Multiple sequence alignment - TraesCS1A01G202200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G202200 chr1A 100.000 4830 0 0 1 4830 363427660 363422831 0.000000e+00 8920.0
1 TraesCS1A01G202200 chr1A 94.937 2054 88 6 724 2767 363693210 363695257 0.000000e+00 3203.0
2 TraesCS1A01G202200 chr1A 86.406 640 63 16 3401 4039 363695603 363696219 0.000000e+00 678.0
3 TraesCS1A01G202200 chr1A 95.368 367 13 2 2953 3318 363695241 363695604 9.010000e-162 580.0
4 TraesCS1A01G202200 chr1D 94.633 2683 111 16 34 2700 291090296 291087631 0.000000e+00 4126.0
5 TraesCS1A01G202200 chr1D 93.151 2117 126 10 668 2767 291789656 291791770 0.000000e+00 3088.0
6 TraesCS1A01G202200 chr1D 90.366 820 40 15 3401 4211 291087256 291086467 0.000000e+00 1040.0
7 TraesCS1A01G202200 chr1D 90.781 640 38 13 3401 4039 291792206 291792825 0.000000e+00 835.0
8 TraesCS1A01G202200 chr1D 85.570 596 59 15 4256 4830 291086393 291085804 2.490000e-167 599.0
9 TraesCS1A01G202200 chr1D 94.175 206 7 2 2947 3147 291791747 291791952 4.690000e-80 309.0
10 TraesCS1A01G202200 chr1D 98.235 170 3 0 3149 3318 291087424 291087255 1.020000e-76 298.0
11 TraesCS1A01G202200 chr1D 93.413 167 11 0 3152 3318 291792041 291792207 1.040000e-61 248.0
12 TraesCS1A01G202200 chr1D 87.705 122 2 7 3028 3149 291087611 291087503 3.920000e-26 130.0
13 TraesCS1A01G202200 chr1B 94.485 2049 104 6 724 2767 392729116 392731160 0.000000e+00 3149.0
14 TraesCS1A01G202200 chr1B 89.866 523 40 11 3401 3922 392731505 392732015 0.000000e+00 660.0
15 TraesCS1A01G202200 chr1B 93.566 373 20 2 2947 3318 392731137 392731506 1.960000e-153 553.0
16 TraesCS1A01G202200 chr1B 91.195 159 9 3 3570 3728 392735890 392736043 1.360000e-50 211.0
17 TraesCS1A01G202200 chr1B 94.624 93 4 1 3316 3408 133188855 133188946 5.040000e-30 143.0
18 TraesCS1A01G202200 chr5A 98.953 191 1 1 2768 2958 13889430 13889619 1.660000e-89 340.0
19 TraesCS1A01G202200 chr5A 93.878 98 4 2 3306 3402 6163313 6163217 3.900000e-31 147.0
20 TraesCS1A01G202200 chr3A 97.959 196 4 0 2761 2956 642038746 642038941 1.660000e-89 340.0
21 TraesCS1A01G202200 chr3A 92.157 51 2 2 2628 2677 252529758 252529807 2.410000e-08 71.3
22 TraesCS1A01G202200 chr5B 97.949 195 4 0 2759 2953 264932548 264932354 5.990000e-89 339.0
23 TraesCS1A01G202200 chr5B 96.482 199 6 1 2754 2952 544855911 544855714 1.300000e-85 327.0
24 TraesCS1A01G202200 chr6B 97.938 194 4 0 2757 2950 171060970 171060777 2.150000e-88 337.0
25 TraesCS1A01G202200 chr7A 97.000 200 4 2 2758 2956 105168798 105168996 7.750000e-88 335.0
26 TraesCS1A01G202200 chr2B 96.985 199 5 1 2755 2952 657198173 657197975 2.790000e-87 333.0
27 TraesCS1A01G202200 chr2B 92.825 223 11 5 2752 2974 694263446 694263229 7.800000e-83 318.0
28 TraesCS1A01G202200 chr2B 94.681 94 4 1 3313 3405 799148682 799148775 1.400000e-30 145.0
29 TraesCS1A01G202200 chr6A 96.482 199 7 0 2768 2966 127185358 127185160 3.600000e-86 329.0
30 TraesCS1A01G202200 chr6D 96.591 88 3 0 3315 3402 68334473 68334386 3.900000e-31 147.0
31 TraesCS1A01G202200 chr6D 92.079 101 6 2 3313 3412 77674396 77674495 1.810000e-29 141.0
32 TraesCS1A01G202200 chr5D 95.604 91 4 0 3313 3403 276292429 276292519 3.900000e-31 147.0
33 TraesCS1A01G202200 chr5D 95.604 91 3 1 3316 3406 496216256 496216345 1.400000e-30 145.0
34 TraesCS1A01G202200 chr4D 89.655 116 7 4 3295 3408 486767914 486768026 5.040000e-30 143.0
35 TraesCS1A01G202200 chr3B 90.385 104 8 2 3300 3402 240476621 240476723 8.430000e-28 135.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G202200 chr1A 363422831 363427660 4829 True 8920.00 8920 100.0000 1 4830 1 chr1A.!!$R1 4829
1 TraesCS1A01G202200 chr1A 363693210 363696219 3009 False 1487.00 3203 92.2370 724 4039 3 chr1A.!!$F1 3315
2 TraesCS1A01G202200 chr1D 291085804 291090296 4492 True 1238.60 4126 91.3018 34 4830 5 chr1D.!!$R1 4796
3 TraesCS1A01G202200 chr1D 291789656 291792825 3169 False 1120.00 3088 92.8800 668 4039 4 chr1D.!!$F1 3371
4 TraesCS1A01G202200 chr1B 392729116 392736043 6927 False 1143.25 3149 92.2780 724 3922 4 chr1B.!!$F2 3198

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
530 537 0.035439 TCCCCTTGCCTTCGATGTTC 60.035 55.0 0.00 0.00 0.0 3.18 F
1312 1331 1.546961 TCCCAGACGAAGGAGAACTC 58.453 55.0 0.00 0.00 0.0 3.01 F
2782 2818 0.615827 ATTTGAAGGGGAGCCTTGGC 60.616 55.0 2.97 2.97 0.0 4.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1975 1998 0.827368 CAGTAGGAGCTTGAGGACCC 59.173 60.0 0.0 0.0 0.00 4.46 R
2798 2834 0.037303 ACCTCATGGTCACAAGGCAG 59.963 55.0 0.0 0.0 44.78 4.85 R
3929 4061 0.243636 CACGCCCTCCAATTCCAAAC 59.756 55.0 0.0 0.0 0.00 2.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.961511 AAGCAGCCACGACGCGAA 62.962 61.111 15.93 0.00 0.00 4.70
54 55 2.052690 GCCTCCGTGACCTGAGCTA 61.053 63.158 0.00 0.00 0.00 3.32
64 65 2.722201 CCTGAGCTACCCACGTCCC 61.722 68.421 0.00 0.00 0.00 4.46
89 90 2.694992 ACCCCCGGGATTTCCTCC 60.695 66.667 26.32 0.00 44.11 4.30
99 100 2.034878 GGATTTCCTCCCAATTCCTGC 58.965 52.381 0.00 0.00 38.19 4.85
101 102 2.925966 TTTCCTCCCAATTCCTGCAT 57.074 45.000 0.00 0.00 0.00 3.96
102 103 4.473444 GATTTCCTCCCAATTCCTGCATA 58.527 43.478 0.00 0.00 0.00 3.14
109 116 2.091665 CCCAATTCCTGCATACCTCCTT 60.092 50.000 0.00 0.00 0.00 3.36
139 146 0.393537 GAGCACCTGTTCCCATCCAG 60.394 60.000 0.00 0.00 0.00 3.86
204 211 2.555199 GATTCTTCATCTCCACCACCG 58.445 52.381 0.00 0.00 0.00 4.94
264 271 0.323360 ATTGTTGCGGCCAGGTGTAT 60.323 50.000 2.24 0.00 0.00 2.29
348 355 3.255888 AGCTTACTCGAATGACAGTGTGA 59.744 43.478 0.00 0.00 0.00 3.58
349 356 3.987868 GCTTACTCGAATGACAGTGTGAA 59.012 43.478 0.00 0.00 0.00 3.18
350 357 4.447724 GCTTACTCGAATGACAGTGTGAAA 59.552 41.667 0.00 0.00 0.00 2.69
370 377 9.400638 TGTGAAAACGTTATTTATCATTGTTCC 57.599 29.630 0.00 0.00 0.00 3.62
393 400 5.105756 CCCGCAATTCTTTCTTCACCTATTT 60.106 40.000 0.00 0.00 0.00 1.40
394 401 6.389906 CCGCAATTCTTTCTTCACCTATTTT 58.610 36.000 0.00 0.00 0.00 1.82
395 402 7.362574 CCCGCAATTCTTTCTTCACCTATTTTA 60.363 37.037 0.00 0.00 0.00 1.52
409 416 5.949952 CACCTATTTTAGCCCTTAACCTTGT 59.050 40.000 0.00 0.00 0.00 3.16
437 444 2.219458 CTTCAGGCATGGTGCTGATAG 58.781 52.381 0.00 2.35 44.28 2.08
456 463 3.674528 AGCAATGATGGACGAGATAGG 57.325 47.619 0.00 0.00 0.00 2.57
470 477 0.912486 GATAGGGGTGAAGGTGCTGT 59.088 55.000 0.00 0.00 0.00 4.40
473 480 1.150536 GGGGTGAAGGTGCTGTTGA 59.849 57.895 0.00 0.00 0.00 3.18
474 481 0.251341 GGGGTGAAGGTGCTGTTGAT 60.251 55.000 0.00 0.00 0.00 2.57
491 498 1.616374 TGATGCTCGTCAACACAGGTA 59.384 47.619 0.00 0.00 0.00 3.08
510 517 6.891908 ACAGGTAATTCTTTCACCAATATGCT 59.108 34.615 0.00 0.00 34.62 3.79
523 530 2.363359 CAATATGCTTCCCCTTGCCTTC 59.637 50.000 0.00 0.00 0.00 3.46
530 537 0.035439 TCCCCTTGCCTTCGATGTTC 60.035 55.000 0.00 0.00 0.00 3.18
537 544 5.175859 CCTTGCCTTCGATGTTCTAGTTTA 58.824 41.667 0.00 0.00 0.00 2.01
542 549 5.062308 GCCTTCGATGTTCTAGTTTAGTGTG 59.938 44.000 0.00 0.00 0.00 3.82
543 550 6.387465 CCTTCGATGTTCTAGTTTAGTGTGA 58.613 40.000 0.00 0.00 0.00 3.58
544 551 6.528423 CCTTCGATGTTCTAGTTTAGTGTGAG 59.472 42.308 0.00 0.00 0.00 3.51
545 552 6.812879 TCGATGTTCTAGTTTAGTGTGAGA 57.187 37.500 0.00 0.00 0.00 3.27
546 553 7.210718 TCGATGTTCTAGTTTAGTGTGAGAA 57.789 36.000 0.00 0.00 0.00 2.87
547 554 7.082602 TCGATGTTCTAGTTTAGTGTGAGAAC 58.917 38.462 6.20 6.20 44.04 3.01
548 555 7.040617 TCGATGTTCTAGTTTAGTGTGAGAACT 60.041 37.037 12.72 0.00 44.08 3.01
661 668 9.693739 AGTATAACATGAAATTTGTATGTGGGA 57.306 29.630 14.88 7.37 35.39 4.37
678 687 7.995052 ATGTGGGACTGCTATATATAATGGA 57.005 36.000 0.00 0.00 0.00 3.41
701 710 8.904834 TGGATGAAGTACTATCAAAGTAGTCTC 58.095 37.037 0.00 0.00 42.46 3.36
815 830 9.581289 TCTCCTAAAATTGTTTGAAACCATCTA 57.419 29.630 5.50 0.00 0.00 1.98
850 865 7.492524 TCAGTTCTAATGATGGTAGTGATGAC 58.507 38.462 0.00 0.00 0.00 3.06
1063 1080 8.503196 TGGCATATGCTTTACAGAAATATAACG 58.497 33.333 26.12 0.00 41.70 3.18
1065 1082 9.530129 GCATATGCTTTACAGAAATATAACGAC 57.470 33.333 20.64 0.00 38.21 4.34
1073 1090 3.973135 CAGAAATATAACGACGACGAGGG 59.027 47.826 15.32 0.00 42.66 4.30
1145 1162 5.195001 TGAGCACATTCCCTTGTTTTAAC 57.805 39.130 0.00 0.00 0.00 2.01
1170 1187 7.563888 CTGAGAAATATTTTCAGGAGATGCA 57.436 36.000 20.91 0.00 35.75 3.96
1312 1331 1.546961 TCCCAGACGAAGGAGAACTC 58.453 55.000 0.00 0.00 0.00 3.01
1384 1403 6.366877 TGCTTTCTTAATTGTACGTGACTACC 59.633 38.462 0.00 0.00 0.00 3.18
1883 1904 3.129638 CGAGTAGAGTCTTGCCTTAAGCT 59.870 47.826 0.00 0.00 44.23 3.74
1922 1943 2.094545 GCAATCACCATGGTTTGAGTCC 60.095 50.000 26.58 5.83 0.00 3.85
1923 1944 3.156293 CAATCACCATGGTTTGAGTCCA 58.844 45.455 20.34 0.00 39.41 4.02
1926 1947 3.420893 TCACCATGGTTTGAGTCCATTC 58.579 45.455 16.84 0.00 42.92 2.67
1975 1998 1.517257 CTTCCGCTAGCGTCTGGTG 60.517 63.158 33.18 18.17 37.81 4.17
2141 2164 1.001641 GCCCCTCAGCATCAACAGT 60.002 57.895 0.00 0.00 0.00 3.55
2166 2189 1.005630 AGGAGCGCATCGGCTATTC 60.006 57.895 11.47 0.00 44.93 1.75
2213 2236 1.901159 TCCATTGCCAAATGTTCCAGG 59.099 47.619 0.00 0.00 41.46 4.45
2352 2375 1.205064 CCGAGCTGCAAAGAACACG 59.795 57.895 1.02 0.00 0.00 4.49
2500 2531 0.897621 GGAAAATGGGGTCTGCTTGG 59.102 55.000 0.00 0.00 0.00 3.61
2561 2597 5.306114 ACTTAGCAAAACTAACCCTGAGT 57.694 39.130 0.00 0.00 35.89 3.41
2588 2624 3.825328 AGCCTTAGCGAAATCATCCAAT 58.175 40.909 0.00 0.00 46.67 3.16
2703 2739 2.166829 TGTCAAGAGGAGCAGAGAGAC 58.833 52.381 0.00 0.00 0.00 3.36
2708 2744 3.844090 GGAGCAGAGAGACGGCCC 61.844 72.222 0.00 0.00 40.39 5.80
2722 2758 1.143073 ACGGCCCCTCCTAAAATGATC 59.857 52.381 0.00 0.00 0.00 2.92
2725 2761 3.751893 CGGCCCCTCCTAAAATGATCATT 60.752 47.826 15.36 15.36 0.00 2.57
2766 2802 8.050778 TCTTTATTCGTTGGAAGCATGTATTT 57.949 30.769 0.00 0.00 35.19 1.40
2767 2803 7.967854 TCTTTATTCGTTGGAAGCATGTATTTG 59.032 33.333 0.00 0.00 35.19 2.32
2768 2804 5.895636 ATTCGTTGGAAGCATGTATTTGA 57.104 34.783 0.00 0.00 35.19 2.69
2769 2805 5.697473 TTCGTTGGAAGCATGTATTTGAA 57.303 34.783 0.00 0.00 0.00 2.69
2770 2806 5.295431 TCGTTGGAAGCATGTATTTGAAG 57.705 39.130 0.00 0.00 0.00 3.02
2771 2807 4.155826 TCGTTGGAAGCATGTATTTGAAGG 59.844 41.667 0.00 0.00 0.00 3.46
2772 2808 4.675146 CGTTGGAAGCATGTATTTGAAGGG 60.675 45.833 0.00 0.00 0.00 3.95
2773 2809 3.364549 TGGAAGCATGTATTTGAAGGGG 58.635 45.455 0.00 0.00 0.00 4.79
2774 2810 3.011144 TGGAAGCATGTATTTGAAGGGGA 59.989 43.478 0.00 0.00 0.00 4.81
2775 2811 3.633986 GGAAGCATGTATTTGAAGGGGAG 59.366 47.826 0.00 0.00 0.00 4.30
2776 2812 2.659428 AGCATGTATTTGAAGGGGAGC 58.341 47.619 0.00 0.00 0.00 4.70
2777 2813 1.683385 GCATGTATTTGAAGGGGAGCC 59.317 52.381 0.00 0.00 0.00 4.70
2778 2814 2.687914 GCATGTATTTGAAGGGGAGCCT 60.688 50.000 0.00 0.00 0.00 4.58
2779 2815 3.635591 CATGTATTTGAAGGGGAGCCTT 58.364 45.455 0.00 0.00 0.00 4.35
2780 2816 3.085952 TGTATTTGAAGGGGAGCCTTG 57.914 47.619 0.00 0.00 0.00 3.61
2781 2817 2.291540 TGTATTTGAAGGGGAGCCTTGG 60.292 50.000 0.00 0.00 0.00 3.61
2782 2818 0.615827 ATTTGAAGGGGAGCCTTGGC 60.616 55.000 2.97 2.97 0.00 4.52
2783 2819 3.567579 TTGAAGGGGAGCCTTGGCG 62.568 63.158 5.95 0.00 0.00 5.69
2791 2827 3.605749 GAGCCTTGGCGCAGTGGTA 62.606 63.158 10.83 0.00 0.00 3.25
2792 2828 2.671619 GCCTTGGCGCAGTGGTAA 60.672 61.111 10.83 0.00 0.00 2.85
2793 2829 2.265182 GCCTTGGCGCAGTGGTAAA 61.265 57.895 10.83 0.00 0.00 2.01
2794 2830 1.875963 CCTTGGCGCAGTGGTAAAG 59.124 57.895 10.83 0.71 0.00 1.85
2795 2831 1.210155 CTTGGCGCAGTGGTAAAGC 59.790 57.895 10.83 0.00 0.00 3.51
2796 2832 1.228124 TTGGCGCAGTGGTAAAGCT 60.228 52.632 10.83 0.00 0.00 3.74
2797 2833 1.514678 TTGGCGCAGTGGTAAAGCTG 61.515 55.000 10.83 0.00 35.93 4.24
2802 2838 1.878775 CAGTGGTAAAGCTGCTGCC 59.121 57.895 12.44 7.07 40.80 4.85
2803 2839 0.607489 CAGTGGTAAAGCTGCTGCCT 60.607 55.000 12.44 2.45 40.80 4.75
2804 2840 0.111253 AGTGGTAAAGCTGCTGCCTT 59.889 50.000 12.44 8.34 40.80 4.35
2805 2841 0.242017 GTGGTAAAGCTGCTGCCTTG 59.758 55.000 12.44 0.00 40.80 3.61
2806 2842 0.178992 TGGTAAAGCTGCTGCCTTGT 60.179 50.000 12.44 0.00 40.80 3.16
2807 2843 0.242017 GGTAAAGCTGCTGCCTTGTG 59.758 55.000 12.44 0.00 40.80 3.33
2808 2844 1.238439 GTAAAGCTGCTGCCTTGTGA 58.762 50.000 12.44 0.00 40.80 3.58
2809 2845 1.068954 GTAAAGCTGCTGCCTTGTGAC 60.069 52.381 12.44 0.00 40.80 3.67
2810 2846 1.458639 AAAGCTGCTGCCTTGTGACC 61.459 55.000 12.44 0.00 40.80 4.02
2811 2847 2.595463 GCTGCTGCCTTGTGACCA 60.595 61.111 3.85 0.00 0.00 4.02
2812 2848 1.975407 GCTGCTGCCTTGTGACCAT 60.975 57.895 3.85 0.00 0.00 3.55
2813 2849 1.880894 CTGCTGCCTTGTGACCATG 59.119 57.895 0.00 0.00 0.00 3.66
2814 2850 0.607217 CTGCTGCCTTGTGACCATGA 60.607 55.000 0.00 0.00 0.00 3.07
2815 2851 0.607217 TGCTGCCTTGTGACCATGAG 60.607 55.000 0.00 0.00 0.00 2.90
2816 2852 1.310933 GCTGCCTTGTGACCATGAGG 61.311 60.000 0.00 0.00 42.21 3.86
2826 2862 4.617875 CCATGAGGTCACGGGTTC 57.382 61.111 0.00 0.00 0.00 3.62
2827 2863 1.676968 CCATGAGGTCACGGGTTCA 59.323 57.895 0.00 0.00 0.00 3.18
2828 2864 0.036164 CCATGAGGTCACGGGTTCAA 59.964 55.000 0.00 0.00 0.00 2.69
2829 2865 1.442769 CATGAGGTCACGGGTTCAAG 58.557 55.000 0.00 0.00 0.00 3.02
2830 2866 1.056660 ATGAGGTCACGGGTTCAAGT 58.943 50.000 0.00 0.00 0.00 3.16
2831 2867 0.391597 TGAGGTCACGGGTTCAAGTC 59.608 55.000 0.00 0.00 0.00 3.01
2832 2868 0.320508 GAGGTCACGGGTTCAAGTCC 60.321 60.000 0.00 0.00 0.00 3.85
2833 2869 1.302271 GGTCACGGGTTCAAGTCCC 60.302 63.158 0.00 0.00 41.41 4.46
2839 2875 2.637521 GGGTTCAAGTCCCGGAAAC 58.362 57.895 0.73 0.00 35.27 2.78
2840 2876 0.179012 GGGTTCAAGTCCCGGAAACA 60.179 55.000 0.73 0.00 35.27 2.83
2841 2877 1.235724 GGTTCAAGTCCCGGAAACAG 58.764 55.000 0.73 0.00 31.10 3.16
2842 2878 0.591659 GTTCAAGTCCCGGAAACAGC 59.408 55.000 0.73 0.00 0.00 4.40
2843 2879 0.536460 TTCAAGTCCCGGAAACAGCC 60.536 55.000 0.73 0.00 0.00 4.85
2844 2880 1.073199 CAAGTCCCGGAAACAGCCT 59.927 57.895 0.73 0.00 0.00 4.58
2845 2881 0.955919 CAAGTCCCGGAAACAGCCTC 60.956 60.000 0.73 0.00 0.00 4.70
2846 2882 1.128188 AAGTCCCGGAAACAGCCTCT 61.128 55.000 0.73 0.00 0.00 3.69
2847 2883 1.128188 AGTCCCGGAAACAGCCTCTT 61.128 55.000 0.73 0.00 0.00 2.85
2848 2884 0.611714 GTCCCGGAAACAGCCTCTTA 59.388 55.000 0.73 0.00 0.00 2.10
2849 2885 0.611714 TCCCGGAAACAGCCTCTTAC 59.388 55.000 0.73 0.00 0.00 2.34
2850 2886 0.323629 CCCGGAAACAGCCTCTTACA 59.676 55.000 0.73 0.00 0.00 2.41
2851 2887 1.676014 CCCGGAAACAGCCTCTTACAG 60.676 57.143 0.73 0.00 0.00 2.74
2852 2888 1.275291 CCGGAAACAGCCTCTTACAGA 59.725 52.381 0.00 0.00 0.00 3.41
2853 2889 2.289444 CCGGAAACAGCCTCTTACAGAA 60.289 50.000 0.00 0.00 0.00 3.02
2854 2890 3.399330 CGGAAACAGCCTCTTACAGAAA 58.601 45.455 0.00 0.00 0.00 2.52
2855 2891 4.003648 CGGAAACAGCCTCTTACAGAAAT 58.996 43.478 0.00 0.00 0.00 2.17
2856 2892 4.142816 CGGAAACAGCCTCTTACAGAAATG 60.143 45.833 0.00 0.00 0.00 2.32
2857 2893 4.762251 GGAAACAGCCTCTTACAGAAATGT 59.238 41.667 0.00 0.00 0.00 2.71
2858 2894 5.938125 GGAAACAGCCTCTTACAGAAATGTA 59.062 40.000 0.00 0.00 0.00 2.29
2859 2895 6.092807 GGAAACAGCCTCTTACAGAAATGTAG 59.907 42.308 0.00 0.00 0.00 2.74
2860 2896 5.091261 ACAGCCTCTTACAGAAATGTAGG 57.909 43.478 0.00 0.00 0.00 3.18
2861 2897 4.080863 ACAGCCTCTTACAGAAATGTAGGG 60.081 45.833 0.00 0.66 0.00 3.53
2862 2898 4.162320 CAGCCTCTTACAGAAATGTAGGGA 59.838 45.833 0.00 0.00 0.00 4.20
2863 2899 4.783227 AGCCTCTTACAGAAATGTAGGGAA 59.217 41.667 0.00 0.00 0.00 3.97
2864 2900 5.250774 AGCCTCTTACAGAAATGTAGGGAAA 59.749 40.000 0.00 0.00 0.00 3.13
2865 2901 5.586643 GCCTCTTACAGAAATGTAGGGAAAG 59.413 44.000 0.00 0.00 0.00 2.62
2866 2902 6.116126 CCTCTTACAGAAATGTAGGGAAAGG 58.884 44.000 0.00 0.00 0.00 3.11
2867 2903 5.497474 TCTTACAGAAATGTAGGGAAAGGC 58.503 41.667 0.00 0.00 0.00 4.35
2868 2904 5.250774 TCTTACAGAAATGTAGGGAAAGGCT 59.749 40.000 0.00 0.00 0.00 4.58
2869 2905 3.690460 ACAGAAATGTAGGGAAAGGCTG 58.310 45.455 0.00 0.00 0.00 4.85
2870 2906 2.424956 CAGAAATGTAGGGAAAGGCTGC 59.575 50.000 0.00 0.00 0.00 5.25
2871 2907 1.401905 GAAATGTAGGGAAAGGCTGCG 59.598 52.381 0.00 0.00 0.00 5.18
2872 2908 0.328258 AATGTAGGGAAAGGCTGCGT 59.672 50.000 0.00 0.00 0.00 5.24
2873 2909 1.200519 ATGTAGGGAAAGGCTGCGTA 58.799 50.000 0.00 0.00 0.00 4.42
2874 2910 0.248289 TGTAGGGAAAGGCTGCGTAC 59.752 55.000 0.00 0.00 37.28 3.67
2875 2911 0.248289 GTAGGGAAAGGCTGCGTACA 59.752 55.000 0.00 0.00 36.89 2.90
2876 2912 0.978151 TAGGGAAAGGCTGCGTACAA 59.022 50.000 0.00 0.00 0.00 2.41
2877 2913 0.328258 AGGGAAAGGCTGCGTACAAT 59.672 50.000 0.00 0.00 0.00 2.71
2878 2914 1.557832 AGGGAAAGGCTGCGTACAATA 59.442 47.619 0.00 0.00 0.00 1.90
2879 2915 1.940613 GGGAAAGGCTGCGTACAATAG 59.059 52.381 0.00 0.00 0.00 1.73
2880 2916 2.419574 GGGAAAGGCTGCGTACAATAGA 60.420 50.000 0.00 0.00 0.00 1.98
2881 2917 2.608090 GGAAAGGCTGCGTACAATAGAC 59.392 50.000 0.00 0.00 0.00 2.59
2882 2918 2.311124 AAGGCTGCGTACAATAGACC 57.689 50.000 0.00 0.00 0.00 3.85
2883 2919 0.464452 AGGCTGCGTACAATAGACCC 59.536 55.000 0.00 0.00 0.00 4.46
2884 2920 0.177141 GGCTGCGTACAATAGACCCA 59.823 55.000 0.00 0.00 0.00 4.51
2885 2921 1.406341 GGCTGCGTACAATAGACCCAA 60.406 52.381 0.00 0.00 0.00 4.12
2886 2922 2.352388 GCTGCGTACAATAGACCCAAA 58.648 47.619 0.00 0.00 0.00 3.28
2887 2923 2.351726 GCTGCGTACAATAGACCCAAAG 59.648 50.000 0.00 0.00 0.00 2.77
2888 2924 3.596214 CTGCGTACAATAGACCCAAAGT 58.404 45.455 0.00 0.00 0.00 2.66
2889 2925 3.331150 TGCGTACAATAGACCCAAAGTG 58.669 45.455 0.00 0.00 0.00 3.16
2890 2926 2.676342 GCGTACAATAGACCCAAAGTGG 59.324 50.000 0.00 0.00 37.25 4.00
2891 2927 3.867216 GCGTACAATAGACCCAAAGTGGT 60.867 47.826 0.00 0.00 42.79 4.16
2896 2932 4.373771 GACCCAAAGTGGTCGGAC 57.626 61.111 0.00 0.00 44.98 4.79
2897 2933 1.302271 GACCCAAAGTGGTCGGACC 60.302 63.158 20.36 20.36 44.98 4.46
2898 2934 2.033602 CCCAAAGTGGTCGGACCC 59.966 66.667 23.81 14.91 37.50 4.46
2899 2935 2.526046 CCCAAAGTGGTCGGACCCT 61.526 63.158 23.81 16.82 37.50 4.34
2900 2936 1.454539 CCAAAGTGGTCGGACCCTT 59.545 57.895 23.81 21.08 37.50 3.95
2901 2937 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46
2902 2938 0.605589 CAAAGTGGTCGGACCCTTCC 60.606 60.000 23.81 9.51 37.50 3.46
2903 2939 1.775934 AAAGTGGTCGGACCCTTCCC 61.776 60.000 23.81 7.17 38.99 3.97
2904 2940 3.714001 GTGGTCGGACCCTTCCCC 61.714 72.222 23.81 0.00 38.99 4.81
2905 2941 4.257810 TGGTCGGACCCTTCCCCA 62.258 66.667 23.81 0.69 38.99 4.96
2906 2942 3.400054 GGTCGGACCCTTCCCCAG 61.400 72.222 16.55 0.00 38.99 4.45
2907 2943 2.284405 GTCGGACCCTTCCCCAGA 60.284 66.667 0.00 0.00 38.99 3.86
2908 2944 2.284405 TCGGACCCTTCCCCAGAC 60.284 66.667 0.00 0.00 38.99 3.51
2909 2945 3.400054 CGGACCCTTCCCCAGACC 61.400 72.222 0.00 0.00 38.99 3.85
2910 2946 3.015753 GGACCCTTCCCCAGACCC 61.016 72.222 0.00 0.00 35.57 4.46
2911 2947 2.125225 GACCCTTCCCCAGACCCT 59.875 66.667 0.00 0.00 0.00 4.34
2912 2948 2.204151 ACCCTTCCCCAGACCCTG 60.204 66.667 0.00 0.00 0.00 4.45
2913 2949 3.732849 CCCTTCCCCAGACCCTGC 61.733 72.222 0.00 0.00 0.00 4.85
2914 2950 4.101448 CCTTCCCCAGACCCTGCG 62.101 72.222 0.00 0.00 0.00 5.18
2915 2951 4.785453 CTTCCCCAGACCCTGCGC 62.785 72.222 0.00 0.00 0.00 6.09
2936 2972 4.115279 CGGGAGCTACATGCACTG 57.885 61.111 0.00 0.00 45.94 3.66
2937 2973 1.522355 CGGGAGCTACATGCACTGG 60.522 63.158 0.00 0.00 45.94 4.00
2938 2974 1.153086 GGGAGCTACATGCACTGGG 60.153 63.158 0.00 0.00 45.94 4.45
2939 2975 1.153086 GGAGCTACATGCACTGGGG 60.153 63.158 0.00 0.00 45.94 4.96
2940 2976 1.821332 GAGCTACATGCACTGGGGC 60.821 63.158 0.00 0.00 45.94 5.80
2941 2977 2.262774 GAGCTACATGCACTGGGGCT 62.263 60.000 13.29 13.29 45.94 5.19
2942 2978 2.117156 GCTACATGCACTGGGGCTG 61.117 63.158 0.00 0.00 42.31 4.85
2943 2979 2.045045 TACATGCACTGGGGCTGC 60.045 61.111 0.00 0.00 35.03 5.25
2944 2980 3.643595 TACATGCACTGGGGCTGCC 62.644 63.158 11.05 11.05 33.36 4.85
2949 2985 2.203684 CACTGGGGCTGCCCTTTT 60.204 61.111 34.99 17.53 44.66 2.27
2950 2986 1.838396 CACTGGGGCTGCCCTTTTT 60.838 57.895 34.99 15.74 44.66 1.94
2978 3014 5.095490 GGAAGCATGTATTTCGTTTTCCAG 58.905 41.667 0.00 0.00 34.44 3.86
2979 3015 5.335661 GGAAGCATGTATTTCGTTTTCCAGT 60.336 40.000 0.00 0.00 34.44 4.00
3275 3403 8.235905 GCAATCAATCTATTTTCTCTGGCTATC 58.764 37.037 0.00 0.00 0.00 2.08
3313 3441 2.445427 CCCAATTGTGTAGTCATGCCA 58.555 47.619 4.43 0.00 0.00 4.92
3316 3444 3.949754 CCAATTGTGTAGTCATGCCATCT 59.050 43.478 4.43 0.00 0.00 2.90
3317 3445 5.125356 CCAATTGTGTAGTCATGCCATCTA 58.875 41.667 4.43 0.00 0.00 1.98
3318 3446 5.008019 CCAATTGTGTAGTCATGCCATCTAC 59.992 44.000 4.43 0.00 35.86 2.59
3319 3447 5.620738 ATTGTGTAGTCATGCCATCTACT 57.379 39.130 13.72 1.04 36.16 2.57
3320 3448 4.655762 TGTGTAGTCATGCCATCTACTC 57.344 45.455 13.72 11.71 36.16 2.59
3321 3449 3.384789 TGTGTAGTCATGCCATCTACTCC 59.615 47.826 13.72 8.28 36.16 3.85
3322 3450 2.965831 TGTAGTCATGCCATCTACTCCC 59.034 50.000 13.72 0.00 36.16 4.30
3323 3451 2.485966 AGTCATGCCATCTACTCCCT 57.514 50.000 0.00 0.00 0.00 4.20
3324 3452 2.324541 AGTCATGCCATCTACTCCCTC 58.675 52.381 0.00 0.00 0.00 4.30
3325 3453 1.346068 GTCATGCCATCTACTCCCTCC 59.654 57.143 0.00 0.00 0.00 4.30
3326 3454 0.319728 CATGCCATCTACTCCCTCCG 59.680 60.000 0.00 0.00 0.00 4.63
3327 3455 0.105453 ATGCCATCTACTCCCTCCGT 60.105 55.000 0.00 0.00 0.00 4.69
3328 3456 0.325296 TGCCATCTACTCCCTCCGTT 60.325 55.000 0.00 0.00 0.00 4.44
3329 3457 0.389757 GCCATCTACTCCCTCCGTTC 59.610 60.000 0.00 0.00 0.00 3.95
3330 3458 1.041437 CCATCTACTCCCTCCGTTCC 58.959 60.000 0.00 0.00 0.00 3.62
3331 3459 1.688311 CCATCTACTCCCTCCGTTCCA 60.688 57.143 0.00 0.00 0.00 3.53
3332 3460 2.320781 CATCTACTCCCTCCGTTCCAT 58.679 52.381 0.00 0.00 0.00 3.41
3333 3461 3.497332 CATCTACTCCCTCCGTTCCATA 58.503 50.000 0.00 0.00 0.00 2.74
3334 3462 3.897657 TCTACTCCCTCCGTTCCATAT 57.102 47.619 0.00 0.00 0.00 1.78
3335 3463 4.194678 TCTACTCCCTCCGTTCCATATT 57.805 45.455 0.00 0.00 0.00 1.28
3336 3464 5.329191 TCTACTCCCTCCGTTCCATATTA 57.671 43.478 0.00 0.00 0.00 0.98
3337 3465 5.075493 TCTACTCCCTCCGTTCCATATTAC 58.925 45.833 0.00 0.00 0.00 1.89
3338 3466 3.924922 ACTCCCTCCGTTCCATATTACT 58.075 45.455 0.00 0.00 0.00 2.24
3339 3467 3.896272 ACTCCCTCCGTTCCATATTACTC 59.104 47.826 0.00 0.00 0.00 2.59
3340 3468 2.889045 TCCCTCCGTTCCATATTACTCG 59.111 50.000 0.00 0.00 0.00 4.18
3341 3469 2.626743 CCCTCCGTTCCATATTACTCGT 59.373 50.000 0.00 0.00 0.00 4.18
3342 3470 3.305199 CCCTCCGTTCCATATTACTCGTC 60.305 52.174 0.00 0.00 0.00 4.20
3343 3471 3.552541 CTCCGTTCCATATTACTCGTCG 58.447 50.000 0.00 0.00 0.00 5.12
3344 3472 3.205338 TCCGTTCCATATTACTCGTCGA 58.795 45.455 0.00 0.00 0.00 4.20
3345 3473 3.817084 TCCGTTCCATATTACTCGTCGAT 59.183 43.478 0.00 0.00 0.00 3.59
3346 3474 3.912563 CCGTTCCATATTACTCGTCGATG 59.087 47.826 0.00 0.00 0.00 3.84
3347 3475 4.319984 CCGTTCCATATTACTCGTCGATGA 60.320 45.833 7.21 7.21 0.00 2.92
3348 3476 5.391449 CGTTCCATATTACTCGTCGATGAT 58.609 41.667 7.99 1.57 0.00 2.45
3349 3477 5.856986 CGTTCCATATTACTCGTCGATGATT 59.143 40.000 7.99 5.17 0.00 2.57
3350 3478 6.362551 CGTTCCATATTACTCGTCGATGATTT 59.637 38.462 7.99 0.93 0.00 2.17
3351 3479 7.536281 CGTTCCATATTACTCGTCGATGATTTA 59.464 37.037 7.99 0.00 0.00 1.40
3352 3480 8.851416 GTTCCATATTACTCGTCGATGATTTAG 58.149 37.037 7.99 0.00 0.00 1.85
3353 3481 8.107399 TCCATATTACTCGTCGATGATTTAGT 57.893 34.615 7.99 5.17 0.00 2.24
3354 3482 9.223099 TCCATATTACTCGTCGATGATTTAGTA 57.777 33.333 7.99 4.16 0.00 1.82
3355 3483 9.836076 CCATATTACTCGTCGATGATTTAGTAA 57.164 33.333 15.47 15.47 34.84 2.24
3360 3488 9.630098 TTACTCGTCGATGATTTAGTAAAAAGT 57.370 29.630 7.99 0.64 0.00 2.66
3361 3489 8.530269 ACTCGTCGATGATTTAGTAAAAAGTT 57.470 30.769 7.99 0.00 0.00 2.66
3362 3490 8.433126 ACTCGTCGATGATTTAGTAAAAAGTTG 58.567 33.333 7.99 0.00 0.00 3.16
3363 3491 8.301730 TCGTCGATGATTTAGTAAAAAGTTGT 57.698 30.769 2.39 0.00 0.00 3.32
3364 3492 9.409312 TCGTCGATGATTTAGTAAAAAGTTGTA 57.591 29.630 2.39 0.00 0.00 2.41
3365 3493 9.456797 CGTCGATGATTTAGTAAAAAGTTGTAC 57.543 33.333 0.00 0.00 0.00 2.90
3375 3503 7.813852 AGTAAAAAGTTGTACTAGATCAGCG 57.186 36.000 0.00 0.00 0.00 5.18
3376 3504 7.600065 AGTAAAAAGTTGTACTAGATCAGCGA 58.400 34.615 0.00 0.00 0.00 4.93
3377 3505 6.707599 AAAAAGTTGTACTAGATCAGCGAC 57.292 37.500 0.00 0.00 0.00 5.19
3378 3506 3.677190 AGTTGTACTAGATCAGCGACG 57.323 47.619 0.00 0.00 0.00 5.12
3379 3507 3.268330 AGTTGTACTAGATCAGCGACGA 58.732 45.455 0.00 0.00 0.00 4.20
3380 3508 3.310227 AGTTGTACTAGATCAGCGACGAG 59.690 47.826 0.00 0.00 0.00 4.18
3381 3509 2.902523 TGTACTAGATCAGCGACGAGT 58.097 47.619 0.00 0.00 0.00 4.18
3382 3510 4.050852 TGTACTAGATCAGCGACGAGTA 57.949 45.455 0.00 0.00 0.00 2.59
3383 3511 4.436332 TGTACTAGATCAGCGACGAGTAA 58.564 43.478 0.00 0.00 0.00 2.24
3384 3512 5.055144 TGTACTAGATCAGCGACGAGTAAT 58.945 41.667 0.00 0.00 0.00 1.89
3385 3513 6.218746 TGTACTAGATCAGCGACGAGTAATA 58.781 40.000 0.00 0.00 0.00 0.98
3386 3514 6.872547 TGTACTAGATCAGCGACGAGTAATAT 59.127 38.462 0.00 0.00 0.00 1.28
3387 3515 6.171932 ACTAGATCAGCGACGAGTAATATG 57.828 41.667 0.00 0.00 0.00 1.78
3388 3516 4.427096 AGATCAGCGACGAGTAATATGG 57.573 45.455 0.00 0.00 0.00 2.74
3389 3517 4.072839 AGATCAGCGACGAGTAATATGGA 58.927 43.478 0.00 0.00 0.00 3.41
3390 3518 4.519350 AGATCAGCGACGAGTAATATGGAA 59.481 41.667 0.00 0.00 0.00 3.53
3391 3519 3.961182 TCAGCGACGAGTAATATGGAAC 58.039 45.455 0.00 0.00 0.00 3.62
3392 3520 2.719556 CAGCGACGAGTAATATGGAACG 59.280 50.000 0.00 0.00 0.00 3.95
3393 3521 2.049228 GCGACGAGTAATATGGAACGG 58.951 52.381 0.00 0.00 0.00 4.44
3394 3522 2.287188 GCGACGAGTAATATGGAACGGA 60.287 50.000 0.00 0.00 0.00 4.69
3395 3523 3.552541 CGACGAGTAATATGGAACGGAG 58.447 50.000 0.00 0.00 0.00 4.63
3396 3524 3.608707 CGACGAGTAATATGGAACGGAGG 60.609 52.174 0.00 0.00 0.00 4.30
3397 3525 2.626743 ACGAGTAATATGGAACGGAGGG 59.373 50.000 0.00 0.00 0.00 4.30
3398 3526 2.889045 CGAGTAATATGGAACGGAGGGA 59.111 50.000 0.00 0.00 0.00 4.20
3399 3527 3.057456 CGAGTAATATGGAACGGAGGGAG 60.057 52.174 0.00 0.00 0.00 4.30
3413 3541 0.824759 AGGGAGTATCTTCACACGGC 59.175 55.000 0.00 0.00 33.73 5.68
3585 3713 6.399639 TTTGGTTGTAAGAATCAAGGTTCC 57.600 37.500 0.00 0.00 0.00 3.62
3610 3738 2.831894 CTTGAGGCATCCAGCTGGCA 62.832 60.000 28.91 15.98 43.73 4.92
3677 3805 2.965831 TGTGGGATAGTATCAGTGAGGC 59.034 50.000 12.19 0.00 0.00 4.70
3680 3808 3.235200 GGGATAGTATCAGTGAGGCACT 58.765 50.000 12.19 4.65 46.51 4.40
3705 3833 9.956720 CTTGTAAATCAAGTGACATCTCTTTTT 57.043 29.630 0.00 0.00 45.89 1.94
3738 3866 7.165977 GCTGTTTTCTTGCTACAGTTTTTCTAC 59.834 37.037 0.00 0.00 40.99 2.59
3744 3872 8.758633 TCTTGCTACAGTTTTTCTACATACTC 57.241 34.615 0.00 0.00 0.00 2.59
3929 4061 2.095768 CGTCTATGTGGTGCCACTTTTG 60.096 50.000 20.46 11.44 46.30 2.44
3933 4071 2.376808 TGTGGTGCCACTTTTGTTTG 57.623 45.000 20.46 0.00 46.30 2.93
3937 4075 2.503356 TGGTGCCACTTTTGTTTGGAAT 59.497 40.909 0.00 0.00 34.46 3.01
3938 4076 3.054802 TGGTGCCACTTTTGTTTGGAATT 60.055 39.130 0.00 0.00 34.46 2.17
3952 4090 2.120312 TGGAATTGGAGGGCGTGTATA 58.880 47.619 0.00 0.00 0.00 1.47
3982 4120 8.072567 ACGTTACACTAGCTATAATTACTTCGG 58.927 37.037 0.00 0.00 0.00 4.30
4001 6790 2.675844 CGGAATTCATAAGGCACGAACA 59.324 45.455 7.93 0.00 0.00 3.18
4014 6803 2.030213 GCACGAACATTCTCTCATCTGC 59.970 50.000 0.00 0.00 0.00 4.26
4039 6828 3.046087 CGTGACTGGGCTGCACAG 61.046 66.667 29.20 29.20 41.64 3.66
4045 6834 1.298993 CTGGGCTGCACAGTGATCT 59.701 57.895 23.45 0.00 0.00 2.75
4046 6835 1.002990 TGGGCTGCACAGTGATCTG 60.003 57.895 0.00 0.00 46.18 2.90
4055 6844 2.746997 CAGTGATCTGTGTGAGCGG 58.253 57.895 0.00 0.00 36.97 5.52
4057 6846 1.188219 AGTGATCTGTGTGAGCGGGT 61.188 55.000 0.00 0.00 32.98 5.28
4098 6887 2.296752 TGATTGGGACGTGACGAGTTAA 59.703 45.455 13.70 1.87 0.00 2.01
4131 6920 0.392998 ATTGACTGGGTGGCGCTAAG 60.393 55.000 7.64 0.00 0.00 2.18
4143 6932 1.700600 GCGCTAAGCTCCTGTCAAGC 61.701 60.000 0.00 0.00 44.04 4.01
4145 6934 1.082690 GCTAAGCTCCTGTCAAGCAC 58.917 55.000 0.00 0.00 42.35 4.40
4148 6937 0.536006 AAGCTCCTGTCAAGCACACC 60.536 55.000 0.00 0.00 42.35 4.16
4149 6938 1.227943 GCTCCTGTCAAGCACACCA 60.228 57.895 0.00 0.00 39.61 4.17
4150 6939 0.819259 GCTCCTGTCAAGCACACCAA 60.819 55.000 0.00 0.00 39.61 3.67
4151 6940 1.901591 CTCCTGTCAAGCACACCAAT 58.098 50.000 0.00 0.00 0.00 3.16
4152 6941 2.233271 CTCCTGTCAAGCACACCAATT 58.767 47.619 0.00 0.00 0.00 2.32
4153 6942 2.624838 CTCCTGTCAAGCACACCAATTT 59.375 45.455 0.00 0.00 0.00 1.82
4154 6943 2.622942 TCCTGTCAAGCACACCAATTTC 59.377 45.455 0.00 0.00 0.00 2.17
4155 6944 2.288395 CCTGTCAAGCACACCAATTTCC 60.288 50.000 0.00 0.00 0.00 3.13
4156 6945 2.624838 CTGTCAAGCACACCAATTTCCT 59.375 45.455 0.00 0.00 0.00 3.36
4157 6946 3.820467 CTGTCAAGCACACCAATTTCCTA 59.180 43.478 0.00 0.00 0.00 2.94
4158 6947 4.211125 TGTCAAGCACACCAATTTCCTAA 58.789 39.130 0.00 0.00 0.00 2.69
4159 6948 4.832266 TGTCAAGCACACCAATTTCCTAAT 59.168 37.500 0.00 0.00 0.00 1.73
4213 7066 9.893305 GTATAATAAATGGTGTTACTTCATGCC 57.107 33.333 0.00 0.00 0.00 4.40
4214 7067 5.852282 ATAAATGGTGTTACTTCATGCCC 57.148 39.130 0.00 0.00 0.00 5.36
4215 7068 1.750193 ATGGTGTTACTTCATGCCCG 58.250 50.000 0.00 0.00 0.00 6.13
4216 7069 0.958382 TGGTGTTACTTCATGCCCGC 60.958 55.000 0.00 0.00 0.00 6.13
4218 7071 0.878416 GTGTTACTTCATGCCCGCAA 59.122 50.000 0.00 0.00 0.00 4.85
4219 7072 1.472480 GTGTTACTTCATGCCCGCAAT 59.528 47.619 0.00 0.00 0.00 3.56
4220 7073 1.472082 TGTTACTTCATGCCCGCAATG 59.528 47.619 0.00 0.00 0.00 2.82
4221 7074 1.742831 GTTACTTCATGCCCGCAATGA 59.257 47.619 0.00 0.00 0.00 2.57
4222 7075 1.378531 TACTTCATGCCCGCAATGAC 58.621 50.000 0.00 0.00 0.00 3.06
4223 7076 0.608856 ACTTCATGCCCGCAATGACA 60.609 50.000 0.00 0.00 0.00 3.58
4224 7077 0.742505 CTTCATGCCCGCAATGACAT 59.257 50.000 0.00 0.00 0.00 3.06
4225 7078 1.948834 CTTCATGCCCGCAATGACATA 59.051 47.619 0.00 0.00 0.00 2.29
4226 7079 2.049888 TCATGCCCGCAATGACATAA 57.950 45.000 0.00 0.00 0.00 1.90
4227 7080 2.585330 TCATGCCCGCAATGACATAAT 58.415 42.857 0.00 0.00 0.00 1.28
4228 7081 2.553602 TCATGCCCGCAATGACATAATC 59.446 45.455 0.00 0.00 0.00 1.75
4229 7082 2.049888 TGCCCGCAATGACATAATCA 57.950 45.000 0.00 0.00 43.13 2.57
4243 7096 7.940178 TGACATAATCATCGGTATGTACAAC 57.060 36.000 0.00 0.00 40.26 3.32
4244 7097 7.722363 TGACATAATCATCGGTATGTACAACT 58.278 34.615 0.00 0.00 40.26 3.16
4245 7098 8.201464 TGACATAATCATCGGTATGTACAACTT 58.799 33.333 0.00 0.00 40.26 2.66
4246 7099 8.958119 ACATAATCATCGGTATGTACAACTTT 57.042 30.769 0.00 0.00 38.79 2.66
4247 7100 8.826710 ACATAATCATCGGTATGTACAACTTTG 58.173 33.333 0.00 0.00 38.79 2.77
4248 7101 9.040939 CATAATCATCGGTATGTACAACTTTGA 57.959 33.333 0.00 0.00 34.50 2.69
4249 7102 6.903883 ATCATCGGTATGTACAACTTTGAC 57.096 37.500 0.00 0.00 34.50 3.18
4250 7103 4.860352 TCATCGGTATGTACAACTTTGACG 59.140 41.667 0.00 0.00 34.50 4.35
4251 7104 4.502171 TCGGTATGTACAACTTTGACGA 57.498 40.909 0.00 0.99 0.00 4.20
4252 7105 4.869215 TCGGTATGTACAACTTTGACGAA 58.131 39.130 0.00 0.00 0.00 3.85
4253 7106 4.919168 TCGGTATGTACAACTTTGACGAAG 59.081 41.667 0.00 0.50 41.32 3.79
4254 7107 4.433805 CGGTATGTACAACTTTGACGAAGC 60.434 45.833 0.00 0.00 39.04 3.86
4292 7145 3.710209 CATTCATGGATCCTCTACCCC 57.290 52.381 14.23 0.00 0.00 4.95
4336 7192 5.661056 TGGATCATCGTTACTCTTGTCTT 57.339 39.130 0.00 0.00 0.00 3.01
4343 7199 2.798283 CGTTACTCTTGTCTTGCGGAAA 59.202 45.455 0.00 0.00 0.00 3.13
4393 7249 5.358922 ACATGTCTTGTGTCAAAATTTGGG 58.641 37.500 5.83 0.00 37.11 4.12
4479 7357 7.776933 TGGATTCATCTTGAGAAGTATTTCG 57.223 36.000 0.00 0.00 38.38 3.46
4497 7375 8.349983 AGTATTTCGGGAATATTGTTATGTTGC 58.650 33.333 0.00 0.00 33.03 4.17
4514 7392 2.145397 TGCGTTCTGGGTAGAGAGAT 57.855 50.000 0.00 0.00 33.70 2.75
4543 7421 2.695127 TGAGAGAGGTAGGAGACGAC 57.305 55.000 0.00 0.00 34.90 4.34
4566 7444 1.419387 CCCTCAAGAGATAAGGCAGGG 59.581 57.143 0.00 0.00 33.36 4.45
4567 7445 1.419387 CCTCAAGAGATAAGGCAGGGG 59.581 57.143 0.00 0.00 0.00 4.79
4576 7454 2.180159 TAAGGCAGGGGAACGAGTGC 62.180 60.000 0.00 0.00 35.07 4.40
4580 7458 3.003763 AGGGGAACGAGTGCCTCC 61.004 66.667 0.00 0.00 37.99 4.30
4614 7492 2.330041 GGTCCGCACCAAAACACG 59.670 61.111 0.00 0.00 43.17 4.49
4616 7494 1.298041 GTCCGCACCAAAACACGTG 60.298 57.895 15.48 15.48 0.00 4.49
4617 7495 2.025441 CCGCACCAAAACACGTGG 59.975 61.111 21.57 3.65 42.28 4.94
4618 7496 2.653766 CGCACCAAAACACGTGGC 60.654 61.111 21.57 10.49 40.02 5.01
4619 7497 2.653766 GCACCAAAACACGTGGCG 60.654 61.111 21.57 4.66 40.02 5.69
4620 7498 2.795297 CACCAAAACACGTGGCGT 59.205 55.556 21.57 5.00 42.36 5.68
4621 7499 1.298041 CACCAAAACACGTGGCGTC 60.298 57.895 21.57 0.00 38.32 5.19
4623 7501 0.179078 ACCAAAACACGTGGCGTCTA 60.179 50.000 21.57 0.00 38.32 2.59
4624 7502 0.511221 CCAAAACACGTGGCGTCTAG 59.489 55.000 21.57 2.71 38.32 2.43
4625 7503 0.511221 CAAAACACGTGGCGTCTAGG 59.489 55.000 21.57 0.00 38.32 3.02
4627 7505 0.599204 AAACACGTGGCGTCTAGGTG 60.599 55.000 21.57 12.01 38.32 4.00
4629 7507 1.443872 CACGTGGCGTCTAGGTGAC 60.444 63.158 7.95 0.00 38.32 3.67
4702 8083 3.311966 GTGACTGAAAAATGGCAGAAGC 58.688 45.455 0.00 0.00 41.10 3.86
4703 8084 2.957680 TGACTGAAAAATGGCAGAAGCA 59.042 40.909 0.00 0.00 44.61 3.91
4822 8203 1.064463 TGAAATCCATCCCAGACCAGC 60.064 52.381 0.00 0.00 0.00 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.961511 TTCGCGTCGTGGCTGCTT 62.962 61.111 5.77 0.00 0.00 3.91
7 8 4.126390 CAGCAGCTTCGCGTCGTG 62.126 66.667 5.77 0.00 36.85 4.35
83 84 2.091885 GGTATGCAGGAATTGGGAGGAA 60.092 50.000 0.00 0.00 0.00 3.36
89 90 3.217626 GAAGGAGGTATGCAGGAATTGG 58.782 50.000 0.00 0.00 0.00 3.16
165 172 1.277273 TCCTGAGGACGTCTCTTCGTA 59.723 52.381 16.46 0.00 44.21 3.43
210 217 1.304952 CAGACGAGGAGGAGGAGGT 59.695 63.158 0.00 0.00 0.00 3.85
306 313 3.557595 GCTAAATCTCGACCATGTTGAGG 59.442 47.826 10.74 0.00 42.57 3.86
335 342 7.908193 AAATAACGTTTTCACACTGTCATTC 57.092 32.000 5.91 0.00 0.00 2.67
340 347 9.393249 CAATGATAAATAACGTTTTCACACTGT 57.607 29.630 5.91 0.00 0.00 3.55
348 355 6.528774 GCGGGAACAATGATAAATAACGTTTT 59.471 34.615 5.91 0.00 0.00 2.43
349 356 6.031471 GCGGGAACAATGATAAATAACGTTT 58.969 36.000 5.91 0.00 0.00 3.60
350 357 5.124138 TGCGGGAACAATGATAAATAACGTT 59.876 36.000 5.88 5.88 0.00 3.99
369 376 2.162681 AGGTGAAGAAAGAATTGCGGG 58.837 47.619 0.00 0.00 0.00 6.13
370 377 5.567138 AATAGGTGAAGAAAGAATTGCGG 57.433 39.130 0.00 0.00 0.00 5.69
409 416 1.133513 ACCATGCCTGAAGTGAACCAA 60.134 47.619 0.00 0.00 0.00 3.67
413 420 0.111061 AGCACCATGCCTGAAGTGAA 59.889 50.000 0.00 0.00 46.52 3.18
417 424 2.219458 CTATCAGCACCATGCCTGAAG 58.781 52.381 11.36 7.83 46.52 3.02
420 427 2.328235 GCTATCAGCACCATGCCTG 58.672 57.895 0.00 0.00 46.52 4.85
437 444 2.613977 CCCCTATCTCGTCCATCATTGC 60.614 54.545 0.00 0.00 0.00 3.56
449 456 1.139853 CAGCACCTTCACCCCTATCTC 59.860 57.143 0.00 0.00 0.00 2.75
456 463 0.883833 CATCAACAGCACCTTCACCC 59.116 55.000 0.00 0.00 0.00 4.61
470 477 1.202639 ACCTGTGTTGACGAGCATCAA 60.203 47.619 0.00 0.00 36.23 2.57
473 480 2.831685 TTACCTGTGTTGACGAGCAT 57.168 45.000 0.00 0.00 0.00 3.79
474 481 2.831685 ATTACCTGTGTTGACGAGCA 57.168 45.000 0.00 0.00 0.00 4.26
491 498 5.129320 GGGGAAGCATATTGGTGAAAGAATT 59.871 40.000 0.00 0.00 0.00 2.17
510 517 0.404040 AACATCGAAGGCAAGGGGAA 59.596 50.000 0.00 0.00 0.00 3.97
523 530 7.061210 CAGTTCTCACACTAAACTAGAACATCG 59.939 40.741 14.02 1.44 45.38 3.84
530 537 7.653647 ACTTCTCAGTTCTCACACTAAACTAG 58.346 38.462 0.00 0.00 32.20 2.57
537 544 7.064847 CGTATAGTACTTCTCAGTTCTCACACT 59.935 40.741 0.00 0.00 33.06 3.55
542 549 6.538021 TGACCGTATAGTACTTCTCAGTTCTC 59.462 42.308 0.00 0.00 33.06 2.87
543 550 6.315891 GTGACCGTATAGTACTTCTCAGTTCT 59.684 42.308 0.00 0.00 35.06 3.01
544 551 6.485393 GTGACCGTATAGTACTTCTCAGTTC 58.515 44.000 0.00 0.00 34.06 3.01
545 552 5.064452 CGTGACCGTATAGTACTTCTCAGTT 59.936 44.000 0.00 0.00 34.06 3.16
546 553 4.569966 CGTGACCGTATAGTACTTCTCAGT 59.430 45.833 0.00 0.00 36.99 3.41
547 554 5.080642 CGTGACCGTATAGTACTTCTCAG 57.919 47.826 0.00 0.00 0.00 3.35
678 687 9.914834 AGAGAGACTACTTTGATAGTACTTCAT 57.085 33.333 0.00 0.00 38.33 2.57
815 830 7.667219 ACCATCATTAGAACTGAAACAGATTGT 59.333 33.333 5.76 0.00 35.18 2.71
850 865 3.020274 AGGATCTCCGATATCCACATCG 58.980 50.000 13.73 0.00 44.62 3.84
1011 1028 2.333926 TGTTTCTTACGGTCAGCATCG 58.666 47.619 0.00 0.00 0.00 3.84
1063 1080 1.444553 CAGCAAGACCCTCGTCGTC 60.445 63.158 0.00 0.00 44.28 4.20
1065 1082 2.125912 CCAGCAAGACCCTCGTCG 60.126 66.667 0.00 0.00 44.28 5.12
1073 1090 1.109323 AGCACAAACCCCAGCAAGAC 61.109 55.000 0.00 0.00 0.00 3.01
1170 1187 9.019764 CGTCTTTACTTTCATCAAACACAAAAT 57.980 29.630 0.00 0.00 0.00 1.82
1312 1331 3.671928 GCTTGCAGCAAAGAACATTACAG 59.328 43.478 9.65 0.00 41.89 2.74
1384 1403 7.915923 CCGTTATATGGCACTACTATATGACTG 59.084 40.741 0.00 0.00 36.88 3.51
1455 1474 5.695816 GGCAAAGCAGTTCATCAAATAACAA 59.304 36.000 0.00 0.00 0.00 2.83
1883 1904 5.369404 TGATTGCCTCCTTATGTGAAGGATA 59.631 40.000 6.50 0.00 44.75 2.59
1922 1943 2.770164 ACAGAACCGGGAAGAGAATG 57.230 50.000 6.32 0.00 0.00 2.67
1923 1944 3.412386 CAAACAGAACCGGGAAGAGAAT 58.588 45.455 6.32 0.00 0.00 2.40
1926 1947 0.875059 GCAAACAGAACCGGGAAGAG 59.125 55.000 6.32 0.00 0.00 2.85
1975 1998 0.827368 CAGTAGGAGCTTGAGGACCC 59.173 60.000 0.00 0.00 0.00 4.46
2166 2189 2.436646 GTGCCATCCAGGTGACCG 60.437 66.667 0.00 0.00 40.61 4.79
2352 2375 5.163301 TGGCACCTAGACTCCAATTCTAATC 60.163 44.000 0.00 0.00 0.00 1.75
2561 2597 2.764010 TGATTTCGCTAAGGCTACAGGA 59.236 45.455 0.00 0.00 36.09 3.86
2588 2624 6.591448 GTCGGATGCATATTCTCATGAATACA 59.409 38.462 0.00 0.00 44.83 2.29
2703 2739 1.142870 TGATCATTTTAGGAGGGGCCG 59.857 52.381 0.00 0.00 43.43 6.13
2742 2778 7.967854 TCAAATACATGCTTCCAACGAATAAAG 59.032 33.333 0.00 0.00 0.00 1.85
2773 2809 3.605749 TACCACTGCGCCAAGGCTC 62.606 63.158 4.18 1.20 39.32 4.70
2774 2810 2.690653 TTTACCACTGCGCCAAGGCT 62.691 55.000 4.18 0.00 39.32 4.58
2775 2811 2.200170 CTTTACCACTGCGCCAAGGC 62.200 60.000 4.18 0.00 37.85 4.35
2776 2812 1.875963 CTTTACCACTGCGCCAAGG 59.124 57.895 4.18 6.21 0.00 3.61
2777 2813 1.210155 GCTTTACCACTGCGCCAAG 59.790 57.895 4.18 0.00 0.00 3.61
2778 2814 1.228124 AGCTTTACCACTGCGCCAA 60.228 52.632 4.18 0.00 0.00 4.52
2779 2815 1.965930 CAGCTTTACCACTGCGCCA 60.966 57.895 4.18 0.00 0.00 5.69
2780 2816 2.870372 CAGCTTTACCACTGCGCC 59.130 61.111 4.18 0.00 0.00 6.53
2784 2820 0.607489 AGGCAGCAGCTTTACCACTG 60.607 55.000 0.00 0.00 41.70 3.66
2785 2821 0.111253 AAGGCAGCAGCTTTACCACT 59.889 50.000 0.00 0.00 38.40 4.00
2786 2822 0.242017 CAAGGCAGCAGCTTTACCAC 59.758 55.000 0.00 0.00 38.07 4.16
2787 2823 0.178992 ACAAGGCAGCAGCTTTACCA 60.179 50.000 0.00 0.00 38.07 3.25
2788 2824 0.242017 CACAAGGCAGCAGCTTTACC 59.758 55.000 0.00 0.00 38.07 2.85
2789 2825 1.068954 GTCACAAGGCAGCAGCTTTAC 60.069 52.381 0.00 0.00 38.07 2.01
2790 2826 1.238439 GTCACAAGGCAGCAGCTTTA 58.762 50.000 0.00 0.00 38.07 1.85
2791 2827 1.458639 GGTCACAAGGCAGCAGCTTT 61.459 55.000 0.00 0.00 41.17 3.51
2792 2828 1.900498 GGTCACAAGGCAGCAGCTT 60.900 57.895 0.00 0.00 41.70 3.74
2793 2829 2.282040 GGTCACAAGGCAGCAGCT 60.282 61.111 0.00 0.00 41.70 4.24
2794 2830 1.975407 ATGGTCACAAGGCAGCAGC 60.975 57.895 0.00 0.00 41.10 5.25
2795 2831 0.607217 TCATGGTCACAAGGCAGCAG 60.607 55.000 0.00 0.00 0.00 4.24
2796 2832 0.607217 CTCATGGTCACAAGGCAGCA 60.607 55.000 0.00 0.00 0.00 4.41
2797 2833 1.310933 CCTCATGGTCACAAGGCAGC 61.311 60.000 0.00 0.00 0.00 5.25
2798 2834 0.037303 ACCTCATGGTCACAAGGCAG 59.963 55.000 0.00 0.00 44.78 4.85
2799 2835 2.154139 ACCTCATGGTCACAAGGCA 58.846 52.632 0.00 0.00 44.78 4.75
2810 2846 1.270839 ACTTGAACCCGTGACCTCATG 60.271 52.381 0.00 0.00 0.00 3.07
2811 2847 1.002087 GACTTGAACCCGTGACCTCAT 59.998 52.381 0.00 0.00 0.00 2.90
2812 2848 0.391597 GACTTGAACCCGTGACCTCA 59.608 55.000 0.00 0.00 0.00 3.86
2813 2849 0.320508 GGACTTGAACCCGTGACCTC 60.321 60.000 0.00 0.00 0.00 3.85
2814 2850 1.752833 GGACTTGAACCCGTGACCT 59.247 57.895 0.00 0.00 0.00 3.85
2815 2851 1.302271 GGGACTTGAACCCGTGACC 60.302 63.158 0.00 0.00 37.85 4.02
2816 2852 4.373771 GGGACTTGAACCCGTGAC 57.626 61.111 0.00 0.00 37.85 3.67
2821 2857 0.179012 TGTTTCCGGGACTTGAACCC 60.179 55.000 0.00 0.00 43.57 4.11
2822 2858 1.235724 CTGTTTCCGGGACTTGAACC 58.764 55.000 0.00 0.00 0.00 3.62
2823 2859 0.591659 GCTGTTTCCGGGACTTGAAC 59.408 55.000 0.00 0.00 0.00 3.18
2824 2860 0.536460 GGCTGTTTCCGGGACTTGAA 60.536 55.000 0.00 0.00 0.00 2.69
2825 2861 1.072505 GGCTGTTTCCGGGACTTGA 59.927 57.895 0.00 0.00 0.00 3.02
2826 2862 0.955919 GAGGCTGTTTCCGGGACTTG 60.956 60.000 0.00 0.32 0.00 3.16
2827 2863 1.128188 AGAGGCTGTTTCCGGGACTT 61.128 55.000 0.00 0.00 0.00 3.01
2828 2864 1.128188 AAGAGGCTGTTTCCGGGACT 61.128 55.000 0.00 0.00 0.00 3.85
2829 2865 0.611714 TAAGAGGCTGTTTCCGGGAC 59.388 55.000 0.90 1.11 0.00 4.46
2830 2866 0.611714 GTAAGAGGCTGTTTCCGGGA 59.388 55.000 0.90 0.00 0.00 5.14
2831 2867 0.323629 TGTAAGAGGCTGTTTCCGGG 59.676 55.000 0.90 0.00 0.00 5.73
2832 2868 1.275291 TCTGTAAGAGGCTGTTTCCGG 59.725 52.381 0.90 0.00 38.67 5.14
2833 2869 2.743636 TCTGTAAGAGGCTGTTTCCG 57.256 50.000 0.90 0.00 38.67 4.30
2844 2880 5.250774 AGCCTTTCCCTACATTTCTGTAAGA 59.749 40.000 0.00 0.00 44.68 2.10
2845 2881 5.355350 CAGCCTTTCCCTACATTTCTGTAAG 59.645 44.000 0.00 0.00 37.41 2.34
2846 2882 5.253330 CAGCCTTTCCCTACATTTCTGTAA 58.747 41.667 0.00 0.00 37.41 2.41
2847 2883 4.843728 CAGCCTTTCCCTACATTTCTGTA 58.156 43.478 0.00 0.00 36.79 2.74
2848 2884 3.690460 CAGCCTTTCCCTACATTTCTGT 58.310 45.455 0.00 0.00 39.49 3.41
2849 2885 2.424956 GCAGCCTTTCCCTACATTTCTG 59.575 50.000 0.00 0.00 0.00 3.02
2850 2886 2.728007 GCAGCCTTTCCCTACATTTCT 58.272 47.619 0.00 0.00 0.00 2.52
2851 2887 1.401905 CGCAGCCTTTCCCTACATTTC 59.598 52.381 0.00 0.00 0.00 2.17
2852 2888 1.271926 ACGCAGCCTTTCCCTACATTT 60.272 47.619 0.00 0.00 0.00 2.32
2853 2889 0.328258 ACGCAGCCTTTCCCTACATT 59.672 50.000 0.00 0.00 0.00 2.71
2854 2890 1.134491 GTACGCAGCCTTTCCCTACAT 60.134 52.381 0.00 0.00 0.00 2.29
2855 2891 0.248289 GTACGCAGCCTTTCCCTACA 59.752 55.000 0.00 0.00 0.00 2.74
2856 2892 0.248289 TGTACGCAGCCTTTCCCTAC 59.752 55.000 0.00 0.00 0.00 3.18
2857 2893 0.978151 TTGTACGCAGCCTTTCCCTA 59.022 50.000 0.00 0.00 0.00 3.53
2858 2894 0.328258 ATTGTACGCAGCCTTTCCCT 59.672 50.000 0.00 0.00 0.00 4.20
2859 2895 1.940613 CTATTGTACGCAGCCTTTCCC 59.059 52.381 0.00 0.00 0.00 3.97
2860 2896 2.608090 GTCTATTGTACGCAGCCTTTCC 59.392 50.000 0.00 0.00 0.00 3.13
2861 2897 2.608090 GGTCTATTGTACGCAGCCTTTC 59.392 50.000 0.00 0.00 0.00 2.62
2862 2898 2.629051 GGTCTATTGTACGCAGCCTTT 58.371 47.619 0.00 0.00 0.00 3.11
2863 2899 1.134491 GGGTCTATTGTACGCAGCCTT 60.134 52.381 0.00 0.00 0.00 4.35
2864 2900 0.464452 GGGTCTATTGTACGCAGCCT 59.536 55.000 0.00 0.00 0.00 4.58
2865 2901 0.177141 TGGGTCTATTGTACGCAGCC 59.823 55.000 0.00 0.00 35.18 4.85
2866 2902 2.018542 TTGGGTCTATTGTACGCAGC 57.981 50.000 0.00 0.00 40.36 5.25
2867 2903 3.370978 CACTTTGGGTCTATTGTACGCAG 59.629 47.826 0.00 0.00 40.36 5.18
2868 2904 3.331150 CACTTTGGGTCTATTGTACGCA 58.669 45.455 0.00 0.00 37.94 5.24
2869 2905 2.676342 CCACTTTGGGTCTATTGTACGC 59.324 50.000 0.00 0.00 32.67 4.42
2870 2906 3.934068 ACCACTTTGGGTCTATTGTACG 58.066 45.455 0.00 0.00 43.37 3.67
2880 2916 2.826003 GGGTCCGACCACTTTGGGT 61.826 63.158 19.43 0.00 43.37 4.51
2881 2917 2.033602 GGGTCCGACCACTTTGGG 59.966 66.667 19.43 0.00 43.37 4.12
2882 2918 0.605589 GAAGGGTCCGACCACTTTGG 60.606 60.000 19.43 0.00 41.02 3.28
2883 2919 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.000 19.43 0.00 41.02 2.77
2884 2920 1.759236 GGAAGGGTCCGACCACTTT 59.241 57.895 19.43 9.96 41.02 2.66
2885 2921 2.222013 GGGAAGGGTCCGACCACTT 61.222 63.158 19.43 17.88 46.04 3.16
2886 2922 2.606826 GGGAAGGGTCCGACCACT 60.607 66.667 19.43 10.80 46.04 4.00
2887 2923 3.714001 GGGGAAGGGTCCGACCAC 61.714 72.222 19.43 8.70 46.04 4.16
2888 2924 4.257810 TGGGGAAGGGTCCGACCA 62.258 66.667 19.43 0.00 46.04 4.02
2889 2925 3.400054 CTGGGGAAGGGTCCGACC 61.400 72.222 9.30 9.30 46.04 4.79
2890 2926 2.284405 TCTGGGGAAGGGTCCGAC 60.284 66.667 0.00 0.00 46.04 4.79
2891 2927 2.284405 GTCTGGGGAAGGGTCCGA 60.284 66.667 0.00 0.00 46.04 4.55
2892 2928 3.400054 GGTCTGGGGAAGGGTCCG 61.400 72.222 0.00 0.00 46.04 4.79
2893 2929 3.015753 GGGTCTGGGGAAGGGTCC 61.016 72.222 0.00 0.00 44.10 4.46
2894 2930 2.125225 AGGGTCTGGGGAAGGGTC 59.875 66.667 0.00 0.00 0.00 4.46
2895 2931 2.204151 CAGGGTCTGGGGAAGGGT 60.204 66.667 0.00 0.00 0.00 4.34
2896 2932 3.732849 GCAGGGTCTGGGGAAGGG 61.733 72.222 0.00 0.00 31.21 3.95
2897 2933 4.101448 CGCAGGGTCTGGGGAAGG 62.101 72.222 4.35 0.00 40.11 3.46
2898 2934 4.785453 GCGCAGGGTCTGGGGAAG 62.785 72.222 0.30 0.00 43.28 3.46
2910 2946 4.819761 TAGCTCCCGCTTGCGCAG 62.820 66.667 11.31 6.32 46.47 5.18
2913 2949 2.202932 ATGTAGCTCCCGCTTGCG 60.203 61.111 8.14 8.14 46.47 4.85
2914 2950 2.828128 GCATGTAGCTCCCGCTTGC 61.828 63.158 0.00 0.00 46.47 4.01
2915 2951 1.450134 TGCATGTAGCTCCCGCTTG 60.450 57.895 0.00 0.00 46.47 4.01
2916 2952 1.450312 GTGCATGTAGCTCCCGCTT 60.450 57.895 0.00 0.00 46.47 4.68
2918 2954 2.176273 CAGTGCATGTAGCTCCCGC 61.176 63.158 0.00 0.00 45.94 6.13
2919 2955 1.522355 CCAGTGCATGTAGCTCCCG 60.522 63.158 0.00 0.00 45.94 5.14
2920 2956 1.153086 CCCAGTGCATGTAGCTCCC 60.153 63.158 0.00 0.00 45.94 4.30
2921 2957 1.153086 CCCCAGTGCATGTAGCTCC 60.153 63.158 0.00 0.00 45.94 4.70
2922 2958 1.821332 GCCCCAGTGCATGTAGCTC 60.821 63.158 0.00 0.00 45.94 4.09
2923 2959 2.273449 GCCCCAGTGCATGTAGCT 59.727 61.111 0.00 0.00 45.94 3.32
2924 2960 2.117156 CAGCCCCAGTGCATGTAGC 61.117 63.158 0.00 0.00 45.96 3.58
2925 2961 2.117156 GCAGCCCCAGTGCATGTAG 61.117 63.158 0.00 0.00 40.86 2.74
2926 2962 2.045045 GCAGCCCCAGTGCATGTA 60.045 61.111 0.00 0.00 40.86 2.29
2947 2983 6.276847 ACGAAATACATGCTTCCAACAAAAA 58.723 32.000 0.00 0.00 0.00 1.94
2948 2984 5.837437 ACGAAATACATGCTTCCAACAAAA 58.163 33.333 0.00 0.00 0.00 2.44
2949 2985 5.446143 ACGAAATACATGCTTCCAACAAA 57.554 34.783 0.00 0.00 0.00 2.83
2950 2986 5.446143 AACGAAATACATGCTTCCAACAA 57.554 34.783 0.00 0.00 0.00 2.83
2951 2987 5.446143 AAACGAAATACATGCTTCCAACA 57.554 34.783 0.00 0.00 0.00 3.33
2952 2988 5.344933 GGAAAACGAAATACATGCTTCCAAC 59.655 40.000 0.00 0.00 32.94 3.77
2953 2989 5.010112 TGGAAAACGAAATACATGCTTCCAA 59.990 36.000 0.00 0.00 38.44 3.53
2954 2990 4.520874 TGGAAAACGAAATACATGCTTCCA 59.479 37.500 0.00 0.00 38.93 3.53
2955 2991 5.054390 TGGAAAACGAAATACATGCTTCC 57.946 39.130 0.00 0.00 33.24 3.46
2956 2992 5.699839 ACTGGAAAACGAAATACATGCTTC 58.300 37.500 0.00 0.00 0.00 3.86
2957 2993 5.705609 ACTGGAAAACGAAATACATGCTT 57.294 34.783 0.00 0.00 0.00 3.91
2958 2994 5.705609 AACTGGAAAACGAAATACATGCT 57.294 34.783 0.00 0.00 0.00 3.79
2959 2995 5.344933 GGAAACTGGAAAACGAAATACATGC 59.655 40.000 0.00 0.00 0.00 4.06
2960 2996 6.677913 AGGAAACTGGAAAACGAAATACATG 58.322 36.000 0.00 0.00 41.13 3.21
2961 2997 6.894339 AGGAAACTGGAAAACGAAATACAT 57.106 33.333 0.00 0.00 41.13 2.29
2962 2998 6.702716 AAGGAAACTGGAAAACGAAATACA 57.297 33.333 0.00 0.00 42.68 2.29
2963 2999 7.592533 GGTAAAGGAAACTGGAAAACGAAATAC 59.407 37.037 0.00 0.00 42.68 1.89
2964 3000 7.284944 TGGTAAAGGAAACTGGAAAACGAAATA 59.715 33.333 0.00 0.00 42.68 1.40
2965 3001 6.097129 TGGTAAAGGAAACTGGAAAACGAAAT 59.903 34.615 0.00 0.00 42.68 2.17
2966 3002 5.418209 TGGTAAAGGAAACTGGAAAACGAAA 59.582 36.000 0.00 0.00 42.68 3.46
2967 3003 4.948621 TGGTAAAGGAAACTGGAAAACGAA 59.051 37.500 0.00 0.00 42.68 3.85
3275 3403 0.449388 GGCAGCGAGTTGAAATGAGG 59.551 55.000 0.00 0.00 0.00 3.86
3313 3441 2.777459 ATGGAACGGAGGGAGTAGAT 57.223 50.000 0.00 0.00 0.00 1.98
3316 3444 5.070823 AGTAATATGGAACGGAGGGAGTA 57.929 43.478 0.00 0.00 0.00 2.59
3317 3445 3.896272 GAGTAATATGGAACGGAGGGAGT 59.104 47.826 0.00 0.00 0.00 3.85
3318 3446 3.057456 CGAGTAATATGGAACGGAGGGAG 60.057 52.174 0.00 0.00 0.00 4.30
3319 3447 2.889045 CGAGTAATATGGAACGGAGGGA 59.111 50.000 0.00 0.00 0.00 4.20
3320 3448 2.626743 ACGAGTAATATGGAACGGAGGG 59.373 50.000 0.00 0.00 0.00 4.30
3321 3449 3.608707 CGACGAGTAATATGGAACGGAGG 60.609 52.174 0.00 0.00 0.00 4.30
3322 3450 3.249320 TCGACGAGTAATATGGAACGGAG 59.751 47.826 0.00 0.00 0.00 4.63
3323 3451 3.205338 TCGACGAGTAATATGGAACGGA 58.795 45.455 0.00 0.00 0.00 4.69
3324 3452 3.614159 TCGACGAGTAATATGGAACGG 57.386 47.619 0.00 0.00 0.00 4.44
3325 3453 4.779987 TCATCGACGAGTAATATGGAACG 58.220 43.478 3.01 0.00 0.00 3.95
3326 3454 7.639162 AAATCATCGACGAGTAATATGGAAC 57.361 36.000 3.01 0.00 0.00 3.62
3327 3455 8.573885 ACTAAATCATCGACGAGTAATATGGAA 58.426 33.333 3.01 0.00 0.00 3.53
3328 3456 8.107399 ACTAAATCATCGACGAGTAATATGGA 57.893 34.615 3.01 0.00 0.00 3.41
3329 3457 9.836076 TTACTAAATCATCGACGAGTAATATGG 57.164 33.333 3.01 0.00 0.00 2.74
3334 3462 9.630098 ACTTTTTACTAAATCATCGACGAGTAA 57.370 29.630 3.01 1.77 0.00 2.24
3335 3463 9.630098 AACTTTTTACTAAATCATCGACGAGTA 57.370 29.630 3.01 0.00 0.00 2.59
3336 3464 8.433126 CAACTTTTTACTAAATCATCGACGAGT 58.567 33.333 3.01 0.00 0.00 4.18
3337 3465 8.433126 ACAACTTTTTACTAAATCATCGACGAG 58.567 33.333 3.01 0.00 0.00 4.18
3338 3466 8.301730 ACAACTTTTTACTAAATCATCGACGA 57.698 30.769 0.00 0.00 0.00 4.20
3339 3467 9.456797 GTACAACTTTTTACTAAATCATCGACG 57.543 33.333 0.00 0.00 0.00 5.12
3349 3477 9.350357 CGCTGATCTAGTACAACTTTTTACTAA 57.650 33.333 0.00 0.00 31.82 2.24
3350 3478 8.733458 TCGCTGATCTAGTACAACTTTTTACTA 58.267 33.333 0.00 0.00 30.97 1.82
3351 3479 7.541437 GTCGCTGATCTAGTACAACTTTTTACT 59.459 37.037 0.00 0.00 33.11 2.24
3352 3480 7.461156 CGTCGCTGATCTAGTACAACTTTTTAC 60.461 40.741 0.00 0.00 0.00 2.01
3353 3481 6.525628 CGTCGCTGATCTAGTACAACTTTTTA 59.474 38.462 0.00 0.00 0.00 1.52
3354 3482 5.345202 CGTCGCTGATCTAGTACAACTTTTT 59.655 40.000 0.00 0.00 0.00 1.94
3355 3483 4.857588 CGTCGCTGATCTAGTACAACTTTT 59.142 41.667 0.00 0.00 0.00 2.27
3356 3484 4.155462 TCGTCGCTGATCTAGTACAACTTT 59.845 41.667 0.00 0.00 0.00 2.66
3357 3485 3.688185 TCGTCGCTGATCTAGTACAACTT 59.312 43.478 0.00 0.00 0.00 2.66
3358 3486 3.268330 TCGTCGCTGATCTAGTACAACT 58.732 45.455 0.00 0.00 0.00 3.16
3359 3487 3.063725 ACTCGTCGCTGATCTAGTACAAC 59.936 47.826 0.00 0.00 0.00 3.32
3360 3488 3.268330 ACTCGTCGCTGATCTAGTACAA 58.732 45.455 0.00 0.00 0.00 2.41
3361 3489 2.902523 ACTCGTCGCTGATCTAGTACA 58.097 47.619 0.00 0.00 0.00 2.90
3362 3490 5.594724 ATTACTCGTCGCTGATCTAGTAC 57.405 43.478 0.00 0.00 0.00 2.73
3363 3491 6.313164 CCATATTACTCGTCGCTGATCTAGTA 59.687 42.308 0.00 0.00 0.00 1.82
3364 3492 5.122554 CCATATTACTCGTCGCTGATCTAGT 59.877 44.000 0.00 0.00 0.00 2.57
3365 3493 5.351740 TCCATATTACTCGTCGCTGATCTAG 59.648 44.000 0.00 0.00 0.00 2.43
3366 3494 5.243207 TCCATATTACTCGTCGCTGATCTA 58.757 41.667 0.00 0.00 0.00 1.98
3367 3495 4.072839 TCCATATTACTCGTCGCTGATCT 58.927 43.478 0.00 0.00 0.00 2.75
3368 3496 4.421033 TCCATATTACTCGTCGCTGATC 57.579 45.455 0.00 0.00 0.00 2.92
3369 3497 4.547532 GTTCCATATTACTCGTCGCTGAT 58.452 43.478 0.00 0.00 0.00 2.90
3370 3498 3.547413 CGTTCCATATTACTCGTCGCTGA 60.547 47.826 0.00 0.00 0.00 4.26
3371 3499 2.719556 CGTTCCATATTACTCGTCGCTG 59.280 50.000 0.00 0.00 0.00 5.18
3372 3500 2.287427 CCGTTCCATATTACTCGTCGCT 60.287 50.000 0.00 0.00 0.00 4.93
3373 3501 2.049228 CCGTTCCATATTACTCGTCGC 58.951 52.381 0.00 0.00 0.00 5.19
3374 3502 3.552541 CTCCGTTCCATATTACTCGTCG 58.447 50.000 0.00 0.00 0.00 5.12
3375 3503 3.305199 CCCTCCGTTCCATATTACTCGTC 60.305 52.174 0.00 0.00 0.00 4.20
3376 3504 2.626743 CCCTCCGTTCCATATTACTCGT 59.373 50.000 0.00 0.00 0.00 4.18
3377 3505 2.889045 TCCCTCCGTTCCATATTACTCG 59.111 50.000 0.00 0.00 0.00 4.18
3378 3506 3.896272 ACTCCCTCCGTTCCATATTACTC 59.104 47.826 0.00 0.00 0.00 2.59
3379 3507 3.924922 ACTCCCTCCGTTCCATATTACT 58.075 45.455 0.00 0.00 0.00 2.24
3380 3508 5.715753 AGATACTCCCTCCGTTCCATATTAC 59.284 44.000 0.00 0.00 0.00 1.89
3381 3509 5.900437 AGATACTCCCTCCGTTCCATATTA 58.100 41.667 0.00 0.00 0.00 0.98
3382 3510 4.753186 AGATACTCCCTCCGTTCCATATT 58.247 43.478 0.00 0.00 0.00 1.28
3383 3511 4.405756 AGATACTCCCTCCGTTCCATAT 57.594 45.455 0.00 0.00 0.00 1.78
3384 3512 3.897657 AGATACTCCCTCCGTTCCATA 57.102 47.619 0.00 0.00 0.00 2.74
3385 3513 2.777459 AGATACTCCCTCCGTTCCAT 57.223 50.000 0.00 0.00 0.00 3.41
3386 3514 2.291996 TGAAGATACTCCCTCCGTTCCA 60.292 50.000 0.00 0.00 0.00 3.53
3387 3515 2.101082 GTGAAGATACTCCCTCCGTTCC 59.899 54.545 0.00 0.00 0.00 3.62
3388 3516 2.758979 TGTGAAGATACTCCCTCCGTTC 59.241 50.000 0.00 0.00 0.00 3.95
3389 3517 2.496470 GTGTGAAGATACTCCCTCCGTT 59.504 50.000 0.00 0.00 0.00 4.44
3390 3518 2.100989 GTGTGAAGATACTCCCTCCGT 58.899 52.381 0.00 0.00 0.00 4.69
3391 3519 1.065701 CGTGTGAAGATACTCCCTCCG 59.934 57.143 0.00 0.00 0.00 4.63
3392 3520 1.409427 CCGTGTGAAGATACTCCCTCC 59.591 57.143 0.00 0.00 0.00 4.30
3393 3521 1.202428 GCCGTGTGAAGATACTCCCTC 60.202 57.143 0.00 0.00 0.00 4.30
3394 3522 0.824759 GCCGTGTGAAGATACTCCCT 59.175 55.000 0.00 0.00 0.00 4.20
3395 3523 0.535335 TGCCGTGTGAAGATACTCCC 59.465 55.000 0.00 0.00 0.00 4.30
3396 3524 1.204941 ACTGCCGTGTGAAGATACTCC 59.795 52.381 0.00 0.00 0.00 3.85
3397 3525 2.656560 ACTGCCGTGTGAAGATACTC 57.343 50.000 0.00 0.00 0.00 2.59
3398 3526 4.159693 TCATAACTGCCGTGTGAAGATACT 59.840 41.667 0.00 0.00 0.00 2.12
3399 3527 4.430007 TCATAACTGCCGTGTGAAGATAC 58.570 43.478 0.00 0.00 0.00 2.24
3538 3666 5.290885 AGCAATGTCCTTCGAAAACAAAAAC 59.709 36.000 14.79 7.23 0.00 2.43
3585 3713 0.742281 CTGGATGCCTCAAGTCCACG 60.742 60.000 0.00 0.00 37.12 4.94
3610 3738 6.323739 ACATGACCTCCAACATACAAACTTTT 59.676 34.615 0.00 0.00 0.00 2.27
3705 3833 4.400884 TGTAGCAAGAAAACAGCAGGAAAA 59.599 37.500 0.00 0.00 0.00 2.29
3706 3834 3.951037 TGTAGCAAGAAAACAGCAGGAAA 59.049 39.130 0.00 0.00 0.00 3.13
3707 3835 3.550820 TGTAGCAAGAAAACAGCAGGAA 58.449 40.909 0.00 0.00 0.00 3.36
3744 3872 8.988934 GTCCTACATGTACAACACAATATATGG 58.011 37.037 0.08 0.00 41.55 2.74
3807 3939 6.169094 TCTCAATCAGAGTCATCCTGAAAAC 58.831 40.000 0.00 0.00 44.98 2.43
3929 4061 0.243636 CACGCCCTCCAATTCCAAAC 59.756 55.000 0.00 0.00 0.00 2.93
3933 4071 2.922740 TATACACGCCCTCCAATTCC 57.077 50.000 0.00 0.00 0.00 3.01
3937 4075 3.132646 ACGTATTTATACACGCCCTCCAA 59.867 43.478 0.00 0.00 41.80 3.53
3938 4076 2.694628 ACGTATTTATACACGCCCTCCA 59.305 45.455 0.00 0.00 41.80 3.86
3981 4119 4.900635 ATGTTCGTGCCTTATGAATTCC 57.099 40.909 2.27 0.00 36.72 3.01
3982 4120 6.037610 AGAGAATGTTCGTGCCTTATGAATTC 59.962 38.462 0.00 0.00 36.72 2.17
4014 6803 3.052082 CCCAGTCACGCTGCAAGG 61.052 66.667 0.00 0.00 43.71 3.61
4039 6828 0.320771 AACCCGCTCACACAGATCAC 60.321 55.000 0.00 0.00 0.00 3.06
4040 6829 0.320683 CAACCCGCTCACACAGATCA 60.321 55.000 0.00 0.00 0.00 2.92
4042 6831 0.603707 CACAACCCGCTCACACAGAT 60.604 55.000 0.00 0.00 0.00 2.90
4045 6834 0.602638 GATCACAACCCGCTCACACA 60.603 55.000 0.00 0.00 0.00 3.72
4046 6835 1.626654 CGATCACAACCCGCTCACAC 61.627 60.000 0.00 0.00 0.00 3.82
4048 6837 2.740714 GCGATCACAACCCGCTCAC 61.741 63.158 0.00 0.00 44.83 3.51
4053 6842 3.853330 CTGCGCGATCACAACCCG 61.853 66.667 12.10 0.00 0.00 5.28
4131 6920 0.819259 TTGGTGTGCTTGACAGGAGC 60.819 55.000 0.00 0.00 40.53 4.70
4143 6932 8.147704 ACCAAAAGTAATTAGGAAATTGGTGTG 58.852 33.333 15.07 0.00 45.43 3.82
4156 6945 9.991388 GCAACGTATGAATACCAAAAGTAATTA 57.009 29.630 0.00 0.00 33.70 1.40
4157 6946 8.736244 AGCAACGTATGAATACCAAAAGTAATT 58.264 29.630 0.00 0.00 33.70 1.40
4158 6947 8.276252 AGCAACGTATGAATACCAAAAGTAAT 57.724 30.769 0.00 0.00 33.70 1.89
4159 6948 7.675962 AGCAACGTATGAATACCAAAAGTAA 57.324 32.000 0.00 0.00 33.70 2.24
4208 7061 2.293955 TGATTATGTCATTGCGGGCATG 59.706 45.455 0.00 0.00 0.00 4.06
4219 7072 7.722363 AGTTGTACATACCGATGATTATGTCA 58.278 34.615 0.00 0.00 39.24 3.58
4220 7073 8.589335 AAGTTGTACATACCGATGATTATGTC 57.411 34.615 0.00 0.00 39.24 3.06
4221 7074 8.826710 CAAAGTTGTACATACCGATGATTATGT 58.173 33.333 0.00 0.00 41.01 2.29
4222 7075 9.040939 TCAAAGTTGTACATACCGATGATTATG 57.959 33.333 0.00 0.00 36.48 1.90
4223 7076 9.042008 GTCAAAGTTGTACATACCGATGATTAT 57.958 33.333 0.00 0.00 36.48 1.28
4224 7077 7.221259 CGTCAAAGTTGTACATACCGATGATTA 59.779 37.037 0.00 0.00 36.48 1.75
4225 7078 6.035650 CGTCAAAGTTGTACATACCGATGATT 59.964 38.462 0.00 0.00 36.48 2.57
4226 7079 5.518847 CGTCAAAGTTGTACATACCGATGAT 59.481 40.000 0.00 0.00 36.48 2.45
4227 7080 4.860352 CGTCAAAGTTGTACATACCGATGA 59.140 41.667 0.00 1.28 36.48 2.92
4228 7081 4.860352 TCGTCAAAGTTGTACATACCGATG 59.140 41.667 0.00 0.00 39.16 3.84
4229 7082 5.063180 TCGTCAAAGTTGTACATACCGAT 57.937 39.130 0.00 0.00 0.00 4.18
4230 7083 4.502171 TCGTCAAAGTTGTACATACCGA 57.498 40.909 0.00 0.30 0.00 4.69
4231 7084 4.433805 GCTTCGTCAAAGTTGTACATACCG 60.434 45.833 0.00 0.00 37.31 4.02
4232 7085 4.449743 TGCTTCGTCAAAGTTGTACATACC 59.550 41.667 0.00 0.00 37.31 2.73
4233 7086 5.585500 TGCTTCGTCAAAGTTGTACATAC 57.415 39.130 0.00 0.00 37.31 2.39
4234 7087 7.465379 GCATATGCTTCGTCAAAGTTGTACATA 60.465 37.037 20.64 0.00 37.31 2.29
4235 7088 6.675486 GCATATGCTTCGTCAAAGTTGTACAT 60.675 38.462 20.64 0.00 37.31 2.29
4236 7089 5.390461 GCATATGCTTCGTCAAAGTTGTACA 60.390 40.000 20.64 0.00 37.31 2.90
4237 7090 5.022021 GCATATGCTTCGTCAAAGTTGTAC 58.978 41.667 20.64 0.00 37.31 2.90
4238 7091 5.216566 GCATATGCTTCGTCAAAGTTGTA 57.783 39.130 20.64 0.00 37.31 2.41
4239 7092 4.083581 GCATATGCTTCGTCAAAGTTGT 57.916 40.909 20.64 0.00 37.31 3.32
4254 7107 4.022676 TGAATGGTTGCATAGCAGCATATG 60.023 41.667 8.06 0.00 45.19 1.78
4272 7125 2.027745 CGGGGTAGAGGATCCATGAATG 60.028 54.545 15.82 0.00 33.66 2.67
4315 7171 4.268884 GCAAGACAAGAGTAACGATGATCC 59.731 45.833 0.00 0.00 0.00 3.36
4320 7176 2.230508 TCCGCAAGACAAGAGTAACGAT 59.769 45.455 0.00 0.00 43.02 3.73
4322 7178 2.060326 TCCGCAAGACAAGAGTAACG 57.940 50.000 0.00 0.00 43.02 3.18
4343 7199 9.893305 CTAAAAACGTCACTTTCTTTGGAATAT 57.107 29.630 0.00 0.00 0.00 1.28
4442 7320 7.285858 TCAAGATGAATCCATGCATGTGATTTA 59.714 33.333 28.69 26.40 32.02 1.40
4443 7321 6.097696 TCAAGATGAATCCATGCATGTGATTT 59.902 34.615 28.69 20.42 32.02 2.17
4456 7334 6.203723 CCCGAAATACTTCTCAAGATGAATCC 59.796 42.308 0.38 0.00 0.00 3.01
4458 7336 6.889198 TCCCGAAATACTTCTCAAGATGAAT 58.111 36.000 0.38 0.00 0.00 2.57
4479 7357 5.971202 CAGAACGCAACATAACAATATTCCC 59.029 40.000 0.00 0.00 0.00 3.97
4496 7374 2.025155 TCATCTCTCTACCCAGAACGC 58.975 52.381 0.00 0.00 0.00 4.84
4497 7375 4.720649 TTTCATCTCTCTACCCAGAACG 57.279 45.455 0.00 0.00 0.00 3.95
4521 7399 3.949113 GTCGTCTCCTACCTCTCTCATTT 59.051 47.826 0.00 0.00 0.00 2.32
4532 7410 2.439883 AGGGCGGTCGTCTCCTAC 60.440 66.667 0.00 0.00 0.00 3.18
4537 7415 2.282958 TCTTGAGGGCGGTCGTCT 60.283 61.111 3.81 0.00 0.00 4.18
4543 7421 0.250081 GCCTTATCTCTTGAGGGCGG 60.250 60.000 0.00 0.00 30.96 6.13
4546 7424 1.419387 CCCTGCCTTATCTCTTGAGGG 59.581 57.143 0.00 0.00 33.01 4.30
4580 7458 2.753966 CCATGCACCGCTTCCTTCG 61.754 63.158 0.00 0.00 0.00 3.79
4602 7480 2.653766 CGCCACGTGTTTTGGTGC 60.654 61.111 15.65 7.71 37.80 5.01
4619 7497 3.655276 TTTCTGGAACGTCACCTAGAC 57.345 47.619 11.91 0.00 44.02 2.59
4620 7498 3.830178 TGATTTCTGGAACGTCACCTAGA 59.170 43.478 11.91 10.01 0.00 2.43
4621 7499 4.188247 TGATTTCTGGAACGTCACCTAG 57.812 45.455 11.91 8.33 0.00 3.02
4623 7501 3.600388 GATGATTTCTGGAACGTCACCT 58.400 45.455 11.91 0.00 0.00 4.00
4624 7502 2.678336 GGATGATTTCTGGAACGTCACC 59.322 50.000 5.01 5.01 0.00 4.02
4625 7503 2.348666 CGGATGATTTCTGGAACGTCAC 59.651 50.000 0.00 0.00 0.00 3.67
4694 8075 6.442513 AGACTACAAAATATTGCTTCTGCC 57.557 37.500 0.00 0.00 40.34 4.85
4762 8143 4.856115 AAAACTTGTGGATTTTGTTGCG 57.144 36.364 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.