Multiple sequence alignment - TraesCS1A01G202900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G202900 chr1A 100.000 2246 0 0 1 2246 364047856 364045611 0.000000e+00 4148.0
1 TraesCS1A01G202900 chr1A 91.083 157 12 1 489 643 276260164 276260320 6.280000e-51 211.0
2 TraesCS1A01G202900 chr1A 83.550 231 28 5 270 495 577781593 577781818 8.130000e-50 207.0
3 TraesCS1A01G202900 chr1A 89.937 159 14 1 487 643 500834539 500834381 1.050000e-48 204.0
4 TraesCS1A01G202900 chr1A 88.000 150 13 2 346 495 577776576 577776720 2.970000e-39 172.0
5 TraesCS1A01G202900 chr1D 93.147 1255 54 7 705 1929 291807594 291806342 0.000000e+00 1812.0
6 TraesCS1A01G202900 chr1D 84.066 182 16 7 494 671 465092571 465092399 1.780000e-36 163.0
7 TraesCS1A01G202900 chr1D 100.000 38 0 0 677 714 291807820 291807783 1.110000e-08 71.3
8 TraesCS1A01G202900 chr1B 93.725 988 39 11 677 1653 392758823 392757848 0.000000e+00 1459.0
9 TraesCS1A01G202900 chr1B 83.631 336 24 11 1710 2031 392757832 392757514 1.020000e-73 287.0
10 TraesCS1A01G202900 chr5A 77.574 544 65 41 1 495 688367811 688368346 2.200000e-70 276.0
11 TraesCS1A01G202900 chr6A 91.429 175 11 2 492 664 456759182 456759010 1.040000e-58 237.0
12 TraesCS1A01G202900 chr6A 92.903 155 9 1 491 643 158071827 158071981 8.070000e-55 224.0
13 TraesCS1A01G202900 chr6A 89.333 150 11 2 346 495 129336142 129335998 1.370000e-42 183.0
14 TraesCS1A01G202900 chr4A 93.464 153 8 1 493 643 527114400 527114248 2.240000e-55 226.0
15 TraesCS1A01G202900 chr4B 83.913 230 28 4 270 495 522078545 522078321 6.280000e-51 211.0
16 TraesCS1A01G202900 chr4B 79.775 178 21 11 497 671 93739377 93739212 5.070000e-22 115.0
17 TraesCS1A01G202900 chr2A 83.913 230 28 4 270 495 513661610 513661834 6.280000e-51 211.0
18 TraesCS1A01G202900 chr2A 88.158 152 13 2 344 495 513656591 513656737 2.290000e-40 176.0
19 TraesCS1A01G202900 chr3A 91.026 156 12 1 490 643 141960392 141960237 2.260000e-50 209.0
20 TraesCS1A01G202900 chr3A 90.446 157 13 1 489 643 640759971 640760127 2.920000e-49 206.0
21 TraesCS1A01G202900 chr6B 91.946 149 10 1 497 643 392486059 392485911 8.130000e-50 207.0
22 TraesCS1A01G202900 chr2B 90.123 162 12 3 485 643 200902077 200902237 8.130000e-50 207.0
23 TraesCS1A01G202900 chr2B 74.595 185 30 13 494 673 799591120 799591292 5.180000e-07 65.8
24 TraesCS1A01G202900 chr7D 82.609 230 33 4 270 495 595397257 595397483 1.760000e-46 196.0
25 TraesCS1A01G202900 chrUn 81.102 254 34 9 250 495 16601816 16601569 8.190000e-45 191.0
26 TraesCS1A01G202900 chr7B 80.889 225 30 5 271 495 640906703 640906492 4.960000e-37 165.0
27 TraesCS1A01G202900 chr4D 83.648 159 15 5 512 669 295472743 295472595 3.010000e-29 139.0
28 TraesCS1A01G202900 chr4D 100.000 28 0 0 643 670 77127811 77127784 4.000000e-03 52.8
29 TraesCS1A01G202900 chr6D 79.888 179 23 9 494 670 90112238 90112405 3.920000e-23 119.0
30 TraesCS1A01G202900 chr3D 75.691 181 29 11 494 671 181652452 181652620 2.390000e-10 76.8
31 TraesCS1A01G202900 chr5D 100.000 29 0 0 643 671 12062428 12062456 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G202900 chr1A 364045611 364047856 2245 True 4148.00 4148 100.0000 1 2246 1 chr1A.!!$R1 2245
1 TraesCS1A01G202900 chr1D 291806342 291807820 1478 True 941.65 1812 96.5735 677 1929 2 chr1D.!!$R2 1252
2 TraesCS1A01G202900 chr1B 392757514 392758823 1309 True 873.00 1459 88.6780 677 2031 2 chr1B.!!$R1 1354
3 TraesCS1A01G202900 chr5A 688367811 688368346 535 False 276.00 276 77.5740 1 495 1 chr5A.!!$F1 494

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
473 559 0.034337 GGAAGACGGCTTGTGGTACA 59.966 55.0 9.15 0.0 33.61 2.9 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2035 2371 0.039911 ACTCTAGGGCTCCGTCAAGT 59.96 55.0 0.0 0.0 0.0 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.987125 GAGGCGAAGGGGTTGCTA 59.013 61.111 0.00 0.00 36.77 3.49
18 19 1.298667 GAGGCGAAGGGGTTGCTAA 59.701 57.895 0.00 0.00 36.77 3.09
21 22 1.002502 GCGAAGGGGTTGCTAAGGT 60.003 57.895 0.00 0.00 33.29 3.50
26 27 1.280457 AGGGGTTGCTAAGGTCAGAG 58.720 55.000 0.00 0.00 0.00 3.35
65 66 3.483869 GCGATGGAGGGAGGGCTT 61.484 66.667 0.00 0.00 0.00 4.35
67 68 2.066393 CGATGGAGGGAGGGCTTCA 61.066 63.158 0.00 0.00 0.00 3.02
70 71 2.041265 GGAGGGAGGGCTTCAGGA 59.959 66.667 0.00 0.00 0.00 3.86
71 72 2.069430 GGAGGGAGGGCTTCAGGAG 61.069 68.421 0.00 0.00 0.00 3.69
72 73 2.041928 AGGGAGGGCTTCAGGAGG 59.958 66.667 0.00 0.00 0.00 4.30
73 74 2.285743 GGGAGGGCTTCAGGAGGT 60.286 66.667 0.00 0.00 0.00 3.85
74 75 1.925972 GGGAGGGCTTCAGGAGGTT 60.926 63.158 0.00 0.00 0.00 3.50
75 76 0.620700 GGGAGGGCTTCAGGAGGTTA 60.621 60.000 0.00 0.00 0.00 2.85
76 77 0.833949 GGAGGGCTTCAGGAGGTTAG 59.166 60.000 0.00 0.00 0.00 2.34
77 78 0.833949 GAGGGCTTCAGGAGGTTAGG 59.166 60.000 0.00 0.00 0.00 2.69
78 79 0.621862 AGGGCTTCAGGAGGTTAGGG 60.622 60.000 0.00 0.00 0.00 3.53
79 80 0.914902 GGGCTTCAGGAGGTTAGGGT 60.915 60.000 0.00 0.00 0.00 4.34
80 81 0.992695 GGCTTCAGGAGGTTAGGGTT 59.007 55.000 0.00 0.00 0.00 4.11
81 82 1.354705 GGCTTCAGGAGGTTAGGGTTT 59.645 52.381 0.00 0.00 0.00 3.27
82 83 2.225041 GGCTTCAGGAGGTTAGGGTTTT 60.225 50.000 0.00 0.00 0.00 2.43
83 84 2.820197 GCTTCAGGAGGTTAGGGTTTTG 59.180 50.000 0.00 0.00 0.00 2.44
84 85 3.421844 CTTCAGGAGGTTAGGGTTTTGG 58.578 50.000 0.00 0.00 0.00 3.28
85 86 2.708759 TCAGGAGGTTAGGGTTTTGGA 58.291 47.619 0.00 0.00 0.00 3.53
86 87 2.642807 TCAGGAGGTTAGGGTTTTGGAG 59.357 50.000 0.00 0.00 0.00 3.86
87 88 2.642807 CAGGAGGTTAGGGTTTTGGAGA 59.357 50.000 0.00 0.00 0.00 3.71
93 94 4.008330 GGTTAGGGTTTTGGAGAAGTAGC 58.992 47.826 0.00 0.00 0.00 3.58
113 114 1.521681 GTGCAGCTAGGGTTAGGCG 60.522 63.158 0.00 0.00 0.00 5.52
114 115 2.109181 GCAGCTAGGGTTAGGCGG 59.891 66.667 0.00 0.00 0.00 6.13
137 138 2.511600 GACGGGATGGAGGCAACG 60.512 66.667 0.00 0.00 46.39 4.10
169 238 4.129737 GTAGCGAGGCGTGGCAGA 62.130 66.667 15.79 0.15 0.00 4.26
174 243 4.828925 GAGGCGTGGCAGAGAGGC 62.829 72.222 0.00 0.00 44.50 4.70
184 253 2.438614 AGAGAGGCTAGCGACGCA 60.439 61.111 23.70 7.20 0.00 5.24
186 255 3.052620 GAGAGGCTAGCGACGCACA 62.053 63.158 23.70 8.35 0.00 4.57
187 256 2.126071 GAGGCTAGCGACGCACAA 60.126 61.111 23.70 5.98 0.00 3.33
188 257 2.432628 AGGCTAGCGACGCACAAC 60.433 61.111 23.70 9.47 0.00 3.32
190 259 1.153901 GGCTAGCGACGCACAACTA 60.154 57.895 23.70 3.99 0.00 2.24
195 264 1.805945 GCGACGCACAACTAGGAGG 60.806 63.158 16.42 0.00 0.00 4.30
196 265 1.585006 CGACGCACAACTAGGAGGT 59.415 57.895 0.00 0.00 0.00 3.85
197 266 0.732880 CGACGCACAACTAGGAGGTG 60.733 60.000 0.00 0.39 39.30 4.00
198 267 0.389948 GACGCACAACTAGGAGGTGG 60.390 60.000 11.17 5.67 37.20 4.61
199 268 1.079127 CGCACAACTAGGAGGTGGG 60.079 63.158 11.37 11.37 39.97 4.61
200 269 1.541310 CGCACAACTAGGAGGTGGGA 61.541 60.000 17.15 0.00 39.10 4.37
201 270 0.250513 GCACAACTAGGAGGTGGGAG 59.749 60.000 0.00 0.00 39.10 4.30
202 271 0.250513 CACAACTAGGAGGTGGGAGC 59.749 60.000 0.00 0.00 39.10 4.70
203 272 1.258445 ACAACTAGGAGGTGGGAGCG 61.258 60.000 0.00 0.00 37.20 5.03
204 273 0.970937 CAACTAGGAGGTGGGAGCGA 60.971 60.000 0.00 0.00 0.00 4.93
205 274 0.684805 AACTAGGAGGTGGGAGCGAG 60.685 60.000 0.00 0.00 0.00 5.03
206 275 1.830408 CTAGGAGGTGGGAGCGAGG 60.830 68.421 0.00 0.00 0.00 4.63
209 278 4.154347 GAGGTGGGAGCGAGGCAG 62.154 72.222 0.00 0.00 0.00 4.85
226 295 4.467084 GCGGTGGGAAGGATCGCA 62.467 66.667 0.00 0.00 45.25 5.10
232 301 1.452108 GGGAAGGATCGCAAGGTGG 60.452 63.158 0.00 0.00 38.34 4.61
233 302 2.115291 GGAAGGATCGCAAGGTGGC 61.115 63.158 0.00 0.00 38.47 5.01
243 313 3.706373 AAGGTGGCGTGGCGATCT 61.706 61.111 0.00 0.00 0.00 2.75
244 314 2.355986 AAGGTGGCGTGGCGATCTA 61.356 57.895 0.00 0.00 25.35 1.98
247 317 2.758327 TGGCGTGGCGATCTAGGT 60.758 61.111 0.00 0.00 0.00 3.08
248 318 2.279517 GGCGTGGCGATCTAGGTG 60.280 66.667 0.00 0.00 0.00 4.00
250 320 2.782222 GCGTGGCGATCTAGGTGGA 61.782 63.158 0.00 0.00 0.00 4.02
256 326 1.360551 CGATCTAGGTGGAGGCGTG 59.639 63.158 0.00 0.00 0.00 5.34
258 328 1.676678 GATCTAGGTGGAGGCGTGCA 61.677 60.000 0.00 0.00 0.00 4.57
259 329 1.264749 ATCTAGGTGGAGGCGTGCAA 61.265 55.000 0.97 0.00 0.00 4.08
315 399 2.047274 GCAGCTAGGGTTGCGACA 60.047 61.111 6.39 0.00 39.64 4.35
318 402 2.048503 GCTAGGGTTGCGACACGT 60.049 61.111 6.39 0.04 33.19 4.49
321 405 2.149803 CTAGGGTTGCGACACGTGGA 62.150 60.000 21.57 0.00 33.19 4.02
325 409 1.885850 GTTGCGACACGTGGAAGGT 60.886 57.895 21.57 0.00 33.66 3.50
330 414 0.170561 CGACACGTGGAAGGTCCTAG 59.829 60.000 21.57 0.00 37.46 3.02
342 426 5.088026 GGAAGGTCCTAGTTAGGCTGATAT 58.912 45.833 0.00 0.00 43.31 1.63
346 430 5.719085 AGGTCCTAGTTAGGCTGATATCATG 59.281 44.000 5.72 2.04 43.31 3.07
351 435 7.831690 TCCTAGTTAGGCTGATATCATGTAGAG 59.168 40.741 5.72 0.00 43.31 2.43
360 444 7.559533 GGCTGATATCATGTAGAGGATTAGAGA 59.440 40.741 5.72 0.00 0.00 3.10
450 536 8.891671 GGTAACCACGTCCTCAATTATATAAA 57.108 34.615 0.00 0.00 0.00 1.40
452 538 8.985805 GTAACCACGTCCTCAATTATATAAAGG 58.014 37.037 0.00 2.51 0.00 3.11
457 543 8.148351 CACGTCCTCAATTATATAAAGGAGGAA 58.852 37.037 30.69 20.38 43.72 3.36
473 559 0.034337 GGAAGACGGCTTGTGGTACA 59.966 55.000 9.15 0.00 33.61 2.90
503 589 8.908786 AATATACATGCAATATATTCCCTCCG 57.091 34.615 15.77 0.00 32.21 4.63
504 590 4.640771 ACATGCAATATATTCCCTCCGT 57.359 40.909 0.00 0.00 0.00 4.69
505 591 4.985538 ACATGCAATATATTCCCTCCGTT 58.014 39.130 0.00 0.00 0.00 4.44
506 592 5.003804 ACATGCAATATATTCCCTCCGTTC 58.996 41.667 0.00 0.00 0.00 3.95
507 593 4.015872 TGCAATATATTCCCTCCGTTCC 57.984 45.455 0.00 0.00 0.00 3.62
508 594 3.650942 TGCAATATATTCCCTCCGTTCCT 59.349 43.478 0.00 0.00 0.00 3.36
509 595 4.841813 TGCAATATATTCCCTCCGTTCCTA 59.158 41.667 0.00 0.00 0.00 2.94
510 596 5.308497 TGCAATATATTCCCTCCGTTCCTAA 59.692 40.000 0.00 0.00 0.00 2.69
511 597 6.183361 TGCAATATATTCCCTCCGTTCCTAAA 60.183 38.462 0.00 0.00 0.00 1.85
512 598 6.884836 GCAATATATTCCCTCCGTTCCTAAAT 59.115 38.462 0.00 0.00 0.00 1.40
513 599 7.393515 GCAATATATTCCCTCCGTTCCTAAATT 59.606 37.037 0.00 0.00 0.00 1.82
514 600 9.297037 CAATATATTCCCTCCGTTCCTAAATTT 57.703 33.333 0.00 0.00 0.00 1.82
515 601 8.863872 ATATATTCCCTCCGTTCCTAAATTTG 57.136 34.615 0.00 0.00 0.00 2.32
516 602 4.376225 TTCCCTCCGTTCCTAAATTTGT 57.624 40.909 0.00 0.00 0.00 2.83
517 603 3.946606 TCCCTCCGTTCCTAAATTTGTC 58.053 45.455 0.00 0.00 0.00 3.18
518 604 3.585732 TCCCTCCGTTCCTAAATTTGTCT 59.414 43.478 0.00 0.00 0.00 3.41
519 605 4.042435 TCCCTCCGTTCCTAAATTTGTCTT 59.958 41.667 0.00 0.00 0.00 3.01
520 606 4.765339 CCCTCCGTTCCTAAATTTGTCTTT 59.235 41.667 0.00 0.00 0.00 2.52
521 607 5.106277 CCCTCCGTTCCTAAATTTGTCTTTC 60.106 44.000 0.00 0.00 0.00 2.62
522 608 5.705905 CCTCCGTTCCTAAATTTGTCTTTCT 59.294 40.000 0.00 0.00 0.00 2.52
523 609 6.877322 CCTCCGTTCCTAAATTTGTCTTTCTA 59.123 38.462 0.00 0.00 0.00 2.10
524 610 7.064728 CCTCCGTTCCTAAATTTGTCTTTCTAG 59.935 40.741 0.00 0.00 0.00 2.43
525 611 7.673180 TCCGTTCCTAAATTTGTCTTTCTAGA 58.327 34.615 0.00 0.00 0.00 2.43
542 628 9.466497 TCTTTCTAGACATTTCAAATGGCTATT 57.534 29.630 23.50 3.92 38.80 1.73
545 631 9.679661 TTCTAGACATTTCAAATGGCTATTACA 57.320 29.630 23.50 5.75 38.80 2.41
546 632 9.851686 TCTAGACATTTCAAATGGCTATTACAT 57.148 29.630 23.50 1.77 38.80 2.29
547 633 9.888878 CTAGACATTTCAAATGGCTATTACATG 57.111 33.333 23.50 9.24 38.80 3.21
548 634 7.205297 AGACATTTCAAATGGCTATTACATGC 58.795 34.615 17.52 0.00 35.20 4.06
549 635 5.978919 ACATTTCAAATGGCTATTACATGCG 59.021 36.000 14.70 0.00 0.00 4.73
550 636 4.566545 TTCAAATGGCTATTACATGCGG 57.433 40.909 0.00 0.00 0.00 5.69
551 637 3.814625 TCAAATGGCTATTACATGCGGA 58.185 40.909 0.00 0.00 0.00 5.54
552 638 4.397420 TCAAATGGCTATTACATGCGGAT 58.603 39.130 0.00 0.00 0.00 4.18
553 639 4.216042 TCAAATGGCTATTACATGCGGATG 59.784 41.667 16.07 16.07 35.49 3.51
554 640 1.522668 TGGCTATTACATGCGGATGC 58.477 50.000 17.63 1.07 43.20 3.91
569 655 5.362556 GCGGATGCATGTAGACATATTTT 57.637 39.130 2.46 0.00 42.15 1.82
570 656 6.480524 GCGGATGCATGTAGACATATTTTA 57.519 37.500 2.46 0.00 42.15 1.52
571 657 6.898041 GCGGATGCATGTAGACATATTTTAA 58.102 36.000 2.46 0.00 42.15 1.52
572 658 7.359595 GCGGATGCATGTAGACATATTTTAAA 58.640 34.615 2.46 0.00 42.15 1.52
573 659 7.535258 GCGGATGCATGTAGACATATTTTAAAG 59.465 37.037 2.46 0.00 42.15 1.85
574 660 8.559536 CGGATGCATGTAGACATATTTTAAAGT 58.440 33.333 2.46 0.00 34.26 2.66
597 683 8.092521 AGTATAGATTCATTCATTTTGCTCCG 57.907 34.615 0.00 0.00 0.00 4.63
598 684 6.949352 ATAGATTCATTCATTTTGCTCCGT 57.051 33.333 0.00 0.00 0.00 4.69
599 685 8.988934 GTATAGATTCATTCATTTTGCTCCGTA 58.011 33.333 0.00 0.00 0.00 4.02
600 686 6.949352 AGATTCATTCATTTTGCTCCGTAT 57.051 33.333 0.00 0.00 0.00 3.06
601 687 6.732154 AGATTCATTCATTTTGCTCCGTATG 58.268 36.000 0.00 0.00 0.00 2.39
602 688 5.895636 TTCATTCATTTTGCTCCGTATGT 57.104 34.783 0.00 0.00 0.00 2.29
603 689 6.993786 TTCATTCATTTTGCTCCGTATGTA 57.006 33.333 0.00 0.00 0.00 2.29
604 690 6.603237 TCATTCATTTTGCTCCGTATGTAG 57.397 37.500 0.00 0.00 0.00 2.74
605 691 6.112734 TCATTCATTTTGCTCCGTATGTAGT 58.887 36.000 0.00 0.00 0.00 2.73
606 692 6.597672 TCATTCATTTTGCTCCGTATGTAGTT 59.402 34.615 0.00 0.00 0.00 2.24
607 693 7.766738 TCATTCATTTTGCTCCGTATGTAGTTA 59.233 33.333 0.00 0.00 0.00 2.24
608 694 8.559536 CATTCATTTTGCTCCGTATGTAGTTAT 58.440 33.333 0.00 0.00 0.00 1.89
609 695 8.500753 TTCATTTTGCTCCGTATGTAGTTATT 57.499 30.769 0.00 0.00 0.00 1.40
610 696 8.500753 TCATTTTGCTCCGTATGTAGTTATTT 57.499 30.769 0.00 0.00 0.00 1.40
611 697 8.394877 TCATTTTGCTCCGTATGTAGTTATTTG 58.605 33.333 0.00 0.00 0.00 2.32
612 698 7.675962 TTTTGCTCCGTATGTAGTTATTTGT 57.324 32.000 0.00 0.00 0.00 2.83
613 699 7.675962 TTTGCTCCGTATGTAGTTATTTGTT 57.324 32.000 0.00 0.00 0.00 2.83
614 700 6.656314 TGCTCCGTATGTAGTTATTTGTTG 57.344 37.500 0.00 0.00 0.00 3.33
615 701 6.399743 TGCTCCGTATGTAGTTATTTGTTGA 58.600 36.000 0.00 0.00 0.00 3.18
616 702 6.874664 TGCTCCGTATGTAGTTATTTGTTGAA 59.125 34.615 0.00 0.00 0.00 2.69
617 703 7.388224 TGCTCCGTATGTAGTTATTTGTTGAAA 59.612 33.333 0.00 0.00 0.00 2.69
618 704 8.395633 GCTCCGTATGTAGTTATTTGTTGAAAT 58.604 33.333 0.00 0.00 35.83 2.17
619 705 9.702726 CTCCGTATGTAGTTATTTGTTGAAATG 57.297 33.333 0.00 0.00 33.63 2.32
620 706 8.178964 TCCGTATGTAGTTATTTGTTGAAATGC 58.821 33.333 0.00 0.00 33.63 3.56
621 707 7.431084 CCGTATGTAGTTATTTGTTGAAATGCC 59.569 37.037 0.00 0.00 33.63 4.40
622 708 8.181573 CGTATGTAGTTATTTGTTGAAATGCCT 58.818 33.333 0.00 0.00 33.63 4.75
625 711 8.856153 TGTAGTTATTTGTTGAAATGCCTAGA 57.144 30.769 0.00 0.00 33.63 2.43
626 712 9.290988 TGTAGTTATTTGTTGAAATGCCTAGAA 57.709 29.630 0.00 0.00 33.63 2.10
629 715 9.077885 AGTTATTTGTTGAAATGCCTAGAAAGA 57.922 29.630 0.00 0.00 33.63 2.52
630 716 9.860898 GTTATTTGTTGAAATGCCTAGAAAGAT 57.139 29.630 0.00 0.00 33.63 2.40
634 720 8.635765 TTGTTGAAATGCCTAGAAAGATAAGT 57.364 30.769 0.00 0.00 0.00 2.24
635 721 9.733556 TTGTTGAAATGCCTAGAAAGATAAGTA 57.266 29.630 0.00 0.00 0.00 2.24
636 722 9.905713 TGTTGAAATGCCTAGAAAGATAAGTAT 57.094 29.630 0.00 0.00 0.00 2.12
641 727 8.697507 AATGCCTAGAAAGATAAGTATTTGGG 57.302 34.615 0.00 0.00 0.00 4.12
642 728 7.446106 TGCCTAGAAAGATAAGTATTTGGGA 57.554 36.000 0.00 0.00 0.00 4.37
643 729 8.045720 TGCCTAGAAAGATAAGTATTTGGGAT 57.954 34.615 0.00 0.00 0.00 3.85
644 730 9.166222 TGCCTAGAAAGATAAGTATTTGGGATA 57.834 33.333 0.00 0.00 0.00 2.59
655 741 9.734984 ATAAGTATTTGGGATATTTAGGAACGG 57.265 33.333 0.00 0.00 0.00 4.44
656 742 7.383156 AGTATTTGGGATATTTAGGAACGGA 57.617 36.000 0.00 0.00 0.00 4.69
657 743 7.450903 AGTATTTGGGATATTTAGGAACGGAG 58.549 38.462 0.00 0.00 0.00 4.63
658 744 4.699925 TTGGGATATTTAGGAACGGAGG 57.300 45.455 0.00 0.00 0.00 4.30
659 745 2.976882 TGGGATATTTAGGAACGGAGGG 59.023 50.000 0.00 0.00 0.00 4.30
660 746 3.245441 GGGATATTTAGGAACGGAGGGA 58.755 50.000 0.00 0.00 0.00 4.20
661 747 3.261137 GGGATATTTAGGAACGGAGGGAG 59.739 52.174 0.00 0.00 0.00 4.30
662 748 3.902467 GGATATTTAGGAACGGAGGGAGT 59.098 47.826 0.00 0.00 0.00 3.85
663 749 5.082425 GGATATTTAGGAACGGAGGGAGTA 58.918 45.833 0.00 0.00 0.00 2.59
664 750 5.047448 GGATATTTAGGAACGGAGGGAGTAC 60.047 48.000 0.00 0.00 0.00 2.73
665 751 2.905415 TTAGGAACGGAGGGAGTACA 57.095 50.000 0.00 0.00 0.00 2.90
666 752 3.393426 TTAGGAACGGAGGGAGTACAT 57.607 47.619 0.00 0.00 0.00 2.29
667 753 4.524802 TTAGGAACGGAGGGAGTACATA 57.475 45.455 0.00 0.00 0.00 2.29
668 754 3.614568 AGGAACGGAGGGAGTACATAT 57.385 47.619 0.00 0.00 0.00 1.78
669 755 3.498334 AGGAACGGAGGGAGTACATATC 58.502 50.000 0.00 0.00 0.00 1.63
670 756 3.140519 AGGAACGGAGGGAGTACATATCT 59.859 47.826 0.00 0.00 0.00 1.98
671 757 3.506844 GGAACGGAGGGAGTACATATCTC 59.493 52.174 0.00 0.00 0.00 2.75
672 758 3.878237 ACGGAGGGAGTACATATCTCA 57.122 47.619 0.00 0.00 34.04 3.27
673 759 4.180377 ACGGAGGGAGTACATATCTCAA 57.820 45.455 0.00 0.00 34.04 3.02
674 760 3.890147 ACGGAGGGAGTACATATCTCAAC 59.110 47.826 0.00 0.00 34.04 3.18
675 761 3.889538 CGGAGGGAGTACATATCTCAACA 59.110 47.826 0.00 0.00 34.04 3.33
788 1075 2.851588 TAGGTGCCACTGCCACCA 60.852 61.111 11.64 0.00 39.60 4.17
827 1114 1.750297 GTGTACCCCACGTGTCCTT 59.250 57.895 15.65 0.00 33.61 3.36
829 1116 1.049855 TGTACCCCACGTGTCCTTGT 61.050 55.000 15.65 6.37 0.00 3.16
873 1160 0.669318 GACGTCCGAAAGACATGCCA 60.669 55.000 3.51 0.00 46.69 4.92
963 1254 1.003118 TGGCCATAGTGGTGAACTGAC 59.997 52.381 0.00 0.00 40.46 3.51
997 1292 4.162690 AAGGCACGCCGGAGATCC 62.163 66.667 13.83 12.18 41.95 3.36
1009 1304 1.703014 GGAGATCCAGATGGGCTGCA 61.703 60.000 0.50 0.00 43.50 4.41
1224 1519 4.748679 GCCTGCAACTGCGCTTCG 62.749 66.667 9.73 0.00 45.83 3.79
1285 1580 0.169672 GCGCCACTAGTCGTGAACTA 59.830 55.000 5.14 0.00 46.81 2.24
1360 1655 2.759191 CCGTGATGAGTCATATGTGGG 58.241 52.381 5.38 0.00 36.60 4.61
1363 1658 1.151668 GATGAGTCATATGTGGGCGC 58.848 55.000 5.38 0.00 0.00 6.53
1383 1679 2.796032 GCGTCGTGTGTATTACCTACCC 60.796 54.545 0.00 0.00 0.00 3.69
1426 1722 9.490379 AAGAACGAATAAATAGTTTCTGTGAGT 57.510 29.630 0.00 0.00 0.00 3.41
1446 1742 8.553696 TGTGAGTTATTTTCTTCGTTCCTAAAC 58.446 33.333 0.00 0.00 0.00 2.01
1506 1802 9.816354 ACTTGTTGCAAAATATTTGTACTTCTT 57.184 25.926 0.00 0.00 0.00 2.52
1726 2026 0.759346 GGACCCGATCTAAGCCACAT 59.241 55.000 0.00 0.00 0.00 3.21
1753 2075 1.268352 GCGCTTGTTGTGATACCCAAA 59.732 47.619 0.00 0.00 0.00 3.28
1766 2088 1.672356 CCCAAACTGAGCAGGACCG 60.672 63.158 2.20 0.00 0.00 4.79
1880 2215 1.270305 CGTCTTTCCTCTGTTGCTCCA 60.270 52.381 0.00 0.00 0.00 3.86
1929 2265 7.419204 TGGTTTAGGTTATGAGTTTTTCGTTG 58.581 34.615 0.00 0.00 0.00 4.10
1930 2266 7.067251 TGGTTTAGGTTATGAGTTTTTCGTTGT 59.933 33.333 0.00 0.00 0.00 3.32
1931 2267 7.916977 GGTTTAGGTTATGAGTTTTTCGTTGTT 59.083 33.333 0.00 0.00 0.00 2.83
1932 2268 9.292846 GTTTAGGTTATGAGTTTTTCGTTGTTT 57.707 29.630 0.00 0.00 0.00 2.83
1933 2269 9.505995 TTTAGGTTATGAGTTTTTCGTTGTTTC 57.494 29.630 0.00 0.00 0.00 2.78
1934 2270 7.329588 AGGTTATGAGTTTTTCGTTGTTTCT 57.670 32.000 0.00 0.00 0.00 2.52
1935 2271 8.441312 AGGTTATGAGTTTTTCGTTGTTTCTA 57.559 30.769 0.00 0.00 0.00 2.10
1936 2272 8.895737 AGGTTATGAGTTTTTCGTTGTTTCTAA 58.104 29.630 0.00 0.00 0.00 2.10
1937 2273 9.673454 GGTTATGAGTTTTTCGTTGTTTCTAAT 57.327 29.630 0.00 0.00 0.00 1.73
1949 2285 8.208718 TCGTTGTTTCTAATTTCATAGATGGG 57.791 34.615 0.00 0.00 32.20 4.00
1950 2286 7.282224 TCGTTGTTTCTAATTTCATAGATGGGG 59.718 37.037 0.00 0.00 32.20 4.96
1953 2289 6.321181 TGTTTCTAATTTCATAGATGGGGCAC 59.679 38.462 0.00 0.00 32.20 5.01
1955 2291 6.266131 TCTAATTTCATAGATGGGGCACTT 57.734 37.500 0.00 0.00 0.00 3.16
1959 2295 3.060479 TCATAGATGGGGCACTTAGGT 57.940 47.619 0.00 0.00 0.00 3.08
1969 2305 1.090052 GCACTTAGGTGGATGGCGAC 61.090 60.000 7.15 0.00 43.18 5.19
1974 2310 2.292794 TAGGTGGATGGCGACGCTTC 62.293 60.000 20.77 16.13 0.00 3.86
1981 2317 1.527311 GATGGCGACGCTTCTTATTCC 59.473 52.381 20.77 0.00 0.00 3.01
1993 2329 5.977129 CGCTTCTTATTCCAGTTTGTGTTTT 59.023 36.000 0.00 0.00 0.00 2.43
1994 2330 6.074888 CGCTTCTTATTCCAGTTTGTGTTTTG 60.075 38.462 0.00 0.00 0.00 2.44
1995 2331 6.978080 GCTTCTTATTCCAGTTTGTGTTTTGA 59.022 34.615 0.00 0.00 0.00 2.69
1996 2332 7.168135 GCTTCTTATTCCAGTTTGTGTTTTGAG 59.832 37.037 0.00 0.00 0.00 3.02
1997 2333 6.503524 TCTTATTCCAGTTTGTGTTTTGAGC 58.496 36.000 0.00 0.00 0.00 4.26
1998 2334 6.321181 TCTTATTCCAGTTTGTGTTTTGAGCT 59.679 34.615 0.00 0.00 0.00 4.09
2022 2358 4.031201 CGAGCTCTGATTTTTCTCGAGTTC 59.969 45.833 13.13 4.05 46.59 3.01
2031 2367 3.653539 TTTCTCGAGTTCGTTCATGGA 57.346 42.857 13.13 0.00 40.80 3.41
2032 2368 2.631418 TCTCGAGTTCGTTCATGGAC 57.369 50.000 13.13 0.00 40.80 4.02
2033 2369 1.135774 TCTCGAGTTCGTTCATGGACG 60.136 52.381 20.90 20.90 44.06 4.79
2034 2370 0.594602 TCGAGTTCGTTCATGGACGT 59.405 50.000 25.27 7.16 43.23 4.34
2035 2371 1.805943 TCGAGTTCGTTCATGGACGTA 59.194 47.619 25.27 14.28 43.23 3.57
2036 2372 1.909532 CGAGTTCGTTCATGGACGTAC 59.090 52.381 24.18 24.18 43.23 3.67
2038 2374 3.655276 AGTTCGTTCATGGACGTACTT 57.345 42.857 27.40 15.00 46.69 2.24
2039 2375 3.314553 AGTTCGTTCATGGACGTACTTG 58.685 45.455 27.40 7.34 46.69 3.16
2040 2376 3.005050 AGTTCGTTCATGGACGTACTTGA 59.995 43.478 27.40 12.11 46.69 3.02
2041 2377 2.937591 TCGTTCATGGACGTACTTGAC 58.062 47.619 25.27 10.09 43.23 3.18
2052 2388 1.760192 GTACTTGACGGAGCCCTAGA 58.240 55.000 0.00 0.00 0.00 2.43
2053 2389 1.677052 GTACTTGACGGAGCCCTAGAG 59.323 57.143 0.00 0.00 0.00 2.43
2054 2390 0.039911 ACTTGACGGAGCCCTAGAGT 59.960 55.000 0.00 0.00 0.00 3.24
2055 2391 1.284198 ACTTGACGGAGCCCTAGAGTA 59.716 52.381 0.00 0.00 0.00 2.59
2056 2392 1.950909 CTTGACGGAGCCCTAGAGTAG 59.049 57.143 0.00 0.00 0.00 2.57
2057 2393 1.210538 TGACGGAGCCCTAGAGTAGA 58.789 55.000 0.00 0.00 0.00 2.59
2058 2394 1.775459 TGACGGAGCCCTAGAGTAGAT 59.225 52.381 0.00 0.00 0.00 1.98
2059 2395 2.175069 TGACGGAGCCCTAGAGTAGATT 59.825 50.000 0.00 0.00 0.00 2.40
2060 2396 2.815503 GACGGAGCCCTAGAGTAGATTC 59.184 54.545 0.00 0.00 0.00 2.52
2061 2397 1.807742 CGGAGCCCTAGAGTAGATTCG 59.192 57.143 0.00 0.00 0.00 3.34
2062 2398 2.811136 CGGAGCCCTAGAGTAGATTCGT 60.811 54.545 0.00 0.00 0.00 3.85
2063 2399 3.556633 CGGAGCCCTAGAGTAGATTCGTA 60.557 52.174 0.00 0.00 0.00 3.43
2064 2400 4.004982 GGAGCCCTAGAGTAGATTCGTAG 58.995 52.174 0.00 0.00 0.00 3.51
2065 2401 4.262981 GGAGCCCTAGAGTAGATTCGTAGA 60.263 50.000 0.00 0.00 0.00 2.59
2066 2402 5.493809 GAGCCCTAGAGTAGATTCGTAGAT 58.506 45.833 0.00 0.00 35.04 1.98
2067 2403 5.883180 AGCCCTAGAGTAGATTCGTAGATT 58.117 41.667 0.00 0.00 35.04 2.40
2068 2404 5.941647 AGCCCTAGAGTAGATTCGTAGATTC 59.058 44.000 0.00 0.00 37.19 2.52
2069 2405 5.163834 GCCCTAGAGTAGATTCGTAGATTCG 60.164 48.000 0.00 0.00 41.27 3.34
2070 2406 5.933463 CCCTAGAGTAGATTCGTAGATTCGT 59.067 44.000 0.00 0.00 41.27 3.85
2071 2407 6.128499 CCCTAGAGTAGATTCGTAGATTCGTG 60.128 46.154 0.00 0.00 41.27 4.35
2072 2408 6.424509 CCTAGAGTAGATTCGTAGATTCGTGT 59.575 42.308 0.00 0.00 41.27 4.49
2073 2409 7.598118 CCTAGAGTAGATTCGTAGATTCGTGTA 59.402 40.741 0.00 0.00 41.27 2.90
2074 2410 7.410800 AGAGTAGATTCGTAGATTCGTGTAG 57.589 40.000 0.00 0.00 41.27 2.74
2075 2411 6.985645 AGAGTAGATTCGTAGATTCGTGTAGT 59.014 38.462 0.00 0.00 41.27 2.73
2076 2412 7.169645 AGAGTAGATTCGTAGATTCGTGTAGTC 59.830 40.741 0.00 0.00 41.27 2.59
2077 2413 6.985645 AGTAGATTCGTAGATTCGTGTAGTCT 59.014 38.462 0.00 0.00 41.27 3.24
2078 2414 6.680874 AGATTCGTAGATTCGTGTAGTCTT 57.319 37.500 0.00 0.00 41.27 3.01
2079 2415 7.086230 AGATTCGTAGATTCGTGTAGTCTTT 57.914 36.000 0.00 0.00 41.27 2.52
2080 2416 7.536855 AGATTCGTAGATTCGTGTAGTCTTTT 58.463 34.615 0.00 0.00 41.27 2.27
2081 2417 8.027771 AGATTCGTAGATTCGTGTAGTCTTTTT 58.972 33.333 0.00 0.00 41.27 1.94
2082 2418 6.922980 TCGTAGATTCGTGTAGTCTTTTTG 57.077 37.500 0.00 0.00 0.00 2.44
2083 2419 5.860182 TCGTAGATTCGTGTAGTCTTTTTGG 59.140 40.000 0.00 0.00 0.00 3.28
2084 2420 5.061808 CGTAGATTCGTGTAGTCTTTTTGGG 59.938 44.000 0.00 0.00 0.00 4.12
2085 2421 4.324267 AGATTCGTGTAGTCTTTTTGGGG 58.676 43.478 0.00 0.00 0.00 4.96
2086 2422 1.886886 TCGTGTAGTCTTTTTGGGGC 58.113 50.000 0.00 0.00 0.00 5.80
2087 2423 0.515564 CGTGTAGTCTTTTTGGGGCG 59.484 55.000 0.00 0.00 0.00 6.13
2088 2424 1.874739 CGTGTAGTCTTTTTGGGGCGA 60.875 52.381 0.00 0.00 0.00 5.54
2089 2425 2.433436 GTGTAGTCTTTTTGGGGCGAT 58.567 47.619 0.00 0.00 0.00 4.58
2090 2426 2.161609 GTGTAGTCTTTTTGGGGCGATG 59.838 50.000 0.00 0.00 0.00 3.84
2091 2427 2.039216 TGTAGTCTTTTTGGGGCGATGA 59.961 45.455 0.00 0.00 0.00 2.92
2092 2428 1.826385 AGTCTTTTTGGGGCGATGAG 58.174 50.000 0.00 0.00 0.00 2.90
2093 2429 1.351017 AGTCTTTTTGGGGCGATGAGA 59.649 47.619 0.00 0.00 0.00 3.27
2094 2430 2.025887 AGTCTTTTTGGGGCGATGAGAT 60.026 45.455 0.00 0.00 0.00 2.75
2095 2431 2.755103 GTCTTTTTGGGGCGATGAGATT 59.245 45.455 0.00 0.00 0.00 2.40
2096 2432 3.193479 GTCTTTTTGGGGCGATGAGATTT 59.807 43.478 0.00 0.00 0.00 2.17
2097 2433 3.193267 TCTTTTTGGGGCGATGAGATTTG 59.807 43.478 0.00 0.00 0.00 2.32
2098 2434 1.473258 TTTGGGGCGATGAGATTTGG 58.527 50.000 0.00 0.00 0.00 3.28
2099 2435 0.331278 TTGGGGCGATGAGATTTGGT 59.669 50.000 0.00 0.00 0.00 3.67
2100 2436 0.107214 TGGGGCGATGAGATTTGGTC 60.107 55.000 0.00 0.00 0.00 4.02
2101 2437 0.181350 GGGGCGATGAGATTTGGTCT 59.819 55.000 0.00 0.00 40.81 3.85
2102 2438 1.408822 GGGGCGATGAGATTTGGTCTT 60.409 52.381 0.00 0.00 37.29 3.01
2103 2439 1.943340 GGGCGATGAGATTTGGTCTTC 59.057 52.381 0.00 0.00 37.29 2.87
2104 2440 2.420687 GGGCGATGAGATTTGGTCTTCT 60.421 50.000 0.00 0.00 37.29 2.85
2105 2441 3.274288 GGCGATGAGATTTGGTCTTCTT 58.726 45.455 0.00 0.00 37.29 2.52
2106 2442 3.064545 GGCGATGAGATTTGGTCTTCTTG 59.935 47.826 0.00 0.00 37.29 3.02
2107 2443 3.935203 GCGATGAGATTTGGTCTTCTTGA 59.065 43.478 0.00 0.00 37.29 3.02
2108 2444 4.033817 GCGATGAGATTTGGTCTTCTTGAG 59.966 45.833 0.00 0.00 37.29 3.02
2109 2445 4.033817 CGATGAGATTTGGTCTTCTTGAGC 59.966 45.833 0.00 0.00 43.03 4.26
2110 2446 3.679389 TGAGATTTGGTCTTCTTGAGCC 58.321 45.455 0.00 0.00 42.12 4.70
2111 2447 3.013219 GAGATTTGGTCTTCTTGAGCCC 58.987 50.000 0.00 0.00 42.12 5.19
2112 2448 2.095461 GATTTGGTCTTCTTGAGCCCC 58.905 52.381 0.00 0.00 42.12 5.80
2113 2449 0.850100 TTTGGTCTTCTTGAGCCCCA 59.150 50.000 0.00 0.00 42.12 4.96
2114 2450 0.401738 TTGGTCTTCTTGAGCCCCAG 59.598 55.000 0.00 0.00 42.12 4.45
2115 2451 0.473694 TGGTCTTCTTGAGCCCCAGA 60.474 55.000 0.00 0.00 42.12 3.86
2116 2452 0.251634 GGTCTTCTTGAGCCCCAGAG 59.748 60.000 0.00 0.00 37.22 3.35
2117 2453 0.980423 GTCTTCTTGAGCCCCAGAGT 59.020 55.000 0.00 0.00 0.00 3.24
2118 2454 2.180276 GTCTTCTTGAGCCCCAGAGTA 58.820 52.381 0.00 0.00 0.00 2.59
2119 2455 2.167487 GTCTTCTTGAGCCCCAGAGTAG 59.833 54.545 0.00 0.00 0.00 2.57
2120 2456 2.043115 TCTTCTTGAGCCCCAGAGTAGA 59.957 50.000 0.00 0.00 0.00 2.59
2121 2457 2.856760 TCTTGAGCCCCAGAGTAGAT 57.143 50.000 0.00 0.00 0.00 1.98
2122 2458 3.121929 TCTTGAGCCCCAGAGTAGATT 57.878 47.619 0.00 0.00 0.00 2.40
2123 2459 3.454858 TCTTGAGCCCCAGAGTAGATTT 58.545 45.455 0.00 0.00 0.00 2.17
2124 2460 3.198635 TCTTGAGCCCCAGAGTAGATTTG 59.801 47.826 0.00 0.00 0.00 2.32
2125 2461 1.839994 TGAGCCCCAGAGTAGATTTGG 59.160 52.381 0.00 0.00 0.00 3.28
2126 2462 1.840635 GAGCCCCAGAGTAGATTTGGT 59.159 52.381 0.00 0.00 0.00 3.67
2127 2463 1.840635 AGCCCCAGAGTAGATTTGGTC 59.159 52.381 0.00 0.00 0.00 4.02
2128 2464 1.840635 GCCCCAGAGTAGATTTGGTCT 59.159 52.381 0.00 0.00 41.11 3.85
2129 2465 2.239907 GCCCCAGAGTAGATTTGGTCTT 59.760 50.000 0.00 0.00 38.42 3.01
2130 2466 3.308473 GCCCCAGAGTAGATTTGGTCTTT 60.308 47.826 0.00 0.00 38.42 2.52
2131 2467 4.811063 GCCCCAGAGTAGATTTGGTCTTTT 60.811 45.833 0.00 0.00 38.42 2.27
2132 2468 5.325239 CCCCAGAGTAGATTTGGTCTTTTT 58.675 41.667 0.00 0.00 38.42 1.94
2133 2469 5.183904 CCCCAGAGTAGATTTGGTCTTTTTG 59.816 44.000 0.00 0.00 38.42 2.44
2134 2470 6.003950 CCCAGAGTAGATTTGGTCTTTTTGA 58.996 40.000 0.00 0.00 38.42 2.69
2135 2471 6.660949 CCCAGAGTAGATTTGGTCTTTTTGAT 59.339 38.462 0.00 0.00 38.42 2.57
2136 2472 7.829211 CCCAGAGTAGATTTGGTCTTTTTGATA 59.171 37.037 0.00 0.00 38.42 2.15
2137 2473 8.887717 CCAGAGTAGATTTGGTCTTTTTGATAG 58.112 37.037 0.00 0.00 38.42 2.08
2138 2474 9.442047 CAGAGTAGATTTGGTCTTTTTGATAGT 57.558 33.333 0.00 0.00 38.42 2.12
2139 2475 9.660180 AGAGTAGATTTGGTCTTTTTGATAGTC 57.340 33.333 0.00 0.00 38.42 2.59
2140 2476 9.660180 GAGTAGATTTGGTCTTTTTGATAGTCT 57.340 33.333 0.00 0.00 38.42 3.24
2144 2480 9.579932 AGATTTGGTCTTTTTGATAGTCTTCTT 57.420 29.630 0.00 0.00 31.47 2.52
2145 2481 9.617975 GATTTGGTCTTTTTGATAGTCTTCTTG 57.382 33.333 0.00 0.00 0.00 3.02
2146 2482 8.746052 TTTGGTCTTTTTGATAGTCTTCTTGA 57.254 30.769 0.00 0.00 0.00 3.02
2147 2483 7.730364 TGGTCTTTTTGATAGTCTTCTTGAC 57.270 36.000 0.00 0.00 45.67 3.18
2154 2490 4.600207 GTCTTCTTGACGGAGCCC 57.400 61.111 0.00 0.00 35.81 5.19
2155 2491 1.976112 GTCTTCTTGACGGAGCCCT 59.024 57.895 0.00 0.00 35.81 5.19
2156 2492 1.183549 GTCTTCTTGACGGAGCCCTA 58.816 55.000 0.00 0.00 35.81 3.53
2157 2493 1.135333 GTCTTCTTGACGGAGCCCTAG 59.865 57.143 0.00 0.00 35.81 3.02
2158 2494 1.005569 TCTTCTTGACGGAGCCCTAGA 59.994 52.381 0.00 0.00 0.00 2.43
2159 2495 1.407258 CTTCTTGACGGAGCCCTAGAG 59.593 57.143 0.00 0.00 0.00 2.43
2160 2496 0.331954 TCTTGACGGAGCCCTAGAGT 59.668 55.000 0.00 0.00 0.00 3.24
2161 2497 1.562942 TCTTGACGGAGCCCTAGAGTA 59.437 52.381 0.00 0.00 0.00 2.59
2162 2498 2.025605 TCTTGACGGAGCCCTAGAGTAA 60.026 50.000 0.00 0.00 0.00 2.24
2163 2499 1.760192 TGACGGAGCCCTAGAGTAAC 58.240 55.000 0.00 0.00 0.00 2.50
2164 2500 1.005097 TGACGGAGCCCTAGAGTAACA 59.995 52.381 0.00 0.00 0.00 2.41
2165 2501 2.097825 GACGGAGCCCTAGAGTAACAA 58.902 52.381 0.00 0.00 0.00 2.83
2166 2502 2.099427 GACGGAGCCCTAGAGTAACAAG 59.901 54.545 0.00 0.00 0.00 3.16
2167 2503 2.291411 ACGGAGCCCTAGAGTAACAAGA 60.291 50.000 0.00 0.00 0.00 3.02
2168 2504 2.959707 CGGAGCCCTAGAGTAACAAGAT 59.040 50.000 0.00 0.00 0.00 2.40
2169 2505 3.385111 CGGAGCCCTAGAGTAACAAGATT 59.615 47.826 0.00 0.00 0.00 2.40
2170 2506 4.141914 CGGAGCCCTAGAGTAACAAGATTT 60.142 45.833 0.00 0.00 0.00 2.17
2171 2507 5.119694 GGAGCCCTAGAGTAACAAGATTTG 58.880 45.833 0.00 0.00 0.00 2.32
2172 2508 5.104900 GGAGCCCTAGAGTAACAAGATTTGA 60.105 44.000 0.00 0.00 0.00 2.69
2173 2509 6.408662 GGAGCCCTAGAGTAACAAGATTTGAT 60.409 42.308 0.00 0.00 0.00 2.57
2174 2510 6.352516 AGCCCTAGAGTAACAAGATTTGATG 58.647 40.000 0.00 0.00 0.00 3.07
2175 2511 5.008118 GCCCTAGAGTAACAAGATTTGATGC 59.992 44.000 0.00 0.00 0.00 3.91
2176 2512 6.115446 CCCTAGAGTAACAAGATTTGATGCA 58.885 40.000 0.00 0.00 0.00 3.96
2177 2513 6.599244 CCCTAGAGTAACAAGATTTGATGCAA 59.401 38.462 0.00 0.00 0.00 4.08
2178 2514 7.414540 CCCTAGAGTAACAAGATTTGATGCAAC 60.415 40.741 0.00 0.00 0.00 4.17
2179 2515 6.882610 AGAGTAACAAGATTTGATGCAACA 57.117 33.333 0.00 0.00 0.00 3.33
2180 2516 7.275888 AGAGTAACAAGATTTGATGCAACAA 57.724 32.000 5.14 5.14 0.00 2.83
2181 2517 7.141363 AGAGTAACAAGATTTGATGCAACAAC 58.859 34.615 9.14 0.00 0.00 3.32
2182 2518 5.914635 AGTAACAAGATTTGATGCAACAACG 59.085 36.000 9.14 0.00 0.00 4.10
2183 2519 3.641648 ACAAGATTTGATGCAACAACGG 58.358 40.909 9.14 0.55 0.00 4.44
2184 2520 2.352503 AGATTTGATGCAACAACGGC 57.647 45.000 9.14 2.09 0.00 5.68
2185 2521 0.984109 GATTTGATGCAACAACGGCG 59.016 50.000 9.14 4.80 0.00 6.46
2186 2522 0.388391 ATTTGATGCAACAACGGCGG 60.388 50.000 13.24 0.00 0.00 6.13
2187 2523 3.550339 TTGATGCAACAACGGCGGC 62.550 57.895 13.24 4.77 0.00 6.53
2188 2524 3.737172 GATGCAACAACGGCGGCT 61.737 61.111 13.24 0.00 0.00 5.52
2189 2525 3.267597 GATGCAACAACGGCGGCTT 62.268 57.895 13.24 2.14 0.00 4.35
2190 2526 3.267597 ATGCAACAACGGCGGCTTC 62.268 57.895 13.24 0.00 0.00 3.86
2191 2527 3.959975 GCAACAACGGCGGCTTCA 61.960 61.111 13.24 0.00 0.00 3.02
2192 2528 2.252260 CAACAACGGCGGCTTCAG 59.748 61.111 13.24 0.00 0.00 3.02
2193 2529 2.978010 AACAACGGCGGCTTCAGG 60.978 61.111 13.24 0.00 0.00 3.86
2194 2530 3.469863 AACAACGGCGGCTTCAGGA 62.470 57.895 13.24 0.00 0.00 3.86
2195 2531 2.436646 CAACGGCGGCTTCAGGAT 60.437 61.111 13.24 0.00 0.00 3.24
2196 2532 1.153449 CAACGGCGGCTTCAGGATA 60.153 57.895 13.24 0.00 0.00 2.59
2197 2533 1.153429 AACGGCGGCTTCAGGATAC 60.153 57.895 13.24 0.00 0.00 2.24
2211 2547 2.711978 GGATACTGGTTCTTGGGGAC 57.288 55.000 0.00 0.00 0.00 4.46
2225 2561 3.754766 GGGACCCGTACATGAAGAC 57.245 57.895 0.00 0.00 0.00 3.01
2226 2562 0.177373 GGGACCCGTACATGAAGACC 59.823 60.000 0.00 0.00 0.00 3.85
2227 2563 1.192428 GGACCCGTACATGAAGACCT 58.808 55.000 0.00 0.00 0.00 3.85
2228 2564 1.136500 GGACCCGTACATGAAGACCTC 59.864 57.143 0.00 0.00 0.00 3.85
2229 2565 2.100989 GACCCGTACATGAAGACCTCT 58.899 52.381 0.00 0.00 0.00 3.69
2230 2566 2.099427 GACCCGTACATGAAGACCTCTC 59.901 54.545 0.00 0.00 0.00 3.20
2231 2567 2.100197 CCCGTACATGAAGACCTCTCA 58.900 52.381 0.00 0.00 0.00 3.27
2232 2568 2.099921 CCCGTACATGAAGACCTCTCAG 59.900 54.545 0.00 0.00 0.00 3.35
2233 2569 2.480416 CCGTACATGAAGACCTCTCAGC 60.480 54.545 0.00 0.00 0.00 4.26
2234 2570 2.425312 CGTACATGAAGACCTCTCAGCT 59.575 50.000 0.00 0.00 0.00 4.24
2235 2571 3.733380 CGTACATGAAGACCTCTCAGCTG 60.733 52.174 7.63 7.63 0.00 4.24
2236 2572 2.255406 ACATGAAGACCTCTCAGCTGT 58.745 47.619 14.67 0.00 0.00 4.40
2237 2573 2.233431 ACATGAAGACCTCTCAGCTGTC 59.767 50.000 14.67 3.12 0.00 3.51
2238 2574 2.001076 TGAAGACCTCTCAGCTGTCA 57.999 50.000 14.67 4.36 0.00 3.58
2239 2575 2.533916 TGAAGACCTCTCAGCTGTCAT 58.466 47.619 14.67 0.00 0.00 3.06
2240 2576 2.495270 TGAAGACCTCTCAGCTGTCATC 59.505 50.000 14.67 6.58 0.00 2.92
2241 2577 2.228545 AGACCTCTCAGCTGTCATCA 57.771 50.000 14.67 0.00 0.00 3.07
2242 2578 2.533916 AGACCTCTCAGCTGTCATCAA 58.466 47.619 14.67 0.00 0.00 2.57
2243 2579 2.233431 AGACCTCTCAGCTGTCATCAAC 59.767 50.000 14.67 1.83 0.00 3.18
2244 2580 1.973515 ACCTCTCAGCTGTCATCAACA 59.026 47.619 14.67 0.00 36.18 3.33
2245 2581 2.369860 ACCTCTCAGCTGTCATCAACAA 59.630 45.455 14.67 0.00 37.45 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.604686 TCCAGCCGCTCTGACCTT 60.605 61.111 4.63 0.00 45.72 3.50
18 19 3.073735 CTCCAGCCGCTCTGACCT 61.074 66.667 4.63 0.00 45.72 3.85
21 22 4.074526 GCACTCCAGCCGCTCTGA 62.075 66.667 4.63 0.00 45.72 3.27
65 66 2.642807 CTCCAAAACCCTAACCTCCTGA 59.357 50.000 0.00 0.00 0.00 3.86
67 68 2.999928 TCTCCAAAACCCTAACCTCCT 58.000 47.619 0.00 0.00 0.00 3.69
70 71 4.263374 GCTACTTCTCCAAAACCCTAACCT 60.263 45.833 0.00 0.00 0.00 3.50
71 72 4.008330 GCTACTTCTCCAAAACCCTAACC 58.992 47.826 0.00 0.00 0.00 2.85
72 73 3.683340 CGCTACTTCTCCAAAACCCTAAC 59.317 47.826 0.00 0.00 0.00 2.34
73 74 3.307199 CCGCTACTTCTCCAAAACCCTAA 60.307 47.826 0.00 0.00 0.00 2.69
74 75 2.235402 CCGCTACTTCTCCAAAACCCTA 59.765 50.000 0.00 0.00 0.00 3.53
75 76 1.003233 CCGCTACTTCTCCAAAACCCT 59.997 52.381 0.00 0.00 0.00 4.34
76 77 1.271217 ACCGCTACTTCTCCAAAACCC 60.271 52.381 0.00 0.00 0.00 4.11
77 78 1.804748 CACCGCTACTTCTCCAAAACC 59.195 52.381 0.00 0.00 0.00 3.27
78 79 1.197036 GCACCGCTACTTCTCCAAAAC 59.803 52.381 0.00 0.00 0.00 2.43
79 80 1.202710 TGCACCGCTACTTCTCCAAAA 60.203 47.619 0.00 0.00 0.00 2.44
80 81 0.394938 TGCACCGCTACTTCTCCAAA 59.605 50.000 0.00 0.00 0.00 3.28
81 82 0.037326 CTGCACCGCTACTTCTCCAA 60.037 55.000 0.00 0.00 0.00 3.53
82 83 1.591703 CTGCACCGCTACTTCTCCA 59.408 57.895 0.00 0.00 0.00 3.86
83 84 1.811679 GCTGCACCGCTACTTCTCC 60.812 63.158 0.00 0.00 0.00 3.71
84 85 0.456221 TAGCTGCACCGCTACTTCTC 59.544 55.000 1.02 0.00 41.30 2.87
85 86 0.457851 CTAGCTGCACCGCTACTTCT 59.542 55.000 1.02 0.00 41.30 2.85
86 87 0.528684 CCTAGCTGCACCGCTACTTC 60.529 60.000 1.02 0.00 41.30 3.01
87 88 1.517832 CCTAGCTGCACCGCTACTT 59.482 57.895 1.02 0.00 41.30 2.24
93 94 1.144057 CCTAACCCTAGCTGCACCG 59.856 63.158 1.02 0.00 0.00 4.94
121 122 4.778143 GCGTTGCCTCCATCCCGT 62.778 66.667 0.00 0.00 0.00 5.28
161 162 2.105930 GCTAGCCTCTCTGCCACG 59.894 66.667 2.29 0.00 0.00 4.94
162 163 2.105930 CGCTAGCCTCTCTGCCAC 59.894 66.667 9.66 0.00 0.00 5.01
163 164 2.043953 TCGCTAGCCTCTCTGCCA 60.044 61.111 9.66 0.00 0.00 4.92
169 238 2.636412 TTGTGCGTCGCTAGCCTCT 61.636 57.895 19.50 0.00 0.00 3.69
174 243 0.450583 TCCTAGTTGTGCGTCGCTAG 59.549 55.000 19.50 10.79 0.00 3.42
184 253 1.258445 CGCTCCCACCTCCTAGTTGT 61.258 60.000 0.00 0.00 0.00 3.32
186 255 0.684805 CTCGCTCCCACCTCCTAGTT 60.685 60.000 0.00 0.00 0.00 2.24
187 256 1.076632 CTCGCTCCCACCTCCTAGT 60.077 63.158 0.00 0.00 0.00 2.57
188 257 1.830408 CCTCGCTCCCACCTCCTAG 60.830 68.421 0.00 0.00 0.00 3.02
203 272 4.785453 CCTTCCCACCGCTGCCTC 62.785 72.222 0.00 0.00 0.00 4.70
205 274 4.115199 ATCCTTCCCACCGCTGCC 62.115 66.667 0.00 0.00 0.00 4.85
206 275 2.514824 GATCCTTCCCACCGCTGC 60.515 66.667 0.00 0.00 0.00 5.25
207 276 2.202932 CGATCCTTCCCACCGCTG 60.203 66.667 0.00 0.00 0.00 5.18
208 277 4.162690 GCGATCCTTCCCACCGCT 62.163 66.667 0.00 0.00 42.24 5.52
209 278 3.969250 TTGCGATCCTTCCCACCGC 62.969 63.158 0.00 0.00 45.28 5.68
210 279 1.815421 CTTGCGATCCTTCCCACCG 60.815 63.158 0.00 0.00 0.00 4.94
211 280 1.452108 CCTTGCGATCCTTCCCACC 60.452 63.158 0.00 0.00 0.00 4.61
212 281 1.026718 CACCTTGCGATCCTTCCCAC 61.027 60.000 0.00 0.00 0.00 4.61
213 282 1.299648 CACCTTGCGATCCTTCCCA 59.700 57.895 0.00 0.00 0.00 4.37
214 283 1.452108 CCACCTTGCGATCCTTCCC 60.452 63.158 0.00 0.00 0.00 3.97
215 284 2.115291 GCCACCTTGCGATCCTTCC 61.115 63.158 0.00 0.00 0.00 3.46
216 285 3.502572 GCCACCTTGCGATCCTTC 58.497 61.111 0.00 0.00 0.00 3.46
226 295 2.298158 CTAGATCGCCACGCCACCTT 62.298 60.000 0.00 0.00 0.00 3.50
232 301 2.279517 CCACCTAGATCGCCACGC 60.280 66.667 0.00 0.00 0.00 5.34
233 302 1.360551 CTCCACCTAGATCGCCACG 59.639 63.158 0.00 0.00 0.00 4.94
243 313 1.003839 CTTTGCACGCCTCCACCTA 60.004 57.895 0.00 0.00 0.00 3.08
244 314 2.281761 CTTTGCACGCCTCCACCT 60.282 61.111 0.00 0.00 0.00 4.00
247 317 4.577677 TGCCTTTGCACGCCTCCA 62.578 61.111 0.00 0.00 44.23 3.86
248 318 3.741476 CTGCCTTTGCACGCCTCC 61.741 66.667 0.00 0.00 44.23 4.30
250 320 4.269523 TCCTGCCTTTGCACGCCT 62.270 61.111 0.00 0.00 44.23 5.52
294 378 2.124529 GCAACCCTAGCTGCTCCC 60.125 66.667 4.91 0.00 35.62 4.30
296 380 1.811679 GTCGCAACCCTAGCTGCTC 60.812 63.158 4.91 0.00 36.38 4.26
313 397 1.713297 AACTAGGACCTTCCACGTGT 58.287 50.000 15.65 0.00 39.61 4.49
315 399 2.454538 CCTAACTAGGACCTTCCACGT 58.545 52.381 0.00 0.00 46.63 4.49
318 402 2.043939 TCAGCCTAACTAGGACCTTCCA 59.956 50.000 0.00 0.00 46.63 3.53
321 405 5.716979 TGATATCAGCCTAACTAGGACCTT 58.283 41.667 0.00 0.00 46.63 3.50
325 409 7.699878 TCTACATGATATCAGCCTAACTAGGA 58.300 38.462 11.78 0.00 46.63 2.94
330 414 6.842437 TCCTCTACATGATATCAGCCTAAC 57.158 41.667 11.78 0.00 0.00 2.34
342 426 7.687837 GCACCAATTCTCTAATCCTCTACATGA 60.688 40.741 0.00 0.00 0.00 3.07
346 430 5.918608 TGCACCAATTCTCTAATCCTCTAC 58.081 41.667 0.00 0.00 0.00 2.59
351 435 4.943705 TGAGTTGCACCAATTCTCTAATCC 59.056 41.667 0.00 0.00 32.52 3.01
360 444 6.542005 TCAATATATCGTGAGTTGCACCAATT 59.458 34.615 0.00 0.00 44.85 2.32
421 507 2.307496 TGAGGACGTGGTTACCCTTA 57.693 50.000 0.00 0.00 0.00 2.69
424 510 2.484742 AATTGAGGACGTGGTTACCC 57.515 50.000 0.00 0.00 0.00 3.69
433 519 8.585881 TCTTCCTCCTTTATATAATTGAGGACG 58.414 37.037 27.32 25.70 45.89 4.79
442 528 6.099269 ACAAGCCGTCTTCCTCCTTTATATAA 59.901 38.462 0.00 0.00 0.00 0.98
447 533 1.975680 ACAAGCCGTCTTCCTCCTTTA 59.024 47.619 0.00 0.00 0.00 1.85
450 536 1.674057 CACAAGCCGTCTTCCTCCT 59.326 57.895 0.00 0.00 0.00 3.69
452 538 0.606604 TACCACAAGCCGTCTTCCTC 59.393 55.000 0.00 0.00 0.00 3.71
457 543 2.335316 TTTTGTACCACAAGCCGTCT 57.665 45.000 0.00 0.00 39.53 4.18
495 581 4.042435 AGACAAATTTAGGAACGGAGGGAA 59.958 41.667 0.00 0.00 0.00 3.97
496 582 3.585732 AGACAAATTTAGGAACGGAGGGA 59.414 43.478 0.00 0.00 0.00 4.20
497 583 3.951663 AGACAAATTTAGGAACGGAGGG 58.048 45.455 0.00 0.00 0.00 4.30
498 584 5.705905 AGAAAGACAAATTTAGGAACGGAGG 59.294 40.000 0.00 0.00 0.00 4.30
499 585 6.803154 AGAAAGACAAATTTAGGAACGGAG 57.197 37.500 0.00 0.00 0.00 4.63
500 586 7.673180 TCTAGAAAGACAAATTTAGGAACGGA 58.327 34.615 0.00 0.00 0.00 4.69
501 587 7.900782 TCTAGAAAGACAAATTTAGGAACGG 57.099 36.000 0.00 0.00 0.00 4.44
516 602 9.466497 AATAGCCATTTGAAATGTCTAGAAAGA 57.534 29.630 15.93 0.00 0.00 2.52
519 605 9.679661 TGTAATAGCCATTTGAAATGTCTAGAA 57.320 29.630 15.93 3.65 0.00 2.10
520 606 9.851686 ATGTAATAGCCATTTGAAATGTCTAGA 57.148 29.630 15.93 3.77 0.00 2.43
521 607 9.888878 CATGTAATAGCCATTTGAAATGTCTAG 57.111 33.333 15.93 2.82 0.00 2.43
522 608 8.352201 GCATGTAATAGCCATTTGAAATGTCTA 58.648 33.333 15.93 13.26 0.00 2.59
523 609 7.205297 GCATGTAATAGCCATTTGAAATGTCT 58.795 34.615 15.93 11.47 0.00 3.41
524 610 6.142798 CGCATGTAATAGCCATTTGAAATGTC 59.857 38.462 15.93 3.96 0.00 3.06
525 611 5.978919 CGCATGTAATAGCCATTTGAAATGT 59.021 36.000 15.93 2.12 0.00 2.71
526 612 5.403166 CCGCATGTAATAGCCATTTGAAATG 59.597 40.000 10.84 10.84 0.00 2.32
527 613 5.301551 TCCGCATGTAATAGCCATTTGAAAT 59.698 36.000 0.00 0.00 0.00 2.17
528 614 4.642437 TCCGCATGTAATAGCCATTTGAAA 59.358 37.500 0.00 0.00 0.00 2.69
529 615 4.203226 TCCGCATGTAATAGCCATTTGAA 58.797 39.130 0.00 0.00 0.00 2.69
530 616 3.814625 TCCGCATGTAATAGCCATTTGA 58.185 40.909 0.00 0.00 0.00 2.69
531 617 4.478699 CATCCGCATGTAATAGCCATTTG 58.521 43.478 0.00 0.00 0.00 2.32
532 618 3.057315 GCATCCGCATGTAATAGCCATTT 60.057 43.478 0.00 0.00 38.36 2.32
533 619 2.489329 GCATCCGCATGTAATAGCCATT 59.511 45.455 0.00 0.00 38.36 3.16
534 620 2.086869 GCATCCGCATGTAATAGCCAT 58.913 47.619 0.00 0.00 38.36 4.40
535 621 1.202746 TGCATCCGCATGTAATAGCCA 60.203 47.619 0.00 0.00 45.36 4.75
536 622 1.522668 TGCATCCGCATGTAATAGCC 58.477 50.000 0.00 0.00 45.36 3.93
547 633 5.362556 AAAATATGTCTACATGCATCCGC 57.637 39.130 0.00 0.00 37.15 5.54
548 634 8.559536 ACTTTAAAATATGTCTACATGCATCCG 58.440 33.333 0.00 0.00 37.15 4.18
571 657 8.562892 CGGAGCAAAATGAATGAATCTATACTT 58.437 33.333 0.00 0.00 0.00 2.24
572 658 7.716998 ACGGAGCAAAATGAATGAATCTATACT 59.283 33.333 0.00 0.00 0.00 2.12
573 659 7.865707 ACGGAGCAAAATGAATGAATCTATAC 58.134 34.615 0.00 0.00 0.00 1.47
574 660 9.725019 ATACGGAGCAAAATGAATGAATCTATA 57.275 29.630 0.00 0.00 0.00 1.31
575 661 6.949352 ACGGAGCAAAATGAATGAATCTAT 57.051 33.333 0.00 0.00 0.00 1.98
576 662 7.498900 ACATACGGAGCAAAATGAATGAATCTA 59.501 33.333 0.00 0.00 0.00 1.98
577 663 6.319658 ACATACGGAGCAAAATGAATGAATCT 59.680 34.615 0.00 0.00 0.00 2.40
578 664 6.498304 ACATACGGAGCAAAATGAATGAATC 58.502 36.000 0.00 0.00 0.00 2.52
579 665 6.455360 ACATACGGAGCAAAATGAATGAAT 57.545 33.333 0.00 0.00 0.00 2.57
580 666 5.895636 ACATACGGAGCAAAATGAATGAA 57.104 34.783 0.00 0.00 0.00 2.57
581 667 6.112734 ACTACATACGGAGCAAAATGAATGA 58.887 36.000 0.00 0.00 0.00 2.57
582 668 6.363577 ACTACATACGGAGCAAAATGAATG 57.636 37.500 0.00 0.00 0.00 2.67
583 669 8.677148 ATAACTACATACGGAGCAAAATGAAT 57.323 30.769 0.00 0.00 0.00 2.57
584 670 8.500753 AATAACTACATACGGAGCAAAATGAA 57.499 30.769 0.00 0.00 0.00 2.57
585 671 8.394877 CAAATAACTACATACGGAGCAAAATGA 58.605 33.333 0.00 0.00 0.00 2.57
586 672 8.181573 ACAAATAACTACATACGGAGCAAAATG 58.818 33.333 0.00 0.00 0.00 2.32
587 673 8.276252 ACAAATAACTACATACGGAGCAAAAT 57.724 30.769 0.00 0.00 0.00 1.82
588 674 7.675962 ACAAATAACTACATACGGAGCAAAA 57.324 32.000 0.00 0.00 0.00 2.44
589 675 7.388224 TCAACAAATAACTACATACGGAGCAAA 59.612 33.333 0.00 0.00 0.00 3.68
590 676 6.874664 TCAACAAATAACTACATACGGAGCAA 59.125 34.615 0.00 0.00 0.00 3.91
591 677 6.399743 TCAACAAATAACTACATACGGAGCA 58.600 36.000 0.00 0.00 0.00 4.26
592 678 6.897259 TCAACAAATAACTACATACGGAGC 57.103 37.500 0.00 0.00 0.00 4.70
593 679 9.702726 CATTTCAACAAATAACTACATACGGAG 57.297 33.333 0.00 0.00 30.51 4.63
594 680 8.178964 GCATTTCAACAAATAACTACATACGGA 58.821 33.333 0.00 0.00 30.51 4.69
595 681 7.431084 GGCATTTCAACAAATAACTACATACGG 59.569 37.037 0.00 0.00 30.51 4.02
596 682 8.181573 AGGCATTTCAACAAATAACTACATACG 58.818 33.333 0.00 0.00 30.51 3.06
599 685 9.461312 TCTAGGCATTTCAACAAATAACTACAT 57.539 29.630 0.00 0.00 30.51 2.29
600 686 8.856153 TCTAGGCATTTCAACAAATAACTACA 57.144 30.769 0.00 0.00 30.51 2.74
603 689 9.077885 TCTTTCTAGGCATTTCAACAAATAACT 57.922 29.630 0.00 0.00 30.51 2.24
604 690 9.860898 ATCTTTCTAGGCATTTCAACAAATAAC 57.139 29.630 0.00 0.00 30.51 1.89
608 694 9.077885 ACTTATCTTTCTAGGCATTTCAACAAA 57.922 29.630 0.00 0.00 0.00 2.83
609 695 8.635765 ACTTATCTTTCTAGGCATTTCAACAA 57.364 30.769 0.00 0.00 0.00 2.83
610 696 9.905713 ATACTTATCTTTCTAGGCATTTCAACA 57.094 29.630 0.00 0.00 0.00 3.33
615 701 9.136323 CCCAAATACTTATCTTTCTAGGCATTT 57.864 33.333 0.00 0.00 0.00 2.32
616 702 8.502738 TCCCAAATACTTATCTTTCTAGGCATT 58.497 33.333 0.00 0.00 0.00 3.56
617 703 8.045720 TCCCAAATACTTATCTTTCTAGGCAT 57.954 34.615 0.00 0.00 0.00 4.40
618 704 7.446106 TCCCAAATACTTATCTTTCTAGGCA 57.554 36.000 0.00 0.00 0.00 4.75
629 715 9.734984 CCGTTCCTAAATATCCCAAATACTTAT 57.265 33.333 0.00 0.00 0.00 1.73
630 716 8.936787 TCCGTTCCTAAATATCCCAAATACTTA 58.063 33.333 0.00 0.00 0.00 2.24
631 717 7.808218 TCCGTTCCTAAATATCCCAAATACTT 58.192 34.615 0.00 0.00 0.00 2.24
632 718 7.383156 TCCGTTCCTAAATATCCCAAATACT 57.617 36.000 0.00 0.00 0.00 2.12
633 719 6.653740 CCTCCGTTCCTAAATATCCCAAATAC 59.346 42.308 0.00 0.00 0.00 1.89
634 720 6.240060 CCCTCCGTTCCTAAATATCCCAAATA 60.240 42.308 0.00 0.00 0.00 1.40
635 721 5.457633 CCCTCCGTTCCTAAATATCCCAAAT 60.458 44.000 0.00 0.00 0.00 2.32
636 722 4.141344 CCCTCCGTTCCTAAATATCCCAAA 60.141 45.833 0.00 0.00 0.00 3.28
637 723 3.393278 CCCTCCGTTCCTAAATATCCCAA 59.607 47.826 0.00 0.00 0.00 4.12
638 724 2.976882 CCCTCCGTTCCTAAATATCCCA 59.023 50.000 0.00 0.00 0.00 4.37
639 725 3.245441 TCCCTCCGTTCCTAAATATCCC 58.755 50.000 0.00 0.00 0.00 3.85
640 726 3.902467 ACTCCCTCCGTTCCTAAATATCC 59.098 47.826 0.00 0.00 0.00 2.59
641 727 5.537674 TGTACTCCCTCCGTTCCTAAATATC 59.462 44.000 0.00 0.00 0.00 1.63
642 728 5.461327 TGTACTCCCTCCGTTCCTAAATAT 58.539 41.667 0.00 0.00 0.00 1.28
643 729 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
644 730 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
645 731 3.173953 TGTACTCCCTCCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
646 732 2.905415 TGTACTCCCTCCGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
647 733 4.353191 AGATATGTACTCCCTCCGTTCCTA 59.647 45.833 0.00 0.00 0.00 2.94
648 734 3.140519 AGATATGTACTCCCTCCGTTCCT 59.859 47.826 0.00 0.00 0.00 3.36
649 735 3.498334 AGATATGTACTCCCTCCGTTCC 58.502 50.000 0.00 0.00 0.00 3.62
650 736 4.142790 TGAGATATGTACTCCCTCCGTTC 58.857 47.826 0.00 0.00 33.95 3.95
651 737 4.180377 TGAGATATGTACTCCCTCCGTT 57.820 45.455 0.00 0.00 33.95 4.44
652 738 3.878237 TGAGATATGTACTCCCTCCGT 57.122 47.619 0.00 0.00 33.95 4.69
653 739 3.889538 TGTTGAGATATGTACTCCCTCCG 59.110 47.826 0.00 0.00 33.95 4.63
654 740 5.871396 TTGTTGAGATATGTACTCCCTCC 57.129 43.478 0.00 0.00 33.95 4.30
655 741 7.873505 GGTTATTGTTGAGATATGTACTCCCTC 59.126 40.741 0.00 0.00 33.95 4.30
656 742 7.347222 TGGTTATTGTTGAGATATGTACTCCCT 59.653 37.037 0.00 0.00 33.95 4.20
657 743 7.441458 GTGGTTATTGTTGAGATATGTACTCCC 59.559 40.741 0.00 0.00 33.95 4.30
658 744 8.204836 AGTGGTTATTGTTGAGATATGTACTCC 58.795 37.037 0.00 0.00 33.95 3.85
659 745 9.035607 CAGTGGTTATTGTTGAGATATGTACTC 57.964 37.037 0.00 0.00 35.26 2.59
660 746 7.495934 GCAGTGGTTATTGTTGAGATATGTACT 59.504 37.037 0.00 0.00 0.00 2.73
661 747 7.495934 AGCAGTGGTTATTGTTGAGATATGTAC 59.504 37.037 0.00 0.00 0.00 2.90
662 748 7.564793 AGCAGTGGTTATTGTTGAGATATGTA 58.435 34.615 0.00 0.00 0.00 2.29
663 749 6.418101 AGCAGTGGTTATTGTTGAGATATGT 58.582 36.000 0.00 0.00 0.00 2.29
664 750 6.017605 GGAGCAGTGGTTATTGTTGAGATATG 60.018 42.308 0.00 0.00 0.00 1.78
665 751 6.058183 GGAGCAGTGGTTATTGTTGAGATAT 58.942 40.000 0.00 0.00 0.00 1.63
666 752 5.045942 TGGAGCAGTGGTTATTGTTGAGATA 60.046 40.000 0.00 0.00 0.00 1.98
667 753 4.263462 TGGAGCAGTGGTTATTGTTGAGAT 60.263 41.667 0.00 0.00 0.00 2.75
668 754 3.072330 TGGAGCAGTGGTTATTGTTGAGA 59.928 43.478 0.00 0.00 0.00 3.27
669 755 3.411446 TGGAGCAGTGGTTATTGTTGAG 58.589 45.455 0.00 0.00 0.00 3.02
670 756 3.500448 TGGAGCAGTGGTTATTGTTGA 57.500 42.857 0.00 0.00 0.00 3.18
671 757 3.129287 GGATGGAGCAGTGGTTATTGTTG 59.871 47.826 0.00 0.00 0.00 3.33
672 758 3.245229 TGGATGGAGCAGTGGTTATTGTT 60.245 43.478 0.00 0.00 0.00 2.83
673 759 2.308570 TGGATGGAGCAGTGGTTATTGT 59.691 45.455 0.00 0.00 0.00 2.71
674 760 3.003394 TGGATGGAGCAGTGGTTATTG 57.997 47.619 0.00 0.00 0.00 1.90
675 761 3.461085 AGATGGATGGAGCAGTGGTTATT 59.539 43.478 0.00 0.00 0.00 1.40
763 1050 0.038892 CAGTGGCACCTACGTACGTT 60.039 55.000 27.92 5.61 0.00 3.99
788 1075 1.771255 GGCAGGAACTAGGGATGATGT 59.229 52.381 0.00 0.00 36.02 3.06
827 1114 4.927782 GGCGTGTGGCAGTGGACA 62.928 66.667 0.00 0.00 46.16 4.02
873 1160 0.036294 GAAGAGTGGGCTTAAGCGGT 60.036 55.000 20.80 5.34 43.26 5.68
963 1254 0.997932 CTTGCTCGCAGTAGCTCTTG 59.002 55.000 0.00 0.00 43.19 3.02
997 1292 1.236616 TTGTCGTTGCAGCCCATCTG 61.237 55.000 0.00 0.00 45.62 2.90
1009 1304 3.276846 GCACCCGCACTTGTCGTT 61.277 61.111 0.00 0.00 38.36 3.85
1234 1529 2.413351 CATCGATCAGGCGGTCGT 59.587 61.111 10.74 0.00 38.85 4.34
1285 1580 5.381757 AGCTAGCTCTACTACTAGTGCATT 58.618 41.667 12.68 0.00 40.53 3.56
1360 1655 0.799534 AGGTAATACACACGACGCGC 60.800 55.000 5.73 0.00 0.00 6.86
1363 1658 2.423185 TGGGTAGGTAATACACACGACG 59.577 50.000 0.00 0.00 43.03 5.12
1419 1715 6.787085 AGGAACGAAGAAAATAACTCACAG 57.213 37.500 0.00 0.00 0.00 3.66
1437 1733 7.474398 AAAGACTTCAAGTACGTTTAGGAAC 57.526 36.000 0.00 0.00 0.00 3.62
1446 1742 4.035208 ACAAGCCAAAAGACTTCAAGTACG 59.965 41.667 0.00 0.00 0.00 3.67
1690 1989 1.112113 TCCCTCATTCGCTGTAGTCC 58.888 55.000 0.00 0.00 0.00 3.85
1726 2026 2.108157 ACAACAAGCGCACTCCGA 59.892 55.556 11.47 0.00 40.02 4.55
1729 2029 1.128692 GGTATCACAACAAGCGCACTC 59.871 52.381 11.47 0.00 0.00 3.51
1753 2075 1.592223 GCTTACGGTCCTGCTCAGT 59.408 57.895 0.00 0.00 0.00 3.41
1766 2088 4.082949 GGTTTATGGTCTTGTGTGGCTTAC 60.083 45.833 0.00 0.00 0.00 2.34
1880 2215 2.756283 CGGGTTCCTCTCCTCGCT 60.756 66.667 0.00 0.00 0.00 4.93
1925 2261 7.417612 CCCCATCTATGAAATTAGAAACAACG 58.582 38.462 0.00 0.00 32.20 4.10
1929 2265 6.547510 AGTGCCCCATCTATGAAATTAGAAAC 59.452 38.462 0.00 0.00 32.20 2.78
1930 2266 6.672593 AGTGCCCCATCTATGAAATTAGAAA 58.327 36.000 0.00 0.00 32.20 2.52
1931 2267 6.266131 AGTGCCCCATCTATGAAATTAGAA 57.734 37.500 0.00 0.00 32.20 2.10
1932 2268 5.912149 AGTGCCCCATCTATGAAATTAGA 57.088 39.130 0.00 0.00 32.94 2.10
1933 2269 6.656693 CCTAAGTGCCCCATCTATGAAATTAG 59.343 42.308 0.00 0.00 0.00 1.73
1934 2270 6.102615 ACCTAAGTGCCCCATCTATGAAATTA 59.897 38.462 0.00 0.00 0.00 1.40
1935 2271 5.103515 ACCTAAGTGCCCCATCTATGAAATT 60.104 40.000 0.00 0.00 0.00 1.82
1936 2272 4.416848 ACCTAAGTGCCCCATCTATGAAAT 59.583 41.667 0.00 0.00 0.00 2.17
1937 2273 3.785887 ACCTAAGTGCCCCATCTATGAAA 59.214 43.478 0.00 0.00 0.00 2.69
1938 2274 3.136443 CACCTAAGTGCCCCATCTATGAA 59.864 47.826 0.00 0.00 37.14 2.57
1948 2284 1.453928 GCCATCCACCTAAGTGCCC 60.454 63.158 0.00 0.00 43.09 5.36
1949 2285 1.819632 CGCCATCCACCTAAGTGCC 60.820 63.158 0.00 0.00 43.09 5.01
1950 2286 1.090052 GTCGCCATCCACCTAAGTGC 61.090 60.000 0.00 0.00 43.09 4.40
1953 2289 1.883084 GCGTCGCCATCCACCTAAG 60.883 63.158 5.75 0.00 0.00 2.18
1955 2291 2.292794 GAAGCGTCGCCATCCACCTA 62.293 60.000 14.86 0.00 0.00 3.08
1959 2295 0.464036 ATAAGAAGCGTCGCCATCCA 59.536 50.000 14.86 4.47 0.00 3.41
1969 2305 4.749245 ACACAAACTGGAATAAGAAGCG 57.251 40.909 0.00 0.00 0.00 4.68
1974 2310 6.507023 AGCTCAAAACACAAACTGGAATAAG 58.493 36.000 0.00 0.00 0.00 1.73
1981 2317 3.611517 CTCGAGCTCAAAACACAAACTG 58.388 45.455 15.40 0.00 0.00 3.16
1996 2332 3.923827 GAGAAAAATCAGAGCTCGAGC 57.076 47.619 30.01 30.01 42.49 5.03
2005 2341 5.576337 TGAACGAACTCGAGAAAAATCAG 57.424 39.130 21.68 3.88 43.02 2.90
2007 2343 5.120208 TCCATGAACGAACTCGAGAAAAATC 59.880 40.000 21.68 11.79 43.02 2.17
2010 2346 3.739300 GTCCATGAACGAACTCGAGAAAA 59.261 43.478 21.68 0.00 43.02 2.29
2022 2358 1.647213 CGTCAAGTACGTCCATGAACG 59.353 52.381 1.74 1.74 46.72 3.95
2033 2369 1.677052 CTCTAGGGCTCCGTCAAGTAC 59.323 57.143 0.00 0.00 0.00 2.73
2034 2370 1.284198 ACTCTAGGGCTCCGTCAAGTA 59.716 52.381 0.00 0.00 0.00 2.24
2035 2371 0.039911 ACTCTAGGGCTCCGTCAAGT 59.960 55.000 0.00 0.00 0.00 3.16
2036 2372 1.950909 CTACTCTAGGGCTCCGTCAAG 59.049 57.143 0.00 0.00 0.00 3.02
2037 2373 1.562942 TCTACTCTAGGGCTCCGTCAA 59.437 52.381 0.00 0.00 0.00 3.18
2038 2374 1.210538 TCTACTCTAGGGCTCCGTCA 58.789 55.000 0.00 0.00 0.00 4.35
2039 2375 2.572209 ATCTACTCTAGGGCTCCGTC 57.428 55.000 0.00 0.00 0.00 4.79
2040 2376 2.811136 CGAATCTACTCTAGGGCTCCGT 60.811 54.545 0.00 0.00 0.00 4.69
2041 2377 1.807742 CGAATCTACTCTAGGGCTCCG 59.192 57.143 0.00 0.00 0.00 4.63
2042 2378 2.866351 ACGAATCTACTCTAGGGCTCC 58.134 52.381 0.00 0.00 0.00 4.70
2043 2379 4.897140 TCTACGAATCTACTCTAGGGCTC 58.103 47.826 0.00 0.00 0.00 4.70
2044 2380 4.978438 TCTACGAATCTACTCTAGGGCT 57.022 45.455 0.00 0.00 0.00 5.19
2045 2381 5.163834 CGAATCTACGAATCTACTCTAGGGC 60.164 48.000 0.00 0.00 35.09 5.19
2046 2382 5.933463 ACGAATCTACGAATCTACTCTAGGG 59.067 44.000 0.00 0.00 37.03 3.53
2047 2383 6.424509 ACACGAATCTACGAATCTACTCTAGG 59.575 42.308 0.00 0.00 37.03 3.02
2048 2384 7.410800 ACACGAATCTACGAATCTACTCTAG 57.589 40.000 0.00 0.00 37.03 2.43
2049 2385 8.140628 ACTACACGAATCTACGAATCTACTCTA 58.859 37.037 0.00 0.00 37.03 2.43
2050 2386 6.985645 ACTACACGAATCTACGAATCTACTCT 59.014 38.462 0.00 0.00 37.03 3.24
2051 2387 7.169645 AGACTACACGAATCTACGAATCTACTC 59.830 40.741 0.00 0.00 37.03 2.59
2052 2388 6.985645 AGACTACACGAATCTACGAATCTACT 59.014 38.462 0.00 0.00 37.03 2.57
2053 2389 7.176285 AGACTACACGAATCTACGAATCTAC 57.824 40.000 0.00 0.00 37.03 2.59
2054 2390 7.783090 AAGACTACACGAATCTACGAATCTA 57.217 36.000 0.00 0.00 37.03 1.98
2055 2391 6.680874 AAGACTACACGAATCTACGAATCT 57.319 37.500 0.00 0.00 37.03 2.40
2056 2392 7.737525 AAAAGACTACACGAATCTACGAATC 57.262 36.000 0.00 0.00 37.03 2.52
2057 2393 7.063074 CCAAAAAGACTACACGAATCTACGAAT 59.937 37.037 0.00 0.00 37.03 3.34
2058 2394 6.364165 CCAAAAAGACTACACGAATCTACGAA 59.636 38.462 0.00 0.00 37.03 3.85
2059 2395 5.860182 CCAAAAAGACTACACGAATCTACGA 59.140 40.000 0.00 0.00 37.03 3.43
2060 2396 5.061808 CCCAAAAAGACTACACGAATCTACG 59.938 44.000 0.00 0.00 39.31 3.51
2061 2397 5.350640 CCCCAAAAAGACTACACGAATCTAC 59.649 44.000 0.00 0.00 0.00 2.59
2062 2398 5.484715 CCCCAAAAAGACTACACGAATCTA 58.515 41.667 0.00 0.00 0.00 1.98
2063 2399 4.324267 CCCCAAAAAGACTACACGAATCT 58.676 43.478 0.00 0.00 0.00 2.40
2064 2400 3.119955 GCCCCAAAAAGACTACACGAATC 60.120 47.826 0.00 0.00 0.00 2.52
2065 2401 2.817844 GCCCCAAAAAGACTACACGAAT 59.182 45.455 0.00 0.00 0.00 3.34
2066 2402 2.223745 GCCCCAAAAAGACTACACGAA 58.776 47.619 0.00 0.00 0.00 3.85
2067 2403 1.874739 CGCCCCAAAAAGACTACACGA 60.875 52.381 0.00 0.00 0.00 4.35
2068 2404 0.515564 CGCCCCAAAAAGACTACACG 59.484 55.000 0.00 0.00 0.00 4.49
2069 2405 1.886886 TCGCCCCAAAAAGACTACAC 58.113 50.000 0.00 0.00 0.00 2.90
2070 2406 2.039216 TCATCGCCCCAAAAAGACTACA 59.961 45.455 0.00 0.00 0.00 2.74
2071 2407 2.678336 CTCATCGCCCCAAAAAGACTAC 59.322 50.000 0.00 0.00 0.00 2.73
2072 2408 2.569853 TCTCATCGCCCCAAAAAGACTA 59.430 45.455 0.00 0.00 0.00 2.59
2073 2409 1.351017 TCTCATCGCCCCAAAAAGACT 59.649 47.619 0.00 0.00 0.00 3.24
2074 2410 1.821216 TCTCATCGCCCCAAAAAGAC 58.179 50.000 0.00 0.00 0.00 3.01
2075 2411 2.806945 ATCTCATCGCCCCAAAAAGA 57.193 45.000 0.00 0.00 0.00 2.52
2076 2412 3.514645 CAAATCTCATCGCCCCAAAAAG 58.485 45.455 0.00 0.00 0.00 2.27
2077 2413 2.233431 CCAAATCTCATCGCCCCAAAAA 59.767 45.455 0.00 0.00 0.00 1.94
2078 2414 1.824230 CCAAATCTCATCGCCCCAAAA 59.176 47.619 0.00 0.00 0.00 2.44
2079 2415 1.272425 ACCAAATCTCATCGCCCCAAA 60.272 47.619 0.00 0.00 0.00 3.28
2080 2416 0.331278 ACCAAATCTCATCGCCCCAA 59.669 50.000 0.00 0.00 0.00 4.12
2081 2417 0.107214 GACCAAATCTCATCGCCCCA 60.107 55.000 0.00 0.00 0.00 4.96
2082 2418 0.181350 AGACCAAATCTCATCGCCCC 59.819 55.000 0.00 0.00 28.16 5.80
2083 2419 1.943340 GAAGACCAAATCTCATCGCCC 59.057 52.381 0.00 0.00 36.27 6.13
2084 2420 2.911484 AGAAGACCAAATCTCATCGCC 58.089 47.619 0.00 0.00 36.27 5.54
2085 2421 3.935203 TCAAGAAGACCAAATCTCATCGC 59.065 43.478 0.00 0.00 36.27 4.58
2086 2422 4.033817 GCTCAAGAAGACCAAATCTCATCG 59.966 45.833 0.00 0.00 36.27 3.84
2087 2423 4.335037 GGCTCAAGAAGACCAAATCTCATC 59.665 45.833 0.00 0.00 36.27 2.92
2088 2424 4.268359 GGCTCAAGAAGACCAAATCTCAT 58.732 43.478 0.00 0.00 36.27 2.90
2089 2425 3.679389 GGCTCAAGAAGACCAAATCTCA 58.321 45.455 0.00 0.00 36.27 3.27
2098 2434 0.980423 ACTCTGGGGCTCAAGAAGAC 59.020 55.000 0.00 0.00 0.00 3.01
2099 2435 2.043115 TCTACTCTGGGGCTCAAGAAGA 59.957 50.000 0.00 0.00 0.00 2.87
2100 2436 2.461695 TCTACTCTGGGGCTCAAGAAG 58.538 52.381 0.00 0.00 0.00 2.85
2101 2437 2.623418 TCTACTCTGGGGCTCAAGAA 57.377 50.000 0.00 0.00 0.00 2.52
2102 2438 2.856760 ATCTACTCTGGGGCTCAAGA 57.143 50.000 0.00 0.00 0.00 3.02
2103 2439 3.539604 CAAATCTACTCTGGGGCTCAAG 58.460 50.000 0.00 0.00 0.00 3.02
2104 2440 2.239654 CCAAATCTACTCTGGGGCTCAA 59.760 50.000 0.00 0.00 0.00 3.02
2105 2441 1.839994 CCAAATCTACTCTGGGGCTCA 59.160 52.381 0.00 0.00 0.00 4.26
2106 2442 1.840635 ACCAAATCTACTCTGGGGCTC 59.159 52.381 0.00 0.00 34.31 4.70
2107 2443 1.840635 GACCAAATCTACTCTGGGGCT 59.159 52.381 0.00 0.00 34.31 5.19
2108 2444 1.840635 AGACCAAATCTACTCTGGGGC 59.159 52.381 0.00 0.00 35.15 5.80
2109 2445 4.576330 AAAGACCAAATCTACTCTGGGG 57.424 45.455 0.00 0.00 36.27 4.96
2110 2446 6.003950 TCAAAAAGACCAAATCTACTCTGGG 58.996 40.000 0.00 0.00 36.27 4.45
2111 2447 7.693969 ATCAAAAAGACCAAATCTACTCTGG 57.306 36.000 0.00 0.00 36.27 3.86
2112 2448 9.442047 ACTATCAAAAAGACCAAATCTACTCTG 57.558 33.333 0.00 0.00 36.27 3.35
2113 2449 9.660180 GACTATCAAAAAGACCAAATCTACTCT 57.340 33.333 0.00 0.00 36.27 3.24
2114 2450 9.660180 AGACTATCAAAAAGACCAAATCTACTC 57.340 33.333 0.00 0.00 36.27 2.59
2118 2454 9.579932 AAGAAGACTATCAAAAAGACCAAATCT 57.420 29.630 0.00 0.00 40.46 2.40
2119 2455 9.617975 CAAGAAGACTATCAAAAAGACCAAATC 57.382 33.333 0.00 0.00 0.00 2.17
2120 2456 9.354673 TCAAGAAGACTATCAAAAAGACCAAAT 57.645 29.630 0.00 0.00 0.00 2.32
2121 2457 8.621286 GTCAAGAAGACTATCAAAAAGACCAAA 58.379 33.333 0.00 0.00 44.09 3.28
2122 2458 7.042051 CGTCAAGAAGACTATCAAAAAGACCAA 60.042 37.037 0.00 0.00 45.32 3.67
2123 2459 6.423905 CGTCAAGAAGACTATCAAAAAGACCA 59.576 38.462 0.00 0.00 45.32 4.02
2124 2460 6.128526 CCGTCAAGAAGACTATCAAAAAGACC 60.129 42.308 0.00 0.00 45.32 3.85
2125 2461 6.645415 TCCGTCAAGAAGACTATCAAAAAGAC 59.355 38.462 0.00 0.00 45.32 3.01
2126 2462 6.755206 TCCGTCAAGAAGACTATCAAAAAGA 58.245 36.000 0.00 0.00 45.32 2.52
2127 2463 6.401581 GCTCCGTCAAGAAGACTATCAAAAAG 60.402 42.308 0.00 0.00 45.32 2.27
2128 2464 5.408604 GCTCCGTCAAGAAGACTATCAAAAA 59.591 40.000 0.00 0.00 45.32 1.94
2129 2465 4.929808 GCTCCGTCAAGAAGACTATCAAAA 59.070 41.667 0.00 0.00 45.32 2.44
2130 2466 4.495422 GCTCCGTCAAGAAGACTATCAAA 58.505 43.478 0.00 0.00 45.32 2.69
2131 2467 3.119101 GGCTCCGTCAAGAAGACTATCAA 60.119 47.826 0.00 0.00 45.32 2.57
2132 2468 2.427453 GGCTCCGTCAAGAAGACTATCA 59.573 50.000 0.00 0.00 45.32 2.15
2133 2469 2.223852 GGGCTCCGTCAAGAAGACTATC 60.224 54.545 0.00 0.00 45.32 2.08
2134 2470 1.757699 GGGCTCCGTCAAGAAGACTAT 59.242 52.381 0.00 0.00 45.32 2.12
2135 2471 1.183549 GGGCTCCGTCAAGAAGACTA 58.816 55.000 0.00 0.00 45.32 2.59
2136 2472 0.543174 AGGGCTCCGTCAAGAAGACT 60.543 55.000 0.00 0.00 45.32 3.24
2137 2473 1.135333 CTAGGGCTCCGTCAAGAAGAC 59.865 57.143 0.00 0.00 44.02 3.01
2138 2474 1.005569 TCTAGGGCTCCGTCAAGAAGA 59.994 52.381 0.00 0.00 0.00 2.87
2139 2475 1.407258 CTCTAGGGCTCCGTCAAGAAG 59.593 57.143 0.00 0.00 0.00 2.85
2140 2476 1.272536 ACTCTAGGGCTCCGTCAAGAA 60.273 52.381 0.00 0.00 0.00 2.52
2141 2477 0.331954 ACTCTAGGGCTCCGTCAAGA 59.668 55.000 0.00 0.00 0.00 3.02
2142 2478 2.054232 TACTCTAGGGCTCCGTCAAG 57.946 55.000 0.00 0.00 0.00 3.02
2143 2479 2.097825 GTTACTCTAGGGCTCCGTCAA 58.902 52.381 0.00 0.00 0.00 3.18
2144 2480 1.005097 TGTTACTCTAGGGCTCCGTCA 59.995 52.381 0.00 0.00 0.00 4.35
2145 2481 1.760192 TGTTACTCTAGGGCTCCGTC 58.240 55.000 0.00 0.00 0.00 4.79
2146 2482 2.100989 CTTGTTACTCTAGGGCTCCGT 58.899 52.381 0.00 0.00 0.00 4.69
2147 2483 2.376109 TCTTGTTACTCTAGGGCTCCG 58.624 52.381 0.00 0.00 0.00 4.63
2148 2484 5.104900 TCAAATCTTGTTACTCTAGGGCTCC 60.105 44.000 0.00 0.00 0.00 4.70
2149 2485 5.978814 TCAAATCTTGTTACTCTAGGGCTC 58.021 41.667 0.00 0.00 0.00 4.70
2150 2486 6.352516 CATCAAATCTTGTTACTCTAGGGCT 58.647 40.000 0.00 0.00 0.00 5.19
2151 2487 5.008118 GCATCAAATCTTGTTACTCTAGGGC 59.992 44.000 0.00 0.00 0.00 5.19
2152 2488 6.115446 TGCATCAAATCTTGTTACTCTAGGG 58.885 40.000 0.00 0.00 0.00 3.53
2153 2489 7.119699 TGTTGCATCAAATCTTGTTACTCTAGG 59.880 37.037 0.00 0.00 0.00 3.02
2154 2490 8.032952 TGTTGCATCAAATCTTGTTACTCTAG 57.967 34.615 0.00 0.00 0.00 2.43
2155 2491 7.977789 TGTTGCATCAAATCTTGTTACTCTA 57.022 32.000 0.00 0.00 0.00 2.43
2156 2492 6.882610 TGTTGCATCAAATCTTGTTACTCT 57.117 33.333 0.00 0.00 0.00 3.24
2157 2493 6.086765 CGTTGTTGCATCAAATCTTGTTACTC 59.913 38.462 11.67 0.00 0.00 2.59
2158 2494 5.914635 CGTTGTTGCATCAAATCTTGTTACT 59.085 36.000 11.67 0.00 0.00 2.24
2159 2495 5.116983 CCGTTGTTGCATCAAATCTTGTTAC 59.883 40.000 11.67 0.00 0.00 2.50
2160 2496 5.218885 CCGTTGTTGCATCAAATCTTGTTA 58.781 37.500 11.67 0.00 0.00 2.41
2161 2497 4.050553 CCGTTGTTGCATCAAATCTTGTT 58.949 39.130 11.67 0.00 0.00 2.83
2162 2498 3.641648 CCGTTGTTGCATCAAATCTTGT 58.358 40.909 11.67 0.00 0.00 3.16
2163 2499 2.409378 GCCGTTGTTGCATCAAATCTTG 59.591 45.455 11.67 1.36 0.00 3.02
2164 2500 2.676076 GCCGTTGTTGCATCAAATCTT 58.324 42.857 11.67 0.00 0.00 2.40
2165 2501 1.401409 CGCCGTTGTTGCATCAAATCT 60.401 47.619 11.67 0.00 0.00 2.40
2166 2502 0.984109 CGCCGTTGTTGCATCAAATC 59.016 50.000 11.67 0.49 0.00 2.17
2167 2503 0.388391 CCGCCGTTGTTGCATCAAAT 60.388 50.000 11.67 0.00 0.00 2.32
2168 2504 1.007964 CCGCCGTTGTTGCATCAAA 60.008 52.632 11.67 0.00 0.00 2.69
2169 2505 2.642129 CCGCCGTTGTTGCATCAA 59.358 55.556 6.10 6.10 0.00 2.57
2170 2506 4.036804 GCCGCCGTTGTTGCATCA 62.037 61.111 0.00 0.00 0.00 3.07
2171 2507 3.267597 AAGCCGCCGTTGTTGCATC 62.268 57.895 0.00 0.00 0.00 3.91
2172 2508 3.267597 GAAGCCGCCGTTGTTGCAT 62.268 57.895 0.00 0.00 0.00 3.96
2173 2509 3.959975 GAAGCCGCCGTTGTTGCA 61.960 61.111 0.00 0.00 0.00 4.08
2174 2510 3.879351 CTGAAGCCGCCGTTGTTGC 62.879 63.158 0.00 0.00 0.00 4.17
2175 2511 2.252260 CTGAAGCCGCCGTTGTTG 59.748 61.111 0.00 0.00 0.00 3.33
2176 2512 2.748058 ATCCTGAAGCCGCCGTTGTT 62.748 55.000 0.00 0.00 0.00 2.83
2177 2513 1.895020 TATCCTGAAGCCGCCGTTGT 61.895 55.000 0.00 0.00 0.00 3.32
2178 2514 1.153449 TATCCTGAAGCCGCCGTTG 60.153 57.895 0.00 0.00 0.00 4.10
2179 2515 1.153429 GTATCCTGAAGCCGCCGTT 60.153 57.895 0.00 0.00 0.00 4.44
2180 2516 2.058595 AGTATCCTGAAGCCGCCGT 61.059 57.895 0.00 0.00 0.00 5.68
2181 2517 1.592669 CAGTATCCTGAAGCCGCCG 60.593 63.158 0.00 0.00 41.50 6.46
2182 2518 1.227674 CCAGTATCCTGAAGCCGCC 60.228 63.158 0.00 0.00 41.50 6.13
2183 2519 0.107654 AACCAGTATCCTGAAGCCGC 60.108 55.000 0.00 0.00 41.50 6.53
2184 2520 1.482593 AGAACCAGTATCCTGAAGCCG 59.517 52.381 0.00 0.00 41.50 5.52
2185 2521 3.274288 CAAGAACCAGTATCCTGAAGCC 58.726 50.000 0.00 0.00 41.50 4.35
2186 2522 3.274288 CCAAGAACCAGTATCCTGAAGC 58.726 50.000 0.00 0.00 41.50 3.86
2187 2523 3.370953 CCCCAAGAACCAGTATCCTGAAG 60.371 52.174 0.00 0.00 41.50 3.02
2188 2524 2.576191 CCCCAAGAACCAGTATCCTGAA 59.424 50.000 0.00 0.00 41.50 3.02
2189 2525 2.196595 CCCCAAGAACCAGTATCCTGA 58.803 52.381 0.00 0.00 41.50 3.86
2190 2526 2.092914 GTCCCCAAGAACCAGTATCCTG 60.093 54.545 0.00 0.00 38.50 3.86
2191 2527 2.197465 GTCCCCAAGAACCAGTATCCT 58.803 52.381 0.00 0.00 0.00 3.24
2192 2528 1.212195 GGTCCCCAAGAACCAGTATCC 59.788 57.143 0.00 0.00 0.00 2.59
2193 2529 2.711978 GGTCCCCAAGAACCAGTATC 57.288 55.000 0.00 0.00 0.00 2.24
2200 2536 0.616891 ATGTACGGGTCCCCAAGAAC 59.383 55.000 1.00 0.00 35.37 3.01
2201 2537 0.616371 CATGTACGGGTCCCCAAGAA 59.384 55.000 1.00 0.00 35.37 2.52
2202 2538 0.252330 TCATGTACGGGTCCCCAAGA 60.252 55.000 1.00 0.00 35.37 3.02
2203 2539 0.616371 TTCATGTACGGGTCCCCAAG 59.384 55.000 1.00 0.00 35.37 3.61
2204 2540 0.616371 CTTCATGTACGGGTCCCCAA 59.384 55.000 1.00 0.00 35.37 4.12
2205 2541 0.252330 TCTTCATGTACGGGTCCCCA 60.252 55.000 1.00 0.00 35.37 4.96
2206 2542 0.177373 GTCTTCATGTACGGGTCCCC 59.823 60.000 1.00 0.00 0.00 4.81
2207 2543 0.177373 GGTCTTCATGTACGGGTCCC 59.823 60.000 0.00 0.00 0.00 4.46
2208 2544 1.136500 GAGGTCTTCATGTACGGGTCC 59.864 57.143 0.00 0.00 0.00 4.46
2209 2545 2.099427 GAGAGGTCTTCATGTACGGGTC 59.901 54.545 0.00 0.00 0.00 4.46
2210 2546 2.100989 GAGAGGTCTTCATGTACGGGT 58.899 52.381 0.00 0.00 0.00 5.28
2211 2547 2.099921 CTGAGAGGTCTTCATGTACGGG 59.900 54.545 0.00 0.00 0.00 5.28
2212 2548 2.480416 GCTGAGAGGTCTTCATGTACGG 60.480 54.545 0.00 0.00 0.00 4.02
2213 2549 2.425312 AGCTGAGAGGTCTTCATGTACG 59.575 50.000 0.00 0.00 0.00 3.67
2214 2550 3.194542 ACAGCTGAGAGGTCTTCATGTAC 59.805 47.826 23.35 0.00 0.00 2.90
2215 2551 3.435275 ACAGCTGAGAGGTCTTCATGTA 58.565 45.455 23.35 0.00 0.00 2.29
2216 2552 2.233431 GACAGCTGAGAGGTCTTCATGT 59.767 50.000 23.35 0.00 0.00 3.21
2217 2553 2.233186 TGACAGCTGAGAGGTCTTCATG 59.767 50.000 23.35 0.00 32.84 3.07
2218 2554 2.533916 TGACAGCTGAGAGGTCTTCAT 58.466 47.619 23.35 0.00 32.84 2.57
2219 2555 2.001076 TGACAGCTGAGAGGTCTTCA 57.999 50.000 23.35 8.08 32.84 3.02
2220 2556 2.495270 TGATGACAGCTGAGAGGTCTTC 59.505 50.000 23.35 14.38 36.68 2.87
2221 2557 2.533916 TGATGACAGCTGAGAGGTCTT 58.466 47.619 23.35 4.99 32.84 3.01
2222 2558 2.228545 TGATGACAGCTGAGAGGTCT 57.771 50.000 23.35 0.00 32.84 3.85
2223 2559 2.028658 TGTTGATGACAGCTGAGAGGTC 60.029 50.000 23.35 7.59 33.40 3.85
2224 2560 1.973515 TGTTGATGACAGCTGAGAGGT 59.026 47.619 23.35 0.00 33.40 3.85
2225 2561 2.756840 TGTTGATGACAGCTGAGAGG 57.243 50.000 23.35 0.00 33.40 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.