGCAGTCTCCCGGCTAT 61.137 63.158 13.81 0.00 35.06 2.97
2863 3109 2.759973 CCTGCAGTCTCCCGGCTA 60.760 66.667 13.81 0.00 35.06 3.93
2864 3110 4.704103 TCCTGCAGTCTCCCGGCT 62.704 66.667 13.81 0.00 35.06 5.52
2865 3111 4.154347 CTCCTGCAGTCTCCCGGC 62.154 72.222 13.81 0.00 34.52 6.13
2866 3112 2.363018 TCTCCTGCAGTCTCCCGG 60.363 66.667 13.81 0.00 0.00 5.73
2867 3113 3.074999 GCTCTCCTGCAGTCTCCCG 62.075 68.421 13.81 0.00 0.00 5.14
2868 3114 2.730524 GGCTCTCCTGCAGTCTCCC 61.731 68.421 13.81 2.49 34.04 4.30
2869 3115 2.730524 GGGCTCTCCTGCAGTCTCC 61.731 68.421 13.81 6.11 34.04 3.71
2870 3116 2.899505 GGGCTCTCCTGCAGTCTC 59.100 66.667 13.81 0.00 34.04 3.36
2871 3117 3.073735 CGGGCTCTCCTGCAGTCT 61.074 66.667 13.81 0.00 34.04 3.24
2880 3126 1.068921 GAGAATGGAGCGGGCTCTC 59.931 63.158 19.14 9.92 42.38 3.20
2881 3127 0.980231 AAGAGAATGGAGCGGGCTCT 60.980 55.000 19.14 0.64 42.38 4.09
2882 3128 0.107459 AAAGAGAATGGAGCGGGCTC 60.107 55.000 12.17 12.17 42.04 4.70
2883 3129 0.107459 GAAAGAGAATGGAGCGGGCT 60.107 55.000 0.00 0.00 0.00 5.19
2884 3130 1.098129 GGAAAGAGAATGGAGCGGGC 61.098 60.000 0.00 0.00 0.00 6.13
2885 3131 0.543749 AGGAAAGAGAATGGAGCGGG 59.456 55.000 0.00 0.00 0.00 6.13
2886 3132 1.661341 CAGGAAAGAGAATGGAGCGG 58.339 55.000 0.00 0.00 0.00 5.52
2887 3133 1.012841 GCAGGAAAGAGAATGGAGCG 58.987 55.000 0.00 0.00 0.00 5.03
2888 3134 2.416680 AGCAGGAAAGAGAATGGAGC 57.583 50.000 0.00 0.00 0.00 4.70
2889 3135 4.587891 AGAAAGCAGGAAAGAGAATGGAG 58.412 43.478 0.00 0.00 0.00 3.86
2890 3136 4.288105 AGAGAAAGCAGGAAAGAGAATGGA 59.712 41.667 0.00 0.00 0.00 3.41
2891 3137 4.587891 AGAGAAAGCAGGAAAGAGAATGG 58.412 43.478 0.00 0.00 0.00 3.16
2892 3138 5.490159 AGAGAGAAAGCAGGAAAGAGAATG 58.510 41.667 0.00 0.00 0.00 2.67
2893 3139 5.484998 AGAGAGAGAAAGCAGGAAAGAGAAT 59.515 40.000 0.00 0.00 0.00 2.40
2894 3140 4.837860 AGAGAGAGAAAGCAGGAAAGAGAA 59.162 41.667 0.00 0.00 0.00 2.87
2895 3141 4.220382 CAGAGAGAGAAAGCAGGAAAGAGA 59.780 45.833 0.00 0.00 0.00 3.10
2896 3142 4.497300 CAGAGAGAGAAAGCAGGAAAGAG 58.503 47.826 0.00 0.00 0.00 2.85
2897 3143 3.306641 GCAGAGAGAGAAAGCAGGAAAGA 60.307 47.826 0.00 0.00 0.00 2.52
2898 3144 3.002102 GCAGAGAGAGAAAGCAGGAAAG 58.998 50.000 0.00 0.00 0.00 2.62
2899 3145 2.289945 GGCAGAGAGAGAAAGCAGGAAA 60.290 50.000 0.00 0.00 0.00 3.13
2900 3146 1.277557 GGCAGAGAGAGAAAGCAGGAA 59.722 52.381 0.00 0.00 0.00 3.36
2901 3147 0.901124 GGCAGAGAGAGAAAGCAGGA 59.099 55.000 0.00 0.00 0.00 3.86
2902 3148 0.612229 TGGCAGAGAGAGAAAGCAGG 59.388 55.000 0.00 0.00 0.00 4.85
2903 3149 1.724429 GTGGCAGAGAGAGAAAGCAG 58.276 55.000 0.00 0.00 0.00 4.24
2904 3150 0.037882 CGTGGCAGAGAGAGAAAGCA 60.038 55.000 0.00 0.00 0.00 3.91
2905 3151 0.037790 ACGTGGCAGAGAGAGAAAGC 60.038 55.000 0.00 0.00 0.00 3.51
2906 3152 2.159310 CCTACGTGGCAGAGAGAGAAAG 60.159 54.545 0.00 0.00 0.00 2.62
2907 3153 1.819288 CCTACGTGGCAGAGAGAGAAA 59.181 52.381 0.00 0.00 0.00 2.52
2908 3154 1.004394 TCCTACGTGGCAGAGAGAGAA 59.996 52.381 0.00 0.00 35.26 2.87
2909 3155 0.618981 TCCTACGTGGCAGAGAGAGA 59.381 55.000 0.00 0.00 35.26 3.10
2910 3156 1.686355 ATCCTACGTGGCAGAGAGAG 58.314 55.000 0.00 0.00 35.26 3.20
2911 3157 2.145397 AATCCTACGTGGCAGAGAGA 57.855 50.000 0.00 0.00 35.26 3.10
2912 3158 2.544685 CAAATCCTACGTGGCAGAGAG 58.455 52.381 0.00 0.00 35.26 3.20
2913 3159 1.207089 CCAAATCCTACGTGGCAGAGA 59.793 52.381 0.00 0.00 35.26 3.10
2914 3160 1.207089 TCCAAATCCTACGTGGCAGAG 59.793 52.381 0.00 0.00 35.26 3.35
2915 3161 1.271856 TCCAAATCCTACGTGGCAGA 58.728 50.000 0.00 0.00 35.26 4.26
2916 3162 1.942657 CATCCAAATCCTACGTGGCAG 59.057 52.381 0.00 0.00 35.26 4.85
2917 3163 1.557371 TCATCCAAATCCTACGTGGCA 59.443 47.619 0.00 0.00 35.26 4.92
2918 3164 2.213499 CTCATCCAAATCCTACGTGGC 58.787 52.381 0.00 0.00 35.26 5.01
2919 3165 2.158900 AGCTCATCCAAATCCTACGTGG 60.159 50.000 0.00 0.00 37.10 4.94
2920 3166 2.868583 CAGCTCATCCAAATCCTACGTG 59.131 50.000 0.00 0.00 0.00 4.49
2921 3167 2.158900 CCAGCTCATCCAAATCCTACGT 60.159 50.000 0.00 0.00 0.00 3.57
2922 3168 2.487934 CCAGCTCATCCAAATCCTACG 58.512 52.381 0.00 0.00 0.00 3.51
2923 3169 2.225467 GCCAGCTCATCCAAATCCTAC 58.775 52.381 0.00 0.00 0.00 3.18
2924 3170 1.845791 TGCCAGCTCATCCAAATCCTA 59.154 47.619 0.00 0.00 0.00 2.94
2925 3171 0.627451 TGCCAGCTCATCCAAATCCT 59.373 50.000 0.00 0.00 0.00 3.24
2926 3172 1.477553 TTGCCAGCTCATCCAAATCC 58.522 50.000 0.00 0.00 0.00 3.01
2927 3173 3.454375 CATTTGCCAGCTCATCCAAATC 58.546 45.455 7.18 0.00 36.17 2.17
2928 3174 2.419574 GCATTTGCCAGCTCATCCAAAT 60.420 45.455 0.00 0.00 38.14 2.32
2929 3175 1.066716 GCATTTGCCAGCTCATCCAAA 60.067 47.619 0.00 0.00 34.31 3.28
2930 3176 0.533491 GCATTTGCCAGCTCATCCAA 59.467 50.000 0.00 0.00 34.31 3.53
2931 3177 0.323999 AGCATTTGCCAGCTCATCCA 60.324 50.000 0.00 0.00 43.38 3.41
2932 3178 1.683943 TAGCATTTGCCAGCTCATCC 58.316 50.000 0.00 0.00 42.05 3.51
2933 3179 3.119919 GCTATAGCATTTGCCAGCTCATC 60.120 47.826 20.01 0.00 42.05 2.92
2934 3180 2.818432 GCTATAGCATTTGCCAGCTCAT 59.182 45.455 20.01 0.00 42.05 2.90
2935 3181 2.224606 GCTATAGCATTTGCCAGCTCA 58.775 47.619 20.01 0.00 42.05 4.26
2936 3182 1.538950 GGCTATAGCATTTGCCAGCTC 59.461 52.381 25.53 0.43 44.34 4.09
2937 3183 1.613836 GGCTATAGCATTTGCCAGCT 58.386 50.000 25.53 0.00 44.34 4.24
2941 3187 1.268899 CAGCAGGCTATAGCATTTGCC 59.731 52.381 29.13 14.76 41.82 4.52
2942 3188 2.031333 GTCAGCAGGCTATAGCATTTGC 60.031 50.000 27.23 27.23 44.36 3.68
2943 3189 3.474600 AGTCAGCAGGCTATAGCATTTG 58.525 45.455 25.53 19.54 44.36 2.32
2944 3190 3.853355 AGTCAGCAGGCTATAGCATTT 57.147 42.857 25.53 7.17 44.36 2.32
2945 3191 3.853355 AAGTCAGCAGGCTATAGCATT 57.147 42.857 25.53 10.84 44.36 3.56
2946 3192 5.495926 AATAAGTCAGCAGGCTATAGCAT 57.504 39.130 25.53 17.00 44.36 3.79
2947 3193 4.963318 AATAAGTCAGCAGGCTATAGCA 57.037 40.909 25.53 1.35 44.36 3.49
2948 3194 8.001881 TCTATAATAAGTCAGCAGGCTATAGC 57.998 38.462 16.78 16.78 41.14 2.97
2949 3195 8.629158 CCTCTATAATAAGTCAGCAGGCTATAG 58.371 40.741 0.00 0.00 0.00 1.31
2950 3196 8.116669 ACCTCTATAATAAGTCAGCAGGCTATA 58.883 37.037 0.00 0.00 0.00 1.31
2951 3197 6.957020 ACCTCTATAATAAGTCAGCAGGCTAT 59.043 38.462 0.00 0.00 0.00 2.97
2952 3198 6.315714 ACCTCTATAATAAGTCAGCAGGCTA 58.684 40.000 0.00 0.00 0.00 3.93
2953 3199 5.151454 ACCTCTATAATAAGTCAGCAGGCT 58.849 41.667 0.00 0.00 0.00 4.58
2954 3200 5.476091 ACCTCTATAATAAGTCAGCAGGC 57.524 43.478 0.00 0.00 0.00 4.85
2971 3217 9.939424 AGTTCTAAGACCTATGTATTTACCTCT 57.061 33.333 0.00 0.00 0.00 3.69
2974 3220 9.043079 GCAAGTTCTAAGACCTATGTATTTACC 57.957 37.037 0.00 0.00 0.00 2.85
2975 3221 9.595823 TGCAAGTTCTAAGACCTATGTATTTAC 57.404 33.333 0.00 0.00 0.00 2.01
2976 3222 9.595823 GTGCAAGTTCTAAGACCTATGTATTTA 57.404 33.333 0.00 0.00 0.00 1.40
2977 3223 7.277981 CGTGCAAGTTCTAAGACCTATGTATTT 59.722 37.037 0.00 0.00 0.00 1.40
2978 3224 6.757010 CGTGCAAGTTCTAAGACCTATGTATT 59.243 38.462 0.00 0.00 0.00 1.89
2979 3225 6.273825 CGTGCAAGTTCTAAGACCTATGTAT 58.726 40.000 0.00 0.00 0.00 2.29
2980 3226 5.647589 CGTGCAAGTTCTAAGACCTATGTA 58.352 41.667 0.00 0.00 0.00 2.29
2981 3227 4.495422 CGTGCAAGTTCTAAGACCTATGT 58.505 43.478 0.00 0.00 0.00 2.29
2982 3228 3.307242 GCGTGCAAGTTCTAAGACCTATG 59.693 47.826 0.59 0.00 0.00 2.23
2983 3229 3.522553 GCGTGCAAGTTCTAAGACCTAT 58.477 45.455 0.59 0.00 0.00 2.57
2984 3230 2.670229 CGCGTGCAAGTTCTAAGACCTA 60.670 50.000 0.00 0.00 0.00 3.08
2985 3231 1.797025 GCGTGCAAGTTCTAAGACCT 58.203 50.000 0.59 0.00 0.00 3.85
2986 3232 0.438830 CGCGTGCAAGTTCTAAGACC 59.561 55.000 0.00 0.00 0.00 3.85
2987 3233 0.438830 CCGCGTGCAAGTTCTAAGAC 59.561 55.000 4.92 0.00 0.00 3.01
2988 3234 1.289109 GCCGCGTGCAAGTTCTAAGA 61.289 55.000 13.61 0.00 40.77 2.10
2989 3235 1.132640 GCCGCGTGCAAGTTCTAAG 59.867 57.895 13.61 0.00 40.77 2.18
2990 3236 2.663478 CGCCGCGTGCAAGTTCTAA 61.663 57.895 17.57 0.00 41.33 2.10
2991 3237 2.829043 ATCGCCGCGTGCAAGTTCTA 62.829 55.000 13.39 0.00 41.33 2.10
2992 3238 4.961511 TCGCCGCGTGCAAGTTCT 62.962 61.111 13.39 0.00 41.33 3.01
2993 3239 3.702334 GATCGCCGCGTGCAAGTTC 62.702 63.158 13.39 6.41 41.33 3.01
2994 3240 3.788766 GATCGCCGCGTGCAAGTT 61.789 61.111 13.39 1.52 41.33 2.66
2996 3242 4.505217 GTGATCGCCGCGTGCAAG 62.505 66.667 13.39 0.00 41.33 4.01
2999 3245 3.788766 AAAGTGATCGCCGCGTGC 61.789 61.111 13.39 7.50 0.00 5.34
3000 3246 1.695893 ATCAAAGTGATCGCCGCGTG 61.696 55.000 13.39 1.61 29.59 5.34
3001 3247 1.447838 ATCAAAGTGATCGCCGCGT 60.448 52.632 13.39 0.00 29.59 6.01
3002 3248 1.011904 CATCAAAGTGATCGCCGCG 60.012 57.895 6.39 6.39 34.28 6.46
3003 3249 1.297893 GCATCAAAGTGATCGCCGC 60.298 57.895 1.76 0.00 34.28 6.53
3004 3250 0.247814 GTGCATCAAAGTGATCGCCG 60.248 55.000 1.76 0.00 34.28 6.46
3005 3251 0.804364 TGTGCATCAAAGTGATCGCC 59.196 50.000 1.76 0.00 34.28 5.54
3006 3252 2.617250 TTGTGCATCAAAGTGATCGC 57.383 45.000 0.00 0.00 34.28 4.58
3020 3266 3.549873 ACACGTATTTTGCAACTTTGTGC 59.450 39.130 0.00 0.00 45.15 4.57
3021 3267 5.694674 AACACGTATTTTGCAACTTTGTG 57.305 34.783 0.00 7.52 0.00 3.33
3022 3268 5.062809 CCAAACACGTATTTTGCAACTTTGT 59.937 36.000 13.79 0.00 33.37 2.83
3023 3269 5.488458 CCAAACACGTATTTTGCAACTTTG 58.512 37.500 13.79 0.00 33.37 2.77
3024 3270 4.568760 CCCAAACACGTATTTTGCAACTTT 59.431 37.500 13.79 0.00 33.37 2.66
3025 3271 4.116238 CCCAAACACGTATTTTGCAACTT 58.884 39.130 13.79 0.00 33.37 2.66
3026 3272 3.491792 CCCCAAACACGTATTTTGCAACT 60.492 43.478 13.79 0.00 33.37 3.16
3027 3273 2.797719 CCCCAAACACGTATTTTGCAAC 59.202 45.455 13.79 0.00 33.37 4.17
3028 3274 2.431057 ACCCCAAACACGTATTTTGCAA 59.569 40.909 13.79 0.00 33.37 4.08
3029 3275 2.032620 ACCCCAAACACGTATTTTGCA 58.967 42.857 13.79 0.00 33.37 4.08
3030 3276 2.034812 TGACCCCAAACACGTATTTTGC 59.965 45.455 13.79 4.21 33.37 3.68
3031 3277 3.316868 AGTGACCCCAAACACGTATTTTG 59.683 43.478 12.71 12.71 41.22 2.44
3032 3278 3.558033 AGTGACCCCAAACACGTATTTT 58.442 40.909 0.00 0.00 41.22 1.82
3033 3279 3.217681 AGTGACCCCAAACACGTATTT 57.782 42.857 0.00 0.00 41.22 1.40
3034 3280 2.943036 AGTGACCCCAAACACGTATT 57.057 45.000 0.00 0.00 41.22 1.89
3035 3281 4.067192 GTTTAGTGACCCCAAACACGTAT 58.933 43.478 0.00 0.00 41.22 3.06
3036 3282 3.134442 AGTTTAGTGACCCCAAACACGTA 59.866 43.478 0.00 0.00 41.22 3.57
3037 3283 2.092807 AGTTTAGTGACCCCAAACACGT 60.093 45.455 7.49 0.00 41.22 4.49
3038 3284 2.567985 AGTTTAGTGACCCCAAACACG 58.432 47.619 7.49 0.00 41.22 4.49
3039 3285 3.490249 GCAAGTTTAGTGACCCCAAACAC 60.490 47.826 7.49 0.00 35.17 3.32
3040 3286 2.691011 GCAAGTTTAGTGACCCCAAACA 59.309 45.455 7.49 0.00 35.17 2.83
3041 3287 2.287368 CGCAAGTTTAGTGACCCCAAAC 60.287 50.000 0.00 0.00 33.35 2.93
3042 3288 1.950909 CGCAAGTTTAGTGACCCCAAA 59.049 47.619 0.00 0.00 0.00 3.28
3043 3289 1.141254 TCGCAAGTTTAGTGACCCCAA 59.859 47.619 0.00 0.00 39.48 4.12
3044 3290 0.759959 TCGCAAGTTTAGTGACCCCA 59.240 50.000 0.00 0.00 39.48 4.96
3045 3291 1.001633 TCTCGCAAGTTTAGTGACCCC 59.998 52.381 0.00 0.00 39.48 4.95
3046 3292 2.067013 GTCTCGCAAGTTTAGTGACCC 58.933 52.381 0.00 0.00 39.48 4.46
3047 3293 2.731976 CAGTCTCGCAAGTTTAGTGACC 59.268 50.000 6.14 0.00 39.48 4.02
3048 3294 3.381949 ACAGTCTCGCAAGTTTAGTGAC 58.618 45.455 0.00 0.00 39.48 3.67
3049 3295 3.728076 ACAGTCTCGCAAGTTTAGTGA 57.272 42.857 0.00 0.00 39.48 3.41
3050 3296 3.802139 TGAACAGTCTCGCAAGTTTAGTG 59.198 43.478 0.00 0.00 39.48 2.74
3051 3297 4.054780 TGAACAGTCTCGCAAGTTTAGT 57.945 40.909 0.00 0.00 39.48 2.24
3052 3298 5.403897 TTTGAACAGTCTCGCAAGTTTAG 57.596 39.130 0.00 0.00 39.48 1.85
3053 3299 6.480651 TGTATTTGAACAGTCTCGCAAGTTTA 59.519 34.615 0.00 0.00 39.48 2.01
3054 3300 4.900635 ATTTGAACAGTCTCGCAAGTTT 57.099 36.364 0.00 0.00 39.48 2.66
3055 3301 4.814234 TGTATTTGAACAGTCTCGCAAGTT 59.186 37.500 0.00 0.00 39.48 2.66
3056 3302 4.377021 TGTATTTGAACAGTCTCGCAAGT 58.623 39.130 0.00 0.00 39.48 3.16
3057 3303 4.950926 CTGTATTTGAACAGTCTCGCAAG 58.049 43.478 0.00 0.00 41.63 4.01
3058 3304 4.990543 CTGTATTTGAACAGTCTCGCAA 57.009 40.909 0.00 0.00 41.63 4.85
3067 3313 6.450545 CAGAGAGAGTGACTGTATTTGAACA 58.549 40.000 0.00 0.00 0.00 3.18
3068 3314 6.942886 CAGAGAGAGTGACTGTATTTGAAC 57.057 41.667 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.