Multiple sequence alignment - TraesCS1A01G204500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G204500 chr1A 100.000 2369 0 0 635 3003 366297368 366295000 0.000000e+00 4375.0
1 TraesCS1A01G204500 chr1A 100.000 378 0 0 1 378 366298002 366297625 0.000000e+00 699.0
2 TraesCS1A01G204500 chr1A 80.871 758 122 17 2260 3000 38579592 38580343 2.600000e-160 575.0
3 TraesCS1A01G204500 chr1A 99.648 284 1 0 83 366 366297368 366297085 1.230000e-143 520.0
4 TraesCS1A01G204500 chr1A 99.648 284 1 0 635 918 366297920 366297637 1.230000e-143 520.0
5 TraesCS1A01G204500 chr1A 81.818 506 63 19 1365 1855 366367192 366366701 6.030000e-107 398.0
6 TraesCS1A01G204500 chr1B 97.145 1366 37 2 895 2259 395277177 395275813 0.000000e+00 2305.0
7 TraesCS1A01G204500 chr1B 83.772 1368 162 41 900 2239 395310380 395309045 0.000000e+00 1242.0
8 TraesCS1A01G204500 chr1D 96.570 1108 36 2 895 2001 293934100 293932994 0.000000e+00 1834.0
9 TraesCS1A01G204500 chr1D 84.132 1336 160 36 900 2198 293949674 293948354 0.000000e+00 1245.0
10 TraesCS1A01G204500 chr1D 92.237 219 13 2 2044 2259 293933004 293932787 1.050000e-79 307.0
11 TraesCS1A01G204500 chr5A 97.312 744 16 2 2260 3003 476411718 476412457 0.000000e+00 1260.0
12 TraesCS1A01G204500 chr5A 81.028 759 119 18 2260 3000 425495635 425494884 5.580000e-162 580.0
13 TraesCS1A01G204500 chr5A 97.337 338 9 0 6 343 605030630 605030293 2.600000e-160 575.0
14 TraesCS1A01G204500 chr5A 96.935 261 8 0 635 895 605030553 605030293 3.550000e-119 438.0
15 TraesCS1A01G204500 chr6D 89.774 753 62 7 2260 3003 186788374 186789120 0.000000e+00 950.0
16 TraesCS1A01G204500 chr2A 91.595 464 34 3 2253 2712 544297010 544296548 1.170000e-178 636.0
17 TraesCS1A01G204500 chr2A 80.475 758 125 17 2260 3000 617728317 617729068 2.610000e-155 558.0
18 TraesCS1A01G204500 chr2A 94.186 344 19 1 1 344 658878405 658878063 9.540000e-145 523.0
19 TraesCS1A01G204500 chr2A 94.656 262 13 1 635 896 658878323 658878063 3.600000e-109 405.0
20 TraesCS1A01G204500 chr4B 97.384 344 8 1 1 343 326964469 326964812 4.310000e-163 584.0
21 TraesCS1A01G204500 chr4B 97.328 262 6 1 635 895 326964551 326964812 7.640000e-121 444.0
22 TraesCS1A01G204500 chr3A 80.158 761 127 18 2258 3001 707900409 707899656 5.660000e-152 547.0
23 TraesCS1A01G204500 chr3A 79.815 758 130 17 2260 3000 707688829 707688078 5.700000e-147 531.0
24 TraesCS1A01G204500 chr3A 94.643 56 3 0 1 56 13550616 13550561 1.480000e-13 87.9
25 TraesCS1A01G204500 chrUn 79.815 758 130 17 2260 3000 344494691 344493940 5.700000e-147 531.0
26 TraesCS1A01G204500 chr7D 86.447 273 33 4 76 346 623790937 623790667 2.260000e-76 296.0
27 TraesCS1A01G204500 chr7D 86.038 265 34 3 635 898 623790929 623790667 6.340000e-72 281.0
28 TraesCS1A01G204500 chr7D 80.095 211 36 6 639 846 342337262 342337055 5.180000e-33 152.0
29 TraesCS1A01G204500 chr7D 80.095 211 36 6 87 294 342337262 342337055 5.180000e-33 152.0
30 TraesCS1A01G204500 chr7A 85.973 221 30 1 76 295 418610152 418610372 5.000000e-58 235.0
31 TraesCS1A01G204500 chr7A 85.047 214 31 1 635 847 418610159 418610372 1.810000e-52 217.0
32 TraesCS1A01G204500 chr3B 85.789 190 27 0 2253 2442 763044433 763044244 5.080000e-48 202.0
33 TraesCS1A01G204500 chr2B 83.784 185 27 3 2260 2442 319224182 319223999 3.980000e-39 172.0
34 TraesCS1A01G204500 chr2B 83.060 183 31 0 2260 2442 394121085 394120903 1.850000e-37 167.0
35 TraesCS1A01G204500 chr2D 77.289 273 52 9 76 343 190020075 190020342 5.180000e-33 152.0
36 TraesCS1A01G204500 chr2D 77.273 264 52 8 635 895 190020084 190020342 6.710000e-32 148.0
37 TraesCS1A01G204500 chr5D 77.056 231 44 9 75 302 553794574 553794350 1.130000e-24 124.0
38 TraesCS1A01G204500 chr5D 77.130 223 42 9 635 854 553794566 553794350 1.460000e-23 121.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G204500 chr1A 366295000 366298002 3002 True 1528.5 4375 99.8240 1 3003 4 chr1A.!!$R2 3002
1 TraesCS1A01G204500 chr1A 38579592 38580343 751 False 575.0 575 80.8710 2260 3000 1 chr1A.!!$F1 740
2 TraesCS1A01G204500 chr1B 395275813 395277177 1364 True 2305.0 2305 97.1450 895 2259 1 chr1B.!!$R1 1364
3 TraesCS1A01G204500 chr1B 395309045 395310380 1335 True 1242.0 1242 83.7720 900 2239 1 chr1B.!!$R2 1339
4 TraesCS1A01G204500 chr1D 293948354 293949674 1320 True 1245.0 1245 84.1320 900 2198 1 chr1D.!!$R1 1298
5 TraesCS1A01G204500 chr1D 293932787 293934100 1313 True 1070.5 1834 94.4035 895 2259 2 chr1D.!!$R2 1364
6 TraesCS1A01G204500 chr5A 476411718 476412457 739 False 1260.0 1260 97.3120 2260 3003 1 chr5A.!!$F1 743
7 TraesCS1A01G204500 chr5A 425494884 425495635 751 True 580.0 580 81.0280 2260 3000 1 chr5A.!!$R1 740
8 TraesCS1A01G204500 chr6D 186788374 186789120 746 False 950.0 950 89.7740 2260 3003 1 chr6D.!!$F1 743
9 TraesCS1A01G204500 chr2A 617728317 617729068 751 False 558.0 558 80.4750 2260 3000 1 chr2A.!!$F1 740
10 TraesCS1A01G204500 chr3A 707899656 707900409 753 True 547.0 547 80.1580 2258 3001 1 chr3A.!!$R3 743
11 TraesCS1A01G204500 chr3A 707688078 707688829 751 True 531.0 531 79.8150 2260 3000 1 chr3A.!!$R2 740
12 TraesCS1A01G204500 chrUn 344493940 344494691 751 True 531.0 531 79.8150 2260 3000 1 chrUn.!!$R1 740

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
24 25 0.032403 AGTTAGTTGCACGTACGGCA 59.968 50.0 22.10 22.10 40.0 5.69 F
50 51 0.101040 CGGTTCGAATACCAGCGGTA 59.899 55.0 0.00 9.38 42.8 4.02 F
172 173 0.179145 GAACATGCCACATCAGCTGC 60.179 55.0 9.47 0.00 0.0 5.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1350 1354 0.031817 ATTCCCCTTGCCCTTCCATG 60.032 55.0 0.0 0.0 0.00 3.66 R
1644 1654 0.394565 AAGAGTGAGTGACAGGGCAC 59.605 55.0 0.0 0.0 39.05 5.01 R
2666 2705 0.812549 GACGAGAGGAGGAGGTTGAC 59.187 60.0 0.0 0.0 0.00 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.173382 GCCGCAGTTAGTTGCACG 59.827 61.111 0.00 0.00 44.28 5.34
18 19 2.604174 GCCGCAGTTAGTTGCACGT 61.604 57.895 0.00 0.00 44.28 4.49
19 20 1.286354 GCCGCAGTTAGTTGCACGTA 61.286 55.000 0.00 0.00 44.28 3.57
20 21 0.437295 CCGCAGTTAGTTGCACGTAC 59.563 55.000 0.00 0.00 44.28 3.67
21 22 0.090676 CGCAGTTAGTTGCACGTACG 59.909 55.000 15.01 15.01 44.28 3.67
22 23 0.437295 GCAGTTAGTTGCACGTACGG 59.563 55.000 21.06 9.73 43.53 4.02
23 24 0.437295 CAGTTAGTTGCACGTACGGC 59.563 55.000 21.06 19.36 0.00 5.68
24 25 0.032403 AGTTAGTTGCACGTACGGCA 59.968 50.000 22.10 22.10 40.00 5.69
25 26 0.162294 GTTAGTTGCACGTACGGCAC 59.838 55.000 24.60 19.65 41.75 5.01
42 43 3.623330 CGGCGCCGGTTCGAATAC 61.623 66.667 40.50 0.62 35.56 1.89
43 44 3.267118 GGCGCCGGTTCGAATACC 61.267 66.667 12.58 0.00 34.72 2.73
44 45 2.509786 GCGCCGGTTCGAATACCA 60.510 61.111 1.90 0.00 38.12 3.25
45 46 2.522638 GCGCCGGTTCGAATACCAG 61.523 63.158 1.90 0.00 38.12 4.00
46 47 2.522638 CGCCGGTTCGAATACCAGC 61.523 63.158 1.90 2.40 38.07 4.85
47 48 2.522638 GCCGGTTCGAATACCAGCG 61.523 63.158 1.90 0.00 38.12 5.18
48 49 1.881252 CCGGTTCGAATACCAGCGG 60.881 63.158 9.96 9.96 44.41 5.52
49 50 1.153706 CGGTTCGAATACCAGCGGT 60.154 57.895 0.00 5.58 38.12 5.68
50 51 0.101040 CGGTTCGAATACCAGCGGTA 59.899 55.000 0.00 9.38 42.80 4.02
51 52 1.849097 GGTTCGAATACCAGCGGTAG 58.151 55.000 0.00 0.00 41.83 3.18
52 53 1.206523 GTTCGAATACCAGCGGTAGC 58.793 55.000 0.00 6.86 41.83 3.58
62 63 3.708734 GCGGTAGCGCGTGTGTTT 61.709 61.111 24.65 0.00 0.00 2.83
63 64 2.932905 CGGTAGCGCGTGTGTTTT 59.067 55.556 8.43 0.00 0.00 2.43
64 65 1.888958 GCGGTAGCGCGTGTGTTTTA 61.889 55.000 24.65 0.00 0.00 1.52
65 66 0.717224 CGGTAGCGCGTGTGTTTTAT 59.283 50.000 8.43 0.00 0.00 1.40
66 67 1.127213 CGGTAGCGCGTGTGTTTTATT 59.873 47.619 8.43 0.00 0.00 1.40
67 68 2.411806 CGGTAGCGCGTGTGTTTTATTT 60.412 45.455 8.43 0.00 0.00 1.40
68 69 2.906161 GGTAGCGCGTGTGTTTTATTTG 59.094 45.455 8.43 0.00 0.00 2.32
69 70 3.364167 GGTAGCGCGTGTGTTTTATTTGA 60.364 43.478 8.43 0.00 0.00 2.69
70 71 2.916111 AGCGCGTGTGTTTTATTTGAG 58.084 42.857 8.43 0.00 0.00 3.02
71 72 2.289547 AGCGCGTGTGTTTTATTTGAGT 59.710 40.909 8.43 0.00 0.00 3.41
72 73 3.495377 AGCGCGTGTGTTTTATTTGAGTA 59.505 39.130 8.43 0.00 0.00 2.59
73 74 3.838550 GCGCGTGTGTTTTATTTGAGTAG 59.161 43.478 8.43 0.00 0.00 2.57
74 75 4.376615 GCGCGTGTGTTTTATTTGAGTAGA 60.377 41.667 8.43 0.00 0.00 2.59
75 76 5.670341 GCGCGTGTGTTTTATTTGAGTAGAT 60.670 40.000 8.43 0.00 0.00 1.98
76 77 6.304126 CGCGTGTGTTTTATTTGAGTAGATT 58.696 36.000 0.00 0.00 0.00 2.40
77 78 6.795114 CGCGTGTGTTTTATTTGAGTAGATTT 59.205 34.615 0.00 0.00 0.00 2.17
78 79 7.322699 CGCGTGTGTTTTATTTGAGTAGATTTT 59.677 33.333 0.00 0.00 0.00 1.82
79 80 8.964150 GCGTGTGTTTTATTTGAGTAGATTTTT 58.036 29.630 0.00 0.00 0.00 1.94
97 98 3.552132 TTTTTGGCAGGACCCTTTTTC 57.448 42.857 0.00 0.00 37.83 2.29
98 99 2.166907 TTTGGCAGGACCCTTTTTCA 57.833 45.000 0.00 0.00 37.83 2.69
99 100 1.408969 TTGGCAGGACCCTTTTTCAC 58.591 50.000 0.00 0.00 37.83 3.18
100 101 0.260230 TGGCAGGACCCTTTTTCACA 59.740 50.000 0.00 0.00 37.83 3.58
101 102 1.342474 TGGCAGGACCCTTTTTCACAA 60.342 47.619 0.00 0.00 37.83 3.33
102 103 1.760029 GGCAGGACCCTTTTTCACAAA 59.240 47.619 0.00 0.00 0.00 2.83
103 104 2.483013 GGCAGGACCCTTTTTCACAAAC 60.483 50.000 0.00 0.00 0.00 2.93
104 105 2.167487 GCAGGACCCTTTTTCACAAACA 59.833 45.455 0.00 0.00 0.00 2.83
105 106 3.368948 GCAGGACCCTTTTTCACAAACAA 60.369 43.478 0.00 0.00 0.00 2.83
106 107 4.432712 CAGGACCCTTTTTCACAAACAAG 58.567 43.478 0.00 0.00 0.00 3.16
107 108 3.450817 AGGACCCTTTTTCACAAACAAGG 59.549 43.478 0.00 0.00 0.00 3.61
108 109 3.431626 GGACCCTTTTTCACAAACAAGGG 60.432 47.826 16.83 16.83 42.58 3.95
109 110 3.445987 ACCCTTTTTCACAAACAAGGGA 58.554 40.909 22.69 0.00 40.58 4.20
110 111 4.037222 ACCCTTTTTCACAAACAAGGGAT 58.963 39.130 22.69 9.15 40.58 3.85
111 112 5.212745 ACCCTTTTTCACAAACAAGGGATA 58.787 37.500 22.69 0.00 40.58 2.59
112 113 5.843969 ACCCTTTTTCACAAACAAGGGATAT 59.156 36.000 22.69 4.23 40.58 1.63
113 114 7.013834 ACCCTTTTTCACAAACAAGGGATATA 58.986 34.615 22.69 0.00 40.58 0.86
114 115 7.678171 ACCCTTTTTCACAAACAAGGGATATAT 59.322 33.333 22.69 3.64 40.58 0.86
115 116 7.981225 CCCTTTTTCACAAACAAGGGATATATG 59.019 37.037 14.31 0.00 40.58 1.78
116 117 7.492344 CCTTTTTCACAAACAAGGGATATATGC 59.508 37.037 0.00 0.00 0.00 3.14
117 118 5.749596 TTCACAAACAAGGGATATATGCG 57.250 39.130 0.00 0.00 0.00 4.73
118 119 3.563808 TCACAAACAAGGGATATATGCGC 59.436 43.478 0.00 0.00 0.00 6.09
119 120 2.548057 ACAAACAAGGGATATATGCGCG 59.452 45.455 0.00 0.00 0.00 6.86
120 121 2.805671 CAAACAAGGGATATATGCGCGA 59.194 45.455 12.10 0.00 0.00 5.87
121 122 3.334583 AACAAGGGATATATGCGCGAT 57.665 42.857 12.10 2.89 0.00 4.58
122 123 3.334583 ACAAGGGATATATGCGCGATT 57.665 42.857 12.10 0.00 0.00 3.34
123 124 4.465632 ACAAGGGATATATGCGCGATTA 57.534 40.909 12.10 0.00 0.00 1.75
124 125 4.827692 ACAAGGGATATATGCGCGATTAA 58.172 39.130 12.10 0.00 0.00 1.40
125 126 4.870426 ACAAGGGATATATGCGCGATTAAG 59.130 41.667 12.10 0.00 0.00 1.85
126 127 4.737855 AGGGATATATGCGCGATTAAGT 57.262 40.909 12.10 0.00 0.00 2.24
127 128 5.847111 AGGGATATATGCGCGATTAAGTA 57.153 39.130 12.10 0.00 0.00 2.24
128 129 6.216801 AGGGATATATGCGCGATTAAGTAA 57.783 37.500 12.10 0.00 0.00 2.24
129 130 6.636705 AGGGATATATGCGCGATTAAGTAAA 58.363 36.000 12.10 0.00 0.00 2.01
130 131 7.101054 AGGGATATATGCGCGATTAAGTAAAA 58.899 34.615 12.10 0.00 0.00 1.52
131 132 7.604927 AGGGATATATGCGCGATTAAGTAAAAA 59.395 33.333 12.10 0.00 0.00 1.94
132 133 7.691050 GGGATATATGCGCGATTAAGTAAAAAC 59.309 37.037 12.10 0.00 0.00 2.43
133 134 8.440833 GGATATATGCGCGATTAAGTAAAAACT 58.559 33.333 12.10 0.00 0.00 2.66
137 138 5.802064 TGCGCGATTAAGTAAAAACTATGG 58.198 37.500 12.10 0.00 0.00 2.74
138 139 5.202640 GCGCGATTAAGTAAAAACTATGGG 58.797 41.667 12.10 0.00 0.00 4.00
139 140 5.220719 GCGCGATTAAGTAAAAACTATGGGT 60.221 40.000 12.10 0.00 0.00 4.51
140 141 6.189567 CGCGATTAAGTAAAAACTATGGGTG 58.810 40.000 0.00 0.00 0.00 4.61
141 142 6.183360 CGCGATTAAGTAAAAACTATGGGTGT 60.183 38.462 0.00 0.00 0.00 4.16
142 143 7.532571 GCGATTAAGTAAAAACTATGGGTGTT 58.467 34.615 0.00 0.00 0.00 3.32
143 144 8.024865 GCGATTAAGTAAAAACTATGGGTGTTT 58.975 33.333 0.00 0.00 38.71 2.83
144 145 9.902196 CGATTAAGTAAAAACTATGGGTGTTTT 57.098 29.630 0.00 0.00 45.82 2.43
163 164 4.612932 TTTTTGCAAAAGAACATGCCAC 57.387 36.364 22.78 0.00 41.87 5.01
164 165 2.975732 TTGCAAAAGAACATGCCACA 57.024 40.000 0.00 0.00 41.87 4.17
165 166 3.472283 TTGCAAAAGAACATGCCACAT 57.528 38.095 0.00 0.00 41.87 3.21
166 167 3.029320 TGCAAAAGAACATGCCACATC 57.971 42.857 0.00 0.00 41.87 3.06
167 168 2.364647 TGCAAAAGAACATGCCACATCA 59.635 40.909 0.00 0.00 41.87 3.07
168 169 2.991190 GCAAAAGAACATGCCACATCAG 59.009 45.455 0.00 0.00 36.56 2.90
169 170 2.991190 CAAAAGAACATGCCACATCAGC 59.009 45.455 0.00 0.00 0.00 4.26
170 171 2.211250 AAGAACATGCCACATCAGCT 57.789 45.000 0.00 0.00 0.00 4.24
171 172 1.460504 AGAACATGCCACATCAGCTG 58.539 50.000 7.63 7.63 0.00 4.24
172 173 0.179145 GAACATGCCACATCAGCTGC 60.179 55.000 9.47 0.00 0.00 5.25
173 174 0.611062 AACATGCCACATCAGCTGCT 60.611 50.000 9.47 0.00 0.00 4.24
174 175 1.313091 ACATGCCACATCAGCTGCTG 61.313 55.000 23.31 23.31 0.00 4.41
175 176 1.029947 CATGCCACATCAGCTGCTGA 61.030 55.000 32.07 32.07 44.99 4.26
176 177 1.030488 ATGCCACATCAGCTGCTGAC 61.030 55.000 32.54 20.14 43.63 3.51
177 178 1.673337 GCCACATCAGCTGCTGACA 60.673 57.895 32.54 13.94 43.63 3.58
178 179 1.645704 GCCACATCAGCTGCTGACAG 61.646 60.000 32.54 27.69 43.63 3.51
179 180 1.025113 CCACATCAGCTGCTGACAGG 61.025 60.000 32.54 27.30 43.63 4.00
180 181 1.376942 ACATCAGCTGCTGACAGGC 60.377 57.895 32.54 0.00 43.63 4.85
181 182 2.125229 ATCAGCTGCTGACAGGCG 60.125 61.111 32.54 4.45 43.63 5.52
182 183 3.677284 ATCAGCTGCTGACAGGCGG 62.677 63.158 32.54 3.66 43.63 6.13
189 190 4.020617 CTGACAGGCGGGCTCCAA 62.021 66.667 0.00 0.00 0.00 3.53
190 191 4.329545 TGACAGGCGGGCTCCAAC 62.330 66.667 0.00 0.00 0.00 3.77
200 201 4.126524 GCTCCAACGGCCAGATAC 57.873 61.111 2.24 0.00 0.00 2.24
201 202 1.220749 GCTCCAACGGCCAGATACA 59.779 57.895 2.24 0.00 0.00 2.29
202 203 0.811616 GCTCCAACGGCCAGATACAG 60.812 60.000 2.24 0.00 0.00 2.74
203 204 0.811616 CTCCAACGGCCAGATACAGC 60.812 60.000 2.24 0.00 0.00 4.40
204 205 2.173669 CCAACGGCCAGATACAGCG 61.174 63.158 2.24 0.00 0.00 5.18
205 206 1.447838 CAACGGCCAGATACAGCGT 60.448 57.895 2.24 0.00 0.00 5.07
206 207 1.153628 AACGGCCAGATACAGCGTC 60.154 57.895 2.24 0.00 0.00 5.19
207 208 1.884075 AACGGCCAGATACAGCGTCA 61.884 55.000 2.24 0.00 0.00 4.35
208 209 1.153647 CGGCCAGATACAGCGTCAA 60.154 57.895 2.24 0.00 0.00 3.18
209 210 0.530650 CGGCCAGATACAGCGTCAAT 60.531 55.000 2.24 0.00 0.00 2.57
210 211 1.269569 CGGCCAGATACAGCGTCAATA 60.270 52.381 2.24 0.00 0.00 1.90
211 212 2.135933 GGCCAGATACAGCGTCAATAC 58.864 52.381 0.00 0.00 0.00 1.89
212 213 2.483013 GGCCAGATACAGCGTCAATACA 60.483 50.000 0.00 0.00 0.00 2.29
213 214 2.540101 GCCAGATACAGCGTCAATACAC 59.460 50.000 0.00 0.00 0.00 2.90
214 215 3.738281 GCCAGATACAGCGTCAATACACT 60.738 47.826 0.00 0.00 0.00 3.55
215 216 3.798878 CCAGATACAGCGTCAATACACTG 59.201 47.826 0.00 0.00 40.82 3.66
217 218 4.864806 CAGATACAGCGTCAATACACTGTT 59.135 41.667 4.70 0.00 44.61 3.16
218 219 6.033966 CAGATACAGCGTCAATACACTGTTA 58.966 40.000 4.70 0.00 44.61 2.41
219 220 6.697455 CAGATACAGCGTCAATACACTGTTAT 59.303 38.462 4.70 0.00 44.61 1.89
220 221 7.860872 CAGATACAGCGTCAATACACTGTTATA 59.139 37.037 4.70 0.00 44.61 0.98
221 222 7.861372 AGATACAGCGTCAATACACTGTTATAC 59.139 37.037 4.70 0.00 44.61 1.47
222 223 4.796830 ACAGCGTCAATACACTGTTATACG 59.203 41.667 0.00 0.00 44.61 3.06
223 224 4.098532 GCGTCAATACACTGTTATACGC 57.901 45.455 12.29 12.29 46.01 4.42
225 226 5.297443 CGTCAATACACTGTTATACGCAG 57.703 43.478 2.82 2.82 39.67 5.18
226 227 4.796830 CGTCAATACACTGTTATACGCAGT 59.203 41.667 3.92 3.92 46.86 4.40
227 228 5.287752 CGTCAATACACTGTTATACGCAGTT 59.712 40.000 6.44 3.11 43.87 3.16
228 229 6.183360 CGTCAATACACTGTTATACGCAGTTT 60.183 38.462 6.44 4.21 43.87 2.66
229 230 7.008538 CGTCAATACACTGTTATACGCAGTTTA 59.991 37.037 6.44 5.92 43.87 2.01
230 231 8.318876 GTCAATACACTGTTATACGCAGTTTAG 58.681 37.037 6.44 0.70 43.87 1.85
231 232 8.245491 TCAATACACTGTTATACGCAGTTTAGA 58.755 33.333 6.44 0.00 43.87 2.10
232 233 7.982371 ATACACTGTTATACGCAGTTTAGAC 57.018 36.000 6.44 0.00 43.87 2.59
233 234 5.166398 ACACTGTTATACGCAGTTTAGACC 58.834 41.667 6.44 0.00 43.87 3.85
234 235 5.165676 CACTGTTATACGCAGTTTAGACCA 58.834 41.667 6.44 0.00 43.87 4.02
235 236 5.636121 CACTGTTATACGCAGTTTAGACCAA 59.364 40.000 6.44 0.00 43.87 3.67
236 237 6.146510 CACTGTTATACGCAGTTTAGACCAAA 59.853 38.462 6.44 0.00 43.87 3.28
237 238 6.877322 ACTGTTATACGCAGTTTAGACCAAAT 59.123 34.615 3.92 0.00 43.87 2.32
238 239 7.389607 ACTGTTATACGCAGTTTAGACCAAATT 59.610 33.333 3.92 0.00 43.87 1.82
239 240 7.523219 TGTTATACGCAGTTTAGACCAAATTG 58.477 34.615 0.00 0.00 37.78 2.32
240 241 7.173562 TGTTATACGCAGTTTAGACCAAATTGT 59.826 33.333 0.00 0.00 37.78 2.71
241 242 8.658609 GTTATACGCAGTTTAGACCAAATTGTA 58.341 33.333 0.00 0.00 37.78 2.41
242 243 7.675962 ATACGCAGTTTAGACCAAATTGTAA 57.324 32.000 0.00 0.00 37.78 2.41
243 244 5.754778 ACGCAGTTTAGACCAAATTGTAAC 58.245 37.500 0.00 0.00 37.78 2.50
244 245 5.297278 ACGCAGTTTAGACCAAATTGTAACA 59.703 36.000 0.00 0.00 37.78 2.41
245 246 5.851177 CGCAGTTTAGACCAAATTGTAACAG 59.149 40.000 0.00 0.00 36.50 3.16
246 247 6.293190 CGCAGTTTAGACCAAATTGTAACAGA 60.293 38.462 0.00 0.00 36.50 3.41
247 248 6.856426 GCAGTTTAGACCAAATTGTAACAGAC 59.144 38.462 0.00 0.00 36.50 3.51
248 249 7.255139 GCAGTTTAGACCAAATTGTAACAGACT 60.255 37.037 0.00 0.00 36.50 3.24
249 250 8.070171 CAGTTTAGACCAAATTGTAACAGACTG 58.930 37.037 0.00 0.00 31.15 3.51
250 251 7.773690 AGTTTAGACCAAATTGTAACAGACTGT 59.226 33.333 1.07 1.07 0.00 3.55
251 252 7.724305 TTAGACCAAATTGTAACAGACTGTC 57.276 36.000 8.93 0.00 0.00 3.51
252 253 5.063880 AGACCAAATTGTAACAGACTGTCC 58.936 41.667 8.93 3.46 0.00 4.02
253 254 4.142038 ACCAAATTGTAACAGACTGTCCC 58.858 43.478 8.93 3.09 0.00 4.46
254 255 4.141287 CCAAATTGTAACAGACTGTCCCA 58.859 43.478 8.93 5.83 0.00 4.37
255 256 4.216257 CCAAATTGTAACAGACTGTCCCAG 59.784 45.833 8.93 0.00 37.52 4.45
256 257 4.974645 AATTGTAACAGACTGTCCCAGA 57.025 40.909 8.93 1.29 35.18 3.86
257 258 3.746045 TTGTAACAGACTGTCCCAGAC 57.254 47.619 8.93 3.48 35.18 3.51
258 259 2.673258 TGTAACAGACTGTCCCAGACA 58.327 47.619 8.93 5.94 40.50 3.41
259 260 3.239449 TGTAACAGACTGTCCCAGACAT 58.761 45.455 8.93 0.00 41.94 3.06
260 261 2.847327 AACAGACTGTCCCAGACATG 57.153 50.000 8.93 0.00 41.94 3.21
262 263 0.979665 CAGACTGTCCCAGACATGGT 59.020 55.000 3.76 0.00 46.10 3.55
263 264 2.179427 CAGACTGTCCCAGACATGGTA 58.821 52.381 3.76 0.00 46.10 3.25
264 265 2.093973 CAGACTGTCCCAGACATGGTAC 60.094 54.545 3.76 0.00 46.10 3.34
265 266 2.180276 GACTGTCCCAGACATGGTACT 58.820 52.381 0.00 0.00 46.10 2.73
266 267 1.902508 ACTGTCCCAGACATGGTACTG 59.097 52.381 0.00 3.84 46.10 2.74
267 268 2.179427 CTGTCCCAGACATGGTACTGA 58.821 52.381 15.06 0.00 46.10 3.41
268 269 1.899814 TGTCCCAGACATGGTACTGAC 59.100 52.381 15.06 8.55 46.10 3.51
269 270 1.135083 GTCCCAGACATGGTACTGACG 60.135 57.143 15.06 7.51 46.10 4.35
270 271 0.895530 CCCAGACATGGTACTGACGT 59.104 55.000 15.06 0.00 46.10 4.34
271 272 1.404181 CCCAGACATGGTACTGACGTG 60.404 57.143 15.06 0.00 46.10 4.49
272 273 1.350193 CAGACATGGTACTGACGTGC 58.650 55.000 0.00 0.00 36.38 5.34
273 274 0.966179 AGACATGGTACTGACGTGCA 59.034 50.000 0.00 0.00 0.00 4.57
274 275 1.343142 AGACATGGTACTGACGTGCAA 59.657 47.619 0.00 0.00 0.00 4.08
275 276 2.139917 GACATGGTACTGACGTGCAAA 58.860 47.619 0.00 0.00 0.00 3.68
276 277 2.546368 GACATGGTACTGACGTGCAAAA 59.454 45.455 0.00 0.00 0.00 2.44
277 278 2.946329 ACATGGTACTGACGTGCAAAAA 59.054 40.909 0.00 0.00 0.00 1.94
299 300 7.923414 AAAAACTGAATAGTGGTACTGATCC 57.077 36.000 0.00 0.00 37.19 3.36
300 301 4.920640 ACTGAATAGTGGTACTGATCCG 57.079 45.455 0.00 0.00 35.34 4.18
301 302 4.279145 ACTGAATAGTGGTACTGATCCGT 58.721 43.478 0.00 0.00 35.34 4.69
302 303 4.338682 ACTGAATAGTGGTACTGATCCGTC 59.661 45.833 0.00 0.00 35.34 4.79
303 304 4.274978 TGAATAGTGGTACTGATCCGTCA 58.725 43.478 0.00 0.00 0.00 4.35
304 305 4.097437 TGAATAGTGGTACTGATCCGTCAC 59.903 45.833 0.00 0.00 0.00 3.67
305 306 1.919240 AGTGGTACTGATCCGTCACA 58.081 50.000 10.38 2.03 0.00 3.58
306 307 1.544691 AGTGGTACTGATCCGTCACAC 59.455 52.381 13.04 13.04 31.38 3.82
307 308 0.892755 TGGTACTGATCCGTCACACC 59.107 55.000 0.00 0.00 35.96 4.16
308 309 1.183549 GGTACTGATCCGTCACACCT 58.816 55.000 0.00 0.00 34.04 4.00
309 310 1.135083 GGTACTGATCCGTCACACCTG 60.135 57.143 0.00 0.00 34.04 4.00
310 311 0.530744 TACTGATCCGTCACACCTGC 59.469 55.000 0.00 0.00 0.00 4.85
311 312 1.448540 CTGATCCGTCACACCTGCC 60.449 63.158 0.00 0.00 0.00 4.85
312 313 1.892819 CTGATCCGTCACACCTGCCT 61.893 60.000 0.00 0.00 0.00 4.75
313 314 1.153549 GATCCGTCACACCTGCCTC 60.154 63.158 0.00 0.00 0.00 4.70
314 315 1.888436 GATCCGTCACACCTGCCTCA 61.888 60.000 0.00 0.00 0.00 3.86
315 316 1.480212 ATCCGTCACACCTGCCTCAA 61.480 55.000 0.00 0.00 0.00 3.02
316 317 1.227823 CCGTCACACCTGCCTCAAA 60.228 57.895 0.00 0.00 0.00 2.69
317 318 0.606401 CCGTCACACCTGCCTCAAAT 60.606 55.000 0.00 0.00 0.00 2.32
318 319 0.518636 CGTCACACCTGCCTCAAATG 59.481 55.000 0.00 0.00 0.00 2.32
319 320 1.609208 GTCACACCTGCCTCAAATGT 58.391 50.000 0.00 0.00 0.00 2.71
320 321 2.778299 GTCACACCTGCCTCAAATGTA 58.222 47.619 0.00 0.00 0.00 2.29
321 322 2.744202 GTCACACCTGCCTCAAATGTAG 59.256 50.000 0.00 0.00 0.00 2.74
322 323 2.371841 TCACACCTGCCTCAAATGTAGT 59.628 45.455 0.00 0.00 0.00 2.73
323 324 3.580895 TCACACCTGCCTCAAATGTAGTA 59.419 43.478 0.00 0.00 0.00 1.82
324 325 3.684788 CACACCTGCCTCAAATGTAGTAC 59.315 47.826 0.00 0.00 0.00 2.73
325 326 3.583086 ACACCTGCCTCAAATGTAGTACT 59.417 43.478 0.00 0.00 0.00 2.73
326 327 4.041691 ACACCTGCCTCAAATGTAGTACTT 59.958 41.667 0.00 0.00 0.00 2.24
327 328 4.631813 CACCTGCCTCAAATGTAGTACTTC 59.368 45.833 0.00 0.00 0.00 3.01
328 329 4.192317 CCTGCCTCAAATGTAGTACTTCC 58.808 47.826 0.00 0.00 0.00 3.46
329 330 3.857052 TGCCTCAAATGTAGTACTTCCG 58.143 45.455 0.00 0.00 0.00 4.30
330 331 3.259876 TGCCTCAAATGTAGTACTTCCGT 59.740 43.478 0.00 0.00 0.00 4.69
331 332 3.617263 GCCTCAAATGTAGTACTTCCGTG 59.383 47.826 0.00 0.00 0.00 4.94
332 333 4.817517 CCTCAAATGTAGTACTTCCGTGT 58.182 43.478 0.00 0.00 0.00 4.49
333 334 5.622914 GCCTCAAATGTAGTACTTCCGTGTA 60.623 44.000 0.00 0.00 0.00 2.90
334 335 6.392354 CCTCAAATGTAGTACTTCCGTGTAA 58.608 40.000 0.00 0.00 0.00 2.41
335 336 7.039882 CCTCAAATGTAGTACTTCCGTGTAAT 58.960 38.462 0.00 0.00 0.00 1.89
336 337 7.548075 CCTCAAATGTAGTACTTCCGTGTAATT 59.452 37.037 0.00 0.00 0.00 1.40
337 338 9.577110 CTCAAATGTAGTACTTCCGTGTAATTA 57.423 33.333 0.00 0.00 0.00 1.40
338 339 9.926158 TCAAATGTAGTACTTCCGTGTAATTAA 57.074 29.630 0.00 0.00 0.00 1.40
339 340 9.962759 CAAATGTAGTACTTCCGTGTAATTAAC 57.037 33.333 0.00 0.00 0.00 2.01
340 341 9.933723 AAATGTAGTACTTCCGTGTAATTAACT 57.066 29.630 0.00 0.00 0.00 2.24
341 342 9.578439 AATGTAGTACTTCCGTGTAATTAACTC 57.422 33.333 0.00 0.00 0.00 3.01
342 343 7.538575 TGTAGTACTTCCGTGTAATTAACTCC 58.461 38.462 0.00 0.00 0.00 3.85
343 344 6.847421 AGTACTTCCGTGTAATTAACTCCT 57.153 37.500 0.00 0.00 0.00 3.69
344 345 7.237209 AGTACTTCCGTGTAATTAACTCCTT 57.763 36.000 0.00 0.00 0.00 3.36
345 346 7.674120 AGTACTTCCGTGTAATTAACTCCTTT 58.326 34.615 0.00 0.00 0.00 3.11
346 347 8.152898 AGTACTTCCGTGTAATTAACTCCTTTT 58.847 33.333 0.00 0.00 0.00 2.27
347 348 7.812690 ACTTCCGTGTAATTAACTCCTTTTT 57.187 32.000 0.00 0.00 0.00 1.94
369 370 8.401955 TTTTTACCCTACTCCCTGAAGATATT 57.598 34.615 0.00 0.00 0.00 1.28
370 371 8.401955 TTTTACCCTACTCCCTGAAGATATTT 57.598 34.615 0.00 0.00 0.00 1.40
371 372 5.896073 ACCCTACTCCCTGAAGATATTTG 57.104 43.478 0.00 0.00 0.00 2.32
372 373 5.538877 ACCCTACTCCCTGAAGATATTTGA 58.461 41.667 0.00 0.00 0.00 2.69
373 374 5.604650 ACCCTACTCCCTGAAGATATTTGAG 59.395 44.000 0.00 0.00 0.00 3.02
374 375 5.604650 CCCTACTCCCTGAAGATATTTGAGT 59.395 44.000 0.00 0.00 35.85 3.41
375 376 6.782988 CCCTACTCCCTGAAGATATTTGAGTA 59.217 42.308 0.00 0.00 33.89 2.59
376 377 7.039363 CCCTACTCCCTGAAGATATTTGAGTAG 60.039 44.444 13.98 13.98 45.14 2.57
377 378 7.726291 CCTACTCCCTGAAGATATTTGAGTAGA 59.274 40.741 19.84 2.92 46.99 2.59
652 653 3.125520 GGCAGGACCCTTTTTCACA 57.874 52.632 0.00 0.00 0.00 3.58
653 654 1.408969 GGCAGGACCCTTTTTCACAA 58.591 50.000 0.00 0.00 0.00 3.33
654 655 1.760029 GGCAGGACCCTTTTTCACAAA 59.240 47.619 0.00 0.00 0.00 2.83
655 656 2.483013 GGCAGGACCCTTTTTCACAAAC 60.483 50.000 0.00 0.00 0.00 2.93
656 657 2.167487 GCAGGACCCTTTTTCACAAACA 59.833 45.455 0.00 0.00 0.00 2.83
657 658 3.368948 GCAGGACCCTTTTTCACAAACAA 60.369 43.478 0.00 0.00 0.00 2.83
658 659 4.432712 CAGGACCCTTTTTCACAAACAAG 58.567 43.478 0.00 0.00 0.00 3.16
659 660 3.450817 AGGACCCTTTTTCACAAACAAGG 59.549 43.478 0.00 0.00 0.00 3.61
660 661 3.431626 GGACCCTTTTTCACAAACAAGGG 60.432 47.826 16.83 16.83 42.58 3.95
661 662 3.445987 ACCCTTTTTCACAAACAAGGGA 58.554 40.909 22.69 0.00 40.58 4.20
662 663 4.037222 ACCCTTTTTCACAAACAAGGGAT 58.963 39.130 22.69 9.15 40.58 3.85
663 664 5.212745 ACCCTTTTTCACAAACAAGGGATA 58.787 37.500 22.69 0.00 40.58 2.59
664 665 5.843969 ACCCTTTTTCACAAACAAGGGATAT 59.156 36.000 22.69 4.23 40.58 1.63
665 666 7.013834 ACCCTTTTTCACAAACAAGGGATATA 58.986 34.615 22.69 0.00 40.58 0.86
666 667 7.678171 ACCCTTTTTCACAAACAAGGGATATAT 59.322 33.333 22.69 3.64 40.58 0.86
667 668 7.981225 CCCTTTTTCACAAACAAGGGATATATG 59.019 37.037 14.31 0.00 40.58 1.78
668 669 7.492344 CCTTTTTCACAAACAAGGGATATATGC 59.508 37.037 0.00 0.00 0.00 3.14
669 670 5.749596 TTCACAAACAAGGGATATATGCG 57.250 39.130 0.00 0.00 0.00 4.73
670 671 3.563808 TCACAAACAAGGGATATATGCGC 59.436 43.478 0.00 0.00 0.00 6.09
671 672 2.548057 ACAAACAAGGGATATATGCGCG 59.452 45.455 0.00 0.00 0.00 6.86
672 673 2.805671 CAAACAAGGGATATATGCGCGA 59.194 45.455 12.10 0.00 0.00 5.87
673 674 3.334583 AACAAGGGATATATGCGCGAT 57.665 42.857 12.10 2.89 0.00 4.58
674 675 3.334583 ACAAGGGATATATGCGCGATT 57.665 42.857 12.10 0.00 0.00 3.34
675 676 4.465632 ACAAGGGATATATGCGCGATTA 57.534 40.909 12.10 0.00 0.00 1.75
676 677 4.827692 ACAAGGGATATATGCGCGATTAA 58.172 39.130 12.10 0.00 0.00 1.40
677 678 4.870426 ACAAGGGATATATGCGCGATTAAG 59.130 41.667 12.10 0.00 0.00 1.85
678 679 4.737855 AGGGATATATGCGCGATTAAGT 57.262 40.909 12.10 0.00 0.00 2.24
679 680 5.847111 AGGGATATATGCGCGATTAAGTA 57.153 39.130 12.10 0.00 0.00 2.24
680 681 6.216801 AGGGATATATGCGCGATTAAGTAA 57.783 37.500 12.10 0.00 0.00 2.24
681 682 6.636705 AGGGATATATGCGCGATTAAGTAAA 58.363 36.000 12.10 0.00 0.00 2.01
682 683 7.101054 AGGGATATATGCGCGATTAAGTAAAA 58.899 34.615 12.10 0.00 0.00 1.52
683 684 7.604927 AGGGATATATGCGCGATTAAGTAAAAA 59.395 33.333 12.10 0.00 0.00 1.94
684 685 7.691050 GGGATATATGCGCGATTAAGTAAAAAC 59.309 37.037 12.10 0.00 0.00 2.43
685 686 8.440833 GGATATATGCGCGATTAAGTAAAAACT 58.559 33.333 12.10 0.00 0.00 2.66
689 690 5.802064 TGCGCGATTAAGTAAAAACTATGG 58.198 37.500 12.10 0.00 0.00 2.74
690 691 5.202640 GCGCGATTAAGTAAAAACTATGGG 58.797 41.667 12.10 0.00 0.00 4.00
691 692 5.220719 GCGCGATTAAGTAAAAACTATGGGT 60.221 40.000 12.10 0.00 0.00 4.51
692 693 6.189567 CGCGATTAAGTAAAAACTATGGGTG 58.810 40.000 0.00 0.00 0.00 4.61
693 694 6.183360 CGCGATTAAGTAAAAACTATGGGTGT 60.183 38.462 0.00 0.00 0.00 4.16
694 695 7.532571 GCGATTAAGTAAAAACTATGGGTGTT 58.467 34.615 0.00 0.00 0.00 3.32
695 696 8.024865 GCGATTAAGTAAAAACTATGGGTGTTT 58.975 33.333 0.00 0.00 38.71 2.83
696 697 9.902196 CGATTAAGTAAAAACTATGGGTGTTTT 57.098 29.630 0.00 0.00 45.82 2.43
715 716 4.612932 TTTTTGCAAAAGAACATGCCAC 57.387 36.364 22.78 0.00 41.87 5.01
716 717 2.975732 TTGCAAAAGAACATGCCACA 57.024 40.000 0.00 0.00 41.87 4.17
717 718 3.472283 TTGCAAAAGAACATGCCACAT 57.528 38.095 0.00 0.00 41.87 3.21
718 719 3.029320 TGCAAAAGAACATGCCACATC 57.971 42.857 0.00 0.00 41.87 3.06
719 720 2.364647 TGCAAAAGAACATGCCACATCA 59.635 40.909 0.00 0.00 41.87 3.07
720 721 2.991190 GCAAAAGAACATGCCACATCAG 59.009 45.455 0.00 0.00 36.56 2.90
721 722 2.991190 CAAAAGAACATGCCACATCAGC 59.009 45.455 0.00 0.00 0.00 4.26
722 723 2.211250 AAGAACATGCCACATCAGCT 57.789 45.000 0.00 0.00 0.00 4.24
723 724 1.460504 AGAACATGCCACATCAGCTG 58.539 50.000 7.63 7.63 0.00 4.24
724 725 0.179145 GAACATGCCACATCAGCTGC 60.179 55.000 9.47 0.00 0.00 5.25
725 726 0.611062 AACATGCCACATCAGCTGCT 60.611 50.000 9.47 0.00 0.00 4.24
726 727 1.313091 ACATGCCACATCAGCTGCTG 61.313 55.000 23.31 23.31 0.00 4.41
727 728 1.029947 CATGCCACATCAGCTGCTGA 61.030 55.000 32.07 32.07 44.99 4.26
728 729 1.030488 ATGCCACATCAGCTGCTGAC 61.030 55.000 32.54 20.14 43.63 3.51
729 730 1.673337 GCCACATCAGCTGCTGACA 60.673 57.895 32.54 13.94 43.63 3.58
730 731 1.645704 GCCACATCAGCTGCTGACAG 61.646 60.000 32.54 27.69 43.63 3.51
731 732 1.025113 CCACATCAGCTGCTGACAGG 61.025 60.000 32.54 27.30 43.63 4.00
732 733 1.376942 ACATCAGCTGCTGACAGGC 60.377 57.895 32.54 0.00 43.63 4.85
733 734 2.125229 ATCAGCTGCTGACAGGCG 60.125 61.111 32.54 4.45 43.63 5.52
734 735 3.677284 ATCAGCTGCTGACAGGCGG 62.677 63.158 32.54 3.66 43.63 6.13
741 742 4.020617 CTGACAGGCGGGCTCCAA 62.021 66.667 0.00 0.00 0.00 3.53
742 743 4.329545 TGACAGGCGGGCTCCAAC 62.330 66.667 0.00 0.00 0.00 3.77
752 753 4.126524 GCTCCAACGGCCAGATAC 57.873 61.111 2.24 0.00 0.00 2.24
753 754 1.220749 GCTCCAACGGCCAGATACA 59.779 57.895 2.24 0.00 0.00 2.29
754 755 0.811616 GCTCCAACGGCCAGATACAG 60.812 60.000 2.24 0.00 0.00 2.74
755 756 0.811616 CTCCAACGGCCAGATACAGC 60.812 60.000 2.24 0.00 0.00 4.40
756 757 2.173669 CCAACGGCCAGATACAGCG 61.174 63.158 2.24 0.00 0.00 5.18
757 758 1.447838 CAACGGCCAGATACAGCGT 60.448 57.895 2.24 0.00 0.00 5.07
758 759 1.153628 AACGGCCAGATACAGCGTC 60.154 57.895 2.24 0.00 0.00 5.19
759 760 1.884075 AACGGCCAGATACAGCGTCA 61.884 55.000 2.24 0.00 0.00 4.35
760 761 1.153647 CGGCCAGATACAGCGTCAA 60.154 57.895 2.24 0.00 0.00 3.18
761 762 0.530650 CGGCCAGATACAGCGTCAAT 60.531 55.000 2.24 0.00 0.00 2.57
762 763 1.269569 CGGCCAGATACAGCGTCAATA 60.270 52.381 2.24 0.00 0.00 1.90
763 764 2.135933 GGCCAGATACAGCGTCAATAC 58.864 52.381 0.00 0.00 0.00 1.89
764 765 2.483013 GGCCAGATACAGCGTCAATACA 60.483 50.000 0.00 0.00 0.00 2.29
765 766 2.540101 GCCAGATACAGCGTCAATACAC 59.460 50.000 0.00 0.00 0.00 2.90
766 767 3.738281 GCCAGATACAGCGTCAATACACT 60.738 47.826 0.00 0.00 0.00 3.55
767 768 3.798878 CCAGATACAGCGTCAATACACTG 59.201 47.826 0.00 0.00 40.82 3.66
769 770 4.864806 CAGATACAGCGTCAATACACTGTT 59.135 41.667 4.70 0.00 44.61 3.16
770 771 6.033966 CAGATACAGCGTCAATACACTGTTA 58.966 40.000 4.70 0.00 44.61 2.41
771 772 6.697455 CAGATACAGCGTCAATACACTGTTAT 59.303 38.462 4.70 0.00 44.61 1.89
772 773 7.860872 CAGATACAGCGTCAATACACTGTTATA 59.139 37.037 4.70 0.00 44.61 0.98
773 774 7.861372 AGATACAGCGTCAATACACTGTTATAC 59.139 37.037 4.70 0.00 44.61 1.47
774 775 4.796830 ACAGCGTCAATACACTGTTATACG 59.203 41.667 0.00 0.00 44.61 3.06
775 776 4.098532 GCGTCAATACACTGTTATACGC 57.901 45.455 12.29 12.29 46.01 4.42
777 778 5.297443 CGTCAATACACTGTTATACGCAG 57.703 43.478 2.82 2.82 39.67 5.18
778 779 4.796830 CGTCAATACACTGTTATACGCAGT 59.203 41.667 3.92 3.92 46.86 4.40
779 780 5.287752 CGTCAATACACTGTTATACGCAGTT 59.712 40.000 6.44 3.11 43.87 3.16
780 781 6.183360 CGTCAATACACTGTTATACGCAGTTT 60.183 38.462 6.44 4.21 43.87 2.66
781 782 7.008538 CGTCAATACACTGTTATACGCAGTTTA 59.991 37.037 6.44 5.92 43.87 2.01
782 783 8.318876 GTCAATACACTGTTATACGCAGTTTAG 58.681 37.037 6.44 0.70 43.87 1.85
783 784 8.245491 TCAATACACTGTTATACGCAGTTTAGA 58.755 33.333 6.44 0.00 43.87 2.10
784 785 7.982371 ATACACTGTTATACGCAGTTTAGAC 57.018 36.000 6.44 0.00 43.87 2.59
785 786 5.166398 ACACTGTTATACGCAGTTTAGACC 58.834 41.667 6.44 0.00 43.87 3.85
786 787 5.165676 CACTGTTATACGCAGTTTAGACCA 58.834 41.667 6.44 0.00 43.87 4.02
787 788 5.636121 CACTGTTATACGCAGTTTAGACCAA 59.364 40.000 6.44 0.00 43.87 3.67
788 789 6.146510 CACTGTTATACGCAGTTTAGACCAAA 59.853 38.462 6.44 0.00 43.87 3.28
789 790 6.877322 ACTGTTATACGCAGTTTAGACCAAAT 59.123 34.615 3.92 0.00 43.87 2.32
790 791 7.389607 ACTGTTATACGCAGTTTAGACCAAATT 59.610 33.333 3.92 0.00 43.87 1.82
791 792 7.523219 TGTTATACGCAGTTTAGACCAAATTG 58.477 34.615 0.00 0.00 37.78 2.32
792 793 7.173562 TGTTATACGCAGTTTAGACCAAATTGT 59.826 33.333 0.00 0.00 37.78 2.71
793 794 8.658609 GTTATACGCAGTTTAGACCAAATTGTA 58.341 33.333 0.00 0.00 37.78 2.41
794 795 7.675962 ATACGCAGTTTAGACCAAATTGTAA 57.324 32.000 0.00 0.00 37.78 2.41
795 796 5.754778 ACGCAGTTTAGACCAAATTGTAAC 58.245 37.500 0.00 0.00 37.78 2.50
796 797 5.297278 ACGCAGTTTAGACCAAATTGTAACA 59.703 36.000 0.00 0.00 37.78 2.41
797 798 5.851177 CGCAGTTTAGACCAAATTGTAACAG 59.149 40.000 0.00 0.00 36.50 3.16
798 799 6.293190 CGCAGTTTAGACCAAATTGTAACAGA 60.293 38.462 0.00 0.00 36.50 3.41
799 800 6.856426 GCAGTTTAGACCAAATTGTAACAGAC 59.144 38.462 0.00 0.00 36.50 3.51
800 801 7.255139 GCAGTTTAGACCAAATTGTAACAGACT 60.255 37.037 0.00 0.00 36.50 3.24
801 802 8.070171 CAGTTTAGACCAAATTGTAACAGACTG 58.930 37.037 0.00 0.00 31.15 3.51
802 803 7.773690 AGTTTAGACCAAATTGTAACAGACTGT 59.226 33.333 1.07 1.07 0.00 3.55
803 804 7.724305 TTAGACCAAATTGTAACAGACTGTC 57.276 36.000 8.93 0.00 0.00 3.51
804 805 5.930135 AGACCAAATTGTAACAGACTGTCT 58.070 37.500 8.93 4.06 0.00 3.41
805 806 5.992217 AGACCAAATTGTAACAGACTGTCTC 59.008 40.000 8.93 5.85 0.00 3.36
806 807 5.680619 ACCAAATTGTAACAGACTGTCTCA 58.319 37.500 8.93 8.42 0.00 3.27
807 808 5.760253 ACCAAATTGTAACAGACTGTCTCAG 59.240 40.000 8.93 0.14 37.52 3.35
808 809 5.991606 CCAAATTGTAACAGACTGTCTCAGA 59.008 40.000 8.93 3.71 35.18 3.27
809 810 6.073548 CCAAATTGTAACAGACTGTCTCAGAC 60.074 42.308 8.93 0.00 35.18 3.51
810 811 5.791336 ATTGTAACAGACTGTCTCAGACA 57.209 39.130 8.93 7.44 40.50 3.41
811 812 5.791336 TTGTAACAGACTGTCTCAGACAT 57.209 39.130 8.28 0.00 41.94 3.06
812 813 5.126396 TGTAACAGACTGTCTCAGACATG 57.874 43.478 8.28 6.65 41.94 3.21
813 814 3.674528 AACAGACTGTCTCAGACATGG 57.325 47.619 8.28 0.00 41.94 3.66
814 815 2.603021 ACAGACTGTCTCAGACATGGT 58.397 47.619 8.28 3.35 41.94 3.55
815 816 3.767711 ACAGACTGTCTCAGACATGGTA 58.232 45.455 8.28 0.00 41.94 3.25
816 817 3.508012 ACAGACTGTCTCAGACATGGTAC 59.492 47.826 8.28 0.00 41.94 3.34
817 818 3.761218 CAGACTGTCTCAGACATGGTACT 59.239 47.826 8.28 1.14 41.94 2.73
818 819 3.761218 AGACTGTCTCAGACATGGTACTG 59.239 47.826 8.28 0.00 41.94 2.74
819 820 3.759086 GACTGTCTCAGACATGGTACTGA 59.241 47.826 8.28 15.10 41.94 3.41
820 821 3.508012 ACTGTCTCAGACATGGTACTGAC 59.492 47.826 8.28 8.68 41.94 3.51
821 822 2.488153 TGTCTCAGACATGGTACTGACG 59.512 50.000 2.36 10.38 37.67 4.35
822 823 2.488545 GTCTCAGACATGGTACTGACGT 59.511 50.000 0.00 0.00 38.08 4.34
823 824 2.488153 TCTCAGACATGGTACTGACGTG 59.512 50.000 12.95 6.75 38.08 4.49
824 825 1.067846 TCAGACATGGTACTGACGTGC 60.068 52.381 12.95 0.00 38.08 5.34
825 826 0.966179 AGACATGGTACTGACGTGCA 59.034 50.000 0.00 0.00 0.00 4.57
826 827 1.343142 AGACATGGTACTGACGTGCAA 59.657 47.619 0.00 0.00 0.00 4.08
827 828 2.139917 GACATGGTACTGACGTGCAAA 58.860 47.619 0.00 0.00 0.00 3.68
828 829 2.546368 GACATGGTACTGACGTGCAAAA 59.454 45.455 0.00 0.00 0.00 2.44
829 830 2.946329 ACATGGTACTGACGTGCAAAAA 59.054 40.909 0.00 0.00 0.00 1.94
851 852 7.923414 AAAAACTGAATAGTGGTACTGATCC 57.077 36.000 0.00 0.00 37.19 3.36
852 853 4.920640 ACTGAATAGTGGTACTGATCCG 57.079 45.455 0.00 0.00 35.34 4.18
853 854 4.279145 ACTGAATAGTGGTACTGATCCGT 58.721 43.478 0.00 0.00 35.34 4.69
854 855 4.338682 ACTGAATAGTGGTACTGATCCGTC 59.661 45.833 0.00 0.00 35.34 4.79
855 856 4.274978 TGAATAGTGGTACTGATCCGTCA 58.725 43.478 0.00 0.00 0.00 4.35
856 857 4.097437 TGAATAGTGGTACTGATCCGTCAC 59.903 45.833 0.00 0.00 0.00 3.67
857 858 1.919240 AGTGGTACTGATCCGTCACA 58.081 50.000 10.38 2.03 0.00 3.58
858 859 1.544691 AGTGGTACTGATCCGTCACAC 59.455 52.381 13.04 13.04 31.38 3.82
859 860 0.892755 TGGTACTGATCCGTCACACC 59.107 55.000 0.00 0.00 35.96 4.16
860 861 1.183549 GGTACTGATCCGTCACACCT 58.816 55.000 0.00 0.00 34.04 4.00
861 862 1.135083 GGTACTGATCCGTCACACCTG 60.135 57.143 0.00 0.00 34.04 4.00
862 863 0.530744 TACTGATCCGTCACACCTGC 59.469 55.000 0.00 0.00 0.00 4.85
863 864 1.448540 CTGATCCGTCACACCTGCC 60.449 63.158 0.00 0.00 0.00 4.85
864 865 1.892819 CTGATCCGTCACACCTGCCT 61.893 60.000 0.00 0.00 0.00 4.75
865 866 1.153549 GATCCGTCACACCTGCCTC 60.154 63.158 0.00 0.00 0.00 4.70
866 867 1.888436 GATCCGTCACACCTGCCTCA 61.888 60.000 0.00 0.00 0.00 3.86
867 868 1.480212 ATCCGTCACACCTGCCTCAA 61.480 55.000 0.00 0.00 0.00 3.02
868 869 1.227823 CCGTCACACCTGCCTCAAA 60.228 57.895 0.00 0.00 0.00 2.69
869 870 0.606401 CCGTCACACCTGCCTCAAAT 60.606 55.000 0.00 0.00 0.00 2.32
870 871 0.518636 CGTCACACCTGCCTCAAATG 59.481 55.000 0.00 0.00 0.00 2.32
871 872 1.609208 GTCACACCTGCCTCAAATGT 58.391 50.000 0.00 0.00 0.00 2.71
872 873 2.778299 GTCACACCTGCCTCAAATGTA 58.222 47.619 0.00 0.00 0.00 2.29
873 874 2.744202 GTCACACCTGCCTCAAATGTAG 59.256 50.000 0.00 0.00 0.00 2.74
874 875 2.371841 TCACACCTGCCTCAAATGTAGT 59.628 45.455 0.00 0.00 0.00 2.73
875 876 3.580895 TCACACCTGCCTCAAATGTAGTA 59.419 43.478 0.00 0.00 0.00 1.82
876 877 3.684788 CACACCTGCCTCAAATGTAGTAC 59.315 47.826 0.00 0.00 0.00 2.73
877 878 3.583086 ACACCTGCCTCAAATGTAGTACT 59.417 43.478 0.00 0.00 0.00 2.73
878 879 4.041691 ACACCTGCCTCAAATGTAGTACTT 59.958 41.667 0.00 0.00 0.00 2.24
879 880 4.631813 CACCTGCCTCAAATGTAGTACTTC 59.368 45.833 0.00 0.00 0.00 3.01
880 881 4.192317 CCTGCCTCAAATGTAGTACTTCC 58.808 47.826 0.00 0.00 0.00 3.46
881 882 3.857052 TGCCTCAAATGTAGTACTTCCG 58.143 45.455 0.00 0.00 0.00 4.30
882 883 3.259876 TGCCTCAAATGTAGTACTTCCGT 59.740 43.478 0.00 0.00 0.00 4.69
883 884 3.617263 GCCTCAAATGTAGTACTTCCGTG 59.383 47.826 0.00 0.00 0.00 4.94
884 885 4.817517 CCTCAAATGTAGTACTTCCGTGT 58.182 43.478 0.00 0.00 0.00 4.49
885 886 5.622914 GCCTCAAATGTAGTACTTCCGTGTA 60.623 44.000 0.00 0.00 0.00 2.90
886 887 6.392354 CCTCAAATGTAGTACTTCCGTGTAA 58.608 40.000 0.00 0.00 0.00 2.41
887 888 7.039882 CCTCAAATGTAGTACTTCCGTGTAAT 58.960 38.462 0.00 0.00 0.00 1.89
888 889 7.548075 CCTCAAATGTAGTACTTCCGTGTAATT 59.452 37.037 0.00 0.00 0.00 1.40
889 890 9.577110 CTCAAATGTAGTACTTCCGTGTAATTA 57.423 33.333 0.00 0.00 0.00 1.40
890 891 9.926158 TCAAATGTAGTACTTCCGTGTAATTAA 57.074 29.630 0.00 0.00 0.00 1.40
891 892 9.962759 CAAATGTAGTACTTCCGTGTAATTAAC 57.037 33.333 0.00 0.00 0.00 2.01
892 893 9.933723 AAATGTAGTACTTCCGTGTAATTAACT 57.066 29.630 0.00 0.00 0.00 2.24
893 894 9.578439 AATGTAGTACTTCCGTGTAATTAACTC 57.422 33.333 0.00 0.00 0.00 3.01
1125 1129 1.815421 CCACAGGCAGTACCGCATC 60.815 63.158 3.01 0.00 46.52 3.91
1185 1189 4.701765 CCTTGTTCTCATCAGATACCAGG 58.298 47.826 0.00 0.00 0.00 4.45
1304 1308 1.523758 GGATCCAATATCCGTGTGCC 58.476 55.000 6.95 0.00 0.00 5.01
1350 1354 2.270297 AAATCAATCCGCCGCTGCAC 62.270 55.000 0.00 0.00 37.32 4.57
1488 1492 5.191522 TGTTGATAGATGGATCCTGGACAAA 59.808 40.000 14.23 0.00 0.00 2.83
1510 1520 1.203052 CAATTTCGCTGCAGGATGGTT 59.797 47.619 17.12 4.14 35.86 3.67
1721 1734 6.238842 CCTTCATTGGTATGCAATAAGGTGAG 60.239 42.308 0.00 0.00 0.00 3.51
1855 1871 7.147932 TGGTCATTTGTGTAACCCAATCATATG 60.148 37.037 0.00 0.00 34.36 1.78
1879 1903 6.017687 TGTCATTGTAGCTGACATGATATTGC 60.018 38.462 0.00 0.00 45.97 3.56
1986 2014 1.550524 TGGGAACTCAGATGGTTCTCG 59.449 52.381 11.43 0.00 44.48 4.04
2183 2218 9.079833 CAACTTGCAAGATCAGTTTATAATTGG 57.920 33.333 32.50 0.60 0.00 3.16
2322 2358 3.813166 CGACTTGGTACCACAATTGAACT 59.187 43.478 16.04 0.00 0.00 3.01
2709 2751 1.959085 CTTTGGTGATGCGTGCCTT 59.041 52.632 0.00 0.00 0.00 4.35
2714 2756 4.349503 TGATGCGTGCCTTGCCCT 62.350 61.111 0.00 0.00 0.00 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.286354 TACGTGCAACTAACTGCGGC 61.286 55.000 0.00 0.00 45.74 6.53
1 2 0.437295 GTACGTGCAACTAACTGCGG 59.563 55.000 0.00 0.00 45.74 5.69
2 3 0.090676 CGTACGTGCAACTAACTGCG 59.909 55.000 7.22 0.00 45.74 5.18
3 4 0.437295 CCGTACGTGCAACTAACTGC 59.563 55.000 15.21 0.00 42.95 4.40
4 5 0.437295 GCCGTACGTGCAACTAACTG 59.563 55.000 19.50 0.49 31.75 3.16
5 6 0.032403 TGCCGTACGTGCAACTAACT 59.968 50.000 23.20 0.00 35.40 2.24
6 7 0.162294 GTGCCGTACGTGCAACTAAC 59.838 55.000 25.80 13.84 41.06 2.34
7 8 2.519826 GTGCCGTACGTGCAACTAA 58.480 52.632 25.80 7.15 41.06 2.24
8 9 4.248402 GTGCCGTACGTGCAACTA 57.752 55.556 25.80 7.46 41.06 2.24
24 25 4.132441 TATTCGAACCGGCGCCGT 62.132 61.111 43.12 29.47 37.81 5.68
25 26 3.623330 GTATTCGAACCGGCGCCG 61.623 66.667 41.00 41.00 39.44 6.46
26 27 3.267118 GGTATTCGAACCGGCGCC 61.267 66.667 19.07 19.07 0.00 6.53
27 28 2.509786 TGGTATTCGAACCGGCGC 60.510 61.111 0.00 0.00 42.91 6.53
28 29 3.700961 CTGGTATTCGAACCGGCG 58.299 61.111 0.00 0.00 42.91 6.46
30 31 1.881252 CCGCTGGTATTCGAACCGG 60.881 63.158 10.31 10.31 46.99 5.28
31 32 0.101040 TACCGCTGGTATTCGAACCG 59.899 55.000 0.00 0.00 42.91 4.44
32 33 1.849097 CTACCGCTGGTATTCGAACC 58.151 55.000 0.00 0.00 37.56 3.62
33 34 1.206523 GCTACCGCTGGTATTCGAAC 58.793 55.000 0.00 0.00 37.56 3.95
34 35 0.248743 CGCTACCGCTGGTATTCGAA 60.249 55.000 0.00 0.00 37.56 3.71
35 36 1.357690 CGCTACCGCTGGTATTCGA 59.642 57.895 16.53 0.00 37.56 3.71
36 37 3.917870 CGCTACCGCTGGTATTCG 58.082 61.111 7.71 10.04 37.56 3.34
46 47 0.717224 ATAAAACACACGCGCTACCG 59.283 50.000 5.73 0.00 37.57 4.02
47 48 2.886587 AATAAAACACACGCGCTACC 57.113 45.000 5.73 0.00 0.00 3.18
48 49 3.801293 TCAAATAAAACACACGCGCTAC 58.199 40.909 5.73 0.00 0.00 3.58
49 50 3.495377 ACTCAAATAAAACACACGCGCTA 59.505 39.130 5.73 0.00 0.00 4.26
50 51 2.289547 ACTCAAATAAAACACACGCGCT 59.710 40.909 5.73 0.00 0.00 5.92
51 52 2.646250 ACTCAAATAAAACACACGCGC 58.354 42.857 5.73 0.00 0.00 6.86
52 53 5.258685 TCTACTCAAATAAAACACACGCG 57.741 39.130 3.53 3.53 0.00 6.01
53 54 8.502161 AAAATCTACTCAAATAAAACACACGC 57.498 30.769 0.00 0.00 0.00 5.34
77 78 2.840651 TGAAAAAGGGTCCTGCCAAAAA 59.159 40.909 0.00 0.00 39.65 1.94
78 79 2.169561 GTGAAAAAGGGTCCTGCCAAAA 59.830 45.455 0.00 0.00 39.65 2.44
79 80 1.760029 GTGAAAAAGGGTCCTGCCAAA 59.240 47.619 0.00 0.00 39.65 3.28
80 81 1.342474 TGTGAAAAAGGGTCCTGCCAA 60.342 47.619 0.00 0.00 39.65 4.52
81 82 0.260230 TGTGAAAAAGGGTCCTGCCA 59.740 50.000 0.00 0.00 39.65 4.92
82 83 1.408969 TTGTGAAAAAGGGTCCTGCC 58.591 50.000 0.00 0.00 0.00 4.85
83 84 2.167487 TGTTTGTGAAAAAGGGTCCTGC 59.833 45.455 0.00 0.00 0.00 4.85
84 85 4.432712 CTTGTTTGTGAAAAAGGGTCCTG 58.567 43.478 0.00 0.00 0.00 3.86
85 86 3.450817 CCTTGTTTGTGAAAAAGGGTCCT 59.549 43.478 0.95 0.00 36.36 3.85
86 87 3.792401 CCTTGTTTGTGAAAAAGGGTCC 58.208 45.455 0.95 0.00 36.36 4.46
90 91 7.492344 GCATATATCCCTTGTTTGTGAAAAAGG 59.508 37.037 1.81 1.81 39.15 3.11
91 92 7.220683 CGCATATATCCCTTGTTTGTGAAAAAG 59.779 37.037 0.00 0.00 0.00 2.27
92 93 7.032580 CGCATATATCCCTTGTTTGTGAAAAA 58.967 34.615 0.00 0.00 0.00 1.94
93 94 6.559810 CGCATATATCCCTTGTTTGTGAAAA 58.440 36.000 0.00 0.00 0.00 2.29
94 95 5.449862 GCGCATATATCCCTTGTTTGTGAAA 60.450 40.000 0.30 0.00 0.00 2.69
95 96 4.036262 GCGCATATATCCCTTGTTTGTGAA 59.964 41.667 0.30 0.00 0.00 3.18
96 97 3.563808 GCGCATATATCCCTTGTTTGTGA 59.436 43.478 0.30 0.00 0.00 3.58
97 98 3.606846 CGCGCATATATCCCTTGTTTGTG 60.607 47.826 8.75 0.00 0.00 3.33
98 99 2.548057 CGCGCATATATCCCTTGTTTGT 59.452 45.455 8.75 0.00 0.00 2.83
99 100 2.805671 TCGCGCATATATCCCTTGTTTG 59.194 45.455 8.75 0.00 0.00 2.93
100 101 3.120321 TCGCGCATATATCCCTTGTTT 57.880 42.857 8.75 0.00 0.00 2.83
101 102 2.831685 TCGCGCATATATCCCTTGTT 57.168 45.000 8.75 0.00 0.00 2.83
102 103 3.334583 AATCGCGCATATATCCCTTGT 57.665 42.857 8.75 0.00 0.00 3.16
103 104 4.870426 ACTTAATCGCGCATATATCCCTTG 59.130 41.667 8.75 0.00 0.00 3.61
104 105 5.086104 ACTTAATCGCGCATATATCCCTT 57.914 39.130 8.75 0.00 0.00 3.95
105 106 4.737855 ACTTAATCGCGCATATATCCCT 57.262 40.909 8.75 0.00 0.00 4.20
106 107 6.897259 TTTACTTAATCGCGCATATATCCC 57.103 37.500 8.75 0.00 0.00 3.85
107 108 8.440833 AGTTTTTACTTAATCGCGCATATATCC 58.559 33.333 8.75 0.00 0.00 2.59
111 112 8.227791 CCATAGTTTTTACTTAATCGCGCATAT 58.772 33.333 8.75 0.00 0.00 1.78
112 113 7.307514 CCCATAGTTTTTACTTAATCGCGCATA 60.308 37.037 8.75 0.00 0.00 3.14
113 114 6.427150 CCATAGTTTTTACTTAATCGCGCAT 58.573 36.000 8.75 0.00 0.00 4.73
114 115 5.220700 CCCATAGTTTTTACTTAATCGCGCA 60.221 40.000 8.75 0.00 0.00 6.09
115 116 5.202640 CCCATAGTTTTTACTTAATCGCGC 58.797 41.667 0.00 0.00 0.00 6.86
116 117 6.183360 ACACCCATAGTTTTTACTTAATCGCG 60.183 38.462 0.00 0.00 0.00 5.87
117 118 7.080353 ACACCCATAGTTTTTACTTAATCGC 57.920 36.000 0.00 0.00 0.00 4.58
118 119 9.902196 AAAACACCCATAGTTTTTACTTAATCG 57.098 29.630 0.00 0.00 44.29 3.34
142 143 4.005650 TGTGGCATGTTCTTTTGCAAAAA 58.994 34.783 23.92 10.91 40.66 1.94
143 144 3.603532 TGTGGCATGTTCTTTTGCAAAA 58.396 36.364 22.61 22.61 40.66 2.44
144 145 3.257469 TGTGGCATGTTCTTTTGCAAA 57.743 38.095 8.05 8.05 40.66 3.68
145 146 2.975732 TGTGGCATGTTCTTTTGCAA 57.024 40.000 0.00 0.00 40.66 4.08
146 147 2.364647 TGATGTGGCATGTTCTTTTGCA 59.635 40.909 0.00 0.00 40.66 4.08
147 148 2.991190 CTGATGTGGCATGTTCTTTTGC 59.009 45.455 0.00 0.00 38.14 3.68
148 149 2.991190 GCTGATGTGGCATGTTCTTTTG 59.009 45.455 0.00 0.00 0.00 2.44
149 150 2.895404 AGCTGATGTGGCATGTTCTTTT 59.105 40.909 0.00 0.00 0.00 2.27
150 151 2.230508 CAGCTGATGTGGCATGTTCTTT 59.769 45.455 8.42 0.00 0.00 2.52
151 152 1.816835 CAGCTGATGTGGCATGTTCTT 59.183 47.619 8.42 0.00 0.00 2.52
152 153 1.460504 CAGCTGATGTGGCATGTTCT 58.539 50.000 8.42 0.00 0.00 3.01
153 154 0.179145 GCAGCTGATGTGGCATGTTC 60.179 55.000 20.43 0.00 0.00 3.18
154 155 0.611062 AGCAGCTGATGTGGCATGTT 60.611 50.000 20.43 0.00 0.00 2.71
155 156 1.001269 AGCAGCTGATGTGGCATGT 60.001 52.632 20.43 0.00 0.00 3.21
156 157 1.029947 TCAGCAGCTGATGTGGCATG 61.030 55.000 29.56 4.30 35.39 4.06
157 158 1.030488 GTCAGCAGCTGATGTGGCAT 61.030 55.000 29.56 0.00 42.73 4.40
158 159 1.673337 GTCAGCAGCTGATGTGGCA 60.673 57.895 29.56 9.46 42.73 4.92
159 160 1.645704 CTGTCAGCAGCTGATGTGGC 61.646 60.000 29.56 20.58 42.73 5.01
160 161 1.025113 CCTGTCAGCAGCTGATGTGG 61.025 60.000 29.56 24.08 42.73 4.17
161 162 1.645704 GCCTGTCAGCAGCTGATGTG 61.646 60.000 29.56 19.98 42.73 3.21
162 163 1.376942 GCCTGTCAGCAGCTGATGT 60.377 57.895 29.56 4.80 42.73 3.06
163 164 2.461945 CGCCTGTCAGCAGCTGATG 61.462 63.158 27.86 25.84 42.73 3.07
164 165 2.125229 CGCCTGTCAGCAGCTGAT 60.125 61.111 27.86 8.90 42.73 2.90
165 166 4.383861 CCGCCTGTCAGCAGCTGA 62.384 66.667 21.85 21.85 41.26 4.26
172 173 4.020617 TTGGAGCCCGCCTGTCAG 62.021 66.667 0.00 0.00 0.00 3.51
173 174 4.329545 GTTGGAGCCCGCCTGTCA 62.330 66.667 0.00 0.00 0.00 3.58
183 184 0.811616 CTGTATCTGGCCGTTGGAGC 60.812 60.000 0.00 0.00 0.00 4.70
184 185 0.811616 GCTGTATCTGGCCGTTGGAG 60.812 60.000 0.00 0.00 0.00 3.86
185 186 1.220749 GCTGTATCTGGCCGTTGGA 59.779 57.895 0.00 0.00 0.00 3.53
186 187 2.173669 CGCTGTATCTGGCCGTTGG 61.174 63.158 0.00 0.00 0.00 3.77
187 188 1.421410 GACGCTGTATCTGGCCGTTG 61.421 60.000 0.00 0.00 0.00 4.10
188 189 1.153628 GACGCTGTATCTGGCCGTT 60.154 57.895 0.00 0.00 0.00 4.44
189 190 1.884075 TTGACGCTGTATCTGGCCGT 61.884 55.000 0.00 0.00 0.00 5.68
190 191 0.530650 ATTGACGCTGTATCTGGCCG 60.531 55.000 0.00 0.00 0.00 6.13
191 192 2.135933 GTATTGACGCTGTATCTGGCC 58.864 52.381 0.00 0.00 0.00 5.36
192 193 2.540101 GTGTATTGACGCTGTATCTGGC 59.460 50.000 0.00 0.00 33.03 4.85
193 194 4.046938 AGTGTATTGACGCTGTATCTGG 57.953 45.455 0.00 0.00 44.84 3.86
202 203 4.098532 GCGTATAACAGTGTATTGACGC 57.901 45.455 21.33 21.33 46.12 5.19
203 204 4.796830 ACTGCGTATAACAGTGTATTGACG 59.203 41.667 8.49 12.83 46.38 4.35
213 214 6.715344 TTTGGTCTAAACTGCGTATAACAG 57.285 37.500 3.10 3.10 41.08 3.16
214 215 7.173562 ACAATTTGGTCTAAACTGCGTATAACA 59.826 33.333 0.78 0.00 28.87 2.41
215 216 7.524065 ACAATTTGGTCTAAACTGCGTATAAC 58.476 34.615 0.78 0.00 28.87 1.89
216 217 7.675962 ACAATTTGGTCTAAACTGCGTATAA 57.324 32.000 0.78 0.00 28.87 0.98
217 218 8.658609 GTTACAATTTGGTCTAAACTGCGTATA 58.341 33.333 0.78 0.00 28.87 1.47
218 219 7.173562 TGTTACAATTTGGTCTAAACTGCGTAT 59.826 33.333 0.78 0.00 28.87 3.06
219 220 6.482641 TGTTACAATTTGGTCTAAACTGCGTA 59.517 34.615 0.78 0.00 28.87 4.42
220 221 5.297278 TGTTACAATTTGGTCTAAACTGCGT 59.703 36.000 0.78 0.00 28.87 5.24
221 222 5.753744 TGTTACAATTTGGTCTAAACTGCG 58.246 37.500 0.78 0.00 28.87 5.18
222 223 6.856426 GTCTGTTACAATTTGGTCTAAACTGC 59.144 38.462 0.78 0.00 28.87 4.40
223 224 8.070171 CAGTCTGTTACAATTTGGTCTAAACTG 58.930 37.037 0.78 4.54 32.06 3.16
224 225 7.773690 ACAGTCTGTTACAATTTGGTCTAAACT 59.226 33.333 0.00 0.00 0.00 2.66
225 226 7.927048 ACAGTCTGTTACAATTTGGTCTAAAC 58.073 34.615 0.00 0.00 0.00 2.01
226 227 7.227910 GGACAGTCTGTTACAATTTGGTCTAAA 59.772 37.037 7.00 0.00 0.00 1.85
227 228 6.708949 GGACAGTCTGTTACAATTTGGTCTAA 59.291 38.462 7.00 0.00 0.00 2.10
228 229 6.228258 GGACAGTCTGTTACAATTTGGTCTA 58.772 40.000 7.00 0.00 0.00 2.59
229 230 5.063880 GGACAGTCTGTTACAATTTGGTCT 58.936 41.667 7.00 0.00 0.00 3.85
230 231 4.215613 GGGACAGTCTGTTACAATTTGGTC 59.784 45.833 7.00 0.00 0.00 4.02
231 232 4.142038 GGGACAGTCTGTTACAATTTGGT 58.858 43.478 7.00 0.00 0.00 3.67
232 233 4.141287 TGGGACAGTCTGTTACAATTTGG 58.859 43.478 7.00 0.00 0.00 3.28
253 254 1.336795 TGCACGTCAGTACCATGTCTG 60.337 52.381 0.00 0.00 0.00 3.51
254 255 0.966179 TGCACGTCAGTACCATGTCT 59.034 50.000 0.00 0.00 0.00 3.41
255 256 1.790755 TTGCACGTCAGTACCATGTC 58.209 50.000 0.00 0.00 0.00 3.06
256 257 2.248280 TTTGCACGTCAGTACCATGT 57.752 45.000 0.00 0.00 0.00 3.21
257 258 3.617540 TTTTTGCACGTCAGTACCATG 57.382 42.857 0.00 0.00 0.00 3.66
275 276 6.594159 CGGATCAGTACCACTATTCAGTTTTT 59.406 38.462 0.00 0.00 30.46 1.94
276 277 6.106673 CGGATCAGTACCACTATTCAGTTTT 58.893 40.000 0.00 0.00 30.46 2.43
277 278 5.187186 ACGGATCAGTACCACTATTCAGTTT 59.813 40.000 0.00 0.00 30.46 2.66
278 279 4.710375 ACGGATCAGTACCACTATTCAGTT 59.290 41.667 0.00 0.00 30.46 3.16
279 280 4.279145 ACGGATCAGTACCACTATTCAGT 58.721 43.478 0.00 0.00 34.42 3.41
280 281 4.338400 TGACGGATCAGTACCACTATTCAG 59.662 45.833 0.00 0.00 0.00 3.02
281 282 4.097437 GTGACGGATCAGTACCACTATTCA 59.903 45.833 9.57 0.00 34.75 2.57
282 283 4.097437 TGTGACGGATCAGTACCACTATTC 59.903 45.833 15.38 0.00 34.75 1.75
283 284 4.021229 TGTGACGGATCAGTACCACTATT 58.979 43.478 15.38 0.00 34.75 1.73
284 285 3.380637 GTGTGACGGATCAGTACCACTAT 59.619 47.826 15.38 0.00 34.75 2.12
285 286 2.751259 GTGTGACGGATCAGTACCACTA 59.249 50.000 15.38 3.88 34.75 2.74
286 287 1.544691 GTGTGACGGATCAGTACCACT 59.455 52.381 15.38 0.00 34.75 4.00
287 288 1.403780 GGTGTGACGGATCAGTACCAC 60.404 57.143 14.91 14.91 40.58 4.16
288 289 0.892755 GGTGTGACGGATCAGTACCA 59.107 55.000 10.48 3.01 40.58 3.25
289 290 1.135083 CAGGTGTGACGGATCAGTACC 60.135 57.143 8.01 8.01 40.93 3.34
290 291 1.736032 GCAGGTGTGACGGATCAGTAC 60.736 57.143 0.00 0.00 34.75 2.73
291 292 0.530744 GCAGGTGTGACGGATCAGTA 59.469 55.000 0.00 0.00 34.75 2.74
292 293 1.293498 GCAGGTGTGACGGATCAGT 59.707 57.895 0.00 0.00 34.75 3.41
293 294 1.448540 GGCAGGTGTGACGGATCAG 60.449 63.158 0.00 0.00 34.75 2.90
294 295 1.888436 GAGGCAGGTGTGACGGATCA 61.888 60.000 0.00 0.00 36.45 2.92
295 296 1.153549 GAGGCAGGTGTGACGGATC 60.154 63.158 0.00 0.00 36.45 3.36
296 297 1.480212 TTGAGGCAGGTGTGACGGAT 61.480 55.000 0.00 0.00 36.45 4.18
297 298 1.691195 TTTGAGGCAGGTGTGACGGA 61.691 55.000 0.00 0.00 36.45 4.69
298 299 0.606401 ATTTGAGGCAGGTGTGACGG 60.606 55.000 0.00 0.00 36.45 4.79
299 300 0.518636 CATTTGAGGCAGGTGTGACG 59.481 55.000 0.00 0.00 36.45 4.35
300 301 1.609208 ACATTTGAGGCAGGTGTGAC 58.391 50.000 0.00 0.00 0.00 3.67
301 302 2.371841 ACTACATTTGAGGCAGGTGTGA 59.628 45.455 0.00 0.00 0.00 3.58
302 303 2.783135 ACTACATTTGAGGCAGGTGTG 58.217 47.619 0.00 0.00 0.00 3.82
303 304 3.583086 AGTACTACATTTGAGGCAGGTGT 59.417 43.478 0.00 0.00 0.00 4.16
304 305 4.207891 AGTACTACATTTGAGGCAGGTG 57.792 45.455 0.00 0.00 0.00 4.00
305 306 4.323562 GGAAGTACTACATTTGAGGCAGGT 60.324 45.833 0.00 0.00 0.00 4.00
306 307 4.192317 GGAAGTACTACATTTGAGGCAGG 58.808 47.826 0.00 0.00 0.00 4.85
307 308 3.865745 CGGAAGTACTACATTTGAGGCAG 59.134 47.826 0.00 0.00 0.00 4.85
308 309 3.259876 ACGGAAGTACTACATTTGAGGCA 59.740 43.478 0.00 0.00 46.88 4.75
309 310 3.858247 ACGGAAGTACTACATTTGAGGC 58.142 45.455 0.00 0.00 46.88 4.70
344 345 8.401955 AATATCTTCAGGGAGTAGGGTAAAAA 57.598 34.615 0.00 0.00 0.00 1.94
345 346 8.272173 CAAATATCTTCAGGGAGTAGGGTAAAA 58.728 37.037 0.00 0.00 0.00 1.52
346 347 7.626084 TCAAATATCTTCAGGGAGTAGGGTAAA 59.374 37.037 0.00 0.00 0.00 2.01
347 348 7.136885 TCAAATATCTTCAGGGAGTAGGGTAA 58.863 38.462 0.00 0.00 0.00 2.85
348 349 6.689561 TCAAATATCTTCAGGGAGTAGGGTA 58.310 40.000 0.00 0.00 0.00 3.69
349 350 5.538877 TCAAATATCTTCAGGGAGTAGGGT 58.461 41.667 0.00 0.00 0.00 4.34
350 351 5.604650 ACTCAAATATCTTCAGGGAGTAGGG 59.395 44.000 0.00 0.00 32.80 3.53
351 352 6.739331 ACTCAAATATCTTCAGGGAGTAGG 57.261 41.667 0.00 0.00 32.80 3.18
634 635 1.408969 TTGTGAAAAAGGGTCCTGCC 58.591 50.000 0.00 0.00 0.00 4.85
635 636 2.167487 TGTTTGTGAAAAAGGGTCCTGC 59.833 45.455 0.00 0.00 0.00 4.85
636 637 4.432712 CTTGTTTGTGAAAAAGGGTCCTG 58.567 43.478 0.00 0.00 0.00 3.86
637 638 3.450817 CCTTGTTTGTGAAAAAGGGTCCT 59.549 43.478 0.95 0.00 36.36 3.85
638 639 3.792401 CCTTGTTTGTGAAAAAGGGTCC 58.208 45.455 0.95 0.00 36.36 4.46
642 643 7.492344 GCATATATCCCTTGTTTGTGAAAAAGG 59.508 37.037 1.81 1.81 39.15 3.11
643 644 7.220683 CGCATATATCCCTTGTTTGTGAAAAAG 59.779 37.037 0.00 0.00 0.00 2.27
644 645 7.032580 CGCATATATCCCTTGTTTGTGAAAAA 58.967 34.615 0.00 0.00 0.00 1.94
645 646 6.559810 CGCATATATCCCTTGTTTGTGAAAA 58.440 36.000 0.00 0.00 0.00 2.29
646 647 5.449862 GCGCATATATCCCTTGTTTGTGAAA 60.450 40.000 0.30 0.00 0.00 2.69
647 648 4.036262 GCGCATATATCCCTTGTTTGTGAA 59.964 41.667 0.30 0.00 0.00 3.18
648 649 3.563808 GCGCATATATCCCTTGTTTGTGA 59.436 43.478 0.30 0.00 0.00 3.58
649 650 3.606846 CGCGCATATATCCCTTGTTTGTG 60.607 47.826 8.75 0.00 0.00 3.33
650 651 2.548057 CGCGCATATATCCCTTGTTTGT 59.452 45.455 8.75 0.00 0.00 2.83
651 652 2.805671 TCGCGCATATATCCCTTGTTTG 59.194 45.455 8.75 0.00 0.00 2.93
652 653 3.120321 TCGCGCATATATCCCTTGTTT 57.880 42.857 8.75 0.00 0.00 2.83
653 654 2.831685 TCGCGCATATATCCCTTGTT 57.168 45.000 8.75 0.00 0.00 2.83
654 655 3.334583 AATCGCGCATATATCCCTTGT 57.665 42.857 8.75 0.00 0.00 3.16
655 656 4.870426 ACTTAATCGCGCATATATCCCTTG 59.130 41.667 8.75 0.00 0.00 3.61
656 657 5.086104 ACTTAATCGCGCATATATCCCTT 57.914 39.130 8.75 0.00 0.00 3.95
657 658 4.737855 ACTTAATCGCGCATATATCCCT 57.262 40.909 8.75 0.00 0.00 4.20
658 659 6.897259 TTTACTTAATCGCGCATATATCCC 57.103 37.500 8.75 0.00 0.00 3.85
659 660 8.440833 AGTTTTTACTTAATCGCGCATATATCC 58.559 33.333 8.75 0.00 0.00 2.59
663 664 8.227791 CCATAGTTTTTACTTAATCGCGCATAT 58.772 33.333 8.75 0.00 0.00 1.78
664 665 7.307514 CCCATAGTTTTTACTTAATCGCGCATA 60.308 37.037 8.75 0.00 0.00 3.14
665 666 6.427150 CCATAGTTTTTACTTAATCGCGCAT 58.573 36.000 8.75 0.00 0.00 4.73
666 667 5.220700 CCCATAGTTTTTACTTAATCGCGCA 60.221 40.000 8.75 0.00 0.00 6.09
667 668 5.202640 CCCATAGTTTTTACTTAATCGCGC 58.797 41.667 0.00 0.00 0.00 6.86
668 669 6.183360 ACACCCATAGTTTTTACTTAATCGCG 60.183 38.462 0.00 0.00 0.00 5.87
669 670 7.080353 ACACCCATAGTTTTTACTTAATCGC 57.920 36.000 0.00 0.00 0.00 4.58
670 671 9.902196 AAAACACCCATAGTTTTTACTTAATCG 57.098 29.630 0.00 0.00 44.29 3.34
694 695 4.005650 TGTGGCATGTTCTTTTGCAAAAA 58.994 34.783 23.92 10.91 40.66 1.94
695 696 3.603532 TGTGGCATGTTCTTTTGCAAAA 58.396 36.364 22.61 22.61 40.66 2.44
696 697 3.257469 TGTGGCATGTTCTTTTGCAAA 57.743 38.095 8.05 8.05 40.66 3.68
697 698 2.975732 TGTGGCATGTTCTTTTGCAA 57.024 40.000 0.00 0.00 40.66 4.08
698 699 2.364647 TGATGTGGCATGTTCTTTTGCA 59.635 40.909 0.00 0.00 40.66 4.08
699 700 2.991190 CTGATGTGGCATGTTCTTTTGC 59.009 45.455 0.00 0.00 38.14 3.68
700 701 2.991190 GCTGATGTGGCATGTTCTTTTG 59.009 45.455 0.00 0.00 0.00 2.44
701 702 2.895404 AGCTGATGTGGCATGTTCTTTT 59.105 40.909 0.00 0.00 0.00 2.27
702 703 2.230508 CAGCTGATGTGGCATGTTCTTT 59.769 45.455 8.42 0.00 0.00 2.52
703 704 1.816835 CAGCTGATGTGGCATGTTCTT 59.183 47.619 8.42 0.00 0.00 2.52
704 705 1.460504 CAGCTGATGTGGCATGTTCT 58.539 50.000 8.42 0.00 0.00 3.01
705 706 0.179145 GCAGCTGATGTGGCATGTTC 60.179 55.000 20.43 0.00 0.00 3.18
706 707 0.611062 AGCAGCTGATGTGGCATGTT 60.611 50.000 20.43 0.00 0.00 2.71
707 708 1.001269 AGCAGCTGATGTGGCATGT 60.001 52.632 20.43 0.00 0.00 3.21
708 709 1.029947 TCAGCAGCTGATGTGGCATG 61.030 55.000 29.56 4.30 35.39 4.06
709 710 1.030488 GTCAGCAGCTGATGTGGCAT 61.030 55.000 29.56 0.00 42.73 4.40
710 711 1.673337 GTCAGCAGCTGATGTGGCA 60.673 57.895 29.56 9.46 42.73 4.92
711 712 1.645704 CTGTCAGCAGCTGATGTGGC 61.646 60.000 29.56 20.58 42.73 5.01
712 713 1.025113 CCTGTCAGCAGCTGATGTGG 61.025 60.000 29.56 24.08 42.73 4.17
713 714 1.645704 GCCTGTCAGCAGCTGATGTG 61.646 60.000 29.56 19.98 42.73 3.21
714 715 1.376942 GCCTGTCAGCAGCTGATGT 60.377 57.895 29.56 4.80 42.73 3.06
715 716 2.461945 CGCCTGTCAGCAGCTGATG 61.462 63.158 27.86 25.84 42.73 3.07
716 717 2.125229 CGCCTGTCAGCAGCTGAT 60.125 61.111 27.86 8.90 42.73 2.90
717 718 4.383861 CCGCCTGTCAGCAGCTGA 62.384 66.667 21.85 21.85 41.26 4.26
724 725 4.020617 TTGGAGCCCGCCTGTCAG 62.021 66.667 0.00 0.00 0.00 3.51
725 726 4.329545 GTTGGAGCCCGCCTGTCA 62.330 66.667 0.00 0.00 0.00 3.58
735 736 0.811616 CTGTATCTGGCCGTTGGAGC 60.812 60.000 0.00 0.00 0.00 4.70
736 737 0.811616 GCTGTATCTGGCCGTTGGAG 60.812 60.000 0.00 0.00 0.00 3.86
737 738 1.220749 GCTGTATCTGGCCGTTGGA 59.779 57.895 0.00 0.00 0.00 3.53
738 739 2.173669 CGCTGTATCTGGCCGTTGG 61.174 63.158 0.00 0.00 0.00 3.77
739 740 1.421410 GACGCTGTATCTGGCCGTTG 61.421 60.000 0.00 0.00 0.00 4.10
740 741 1.153628 GACGCTGTATCTGGCCGTT 60.154 57.895 0.00 0.00 0.00 4.44
741 742 1.884075 TTGACGCTGTATCTGGCCGT 61.884 55.000 0.00 0.00 0.00 5.68
742 743 0.530650 ATTGACGCTGTATCTGGCCG 60.531 55.000 0.00 0.00 0.00 6.13
743 744 2.135933 GTATTGACGCTGTATCTGGCC 58.864 52.381 0.00 0.00 0.00 5.36
744 745 2.540101 GTGTATTGACGCTGTATCTGGC 59.460 50.000 0.00 0.00 33.03 4.85
745 746 4.046938 AGTGTATTGACGCTGTATCTGG 57.953 45.455 0.00 0.00 44.84 3.86
754 755 4.098532 GCGTATAACAGTGTATTGACGC 57.901 45.455 21.33 21.33 46.12 5.19
755 756 4.796830 ACTGCGTATAACAGTGTATTGACG 59.203 41.667 8.49 12.83 46.38 4.35
765 766 6.715344 TTTGGTCTAAACTGCGTATAACAG 57.285 37.500 3.10 3.10 41.08 3.16
766 767 7.173562 ACAATTTGGTCTAAACTGCGTATAACA 59.826 33.333 0.78 0.00 28.87 2.41
767 768 7.524065 ACAATTTGGTCTAAACTGCGTATAAC 58.476 34.615 0.78 0.00 28.87 1.89
768 769 7.675962 ACAATTTGGTCTAAACTGCGTATAA 57.324 32.000 0.78 0.00 28.87 0.98
769 770 8.658609 GTTACAATTTGGTCTAAACTGCGTATA 58.341 33.333 0.78 0.00 28.87 1.47
770 771 7.173562 TGTTACAATTTGGTCTAAACTGCGTAT 59.826 33.333 0.78 0.00 28.87 3.06
771 772 6.482641 TGTTACAATTTGGTCTAAACTGCGTA 59.517 34.615 0.78 0.00 28.87 4.42
772 773 5.297278 TGTTACAATTTGGTCTAAACTGCGT 59.703 36.000 0.78 0.00 28.87 5.24
773 774 5.753744 TGTTACAATTTGGTCTAAACTGCG 58.246 37.500 0.78 0.00 28.87 5.18
774 775 6.856426 GTCTGTTACAATTTGGTCTAAACTGC 59.144 38.462 0.78 0.00 28.87 4.40
775 776 8.070171 CAGTCTGTTACAATTTGGTCTAAACTG 58.930 37.037 0.78 4.54 32.06 3.16
776 777 7.773690 ACAGTCTGTTACAATTTGGTCTAAACT 59.226 33.333 0.00 0.00 0.00 2.66
777 778 7.927048 ACAGTCTGTTACAATTTGGTCTAAAC 58.073 34.615 0.00 0.00 0.00 2.01
778 779 7.990886 AGACAGTCTGTTACAATTTGGTCTAAA 59.009 33.333 7.00 0.00 30.78 1.85
779 780 7.506114 AGACAGTCTGTTACAATTTGGTCTAA 58.494 34.615 7.00 0.00 30.78 2.10
780 781 7.062749 AGACAGTCTGTTACAATTTGGTCTA 57.937 36.000 7.00 0.00 30.78 2.59
781 782 5.930135 AGACAGTCTGTTACAATTTGGTCT 58.070 37.500 7.00 0.00 0.00 3.85
782 783 5.758296 TGAGACAGTCTGTTACAATTTGGTC 59.242 40.000 8.15 0.00 0.00 4.02
783 784 5.680619 TGAGACAGTCTGTTACAATTTGGT 58.319 37.500 8.15 0.00 0.00 3.67
784 785 5.991606 TCTGAGACAGTCTGTTACAATTTGG 59.008 40.000 8.15 0.00 32.61 3.28
785 786 6.479990 TGTCTGAGACAGTCTGTTACAATTTG 59.520 38.462 11.93 0.00 37.67 2.32
786 787 6.582636 TGTCTGAGACAGTCTGTTACAATTT 58.417 36.000 11.93 0.00 37.67 1.82
787 788 6.161855 TGTCTGAGACAGTCTGTTACAATT 57.838 37.500 11.93 0.00 37.67 2.32
788 789 5.791336 TGTCTGAGACAGTCTGTTACAAT 57.209 39.130 11.93 0.00 37.67 2.71
789 790 5.509670 CCATGTCTGAGACAGTCTGTTACAA 60.510 44.000 20.90 0.00 46.04 2.41
790 791 4.021981 CCATGTCTGAGACAGTCTGTTACA 60.022 45.833 20.90 9.15 46.04 2.41
791 792 4.021894 ACCATGTCTGAGACAGTCTGTTAC 60.022 45.833 20.90 3.43 46.04 2.50
792 793 4.152647 ACCATGTCTGAGACAGTCTGTTA 58.847 43.478 20.90 0.00 46.04 2.41
793 794 2.968574 ACCATGTCTGAGACAGTCTGTT 59.031 45.455 20.90 0.04 46.04 3.16
794 795 2.603021 ACCATGTCTGAGACAGTCTGT 58.397 47.619 20.90 4.81 46.04 3.41
795 796 3.761218 AGTACCATGTCTGAGACAGTCTG 59.239 47.826 20.90 13.73 46.04 3.51
796 797 3.761218 CAGTACCATGTCTGAGACAGTCT 59.239 47.826 20.90 1.46 46.04 3.24
797 798 3.759086 TCAGTACCATGTCTGAGACAGTC 59.241 47.826 20.90 8.82 46.04 3.51
798 799 3.508012 GTCAGTACCATGTCTGAGACAGT 59.492 47.826 20.90 15.75 46.04 3.55
799 800 3.426829 CGTCAGTACCATGTCTGAGACAG 60.427 52.174 20.90 10.61 46.04 3.51
800 801 2.488153 CGTCAGTACCATGTCTGAGACA 59.512 50.000 18.64 18.64 46.90 3.41
801 802 2.488545 ACGTCAGTACCATGTCTGAGAC 59.511 50.000 5.47 5.47 40.63 3.36
802 803 2.488153 CACGTCAGTACCATGTCTGAGA 59.512 50.000 11.10 0.00 40.63 3.27
803 804 2.868662 CACGTCAGTACCATGTCTGAG 58.131 52.381 11.10 8.86 40.63 3.35
804 805 1.067846 GCACGTCAGTACCATGTCTGA 60.068 52.381 7.93 7.93 38.20 3.27
805 806 1.336795 TGCACGTCAGTACCATGTCTG 60.337 52.381 0.00 0.00 0.00 3.51
806 807 0.966179 TGCACGTCAGTACCATGTCT 59.034 50.000 0.00 0.00 0.00 3.41
807 808 1.790755 TTGCACGTCAGTACCATGTC 58.209 50.000 0.00 0.00 0.00 3.06
808 809 2.248280 TTTGCACGTCAGTACCATGT 57.752 45.000 0.00 0.00 0.00 3.21
809 810 3.617540 TTTTTGCACGTCAGTACCATG 57.382 42.857 0.00 0.00 0.00 3.66
827 828 6.594159 CGGATCAGTACCACTATTCAGTTTTT 59.406 38.462 0.00 0.00 30.46 1.94
828 829 6.106673 CGGATCAGTACCACTATTCAGTTTT 58.893 40.000 0.00 0.00 30.46 2.43
829 830 5.187186 ACGGATCAGTACCACTATTCAGTTT 59.813 40.000 0.00 0.00 30.46 2.66
830 831 4.710375 ACGGATCAGTACCACTATTCAGTT 59.290 41.667 0.00 0.00 30.46 3.16
831 832 4.279145 ACGGATCAGTACCACTATTCAGT 58.721 43.478 0.00 0.00 34.42 3.41
832 833 4.338400 TGACGGATCAGTACCACTATTCAG 59.662 45.833 0.00 0.00 0.00 3.02
833 834 4.097437 GTGACGGATCAGTACCACTATTCA 59.903 45.833 9.57 0.00 34.75 2.57
834 835 4.097437 TGTGACGGATCAGTACCACTATTC 59.903 45.833 15.38 0.00 34.75 1.75
835 836 4.021229 TGTGACGGATCAGTACCACTATT 58.979 43.478 15.38 0.00 34.75 1.73
836 837 3.380637 GTGTGACGGATCAGTACCACTAT 59.619 47.826 15.38 0.00 34.75 2.12
837 838 2.751259 GTGTGACGGATCAGTACCACTA 59.249 50.000 15.38 3.88 34.75 2.74
838 839 1.544691 GTGTGACGGATCAGTACCACT 59.455 52.381 15.38 0.00 34.75 4.00
839 840 1.403780 GGTGTGACGGATCAGTACCAC 60.404 57.143 14.91 14.91 40.58 4.16
840 841 0.892755 GGTGTGACGGATCAGTACCA 59.107 55.000 10.48 3.01 40.58 3.25
841 842 1.135083 CAGGTGTGACGGATCAGTACC 60.135 57.143 8.01 8.01 40.93 3.34
842 843 1.736032 GCAGGTGTGACGGATCAGTAC 60.736 57.143 0.00 0.00 34.75 2.73
843 844 0.530744 GCAGGTGTGACGGATCAGTA 59.469 55.000 0.00 0.00 34.75 2.74
844 845 1.293498 GCAGGTGTGACGGATCAGT 59.707 57.895 0.00 0.00 34.75 3.41
845 846 1.448540 GGCAGGTGTGACGGATCAG 60.449 63.158 0.00 0.00 34.75 2.90
846 847 1.888436 GAGGCAGGTGTGACGGATCA 61.888 60.000 0.00 0.00 36.45 2.92
847 848 1.153549 GAGGCAGGTGTGACGGATC 60.154 63.158 0.00 0.00 36.45 3.36
848 849 1.480212 TTGAGGCAGGTGTGACGGAT 61.480 55.000 0.00 0.00 36.45 4.18
849 850 1.691195 TTTGAGGCAGGTGTGACGGA 61.691 55.000 0.00 0.00 36.45 4.69
850 851 0.606401 ATTTGAGGCAGGTGTGACGG 60.606 55.000 0.00 0.00 36.45 4.79
851 852 0.518636 CATTTGAGGCAGGTGTGACG 59.481 55.000 0.00 0.00 36.45 4.35
852 853 1.609208 ACATTTGAGGCAGGTGTGAC 58.391 50.000 0.00 0.00 0.00 3.67
853 854 2.371841 ACTACATTTGAGGCAGGTGTGA 59.628 45.455 0.00 0.00 0.00 3.58
854 855 2.783135 ACTACATTTGAGGCAGGTGTG 58.217 47.619 0.00 0.00 0.00 3.82
855 856 3.583086 AGTACTACATTTGAGGCAGGTGT 59.417 43.478 0.00 0.00 0.00 4.16
856 857 4.207891 AGTACTACATTTGAGGCAGGTG 57.792 45.455 0.00 0.00 0.00 4.00
857 858 4.323562 GGAAGTACTACATTTGAGGCAGGT 60.324 45.833 0.00 0.00 0.00 4.00
858 859 4.192317 GGAAGTACTACATTTGAGGCAGG 58.808 47.826 0.00 0.00 0.00 4.85
859 860 3.865745 CGGAAGTACTACATTTGAGGCAG 59.134 47.826 0.00 0.00 0.00 4.85
860 861 3.259876 ACGGAAGTACTACATTTGAGGCA 59.740 43.478 0.00 0.00 46.88 4.75
861 862 3.858247 ACGGAAGTACTACATTTGAGGC 58.142 45.455 0.00 0.00 46.88 4.70
1118 1122 2.485582 CGACAGAGACGATGCGGT 59.514 61.111 0.00 0.00 0.00 5.68
1125 1129 1.916651 CTTTCATGAGCGACAGAGACG 59.083 52.381 0.00 0.00 0.00 4.18
1165 1169 4.361783 TCCCTGGTATCTGATGAGAACAA 58.638 43.478 0.00 0.00 30.08 2.83
1185 1189 1.971695 CGGGAAAACCTGCCACTCC 60.972 63.158 0.00 0.00 34.42 3.85
1304 1308 1.713937 TTGCAGTGTGGCAGTGTTCG 61.714 55.000 5.93 0.00 45.88 3.95
1350 1354 0.031817 ATTCCCCTTGCCCTTCCATG 60.032 55.000 0.00 0.00 0.00 3.66
1399 1403 1.160329 ACTGCGCAGACCAAACAGAC 61.160 55.000 42.03 0.00 32.67 3.51
1488 1492 1.203052 CCATCCTGCAGCGAAATTGTT 59.797 47.619 8.66 0.00 0.00 2.83
1510 1520 0.478072 AGAGCAACATCACCACCCAA 59.522 50.000 0.00 0.00 0.00 4.12
1644 1654 0.394565 AAGAGTGAGTGACAGGGCAC 59.605 55.000 0.00 0.00 39.05 5.01
1830 1846 5.659440 ATGATTGGGTTACACAAATGACC 57.341 39.130 3.48 0.00 0.00 4.02
1855 1871 6.204301 AGCAATATCATGTCAGCTACAATGAC 59.796 38.462 6.55 1.92 45.88 3.06
1879 1903 8.224437 GCTTCAGCTACTTTCTAGTTACAAAAG 58.776 37.037 0.00 0.00 38.21 2.27
2048 2077 3.840666 TCTACAAAGGACAGAGAGCCAAT 59.159 43.478 0.00 0.00 0.00 3.16
2051 2080 3.963428 TTCTACAAAGGACAGAGAGCC 57.037 47.619 0.00 0.00 0.00 4.70
2666 2705 0.812549 GACGAGAGGAGGAGGTTGAC 59.187 60.000 0.00 0.00 0.00 3.18
2714 2756 2.653115 CTCGAGTGGTGCTGCTCA 59.347 61.111 3.62 0.00 0.00 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.