Multiple sequence alignment - TraesCS1A01G199500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G199500 chr1A 100.000 4739 0 0 1 4739 358180398 358175660 0.000000e+00 8752.0
1 TraesCS1A01G199500 chr1A 93.750 496 25 6 4246 4739 358152679 358152188 0.000000e+00 739.0
2 TraesCS1A01G199500 chr1B 93.448 2549 82 25 2219 4739 389092997 389090506 0.000000e+00 3703.0
3 TraesCS1A01G199500 chr1B 94.310 1283 48 10 859 2137 389094256 389092995 0.000000e+00 1941.0
4 TraesCS1A01G199500 chr1B 92.007 563 39 1 305 867 389096125 389095569 0.000000e+00 785.0
5 TraesCS1A01G199500 chr1B 92.838 377 24 3 4365 4739 389008669 389008294 1.160000e-150 544.0
6 TraesCS1A01G199500 chr1D 93.843 2209 66 22 2219 4396 286753237 286751068 0.000000e+00 3262.0
7 TraesCS1A01G199500 chr1D 95.870 1235 31 8 913 2137 286754459 286753235 0.000000e+00 1980.0
8 TraesCS1A01G199500 chr1D 96.667 240 8 0 4500 4739 286751013 286750774 2.660000e-107 399.0
9 TraesCS1A01G199500 chr1D 85.358 321 41 4 597 916 286755098 286754783 1.270000e-85 327.0
10 TraesCS1A01G199500 chr3A 92.079 303 24 0 1 303 595096866 595096564 1.220000e-115 427.0
11 TraesCS1A01G199500 chr7A 91.391 302 26 0 3 304 278750478 278750779 9.490000e-112 414.0
12 TraesCS1A01G199500 chr7A 90.604 298 28 0 1 298 278659767 278660064 3.440000e-106 396.0
13 TraesCS1A01G199500 chr7A 92.381 105 6 2 2124 2227 140110891 140110994 1.060000e-31 148.0
14 TraesCS1A01G199500 chr6D 91.639 299 24 1 1 298 292094383 292094681 3.410000e-111 412.0
15 TraesCS1A01G199500 chr6D 91.148 305 26 1 1 304 292131804 292132108 3.410000e-111 412.0
16 TraesCS1A01G199500 chr6D 93.750 96 6 0 2127 2222 136466299 136466394 1.370000e-30 145.0
17 TraesCS1A01G199500 chr6D 92.157 102 5 3 2125 2224 383526519 383526419 1.780000e-29 141.0
18 TraesCS1A01G199500 chr5D 90.820 305 27 1 1 304 355731939 355731635 1.590000e-109 407.0
19 TraesCS1A01G199500 chr5D 92.857 98 5 2 2124 2220 312853969 312854065 1.780000e-29 141.0
20 TraesCS1A01G199500 chr4A 91.275 298 24 2 1 298 15882663 15882958 5.710000e-109 405.0
21 TraesCS1A01G199500 chr4A 81.481 81 13 2 616 694 630861338 630861418 1.100000e-06 65.8
22 TraesCS1A01G199500 chr7D 90.492 305 28 1 1 304 492164625 492164929 7.390000e-108 401.0
23 TraesCS1A01G199500 chr6A 90.228 307 27 1 1 304 228733956 228733650 9.560000e-107 398.0
24 TraesCS1A01G199500 chr2A 93.684 95 5 1 2129 2223 715989495 715989402 1.780000e-29 141.0
25 TraesCS1A01G199500 chr4B 76.897 290 40 18 985 1249 640106789 640106502 6.390000e-29 139.0
26 TraesCS1A01G199500 chr4B 91.176 102 7 2 2135 2235 358445885 358445785 2.300000e-28 137.0
27 TraesCS1A01G199500 chr4B 85.950 121 15 2 2115 2234 403623038 403622919 1.380000e-25 128.0
28 TraesCS1A01G199500 chr3B 91.176 102 8 1 2124 2224 42629527 42629628 2.300000e-28 137.0
29 TraesCS1A01G199500 chr2B 90.196 102 7 3 2134 2233 54765993 54765893 3.850000e-26 130.0
30 TraesCS1A01G199500 chr6B 81.188 101 18 1 598 698 21357024 21357123 3.930000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G199500 chr1A 358175660 358180398 4738 True 8752 8752 100.0000 1 4739 1 chr1A.!!$R2 4738
1 TraesCS1A01G199500 chr1B 389090506 389096125 5619 True 2143 3703 93.2550 305 4739 3 chr1B.!!$R2 4434
2 TraesCS1A01G199500 chr1D 286750774 286755098 4324 True 1492 3262 92.9345 597 4739 4 chr1D.!!$R1 4142

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
181 182 0.036952 CTGGTCGAGTGGATTGCACT 60.037 55.000 10.90 10.9 35.30 4.40 F
399 400 0.037326 TCCCAACAAGCGCTACTCAG 60.037 55.000 12.05 0.0 0.00 3.35 F
611 612 0.458543 CACGAGGAAGGGTGATGACG 60.459 60.000 0.00 0.0 36.25 4.35 F
612 613 0.611062 ACGAGGAAGGGTGATGACGA 60.611 55.000 0.00 0.0 0.00 4.20 F
1082 2731 0.764890 CACCCCCATGTCCGTATCAT 59.235 55.000 0.00 0.0 0.00 2.45 F
1714 3379 1.071299 ACACAACATGAGCCGCAGA 59.929 52.632 0.00 0.0 0.00 4.26 F
1808 3473 1.206610 CACTCTGATGTGACCAGGGAG 59.793 57.143 0.00 0.0 40.12 4.30 F
2373 4041 1.363744 GCGAGAAGTGGTGATCTTGG 58.636 55.000 0.00 0.0 0.00 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1790 3455 0.177604 GCTCCCTGGTCACATCAGAG 59.822 60.000 0.00 0.0 34.36 3.35 R
2204 3872 0.971386 GTTGTACTCCCTCCGTTCCA 59.029 55.000 0.00 0.0 0.00 3.53 R
2404 4072 0.329261 AGCAATCACCCTAGCTGCAA 59.671 50.000 1.02 0.0 35.72 4.08 R
2638 4306 1.135094 CCATGTGCTCCCTATCACCT 58.865 55.000 0.00 0.0 32.51 4.00 R
2863 4541 2.160721 ATCCTTTCCCGCTAGTCTCA 57.839 50.000 0.00 0.0 0.00 3.27 R
3129 4814 3.128068 ACAGGGACGACAAAACAAGAAAC 59.872 43.478 0.00 0.0 0.00 2.78 R
3658 5343 4.141756 TGGATCCTGCAAAGCAAAAGAAAA 60.142 37.500 14.23 0.0 38.41 2.29 R
4352 6052 1.079819 CCGTCCATGTGAAGAGCGT 60.080 57.895 0.00 0.0 0.00 5.07 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 7.929941 GCTATAAAGAGCTATAAATGGCCTT 57.070 36.000 3.32 0.00 39.50 4.35
31 32 8.341892 GCTATAAAGAGCTATAAATGGCCTTT 57.658 34.615 3.32 0.00 39.50 3.11
32 33 9.449719 GCTATAAAGAGCTATAAATGGCCTTTA 57.550 33.333 3.32 16.48 39.14 1.85
34 35 6.641169 AAAGAGCTATAAATGGCCTTTAGC 57.359 37.500 14.02 14.02 35.11 3.09
35 36 5.310409 AGAGCTATAAATGGCCTTTAGCA 57.690 39.130 20.68 5.40 46.50 3.49
36 37 5.066593 AGAGCTATAAATGGCCTTTAGCAC 58.933 41.667 20.68 16.18 46.50 4.40
37 38 5.053978 AGCTATAAATGGCCTTTAGCACT 57.946 39.130 20.68 11.19 46.50 4.40
38 39 6.043243 AGAGCTATAAATGGCCTTTAGCACTA 59.957 38.462 20.68 5.17 46.50 2.74
39 40 5.998363 AGCTATAAATGGCCTTTAGCACTAC 59.002 40.000 20.68 3.96 46.50 2.73
40 41 5.107065 GCTATAAATGGCCTTTAGCACTACG 60.107 44.000 16.05 0.00 46.50 3.51
41 42 2.038387 AATGGCCTTTAGCACTACGG 57.962 50.000 3.32 0.00 46.50 4.02
42 43 1.200519 ATGGCCTTTAGCACTACGGA 58.799 50.000 3.32 0.00 46.50 4.69
43 44 0.535335 TGGCCTTTAGCACTACGGAG 59.465 55.000 3.32 0.00 46.50 4.63
44 45 0.535797 GGCCTTTAGCACTACGGAGT 59.464 55.000 0.00 0.00 46.50 3.85
52 53 4.092343 ACTACGGAGTGAACGCCT 57.908 55.556 0.00 0.00 45.73 5.52
53 54 1.585006 ACTACGGAGTGAACGCCTG 59.415 57.895 0.00 0.00 45.73 4.85
54 55 0.892358 ACTACGGAGTGAACGCCTGA 60.892 55.000 0.00 0.00 45.73 3.86
55 56 0.456312 CTACGGAGTGAACGCCTGAC 60.456 60.000 1.67 0.00 45.73 3.51
56 57 1.870055 TACGGAGTGAACGCCTGACC 61.870 60.000 1.67 0.00 45.73 4.02
57 58 2.432628 GGAGTGAACGCCTGACCG 60.433 66.667 0.00 0.00 32.72 4.79
58 59 2.338984 GAGTGAACGCCTGACCGT 59.661 61.111 0.00 0.00 44.41 4.83
67 68 4.003788 CCTGACCGTTGCCGTCCT 62.004 66.667 0.00 0.00 0.00 3.85
68 69 2.738521 CTGACCGTTGCCGTCCTG 60.739 66.667 0.00 0.00 0.00 3.86
69 70 3.220999 CTGACCGTTGCCGTCCTGA 62.221 63.158 0.00 0.00 0.00 3.86
70 71 2.432628 GACCGTTGCCGTCCTGAG 60.433 66.667 0.00 0.00 0.00 3.35
71 72 3.222354 GACCGTTGCCGTCCTGAGT 62.222 63.158 0.00 0.00 0.00 3.41
72 73 2.738521 CCGTTGCCGTCCTGAGTG 60.739 66.667 0.00 0.00 0.00 3.51
73 74 2.738521 CGTTGCCGTCCTGAGTGG 60.739 66.667 0.00 0.00 37.10 4.00
77 78 2.032681 GCCGTCCTGAGTGGCTTT 59.967 61.111 0.98 0.00 45.40 3.51
78 79 1.295423 GCCGTCCTGAGTGGCTTTA 59.705 57.895 0.98 0.00 45.40 1.85
79 80 0.741221 GCCGTCCTGAGTGGCTTTAG 60.741 60.000 0.98 0.00 45.40 1.85
80 81 0.895530 CCGTCCTGAGTGGCTTTAGA 59.104 55.000 0.00 0.00 35.26 2.10
81 82 1.404315 CCGTCCTGAGTGGCTTTAGAC 60.404 57.143 0.00 0.00 35.26 2.59
82 83 1.404315 CGTCCTGAGTGGCTTTAGACC 60.404 57.143 0.00 0.00 35.26 3.85
83 84 1.903183 GTCCTGAGTGGCTTTAGACCT 59.097 52.381 0.00 0.00 35.26 3.85
84 85 2.303311 GTCCTGAGTGGCTTTAGACCTT 59.697 50.000 0.00 0.00 35.26 3.50
85 86 2.567615 TCCTGAGTGGCTTTAGACCTTC 59.432 50.000 0.00 0.00 35.26 3.46
86 87 2.569404 CCTGAGTGGCTTTAGACCTTCT 59.431 50.000 0.00 0.00 0.00 2.85
87 88 3.594134 CTGAGTGGCTTTAGACCTTCTG 58.406 50.000 0.00 0.00 0.00 3.02
88 89 2.972713 TGAGTGGCTTTAGACCTTCTGT 59.027 45.455 0.00 0.00 0.00 3.41
89 90 3.391296 TGAGTGGCTTTAGACCTTCTGTT 59.609 43.478 0.00 0.00 0.00 3.16
90 91 3.997681 GAGTGGCTTTAGACCTTCTGTTC 59.002 47.826 0.00 0.00 0.00 3.18
91 92 3.648545 AGTGGCTTTAGACCTTCTGTTCT 59.351 43.478 0.00 0.00 0.00 3.01
92 93 4.103311 AGTGGCTTTAGACCTTCTGTTCTT 59.897 41.667 0.00 0.00 0.00 2.52
93 94 4.452795 GTGGCTTTAGACCTTCTGTTCTTC 59.547 45.833 0.00 0.00 0.00 2.87
94 95 3.680458 GGCTTTAGACCTTCTGTTCTTCG 59.320 47.826 0.00 0.00 0.00 3.79
95 96 4.557205 GCTTTAGACCTTCTGTTCTTCGA 58.443 43.478 0.00 0.00 0.00 3.71
96 97 4.623595 GCTTTAGACCTTCTGTTCTTCGAG 59.376 45.833 0.00 0.00 0.00 4.04
97 98 5.774630 CTTTAGACCTTCTGTTCTTCGAGT 58.225 41.667 0.00 0.00 0.00 4.18
98 99 3.651803 AGACCTTCTGTTCTTCGAGTG 57.348 47.619 0.00 0.00 0.00 3.51
99 100 3.223435 AGACCTTCTGTTCTTCGAGTGA 58.777 45.455 0.00 0.00 0.00 3.41
100 101 3.829601 AGACCTTCTGTTCTTCGAGTGAT 59.170 43.478 0.00 0.00 0.00 3.06
101 102 4.282195 AGACCTTCTGTTCTTCGAGTGATT 59.718 41.667 0.00 0.00 0.00 2.57
102 103 4.561105 ACCTTCTGTTCTTCGAGTGATTC 58.439 43.478 0.00 0.00 0.00 2.52
103 104 4.282195 ACCTTCTGTTCTTCGAGTGATTCT 59.718 41.667 0.00 0.00 0.00 2.40
104 105 5.221541 ACCTTCTGTTCTTCGAGTGATTCTT 60.222 40.000 0.00 0.00 0.00 2.52
105 106 5.347364 CCTTCTGTTCTTCGAGTGATTCTTC 59.653 44.000 0.00 0.00 0.00 2.87
106 107 4.476862 TCTGTTCTTCGAGTGATTCTTCG 58.523 43.478 5.23 5.23 0.00 3.79
107 108 4.023107 TCTGTTCTTCGAGTGATTCTTCGT 60.023 41.667 9.74 0.00 0.00 3.85
108 109 3.981416 TGTTCTTCGAGTGATTCTTCGTG 59.019 43.478 9.74 6.10 0.00 4.35
109 110 3.917329 TCTTCGAGTGATTCTTCGTGT 57.083 42.857 9.74 0.00 0.00 4.49
110 111 3.565516 TCTTCGAGTGATTCTTCGTGTG 58.434 45.455 9.74 4.17 0.00 3.82
111 112 2.347697 TCGAGTGATTCTTCGTGTGG 57.652 50.000 9.74 0.00 0.00 4.17
112 113 1.611977 TCGAGTGATTCTTCGTGTGGT 59.388 47.619 9.74 0.00 0.00 4.16
113 114 1.986378 CGAGTGATTCTTCGTGTGGTC 59.014 52.381 3.87 0.00 0.00 4.02
114 115 1.986378 GAGTGATTCTTCGTGTGGTCG 59.014 52.381 0.00 0.00 0.00 4.79
115 116 1.611977 AGTGATTCTTCGTGTGGTCGA 59.388 47.619 0.00 0.00 38.08 4.20
116 117 1.719780 GTGATTCTTCGTGTGGTCGAC 59.280 52.381 7.13 7.13 39.58 4.20
117 118 1.336517 TGATTCTTCGTGTGGTCGACC 60.337 52.381 28.17 28.17 39.58 4.79
118 119 0.388134 ATTCTTCGTGTGGTCGACCG 60.388 55.000 28.70 16.97 39.58 4.79
119 120 1.446516 TTCTTCGTGTGGTCGACCGA 61.447 55.000 28.70 19.00 39.58 4.69
120 121 1.728426 CTTCGTGTGGTCGACCGAC 60.728 63.158 28.70 24.54 43.87 4.79
121 122 2.126417 CTTCGTGTGGTCGACCGACT 62.126 60.000 28.70 0.00 44.04 4.18
122 123 2.121564 TTCGTGTGGTCGACCGACTC 62.122 60.000 28.70 23.44 44.04 3.36
123 124 2.614446 CGTGTGGTCGACCGACTCT 61.614 63.158 28.70 0.00 44.04 3.24
124 125 1.293963 CGTGTGGTCGACCGACTCTA 61.294 60.000 28.70 8.10 44.04 2.43
125 126 1.093159 GTGTGGTCGACCGACTCTAT 58.907 55.000 28.70 0.00 44.04 1.98
126 127 1.063764 GTGTGGTCGACCGACTCTATC 59.936 57.143 28.70 11.74 44.04 2.08
127 128 1.065636 TGTGGTCGACCGACTCTATCT 60.066 52.381 28.70 0.00 44.04 1.98
128 129 2.015587 GTGGTCGACCGACTCTATCTT 58.984 52.381 28.70 0.00 44.04 2.40
129 130 2.014857 TGGTCGACCGACTCTATCTTG 58.985 52.381 28.70 0.00 44.04 3.02
130 131 1.334243 GGTCGACCGACTCTATCTTGG 59.666 57.143 20.85 0.00 44.04 3.61
131 132 2.015587 GTCGACCGACTCTATCTTGGT 58.984 52.381 14.52 0.00 41.57 3.67
132 133 2.031930 GTCGACCGACTCTATCTTGGTC 59.968 54.545 14.52 0.00 44.43 4.02
139 140 4.920640 GACTCTATCTTGGTCGAATGGA 57.079 45.455 0.00 0.00 0.00 3.41
140 141 5.263968 GACTCTATCTTGGTCGAATGGAA 57.736 43.478 0.00 0.00 0.00 3.53
141 142 5.848406 GACTCTATCTTGGTCGAATGGAAT 58.152 41.667 0.00 0.00 0.00 3.01
142 143 6.240549 ACTCTATCTTGGTCGAATGGAATT 57.759 37.500 0.00 0.00 40.93 2.17
143 144 6.051717 ACTCTATCTTGGTCGAATGGAATTG 58.948 40.000 0.00 0.00 36.07 2.32
144 145 5.368145 TCTATCTTGGTCGAATGGAATTGG 58.632 41.667 0.00 0.00 36.07 3.16
145 146 2.722094 TCTTGGTCGAATGGAATTGGG 58.278 47.619 0.00 0.00 36.07 4.12
146 147 2.307392 TCTTGGTCGAATGGAATTGGGA 59.693 45.455 0.00 0.00 36.07 4.37
147 148 3.053693 TCTTGGTCGAATGGAATTGGGAT 60.054 43.478 0.00 0.00 36.07 3.85
148 149 4.165180 TCTTGGTCGAATGGAATTGGGATA 59.835 41.667 0.00 0.00 36.07 2.59
149 150 4.722526 TGGTCGAATGGAATTGGGATAT 57.277 40.909 0.00 0.00 36.07 1.63
150 151 4.651778 TGGTCGAATGGAATTGGGATATC 58.348 43.478 0.00 0.00 36.07 1.63
151 152 4.010349 GGTCGAATGGAATTGGGATATCC 58.990 47.826 13.87 13.87 36.07 2.59
152 153 3.684788 GTCGAATGGAATTGGGATATCCG 59.315 47.826 15.69 0.00 36.07 4.18
153 154 3.580895 TCGAATGGAATTGGGATATCCGA 59.419 43.478 15.69 9.20 36.07 4.55
154 155 4.041075 TCGAATGGAATTGGGATATCCGAA 59.959 41.667 20.03 20.03 36.07 4.30
155 156 4.943705 CGAATGGAATTGGGATATCCGAAT 59.056 41.667 22.44 22.44 44.72 3.34
156 157 5.163723 CGAATGGAATTGGGATATCCGAATG 60.164 44.000 26.97 12.66 42.50 2.67
157 158 4.032960 TGGAATTGGGATATCCGAATGG 57.967 45.455 26.97 0.00 42.50 3.16
158 159 5.222316 AATGGAATTGGGATATCCGAATGGA 60.222 40.000 26.97 16.45 42.50 3.41
159 160 6.526473 AATGGAATTGGGATATCCGAATGGAT 60.526 38.462 26.97 17.62 46.68 3.41
168 169 2.882927 TCCGAATGGATAACTGGTCG 57.117 50.000 0.00 0.00 40.17 4.79
169 170 2.380941 TCCGAATGGATAACTGGTCGA 58.619 47.619 0.00 0.00 40.17 4.20
170 171 2.361119 TCCGAATGGATAACTGGTCGAG 59.639 50.000 0.00 0.00 40.17 4.04
171 172 2.100916 CCGAATGGATAACTGGTCGAGT 59.899 50.000 0.00 0.00 37.49 4.18
172 173 3.116300 CGAATGGATAACTGGTCGAGTG 58.884 50.000 0.00 0.00 34.02 3.51
173 174 3.458189 GAATGGATAACTGGTCGAGTGG 58.542 50.000 0.00 0.00 34.02 4.00
174 175 2.225382 TGGATAACTGGTCGAGTGGA 57.775 50.000 0.00 0.00 34.02 4.02
175 176 2.747177 TGGATAACTGGTCGAGTGGAT 58.253 47.619 0.00 0.00 34.02 3.41
176 177 3.104512 TGGATAACTGGTCGAGTGGATT 58.895 45.455 0.00 0.00 34.02 3.01
177 178 3.118775 TGGATAACTGGTCGAGTGGATTG 60.119 47.826 0.00 0.00 34.02 2.67
178 179 2.380084 TAACTGGTCGAGTGGATTGC 57.620 50.000 0.00 0.00 34.02 3.56
179 180 0.396435 AACTGGTCGAGTGGATTGCA 59.604 50.000 0.00 0.00 34.02 4.08
180 181 0.320771 ACTGGTCGAGTGGATTGCAC 60.321 55.000 0.00 0.00 31.75 4.57
181 182 0.036952 CTGGTCGAGTGGATTGCACT 60.037 55.000 10.90 10.90 35.30 4.40
182 183 0.396435 TGGTCGAGTGGATTGCACTT 59.604 50.000 12.38 0.00 32.33 3.16
183 184 1.079503 GGTCGAGTGGATTGCACTTC 58.920 55.000 12.38 6.45 32.33 3.01
184 185 1.608025 GGTCGAGTGGATTGCACTTCA 60.608 52.381 12.38 0.00 32.33 3.02
185 186 2.143122 GTCGAGTGGATTGCACTTCAA 58.857 47.619 12.38 0.00 39.32 2.69
186 187 2.158449 GTCGAGTGGATTGCACTTCAAG 59.842 50.000 12.38 5.25 38.22 3.02
187 188 1.466167 CGAGTGGATTGCACTTCAAGG 59.534 52.381 12.38 0.00 38.22 3.61
188 189 2.508526 GAGTGGATTGCACTTCAAGGT 58.491 47.619 12.38 0.00 38.22 3.50
189 190 2.227388 GAGTGGATTGCACTTCAAGGTG 59.773 50.000 12.38 0.00 38.22 4.00
190 191 1.956477 GTGGATTGCACTTCAAGGTGT 59.044 47.619 0.45 0.00 38.22 4.16
191 192 2.362077 GTGGATTGCACTTCAAGGTGTT 59.638 45.455 0.45 0.00 38.22 3.32
192 193 3.030291 TGGATTGCACTTCAAGGTGTTT 58.970 40.909 0.00 0.00 38.22 2.83
193 194 3.450457 TGGATTGCACTTCAAGGTGTTTT 59.550 39.130 0.00 0.00 38.22 2.43
194 195 4.051237 GGATTGCACTTCAAGGTGTTTTC 58.949 43.478 0.00 0.00 38.22 2.29
195 196 4.441356 GGATTGCACTTCAAGGTGTTTTCA 60.441 41.667 0.00 0.00 38.22 2.69
196 197 3.781079 TGCACTTCAAGGTGTTTTCAG 57.219 42.857 0.00 0.00 39.21 3.02
197 198 3.088532 TGCACTTCAAGGTGTTTTCAGT 58.911 40.909 0.00 0.00 39.21 3.41
198 199 3.128589 TGCACTTCAAGGTGTTTTCAGTC 59.871 43.478 0.00 0.00 39.21 3.51
199 200 3.788797 GCACTTCAAGGTGTTTTCAGTCG 60.789 47.826 0.00 0.00 39.21 4.18
200 201 2.943033 ACTTCAAGGTGTTTTCAGTCGG 59.057 45.455 0.00 0.00 0.00 4.79
201 202 1.305201 TCAAGGTGTTTTCAGTCGGC 58.695 50.000 0.00 0.00 0.00 5.54
202 203 1.021202 CAAGGTGTTTTCAGTCGGCA 58.979 50.000 0.00 0.00 0.00 5.69
203 204 1.608590 CAAGGTGTTTTCAGTCGGCAT 59.391 47.619 0.00 0.00 0.00 4.40
204 205 1.523758 AGGTGTTTTCAGTCGGCATC 58.476 50.000 0.00 0.00 0.00 3.91
205 206 1.072331 AGGTGTTTTCAGTCGGCATCT 59.928 47.619 0.00 0.00 0.00 2.90
206 207 1.880027 GGTGTTTTCAGTCGGCATCTT 59.120 47.619 0.00 0.00 0.00 2.40
207 208 2.095718 GGTGTTTTCAGTCGGCATCTTC 60.096 50.000 0.00 0.00 0.00 2.87
208 209 2.808543 GTGTTTTCAGTCGGCATCTTCT 59.191 45.455 0.00 0.00 0.00 2.85
209 210 2.807967 TGTTTTCAGTCGGCATCTTCTG 59.192 45.455 0.00 0.00 0.00 3.02
210 211 2.808543 GTTTTCAGTCGGCATCTTCTGT 59.191 45.455 0.00 0.00 0.00 3.41
211 212 2.839486 TTCAGTCGGCATCTTCTGTT 57.161 45.000 0.00 0.00 0.00 3.16
212 213 2.084610 TCAGTCGGCATCTTCTGTTG 57.915 50.000 0.00 0.00 0.00 3.33
213 214 1.344438 TCAGTCGGCATCTTCTGTTGT 59.656 47.619 0.00 0.00 0.00 3.32
214 215 1.728971 CAGTCGGCATCTTCTGTTGTC 59.271 52.381 0.00 0.00 0.00 3.18
215 216 1.079503 GTCGGCATCTTCTGTTGTCC 58.920 55.000 0.00 0.00 0.00 4.02
216 217 0.976641 TCGGCATCTTCTGTTGTCCT 59.023 50.000 0.00 0.00 0.00 3.85
217 218 1.347707 TCGGCATCTTCTGTTGTCCTT 59.652 47.619 0.00 0.00 0.00 3.36
218 219 2.154462 CGGCATCTTCTGTTGTCCTTT 58.846 47.619 0.00 0.00 0.00 3.11
219 220 2.095567 CGGCATCTTCTGTTGTCCTTTG 60.096 50.000 0.00 0.00 0.00 2.77
220 221 3.149196 GGCATCTTCTGTTGTCCTTTGA 58.851 45.455 0.00 0.00 0.00 2.69
221 222 3.190118 GGCATCTTCTGTTGTCCTTTGAG 59.810 47.826 0.00 0.00 0.00 3.02
222 223 3.817647 GCATCTTCTGTTGTCCTTTGAGT 59.182 43.478 0.00 0.00 0.00 3.41
223 224 4.320057 GCATCTTCTGTTGTCCTTTGAGTG 60.320 45.833 0.00 0.00 0.00 3.51
224 225 4.487714 TCTTCTGTTGTCCTTTGAGTGT 57.512 40.909 0.00 0.00 0.00 3.55
225 226 4.442706 TCTTCTGTTGTCCTTTGAGTGTC 58.557 43.478 0.00 0.00 0.00 3.67
226 227 4.162320 TCTTCTGTTGTCCTTTGAGTGTCT 59.838 41.667 0.00 0.00 0.00 3.41
227 228 4.487714 TCTGTTGTCCTTTGAGTGTCTT 57.512 40.909 0.00 0.00 0.00 3.01
228 229 4.843728 TCTGTTGTCCTTTGAGTGTCTTT 58.156 39.130 0.00 0.00 0.00 2.52
229 230 4.635765 TCTGTTGTCCTTTGAGTGTCTTTG 59.364 41.667 0.00 0.00 0.00 2.77
230 231 4.584874 TGTTGTCCTTTGAGTGTCTTTGA 58.415 39.130 0.00 0.00 0.00 2.69
231 232 4.394920 TGTTGTCCTTTGAGTGTCTTTGAC 59.605 41.667 0.00 0.00 0.00 3.18
232 233 4.487714 TGTCCTTTGAGTGTCTTTGACT 57.512 40.909 0.00 0.00 33.15 3.41
233 234 4.442706 TGTCCTTTGAGTGTCTTTGACTC 58.557 43.478 0.00 0.00 40.34 3.36
234 235 4.162320 TGTCCTTTGAGTGTCTTTGACTCT 59.838 41.667 0.00 2.50 40.54 3.24
235 236 5.362717 TGTCCTTTGAGTGTCTTTGACTCTA 59.637 40.000 0.00 0.00 40.54 2.43
236 237 5.923684 GTCCTTTGAGTGTCTTTGACTCTAG 59.076 44.000 0.00 0.00 40.54 2.43
237 238 5.011125 TCCTTTGAGTGTCTTTGACTCTAGG 59.989 44.000 0.00 0.00 40.54 3.02
238 239 4.873746 TTGAGTGTCTTTGACTCTAGGG 57.126 45.455 0.00 0.00 40.54 3.53
239 240 2.563179 TGAGTGTCTTTGACTCTAGGGC 59.437 50.000 0.00 0.00 40.54 5.19
240 241 2.563179 GAGTGTCTTTGACTCTAGGGCA 59.437 50.000 0.00 0.00 36.68 5.36
241 242 2.564947 AGTGTCTTTGACTCTAGGGCAG 59.435 50.000 0.00 0.00 35.12 4.85
242 243 2.300437 GTGTCTTTGACTCTAGGGCAGT 59.700 50.000 0.00 0.00 32.68 4.40
243 244 2.300152 TGTCTTTGACTCTAGGGCAGTG 59.700 50.000 0.00 0.00 32.68 3.66
244 245 2.300437 GTCTTTGACTCTAGGGCAGTGT 59.700 50.000 0.00 0.00 32.68 3.55
245 246 2.563179 TCTTTGACTCTAGGGCAGTGTC 59.437 50.000 0.00 0.00 44.53 3.67
246 247 1.267121 TTGACTCTAGGGCAGTGTCC 58.733 55.000 5.33 5.33 43.94 4.02
247 248 0.409876 TGACTCTAGGGCAGTGTCCT 59.590 55.000 22.32 22.32 43.94 3.85
248 249 1.203187 TGACTCTAGGGCAGTGTCCTT 60.203 52.381 24.02 2.80 43.94 3.36
249 250 1.205893 GACTCTAGGGCAGTGTCCTTG 59.794 57.143 24.02 20.64 39.09 3.61
250 251 0.539051 CTCTAGGGCAGTGTCCTTGG 59.461 60.000 24.02 15.30 39.09 3.61
251 252 0.909610 TCTAGGGCAGTGTCCTTGGG 60.910 60.000 24.02 12.73 39.09 4.12
252 253 1.151899 TAGGGCAGTGTCCTTGGGT 60.152 57.895 24.02 0.00 39.09 4.51
253 254 0.117541 TAGGGCAGTGTCCTTGGGTA 59.882 55.000 24.02 0.00 39.09 3.69
254 255 1.002502 GGGCAGTGTCCTTGGGTAC 60.003 63.158 6.49 0.00 0.00 3.34
255 256 1.375523 GGCAGTGTCCTTGGGTACG 60.376 63.158 0.00 0.00 0.00 3.67
256 257 1.669440 GCAGTGTCCTTGGGTACGA 59.331 57.895 0.00 0.00 0.00 3.43
257 258 0.669625 GCAGTGTCCTTGGGTACGAC 60.670 60.000 0.00 0.00 0.00 4.34
258 259 0.388134 CAGTGTCCTTGGGTACGACG 60.388 60.000 0.00 0.00 0.00 5.12
259 260 0.825010 AGTGTCCTTGGGTACGACGT 60.825 55.000 5.52 5.52 0.00 4.34
260 261 0.387750 GTGTCCTTGGGTACGACGTC 60.388 60.000 2.43 5.18 0.00 4.34
261 262 0.538057 TGTCCTTGGGTACGACGTCT 60.538 55.000 14.70 3.37 0.00 4.18
262 263 1.271325 TGTCCTTGGGTACGACGTCTA 60.271 52.381 14.70 2.35 0.00 2.59
263 264 1.399791 GTCCTTGGGTACGACGTCTAG 59.600 57.143 14.70 0.96 0.00 2.43
264 265 0.737219 CCTTGGGTACGACGTCTAGG 59.263 60.000 14.70 2.34 0.00 3.02
265 266 1.457346 CTTGGGTACGACGTCTAGGT 58.543 55.000 14.70 6.90 0.00 3.08
266 267 1.399791 CTTGGGTACGACGTCTAGGTC 59.600 57.143 14.70 1.27 0.00 3.85
267 268 0.324614 TGGGTACGACGTCTAGGTCA 59.675 55.000 14.70 3.96 36.73 4.02
268 269 1.012841 GGGTACGACGTCTAGGTCAG 58.987 60.000 14.70 0.00 36.73 3.51
269 270 1.012841 GGTACGACGTCTAGGTCAGG 58.987 60.000 14.70 0.00 36.73 3.86
270 271 0.376502 GTACGACGTCTAGGTCAGGC 59.623 60.000 14.70 0.00 36.73 4.85
271 272 0.745845 TACGACGTCTAGGTCAGGCC 60.746 60.000 14.70 0.00 36.73 5.19
283 284 1.049402 GTCAGGCCTATGACCCTACC 58.951 60.000 3.98 0.00 43.12 3.18
284 285 0.105142 TCAGGCCTATGACCCTACCC 60.105 60.000 3.98 0.00 0.00 3.69
285 286 0.104934 CAGGCCTATGACCCTACCCT 60.105 60.000 3.98 0.00 0.00 4.34
286 287 1.149288 CAGGCCTATGACCCTACCCTA 59.851 57.143 3.98 0.00 0.00 3.53
287 288 1.433592 AGGCCTATGACCCTACCCTAG 59.566 57.143 1.29 0.00 0.00 3.02
288 289 1.552719 GGCCTATGACCCTACCCTAGG 60.553 61.905 0.06 0.06 45.81 3.02
289 290 1.149500 GCCTATGACCCTACCCTAGGT 59.851 57.143 8.29 0.00 44.73 3.08
290 291 2.381275 GCCTATGACCCTACCCTAGGTA 59.619 54.545 8.29 0.00 44.73 3.08
291 292 3.817205 GCCTATGACCCTACCCTAGGTAC 60.817 56.522 8.29 0.00 44.73 3.34
292 293 3.400322 CCTATGACCCTACCCTAGGTACA 59.600 52.174 8.29 0.00 44.73 2.90
293 294 4.045590 CCTATGACCCTACCCTAGGTACAT 59.954 50.000 8.29 5.18 44.73 2.29
294 295 3.323774 TGACCCTACCCTAGGTACATG 57.676 52.381 8.29 0.00 44.73 3.21
295 296 2.588720 TGACCCTACCCTAGGTACATGT 59.411 50.000 8.29 2.69 44.73 3.21
296 297 3.229293 GACCCTACCCTAGGTACATGTC 58.771 54.545 8.29 5.23 44.73 3.06
297 298 2.588720 ACCCTACCCTAGGTACATGTCA 59.411 50.000 8.29 0.00 44.73 3.58
298 299 2.963782 CCCTACCCTAGGTACATGTCAC 59.036 54.545 8.29 0.00 44.73 3.67
299 300 2.963782 CCTACCCTAGGTACATGTCACC 59.036 54.545 8.29 8.94 41.18 4.02
300 301 1.481871 ACCCTAGGTACATGTCACCG 58.518 55.000 8.29 0.00 41.21 4.94
301 302 1.272872 ACCCTAGGTACATGTCACCGT 60.273 52.381 8.29 0.00 41.21 4.83
302 303 1.407979 CCCTAGGTACATGTCACCGTC 59.592 57.143 8.29 0.00 41.21 4.79
303 304 2.097036 CCTAGGTACATGTCACCGTCA 58.903 52.381 0.00 0.03 41.21 4.35
311 312 3.552384 GTCACCGTCACCCCACCA 61.552 66.667 0.00 0.00 0.00 4.17
312 313 3.552384 TCACCGTCACCCCACCAC 61.552 66.667 0.00 0.00 0.00 4.16
320 321 2.039831 ACCCCACCACCTGACAGT 60.040 61.111 0.93 0.00 0.00 3.55
322 323 0.178873 ACCCCACCACCTGACAGTAT 60.179 55.000 0.93 0.00 0.00 2.12
399 400 0.037326 TCCCAACAAGCGCTACTCAG 60.037 55.000 12.05 0.00 0.00 3.35
402 403 0.671781 CAACAAGCGCTACTCAGGCT 60.672 55.000 12.05 0.00 39.01 4.58
439 440 4.013050 ACGAGTAGGGTTAAGTAGGTGTC 58.987 47.826 0.00 0.00 0.00 3.67
478 479 4.223953 AGGTGTGGAGAAACTGAACTCTA 58.776 43.478 0.00 0.00 34.11 2.43
484 485 6.049790 GTGGAGAAACTGAACTCTAAACAGT 58.950 40.000 0.00 0.00 45.02 3.55
487 488 5.990668 AGAAACTGAACTCTAAACAGTGGT 58.009 37.500 0.00 0.00 42.81 4.16
488 489 7.120923 AGAAACTGAACTCTAAACAGTGGTA 57.879 36.000 0.00 0.00 42.81 3.25
489 490 7.736893 AGAAACTGAACTCTAAACAGTGGTAT 58.263 34.615 0.00 0.00 42.81 2.73
500 501 7.406916 TCTAAACAGTGGTATCTCTCTTCTCT 58.593 38.462 0.00 0.00 0.00 3.10
516 517 6.673978 TCTCTTCTCTGATTCCCCATTTCTTA 59.326 38.462 0.00 0.00 0.00 2.10
538 539 5.390087 ACTCTAGAACCCTAGTATCTGCA 57.610 43.478 0.00 0.00 42.33 4.41
553 554 3.394674 TCTGCAACAAACTCCGTATCA 57.605 42.857 0.00 0.00 0.00 2.15
555 556 3.684305 TCTGCAACAAACTCCGTATCATG 59.316 43.478 0.00 0.00 0.00 3.07
611 612 0.458543 CACGAGGAAGGGTGATGACG 60.459 60.000 0.00 0.00 36.25 4.35
612 613 0.611062 ACGAGGAAGGGTGATGACGA 60.611 55.000 0.00 0.00 0.00 4.20
645 646 2.927477 CGGCTCGTTTCAGTGCTTATAA 59.073 45.455 0.00 0.00 0.00 0.98
650 651 5.220416 GCTCGTTTCAGTGCTTATAATCGTT 60.220 40.000 0.00 0.00 0.00 3.85
656 657 4.745125 TCAGTGCTTATAATCGTTGCTAGC 59.255 41.667 8.10 8.10 0.00 3.42
785 786 3.807622 TCTTCAAATATAAGGAAGGCGCG 59.192 43.478 0.00 0.00 38.78 6.86
816 817 3.577313 GCGGGCGGCTGAGATTTC 61.577 66.667 23.83 0.00 39.11 2.17
817 818 2.187946 CGGGCGGCTGAGATTTCT 59.812 61.111 13.52 0.00 0.00 2.52
826 827 1.742268 GCTGAGATTTCTGGAGCAACC 59.258 52.381 0.00 0.00 39.54 3.77
878 2200 7.147828 GGGAGAAAAGATATTTCCCTGGAAAAG 60.148 40.741 14.88 0.00 45.60 2.27
880 2202 8.956446 AGAAAAGATATTTCCCTGGAAAAGAA 57.044 30.769 14.88 5.09 45.60 2.52
882 2204 9.996554 GAAAAGATATTTCCCTGGAAAAGAAAA 57.003 29.630 14.88 0.67 45.60 2.29
885 2207 8.956446 AGATATTTCCCTGGAAAAGAAAAGAA 57.044 30.769 14.88 0.00 45.60 2.52
886 2208 9.029368 AGATATTTCCCTGGAAAAGAAAAGAAG 57.971 33.333 14.88 0.00 45.60 2.85
1082 2731 0.764890 CACCCCCATGTCCGTATCAT 59.235 55.000 0.00 0.00 0.00 2.45
1258 2907 3.319018 AGGGGGTAAGTACCTGAGC 57.681 57.895 7.43 0.00 45.72 4.26
1264 2913 2.347731 GGTAAGTACCTGAGCAACTGC 58.652 52.381 0.00 0.00 43.10 4.40
1327 2992 2.426842 AAGGGCCTGTCTTTGATAGC 57.573 50.000 6.92 0.00 0.00 2.97
1334 2999 4.865365 GGCCTGTCTTTGATAGCGATATAC 59.135 45.833 0.00 0.00 0.00 1.47
1336 3001 5.802956 GCCTGTCTTTGATAGCGATATACTC 59.197 44.000 0.00 0.00 0.00 2.59
1339 3004 5.472478 TGTCTTTGATAGCGATATACTCCGT 59.528 40.000 0.00 0.00 0.00 4.69
1341 3006 7.336176 TGTCTTTGATAGCGATATACTCCGTAT 59.664 37.037 0.00 0.00 33.05 3.06
1343 3008 8.182227 TCTTTGATAGCGATATACTCCGTATTG 58.818 37.037 0.00 0.00 30.79 1.90
1344 3009 5.817988 TGATAGCGATATACTCCGTATTGC 58.182 41.667 0.00 0.00 38.62 3.56
1345 3010 3.132629 AGCGATATACTCCGTATTGCG 57.867 47.619 0.00 0.00 41.66 4.85
1346 3011 1.582502 GCGATATACTCCGTATTGCGC 59.417 52.381 0.00 0.00 39.99 6.09
1347 3012 2.858839 CGATATACTCCGTATTGCGCA 58.141 47.619 5.66 5.66 39.71 6.09
1348 3013 3.239254 CGATATACTCCGTATTGCGCAA 58.761 45.455 27.24 27.24 39.71 4.85
1349 3014 3.857665 CGATATACTCCGTATTGCGCAAT 59.142 43.478 35.42 35.42 39.71 3.56
1350 3015 4.326278 CGATATACTCCGTATTGCGCAATT 59.674 41.667 37.79 22.31 39.71 2.32
1528 3193 5.845985 ACTGTGATGTTATTCGTGACAAG 57.154 39.130 0.00 0.00 29.63 3.16
1556 3221 3.238108 TCTTCAGTTCTTCCTCATCGC 57.762 47.619 0.00 0.00 0.00 4.58
1597 3262 6.722129 ACCTAGGAGCTATAGAACTAATGTGG 59.278 42.308 17.98 2.94 0.00 4.17
1710 3375 1.333308 TGAAACACACAACATGAGCCG 59.667 47.619 0.00 0.00 0.00 5.52
1714 3379 1.071299 ACACAACATGAGCCGCAGA 59.929 52.632 0.00 0.00 0.00 4.26
1763 3428 4.284490 TGGCCACATGAGGATAGATACTTC 59.716 45.833 13.99 0.00 0.00 3.01
1790 3455 1.883926 ACACGATTTGCCTTTACCCAC 59.116 47.619 0.00 0.00 0.00 4.61
1808 3473 1.206610 CACTCTGATGTGACCAGGGAG 59.793 57.143 0.00 0.00 40.12 4.30
2068 3736 3.732471 GCTCAGCTAGACGTTTCTGTAGG 60.732 52.174 0.00 0.00 32.75 3.18
2097 3765 1.741993 CTCAAAAACGCGTCTGTTGG 58.258 50.000 14.44 5.20 31.10 3.77
2147 3815 5.017294 GCTATATGCTACTCCCTCCATTC 57.983 47.826 0.00 0.00 38.95 2.67
2148 3816 4.141824 GCTATATGCTACTCCCTCCATTCC 60.142 50.000 0.00 0.00 38.95 3.01
2149 3817 2.196742 ATGCTACTCCCTCCATTCCA 57.803 50.000 0.00 0.00 0.00 3.53
2150 3818 1.965414 TGCTACTCCCTCCATTCCAA 58.035 50.000 0.00 0.00 0.00 3.53
2151 3819 2.274542 TGCTACTCCCTCCATTCCAAA 58.725 47.619 0.00 0.00 0.00 3.28
2152 3820 2.647299 TGCTACTCCCTCCATTCCAAAA 59.353 45.455 0.00 0.00 0.00 2.44
2153 3821 3.269381 TGCTACTCCCTCCATTCCAAAAT 59.731 43.478 0.00 0.00 0.00 1.82
2154 3822 4.476846 TGCTACTCCCTCCATTCCAAAATA 59.523 41.667 0.00 0.00 0.00 1.40
2155 3823 5.066593 GCTACTCCCTCCATTCCAAAATAG 58.933 45.833 0.00 0.00 0.00 1.73
2156 3824 5.163195 GCTACTCCCTCCATTCCAAAATAGA 60.163 44.000 0.00 0.00 0.00 1.98
2157 3825 6.466470 GCTACTCCCTCCATTCCAAAATAGAT 60.466 42.308 0.00 0.00 0.00 1.98
2158 3826 5.699143 ACTCCCTCCATTCCAAAATAGATG 58.301 41.667 0.00 0.00 0.00 2.90
2159 3827 5.433051 ACTCCCTCCATTCCAAAATAGATGA 59.567 40.000 0.00 0.00 0.00 2.92
2160 3828 5.694995 TCCCTCCATTCCAAAATAGATGAC 58.305 41.667 0.00 0.00 0.00 3.06
2161 3829 5.433051 TCCCTCCATTCCAAAATAGATGACT 59.567 40.000 0.00 0.00 0.00 3.41
2162 3830 5.767168 CCCTCCATTCCAAAATAGATGACTC 59.233 44.000 0.00 0.00 0.00 3.36
2163 3831 6.359804 CCTCCATTCCAAAATAGATGACTCA 58.640 40.000 0.00 0.00 0.00 3.41
2164 3832 6.830324 CCTCCATTCCAAAATAGATGACTCAA 59.170 38.462 0.00 0.00 0.00 3.02
2165 3833 7.201767 CCTCCATTCCAAAATAGATGACTCAAC 60.202 40.741 0.00 0.00 0.00 3.18
2166 3834 7.405292 TCCATTCCAAAATAGATGACTCAACT 58.595 34.615 0.00 0.00 0.00 3.16
2167 3835 7.890127 TCCATTCCAAAATAGATGACTCAACTT 59.110 33.333 0.00 0.00 0.00 2.66
2168 3836 8.526147 CCATTCCAAAATAGATGACTCAACTTT 58.474 33.333 0.00 0.00 0.00 2.66
2196 3864 8.943594 ACTAAACTTGGTATAAAATTGGGTCA 57.056 30.769 0.00 0.00 0.00 4.02
2197 3865 9.541884 ACTAAACTTGGTATAAAATTGGGTCAT 57.458 29.630 0.00 0.00 0.00 3.06
2199 3867 8.664669 AAACTTGGTATAAAATTGGGTCATCT 57.335 30.769 0.00 0.00 0.00 2.90
2200 3868 9.762381 AAACTTGGTATAAAATTGGGTCATCTA 57.238 29.630 0.00 0.00 0.00 1.98
2201 3869 9.936329 AACTTGGTATAAAATTGGGTCATCTAT 57.064 29.630 0.00 0.00 0.00 1.98
2202 3870 9.936329 ACTTGGTATAAAATTGGGTCATCTATT 57.064 29.630 0.00 0.00 0.00 1.73
2206 3874 9.981114 GGTATAAAATTGGGTCATCTATTTTGG 57.019 33.333 0.00 0.00 33.59 3.28
2210 3878 5.835113 ATTGGGTCATCTATTTTGGAACG 57.165 39.130 0.00 0.00 0.00 3.95
2211 3879 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
2212 3880 3.264706 TGGGTCATCTATTTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
2213 3881 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
2214 3882 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
2215 3883 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
2216 3884 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
2217 3885 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
2218 3886 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
2219 3887 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
2220 3888 2.845363 TTTTGGAACGGAGGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
2221 3889 1.719529 TTTGGAACGGAGGGAGTACA 58.280 50.000 0.00 0.00 0.00 2.90
2222 3890 1.719529 TTGGAACGGAGGGAGTACAA 58.280 50.000 0.00 0.00 0.00 2.41
2373 4041 1.363744 GCGAGAAGTGGTGATCTTGG 58.636 55.000 0.00 0.00 0.00 3.61
2404 4072 1.741770 GCCGCGTGAGACCAGAATT 60.742 57.895 4.92 0.00 0.00 2.17
2637 4305 5.075493 AGTTTTCAGGAAGCTCATCACATT 58.925 37.500 0.00 0.00 0.00 2.71
2638 4306 6.240894 AGTTTTCAGGAAGCTCATCACATTA 58.759 36.000 0.00 0.00 0.00 1.90
2671 4339 2.224257 GCACATGGTGTTGTTTGGGATT 60.224 45.455 0.00 0.00 35.75 3.01
2954 4632 6.264970 AGGAGTAGGACGGAATTTCTGTATAC 59.735 42.308 10.82 15.06 35.83 1.47
3129 4814 7.783090 ACTCATTGCTCACTTTGTATATCTG 57.217 36.000 0.00 0.00 0.00 2.90
3579 5264 9.331282 CACCTCTTTATCCAGGTTAGAATTAAG 57.669 37.037 0.00 0.00 41.41 1.85
3635 5320 7.067859 CCTTCAGTATCATCCATTCACATTGTT 59.932 37.037 0.00 0.00 0.00 2.83
3636 5321 7.943079 TCAGTATCATCCATTCACATTGTTT 57.057 32.000 0.00 0.00 0.00 2.83
3637 5322 8.352137 TCAGTATCATCCATTCACATTGTTTT 57.648 30.769 0.00 0.00 0.00 2.43
3638 5323 8.805175 TCAGTATCATCCATTCACATTGTTTTT 58.195 29.630 0.00 0.00 0.00 1.94
3746 5431 1.918262 TGCTCTGGTTTGAGGATCCAT 59.082 47.619 15.82 0.00 34.82 3.41
3792 5478 4.079253 ACCGCACCTGAAAATATGAAGTT 58.921 39.130 0.00 0.00 0.00 2.66
3956 5642 4.635223 TGACTCCTTGATTGTGTCTTCTG 58.365 43.478 0.00 0.00 0.00 3.02
3957 5643 4.101585 TGACTCCTTGATTGTGTCTTCTGT 59.898 41.667 0.00 0.00 0.00 3.41
3958 5644 5.041191 ACTCCTTGATTGTGTCTTCTGTT 57.959 39.130 0.00 0.00 0.00 3.16
3959 5645 4.818546 ACTCCTTGATTGTGTCTTCTGTTG 59.181 41.667 0.00 0.00 0.00 3.33
3960 5646 5.034852 TCCTTGATTGTGTCTTCTGTTGA 57.965 39.130 0.00 0.00 0.00 3.18
4010 5701 9.414295 TCTTCAAAAATAATTTGATGTGAGCAG 57.586 29.630 13.22 4.42 38.12 4.24
4011 5702 9.199982 CTTCAAAAATAATTTGATGTGAGCAGT 57.800 29.630 4.62 0.00 38.12 4.40
4013 5704 9.844790 TCAAAAATAATTTGATGTGAGCAGTAG 57.155 29.630 0.00 0.00 33.90 2.57
4046 5737 6.961360 AAAAGAAGAGGTAAAAGAAGTGGG 57.039 37.500 0.00 0.00 0.00 4.61
4070 5761 1.244816 GCAACCCAGTTGAACCCTAC 58.755 55.000 11.50 0.00 45.28 3.18
4244 5942 0.322277 CAGCCACCTCTGATTGCACT 60.322 55.000 0.00 0.00 36.19 4.40
4296 5995 5.002464 AGGCACAATACAATCTGCAAATC 57.998 39.130 0.00 0.00 0.00 2.17
4315 6014 5.627499 AATCTTTTGCTTTGATCGTGCTA 57.373 34.783 6.09 0.00 0.00 3.49
4329 6029 3.381045 TCGTGCTACAGAGTTTTCACTG 58.619 45.455 0.00 0.00 42.66 3.66
4333 6033 4.752101 GTGCTACAGAGTTTTCACTGTCAT 59.248 41.667 0.00 0.00 45.76 3.06
4339 6039 4.211164 CAGAGTTTTCACTGTCATTGCGTA 59.789 41.667 0.00 0.00 34.61 4.42
4352 6052 2.030862 GCGTACGTCAAACCCCCA 59.969 61.111 17.90 0.00 0.00 4.96
4355 6055 2.030862 TACGTCAAACCCCCACGC 59.969 61.111 0.00 0.00 37.02 5.34
4356 6056 2.509651 TACGTCAAACCCCCACGCT 61.510 57.895 0.00 0.00 37.02 5.07
4357 6057 2.438951 TACGTCAAACCCCCACGCTC 62.439 60.000 0.00 0.00 37.02 5.03
4369 6069 1.354337 CCACGCTCTTCACATGGACG 61.354 60.000 0.00 0.00 31.69 4.79
4371 6071 2.456119 CGCTCTTCACATGGACGGC 61.456 63.158 0.00 0.00 0.00 5.68
4396 6096 2.707849 GCGCGACAGGGTCCTAGAA 61.708 63.158 12.10 0.00 0.00 2.10
4397 6097 1.888018 CGCGACAGGGTCCTAGAAA 59.112 57.895 0.00 0.00 0.00 2.52
4398 6098 0.460311 CGCGACAGGGTCCTAGAAAT 59.540 55.000 0.00 0.00 0.00 2.17
4399 6099 1.679680 CGCGACAGGGTCCTAGAAATA 59.320 52.381 0.00 0.00 0.00 1.40
4400 6100 2.100252 CGCGACAGGGTCCTAGAAATAA 59.900 50.000 0.00 0.00 0.00 1.40
4401 6101 3.455327 GCGACAGGGTCCTAGAAATAAC 58.545 50.000 0.00 0.00 0.00 1.89
4402 6102 3.132467 GCGACAGGGTCCTAGAAATAACT 59.868 47.826 0.00 0.00 0.00 2.24
4407 6107 7.086685 ACAGGGTCCTAGAAATAACTGAAAA 57.913 36.000 0.00 0.00 0.00 2.29
4412 6112 9.901172 GGGTCCTAGAAATAACTGAAAATAAGA 57.099 33.333 0.00 0.00 0.00 2.10
4429 6129 7.694388 AAATAAGAAAGGAAGCAACGAAAAC 57.306 32.000 0.00 0.00 0.00 2.43
4430 6130 3.334272 AGAAAGGAAGCAACGAAAACG 57.666 42.857 0.00 0.00 0.00 3.60
4432 6132 1.385528 AAGGAAGCAACGAAAACGGT 58.614 45.000 0.00 0.00 0.00 4.83
4433 6133 2.243602 AGGAAGCAACGAAAACGGTA 57.756 45.000 0.00 0.00 0.00 4.02
4434 6134 2.774687 AGGAAGCAACGAAAACGGTAT 58.225 42.857 0.00 0.00 0.00 2.73
4437 6139 2.172851 AGCAACGAAAACGGTATGGA 57.827 45.000 0.00 0.00 0.00 3.41
4441 6143 3.365565 GCAACGAAAACGGTATGGACAAT 60.366 43.478 0.00 0.00 0.00 2.71
4455 6157 2.025131 TGGACAATGATCATCCCAGCAA 60.025 45.455 9.06 0.00 0.00 3.91
4456 6158 3.228453 GGACAATGATCATCCCAGCAAT 58.772 45.455 9.06 0.00 0.00 3.56
4608 6310 2.513666 GGCGGCGATGATGGTCAA 60.514 61.111 12.98 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 7.929941 AAGGCCATTTATAGCTCTTTATAGC 57.070 36.000 5.01 0.00 43.11 2.97
8 9 9.449719 GCTAAAGGCCATTTATAGCTCTTTATA 57.550 33.333 5.01 0.00 34.37 0.98
9 10 7.944554 TGCTAAAGGCCATTTATAGCTCTTTAT 59.055 33.333 19.28 0.00 40.92 1.40
10 11 7.228706 GTGCTAAAGGCCATTTATAGCTCTTTA 59.771 37.037 19.28 6.19 40.92 1.85
11 12 6.039829 GTGCTAAAGGCCATTTATAGCTCTTT 59.960 38.462 19.28 5.48 40.92 2.52
12 13 5.532779 GTGCTAAAGGCCATTTATAGCTCTT 59.467 40.000 19.28 0.00 40.92 2.85
13 14 5.066593 GTGCTAAAGGCCATTTATAGCTCT 58.933 41.667 19.28 0.00 40.92 4.09
14 15 5.066593 AGTGCTAAAGGCCATTTATAGCTC 58.933 41.667 19.28 16.73 40.92 4.09
15 16 5.053978 AGTGCTAAAGGCCATTTATAGCT 57.946 39.130 19.28 0.00 40.92 3.32
16 17 5.107065 CGTAGTGCTAAAGGCCATTTATAGC 60.107 44.000 5.01 11.55 40.92 2.97
17 18 5.408604 CCGTAGTGCTAAAGGCCATTTATAG 59.591 44.000 5.01 0.54 40.92 1.31
18 19 5.070714 TCCGTAGTGCTAAAGGCCATTTATA 59.929 40.000 5.01 0.00 40.92 0.98
19 20 4.134563 CCGTAGTGCTAAAGGCCATTTAT 58.865 43.478 5.01 0.00 40.92 1.40
20 21 3.198200 TCCGTAGTGCTAAAGGCCATTTA 59.802 43.478 5.01 6.38 40.92 1.40
21 22 2.026636 TCCGTAGTGCTAAAGGCCATTT 60.027 45.455 5.01 5.42 40.92 2.32
22 23 1.557832 TCCGTAGTGCTAAAGGCCATT 59.442 47.619 5.01 0.33 40.92 3.16
23 24 1.139058 CTCCGTAGTGCTAAAGGCCAT 59.861 52.381 5.01 0.00 40.92 4.40
24 25 0.535335 CTCCGTAGTGCTAAAGGCCA 59.465 55.000 5.01 0.00 40.92 5.36
25 26 0.535797 ACTCCGTAGTGCTAAAGGCC 59.464 55.000 0.00 0.00 40.92 5.19
26 27 1.641577 CACTCCGTAGTGCTAAAGGC 58.358 55.000 0.00 0.00 46.28 4.35
35 36 0.892358 TCAGGCGTTCACTCCGTAGT 60.892 55.000 0.00 0.00 35.91 2.73
36 37 0.456312 GTCAGGCGTTCACTCCGTAG 60.456 60.000 0.00 0.00 0.00 3.51
37 38 1.582968 GTCAGGCGTTCACTCCGTA 59.417 57.895 0.00 0.00 0.00 4.02
38 39 2.338984 GTCAGGCGTTCACTCCGT 59.661 61.111 0.00 0.00 0.00 4.69
39 40 2.432628 GGTCAGGCGTTCACTCCG 60.433 66.667 0.00 0.00 0.00 4.63
40 41 2.432628 CGGTCAGGCGTTCACTCC 60.433 66.667 0.00 0.00 0.00 3.85
41 42 1.300697 AACGGTCAGGCGTTCACTC 60.301 57.895 0.00 0.00 0.00 3.51
42 43 1.594293 CAACGGTCAGGCGTTCACT 60.594 57.895 0.00 0.00 0.00 3.41
43 44 2.935955 CAACGGTCAGGCGTTCAC 59.064 61.111 0.00 0.00 0.00 3.18
44 45 2.970324 GCAACGGTCAGGCGTTCA 60.970 61.111 0.00 0.00 0.00 3.18
45 46 3.723348 GGCAACGGTCAGGCGTTC 61.723 66.667 0.00 0.00 0.00 3.95
57 58 3.050275 GCCACTCAGGACGGCAAC 61.050 66.667 0.00 0.00 45.52 4.17
60 61 0.741221 CTAAAGCCACTCAGGACGGC 60.741 60.000 0.00 0.00 46.62 5.68
61 62 0.895530 TCTAAAGCCACTCAGGACGG 59.104 55.000 0.00 0.00 41.22 4.79
62 63 1.404315 GGTCTAAAGCCACTCAGGACG 60.404 57.143 0.00 0.00 41.22 4.79
63 64 1.903183 AGGTCTAAAGCCACTCAGGAC 59.097 52.381 0.00 0.00 41.22 3.85
64 65 2.327325 AGGTCTAAAGCCACTCAGGA 57.673 50.000 0.00 0.00 41.22 3.86
65 66 2.569404 AGAAGGTCTAAAGCCACTCAGG 59.431 50.000 0.00 0.00 41.84 3.86
66 67 3.007398 ACAGAAGGTCTAAAGCCACTCAG 59.993 47.826 0.00 0.00 0.00 3.35
67 68 2.972713 ACAGAAGGTCTAAAGCCACTCA 59.027 45.455 0.00 0.00 0.00 3.41
68 69 3.686916 ACAGAAGGTCTAAAGCCACTC 57.313 47.619 0.00 0.00 0.00 3.51
69 70 3.648545 AGAACAGAAGGTCTAAAGCCACT 59.351 43.478 0.00 0.00 0.00 4.00
70 71 4.009370 AGAACAGAAGGTCTAAAGCCAC 57.991 45.455 0.00 0.00 0.00 5.01
71 72 4.642429 GAAGAACAGAAGGTCTAAAGCCA 58.358 43.478 0.00 0.00 0.00 4.75
72 73 3.680458 CGAAGAACAGAAGGTCTAAAGCC 59.320 47.826 0.00 0.00 0.00 4.35
73 74 4.557205 TCGAAGAACAGAAGGTCTAAAGC 58.443 43.478 0.00 0.00 0.00 3.51
74 75 5.631512 CACTCGAAGAACAGAAGGTCTAAAG 59.368 44.000 0.00 0.00 34.09 1.85
75 76 5.301045 TCACTCGAAGAACAGAAGGTCTAAA 59.699 40.000 0.00 0.00 34.09 1.85
76 77 4.825634 TCACTCGAAGAACAGAAGGTCTAA 59.174 41.667 0.00 0.00 34.09 2.10
77 78 4.395625 TCACTCGAAGAACAGAAGGTCTA 58.604 43.478 0.00 0.00 34.09 2.59
78 79 3.223435 TCACTCGAAGAACAGAAGGTCT 58.777 45.455 0.00 0.00 34.09 3.85
79 80 3.644884 TCACTCGAAGAACAGAAGGTC 57.355 47.619 0.00 0.00 34.09 3.85
80 81 4.282195 AGAATCACTCGAAGAACAGAAGGT 59.718 41.667 0.00 0.00 34.09 3.50
81 82 4.815269 AGAATCACTCGAAGAACAGAAGG 58.185 43.478 0.00 0.00 34.09 3.46
82 83 5.060323 CGAAGAATCACTCGAAGAACAGAAG 59.940 44.000 0.00 0.00 34.09 2.85
83 84 4.917998 CGAAGAATCACTCGAAGAACAGAA 59.082 41.667 0.00 0.00 34.09 3.02
84 85 4.023107 ACGAAGAATCACTCGAAGAACAGA 60.023 41.667 10.93 0.00 34.09 3.41
85 86 4.089208 CACGAAGAATCACTCGAAGAACAG 59.911 45.833 10.93 0.00 34.09 3.16
86 87 3.981416 CACGAAGAATCACTCGAAGAACA 59.019 43.478 10.93 0.00 34.09 3.18
87 88 3.982058 ACACGAAGAATCACTCGAAGAAC 59.018 43.478 10.93 0.00 34.09 3.01
88 89 3.981416 CACACGAAGAATCACTCGAAGAA 59.019 43.478 10.93 0.00 34.09 2.52
89 90 3.565516 CACACGAAGAATCACTCGAAGA 58.434 45.455 10.93 0.00 0.00 2.87
90 91 2.663602 CCACACGAAGAATCACTCGAAG 59.336 50.000 10.93 6.24 0.00 3.79
91 92 2.035449 ACCACACGAAGAATCACTCGAA 59.965 45.455 10.93 0.00 0.00 3.71
92 93 1.611977 ACCACACGAAGAATCACTCGA 59.388 47.619 10.93 0.00 0.00 4.04
93 94 1.986378 GACCACACGAAGAATCACTCG 59.014 52.381 0.00 3.69 0.00 4.18
94 95 1.986378 CGACCACACGAAGAATCACTC 59.014 52.381 0.00 0.00 35.09 3.51
95 96 1.611977 TCGACCACACGAAGAATCACT 59.388 47.619 0.00 0.00 39.34 3.41
96 97 1.719780 GTCGACCACACGAAGAATCAC 59.280 52.381 3.51 0.00 43.75 3.06
97 98 1.336517 GGTCGACCACACGAAGAATCA 60.337 52.381 29.75 0.00 43.75 2.57
98 99 1.347320 GGTCGACCACACGAAGAATC 58.653 55.000 29.75 0.00 43.75 2.52
99 100 0.388134 CGGTCGACCACACGAAGAAT 60.388 55.000 32.80 0.00 43.75 2.40
100 101 1.008194 CGGTCGACCACACGAAGAA 60.008 57.895 32.80 0.00 43.75 2.52
101 102 1.893335 TCGGTCGACCACACGAAGA 60.893 57.895 32.80 17.60 43.75 2.87
102 103 1.728426 GTCGGTCGACCACACGAAG 60.728 63.158 32.80 15.53 43.75 3.79
103 104 2.121564 GAGTCGGTCGACCACACGAA 62.122 60.000 32.80 8.84 45.59 3.85
104 105 2.592574 AGTCGGTCGACCACACGA 60.593 61.111 32.80 21.16 45.59 4.35
105 106 1.293963 TAGAGTCGGTCGACCACACG 61.294 60.000 32.80 19.21 45.59 4.49
106 107 1.063764 GATAGAGTCGGTCGACCACAC 59.936 57.143 32.80 26.50 45.59 3.82
107 108 1.065636 AGATAGAGTCGGTCGACCACA 60.066 52.381 32.80 16.95 45.59 4.17
108 109 1.666054 AGATAGAGTCGGTCGACCAC 58.334 55.000 32.80 26.74 45.59 4.16
109 110 2.014857 CAAGATAGAGTCGGTCGACCA 58.985 52.381 32.80 17.85 45.59 4.02
110 111 1.334243 CCAAGATAGAGTCGGTCGACC 59.666 57.143 25.28 25.28 45.59 4.79
111 112 2.015587 ACCAAGATAGAGTCGGTCGAC 58.984 52.381 14.79 14.79 44.86 4.20
112 113 2.286872 GACCAAGATAGAGTCGGTCGA 58.713 52.381 0.00 0.00 37.04 4.20
113 114 2.759538 GACCAAGATAGAGTCGGTCG 57.240 55.000 0.00 0.00 37.04 4.79
118 119 4.920640 TCCATTCGACCAAGATAGAGTC 57.079 45.455 0.00 0.00 0.00 3.36
119 120 5.878406 ATTCCATTCGACCAAGATAGAGT 57.122 39.130 0.00 0.00 0.00 3.24
120 121 5.468072 CCAATTCCATTCGACCAAGATAGAG 59.532 44.000 0.00 0.00 0.00 2.43
121 122 5.368145 CCAATTCCATTCGACCAAGATAGA 58.632 41.667 0.00 0.00 0.00 1.98
122 123 4.516698 CCCAATTCCATTCGACCAAGATAG 59.483 45.833 0.00 0.00 0.00 2.08
123 124 4.165180 TCCCAATTCCATTCGACCAAGATA 59.835 41.667 0.00 0.00 0.00 1.98
124 125 3.053693 TCCCAATTCCATTCGACCAAGAT 60.054 43.478 0.00 0.00 0.00 2.40
125 126 2.307392 TCCCAATTCCATTCGACCAAGA 59.693 45.455 0.00 0.00 0.00 3.02
126 127 2.722094 TCCCAATTCCATTCGACCAAG 58.278 47.619 0.00 0.00 0.00 3.61
127 128 2.889170 TCCCAATTCCATTCGACCAA 57.111 45.000 0.00 0.00 0.00 3.67
128 129 4.506625 GGATATCCCAATTCCATTCGACCA 60.507 45.833 11.02 0.00 34.14 4.02
129 130 4.010349 GGATATCCCAATTCCATTCGACC 58.990 47.826 11.02 0.00 34.14 4.79
130 131 3.684788 CGGATATCCCAATTCCATTCGAC 59.315 47.826 16.36 0.00 34.14 4.20
131 132 3.580895 TCGGATATCCCAATTCCATTCGA 59.419 43.478 16.36 2.44 34.14 3.71
132 133 3.937814 TCGGATATCCCAATTCCATTCG 58.062 45.455 16.36 0.00 34.14 3.34
133 134 5.126061 CCATTCGGATATCCCAATTCCATTC 59.874 44.000 16.36 0.00 34.14 2.67
134 135 5.018809 CCATTCGGATATCCCAATTCCATT 58.981 41.667 16.36 0.00 34.14 3.16
135 136 4.292041 TCCATTCGGATATCCCAATTCCAT 59.708 41.667 16.36 0.00 35.91 3.41
136 137 3.655291 TCCATTCGGATATCCCAATTCCA 59.345 43.478 16.36 0.00 35.91 3.53
137 138 4.301072 TCCATTCGGATATCCCAATTCC 57.699 45.455 16.36 0.00 35.91 3.01
148 149 7.461947 CACTCGACCAGTTATCCATTCGGAT 62.462 48.000 0.00 0.00 44.02 4.18
149 150 4.190023 ACTCGACCAGTTATCCATTCGGA 61.190 47.826 0.00 0.00 37.73 4.55
150 151 2.100916 ACTCGACCAGTTATCCATTCGG 59.899 50.000 0.00 0.00 26.56 4.30
151 152 3.116300 CACTCGACCAGTTATCCATTCG 58.884 50.000 0.00 0.00 30.26 3.34
152 153 3.132289 TCCACTCGACCAGTTATCCATTC 59.868 47.826 0.00 0.00 30.26 2.67
153 154 3.104512 TCCACTCGACCAGTTATCCATT 58.895 45.455 0.00 0.00 30.26 3.16
154 155 2.747177 TCCACTCGACCAGTTATCCAT 58.253 47.619 0.00 0.00 30.26 3.41
155 156 2.225382 TCCACTCGACCAGTTATCCA 57.775 50.000 0.00 0.00 30.26 3.41
156 157 3.458189 CAATCCACTCGACCAGTTATCC 58.542 50.000 0.00 0.00 30.26 2.59
157 158 2.866762 GCAATCCACTCGACCAGTTATC 59.133 50.000 0.00 0.00 30.26 1.75
158 159 2.236146 TGCAATCCACTCGACCAGTTAT 59.764 45.455 0.00 0.00 30.26 1.89
159 160 1.621317 TGCAATCCACTCGACCAGTTA 59.379 47.619 0.00 0.00 30.26 2.24
160 161 0.396435 TGCAATCCACTCGACCAGTT 59.604 50.000 0.00 0.00 30.26 3.16
161 162 0.320771 GTGCAATCCACTCGACCAGT 60.321 55.000 0.00 0.00 41.35 4.00
162 163 2.460330 GTGCAATCCACTCGACCAG 58.540 57.895 0.00 0.00 41.35 4.00
163 164 4.693532 GTGCAATCCACTCGACCA 57.306 55.556 0.00 0.00 41.35 4.02
170 171 1.956477 ACACCTTGAAGTGCAATCCAC 59.044 47.619 0.00 0.00 45.01 4.02
171 172 2.363306 ACACCTTGAAGTGCAATCCA 57.637 45.000 0.00 0.00 41.67 3.41
172 173 3.733443 AAACACCTTGAAGTGCAATCC 57.267 42.857 0.00 0.00 41.67 3.01
173 174 4.681744 TGAAAACACCTTGAAGTGCAATC 58.318 39.130 0.00 0.00 41.67 2.67
174 175 4.160252 ACTGAAAACACCTTGAAGTGCAAT 59.840 37.500 0.00 0.00 41.67 3.56
175 176 3.509575 ACTGAAAACACCTTGAAGTGCAA 59.490 39.130 0.00 0.00 41.67 4.08
176 177 3.088532 ACTGAAAACACCTTGAAGTGCA 58.911 40.909 0.00 0.00 41.67 4.57
177 178 3.695816 GACTGAAAACACCTTGAAGTGC 58.304 45.455 0.00 0.00 41.67 4.40
178 179 3.242739 CCGACTGAAAACACCTTGAAGTG 60.243 47.826 0.00 0.00 43.65 3.16
179 180 2.943033 CCGACTGAAAACACCTTGAAGT 59.057 45.455 0.00 0.00 0.00 3.01
180 181 2.287009 GCCGACTGAAAACACCTTGAAG 60.287 50.000 0.00 0.00 0.00 3.02
181 182 1.673920 GCCGACTGAAAACACCTTGAA 59.326 47.619 0.00 0.00 0.00 2.69
182 183 1.305201 GCCGACTGAAAACACCTTGA 58.695 50.000 0.00 0.00 0.00 3.02
183 184 1.021202 TGCCGACTGAAAACACCTTG 58.979 50.000 0.00 0.00 0.00 3.61
184 185 1.880027 GATGCCGACTGAAAACACCTT 59.120 47.619 0.00 0.00 0.00 3.50
185 186 1.072331 AGATGCCGACTGAAAACACCT 59.928 47.619 0.00 0.00 0.00 4.00
186 187 1.523758 AGATGCCGACTGAAAACACC 58.476 50.000 0.00 0.00 0.00 4.16
187 188 2.808543 AGAAGATGCCGACTGAAAACAC 59.191 45.455 0.00 0.00 0.00 3.32
188 189 2.807967 CAGAAGATGCCGACTGAAAACA 59.192 45.455 0.00 0.00 32.90 2.83
189 190 2.808543 ACAGAAGATGCCGACTGAAAAC 59.191 45.455 0.00 0.00 34.88 2.43
190 191 3.126001 ACAGAAGATGCCGACTGAAAA 57.874 42.857 0.00 0.00 34.88 2.29
191 192 2.807967 CAACAGAAGATGCCGACTGAAA 59.192 45.455 0.00 0.00 34.88 2.69
192 193 2.224281 ACAACAGAAGATGCCGACTGAA 60.224 45.455 0.00 0.00 34.88 3.02
193 194 1.344438 ACAACAGAAGATGCCGACTGA 59.656 47.619 0.00 0.00 34.88 3.41
194 195 1.728971 GACAACAGAAGATGCCGACTG 59.271 52.381 0.00 0.00 36.58 3.51
195 196 1.338200 GGACAACAGAAGATGCCGACT 60.338 52.381 0.00 0.00 0.00 4.18
196 197 1.079503 GGACAACAGAAGATGCCGAC 58.920 55.000 0.00 0.00 0.00 4.79
197 198 0.976641 AGGACAACAGAAGATGCCGA 59.023 50.000 0.00 0.00 0.00 5.54
198 199 1.813513 AAGGACAACAGAAGATGCCG 58.186 50.000 0.00 0.00 0.00 5.69
199 200 3.149196 TCAAAGGACAACAGAAGATGCC 58.851 45.455 0.00 0.00 0.00 4.40
200 201 3.817647 ACTCAAAGGACAACAGAAGATGC 59.182 43.478 0.00 0.00 0.00 3.91
201 202 4.818546 ACACTCAAAGGACAACAGAAGATG 59.181 41.667 0.00 0.00 0.00 2.90
202 203 5.041191 ACACTCAAAGGACAACAGAAGAT 57.959 39.130 0.00 0.00 0.00 2.40
203 204 4.162320 AGACACTCAAAGGACAACAGAAGA 59.838 41.667 0.00 0.00 0.00 2.87
204 205 4.446371 AGACACTCAAAGGACAACAGAAG 58.554 43.478 0.00 0.00 0.00 2.85
205 206 4.487714 AGACACTCAAAGGACAACAGAA 57.512 40.909 0.00 0.00 0.00 3.02
206 207 4.487714 AAGACACTCAAAGGACAACAGA 57.512 40.909 0.00 0.00 0.00 3.41
207 208 4.635765 TCAAAGACACTCAAAGGACAACAG 59.364 41.667 0.00 0.00 0.00 3.16
208 209 4.394920 GTCAAAGACACTCAAAGGACAACA 59.605 41.667 0.00 0.00 32.09 3.33
209 210 4.636206 AGTCAAAGACACTCAAAGGACAAC 59.364 41.667 0.00 0.00 34.60 3.32
210 211 4.843728 AGTCAAAGACACTCAAAGGACAA 58.156 39.130 0.00 0.00 34.60 3.18
211 212 4.162320 AGAGTCAAAGACACTCAAAGGACA 59.838 41.667 2.84 0.00 42.51 4.02
212 213 4.698575 AGAGTCAAAGACACTCAAAGGAC 58.301 43.478 2.84 0.00 42.51 3.85
213 214 5.011125 CCTAGAGTCAAAGACACTCAAAGGA 59.989 44.000 12.58 0.00 43.02 3.36
214 215 5.233988 CCTAGAGTCAAAGACACTCAAAGG 58.766 45.833 0.45 5.11 42.51 3.11
215 216 5.233988 CCCTAGAGTCAAAGACACTCAAAG 58.766 45.833 0.45 0.30 42.51 2.77
216 217 4.503296 GCCCTAGAGTCAAAGACACTCAAA 60.503 45.833 0.45 0.00 42.51 2.69
217 218 3.006967 GCCCTAGAGTCAAAGACACTCAA 59.993 47.826 0.45 0.00 42.51 3.02
218 219 2.563179 GCCCTAGAGTCAAAGACACTCA 59.437 50.000 0.45 0.00 42.51 3.41
219 220 2.563179 TGCCCTAGAGTCAAAGACACTC 59.437 50.000 0.45 0.00 40.67 3.51
220 221 2.564947 CTGCCCTAGAGTCAAAGACACT 59.435 50.000 0.00 2.86 37.29 3.55
221 222 2.300437 ACTGCCCTAGAGTCAAAGACAC 59.700 50.000 0.00 0.00 34.60 3.67
222 223 2.300152 CACTGCCCTAGAGTCAAAGACA 59.700 50.000 0.00 0.00 34.60 3.41
223 224 2.300437 ACACTGCCCTAGAGTCAAAGAC 59.700 50.000 0.00 0.00 0.00 3.01
224 225 2.563179 GACACTGCCCTAGAGTCAAAGA 59.437 50.000 0.00 0.00 43.77 2.52
225 226 2.354203 GGACACTGCCCTAGAGTCAAAG 60.354 54.545 6.78 0.00 45.43 2.77
226 227 1.623811 GGACACTGCCCTAGAGTCAAA 59.376 52.381 6.78 0.00 45.43 2.69
227 228 1.203187 AGGACACTGCCCTAGAGTCAA 60.203 52.381 6.78 0.00 45.43 3.18
228 229 0.409876 AGGACACTGCCCTAGAGTCA 59.590 55.000 6.78 0.00 45.43 3.41
229 230 1.205893 CAAGGACACTGCCCTAGAGTC 59.794 57.143 0.00 0.00 43.65 3.36
230 231 1.270907 CAAGGACACTGCCCTAGAGT 58.729 55.000 0.00 0.00 32.77 3.24
231 232 0.539051 CCAAGGACACTGCCCTAGAG 59.461 60.000 0.00 0.00 32.77 2.43
232 233 0.909610 CCCAAGGACACTGCCCTAGA 60.910 60.000 0.00 0.00 32.77 2.43
233 234 1.201429 ACCCAAGGACACTGCCCTAG 61.201 60.000 0.00 0.00 32.77 3.02
234 235 0.117541 TACCCAAGGACACTGCCCTA 59.882 55.000 0.00 0.00 32.77 3.53
235 236 1.151899 TACCCAAGGACACTGCCCT 60.152 57.895 0.00 0.00 35.03 5.19
236 237 1.002502 GTACCCAAGGACACTGCCC 60.003 63.158 0.00 0.00 0.00 5.36
237 238 1.375523 CGTACCCAAGGACACTGCC 60.376 63.158 0.00 0.00 0.00 4.85
238 239 0.669625 GTCGTACCCAAGGACACTGC 60.670 60.000 0.00 0.00 41.62 4.40
239 240 0.388134 CGTCGTACCCAAGGACACTG 60.388 60.000 0.00 0.00 42.01 3.66
240 241 0.825010 ACGTCGTACCCAAGGACACT 60.825 55.000 0.00 0.00 42.01 3.55
241 242 0.387750 GACGTCGTACCCAAGGACAC 60.388 60.000 0.00 0.00 42.01 3.67
242 243 0.538057 AGACGTCGTACCCAAGGACA 60.538 55.000 10.46 0.00 42.01 4.02
243 244 1.399791 CTAGACGTCGTACCCAAGGAC 59.600 57.143 10.46 0.00 39.19 3.85
244 245 1.679944 CCTAGACGTCGTACCCAAGGA 60.680 57.143 10.46 0.00 0.00 3.36
245 246 0.737219 CCTAGACGTCGTACCCAAGG 59.263 60.000 10.46 6.00 0.00 3.61
246 247 1.399791 GACCTAGACGTCGTACCCAAG 59.600 57.143 10.46 0.70 0.00 3.61
247 248 1.271325 TGACCTAGACGTCGTACCCAA 60.271 52.381 10.46 0.00 35.40 4.12
248 249 0.324614 TGACCTAGACGTCGTACCCA 59.675 55.000 10.46 4.48 35.40 4.51
249 250 1.012841 CTGACCTAGACGTCGTACCC 58.987 60.000 10.46 1.75 35.40 3.69
250 251 1.012841 CCTGACCTAGACGTCGTACC 58.987 60.000 10.46 0.65 35.40 3.34
251 252 0.376502 GCCTGACCTAGACGTCGTAC 59.623 60.000 10.46 2.40 35.40 3.67
252 253 0.745845 GGCCTGACCTAGACGTCGTA 60.746 60.000 10.46 2.39 35.40 3.43
253 254 2.045131 GGCCTGACCTAGACGTCGT 61.045 63.158 10.46 0.00 35.40 4.34
254 255 2.799371 GGCCTGACCTAGACGTCG 59.201 66.667 10.46 0.00 35.40 5.12
264 265 1.049402 GGTAGGGTCATAGGCCTGAC 58.951 60.000 17.99 16.31 43.90 3.51
265 266 0.105142 GGGTAGGGTCATAGGCCTGA 60.105 60.000 17.99 2.17 0.00 3.86
266 267 0.104934 AGGGTAGGGTCATAGGCCTG 60.105 60.000 17.99 0.00 0.00 4.85
267 268 1.433592 CTAGGGTAGGGTCATAGGCCT 59.566 57.143 11.78 11.78 0.00 5.19
268 269 1.552719 CCTAGGGTAGGGTCATAGGCC 60.553 61.905 0.00 0.00 42.42 5.19
269 270 1.939980 CCTAGGGTAGGGTCATAGGC 58.060 60.000 0.00 0.00 42.42 3.93
279 280 2.621998 CGGTGACATGTACCTAGGGTAG 59.378 54.545 14.81 0.52 39.02 3.18
280 281 2.025037 ACGGTGACATGTACCTAGGGTA 60.025 50.000 14.81 0.12 37.09 3.69
281 282 1.272872 ACGGTGACATGTACCTAGGGT 60.273 52.381 14.81 0.00 40.16 4.34
282 283 1.407979 GACGGTGACATGTACCTAGGG 59.592 57.143 14.81 0.00 36.03 3.53
283 284 2.097036 TGACGGTGACATGTACCTAGG 58.903 52.381 7.41 7.41 36.03 3.02
284 285 2.159282 GGTGACGGTGACATGTACCTAG 60.159 54.545 17.11 9.04 36.03 3.02
285 286 1.820519 GGTGACGGTGACATGTACCTA 59.179 52.381 17.11 6.15 36.03 3.08
286 287 0.606604 GGTGACGGTGACATGTACCT 59.393 55.000 17.11 8.48 36.03 3.08
287 288 0.390735 GGGTGACGGTGACATGTACC 60.391 60.000 0.00 6.38 34.81 3.34
288 289 0.390735 GGGGTGACGGTGACATGTAC 60.391 60.000 0.00 0.00 0.00 2.90
289 290 0.832559 TGGGGTGACGGTGACATGTA 60.833 55.000 0.00 0.00 0.00 2.29
290 291 2.144078 TGGGGTGACGGTGACATGT 61.144 57.895 0.00 0.00 0.00 3.21
291 292 1.671054 GTGGGGTGACGGTGACATG 60.671 63.158 0.00 0.00 0.00 3.21
292 293 2.747686 GTGGGGTGACGGTGACAT 59.252 61.111 0.00 0.00 0.00 3.06
293 294 3.552384 GGTGGGGTGACGGTGACA 61.552 66.667 0.00 0.00 0.00 3.58
294 295 3.552384 TGGTGGGGTGACGGTGAC 61.552 66.667 0.00 0.00 0.00 3.67
295 296 3.552384 GTGGTGGGGTGACGGTGA 61.552 66.667 0.00 0.00 0.00 4.02
296 297 4.636435 GGTGGTGGGGTGACGGTG 62.636 72.222 0.00 0.00 0.00 4.94
297 298 4.892291 AGGTGGTGGGGTGACGGT 62.892 66.667 0.00 0.00 0.00 4.83
298 299 4.329545 CAGGTGGTGGGGTGACGG 62.330 72.222 0.00 0.00 0.00 4.79
299 300 3.238497 TCAGGTGGTGGGGTGACG 61.238 66.667 0.00 0.00 0.00 4.35
300 301 2.397413 CTGTCAGGTGGTGGGGTGAC 62.397 65.000 0.00 0.00 39.85 3.67
301 302 2.040359 TGTCAGGTGGTGGGGTGA 60.040 61.111 0.00 0.00 0.00 4.02
302 303 1.125093 TACTGTCAGGTGGTGGGGTG 61.125 60.000 4.53 0.00 0.00 4.61
303 304 0.178873 ATACTGTCAGGTGGTGGGGT 60.179 55.000 4.53 0.00 0.00 4.95
311 312 1.765314 GAGCCATCCATACTGTCAGGT 59.235 52.381 4.53 0.00 0.00 4.00
312 313 1.764723 TGAGCCATCCATACTGTCAGG 59.235 52.381 4.53 0.00 0.00 3.86
399 400 0.603975 GTTGTGTCCCACTCTGAGCC 60.604 60.000 4.19 0.00 35.11 4.70
402 403 0.673985 CTCGTTGTGTCCCACTCTGA 59.326 55.000 0.00 0.00 35.11 3.27
439 440 3.144120 CTCACGCAGGAGGGGATCG 62.144 68.421 0.00 0.00 0.00 3.69
478 479 6.013379 TCAGAGAAGAGAGATACCACTGTTT 58.987 40.000 0.00 0.00 0.00 2.83
484 485 5.144100 GGGAATCAGAGAAGAGAGATACCA 58.856 45.833 0.00 0.00 0.00 3.25
487 488 5.409590 TGGGGAATCAGAGAAGAGAGATA 57.590 43.478 0.00 0.00 0.00 1.98
488 489 4.277788 TGGGGAATCAGAGAAGAGAGAT 57.722 45.455 0.00 0.00 0.00 2.75
489 490 3.765432 TGGGGAATCAGAGAAGAGAGA 57.235 47.619 0.00 0.00 0.00 3.10
500 501 7.365652 GGTTCTAGAGTAAGAAATGGGGAATCA 60.366 40.741 0.00 0.00 37.24 2.57
516 517 5.390087 TGCAGATACTAGGGTTCTAGAGT 57.610 43.478 7.35 0.00 44.35 3.24
538 539 3.751175 CACCACATGATACGGAGTTTGTT 59.249 43.478 0.00 0.00 37.78 2.83
553 554 3.244561 ACCTTCACTCGATTTCACCACAT 60.245 43.478 0.00 0.00 0.00 3.21
555 556 2.767505 ACCTTCACTCGATTTCACCAC 58.232 47.619 0.00 0.00 0.00 4.16
631 632 6.238103 GCTAGCAACGATTATAAGCACTGAAA 60.238 38.462 10.63 0.00 0.00 2.69
645 646 2.159014 TCATAAACCGGCTAGCAACGAT 60.159 45.455 18.24 0.00 0.00 3.73
650 651 3.466836 CAGATTCATAAACCGGCTAGCA 58.533 45.455 18.24 0.00 0.00 3.49
656 657 8.848474 AAGTTATATCCAGATTCATAAACCGG 57.152 34.615 0.00 0.00 0.00 5.28
692 693 1.258720 GGTACAACGAACGTCAACACC 59.741 52.381 0.00 3.04 0.00 4.16
773 774 1.405872 TTAGATCCGCGCCTTCCTTA 58.594 50.000 0.00 0.00 0.00 2.69
785 786 1.569479 GCCCGCTCGCATTTAGATCC 61.569 60.000 0.00 0.00 0.00 3.36
816 817 2.435586 CAGGCTCGGTTGCTCCAG 60.436 66.667 0.00 0.00 35.57 3.86
817 818 4.020617 CCAGGCTCGGTTGCTCCA 62.021 66.667 0.00 0.00 35.57 3.86
863 2185 8.776061 TTCTTCTTTTCTTTTCCAGGGAAATA 57.224 30.769 13.87 3.70 42.71 1.40
880 2202 9.083422 CCTTTCCCTTTTATCTCTTTCTTCTTT 57.917 33.333 0.00 0.00 0.00 2.52
882 2204 7.990055 TCCTTTCCCTTTTATCTCTTTCTTCT 58.010 34.615 0.00 0.00 0.00 2.85
883 2205 8.637196 TTCCTTTCCCTTTTATCTCTTTCTTC 57.363 34.615 0.00 0.00 0.00 2.87
885 2207 7.990055 TCTTCCTTTCCCTTTTATCTCTTTCT 58.010 34.615 0.00 0.00 0.00 2.52
886 2208 8.516234 GTTCTTCCTTTCCCTTTTATCTCTTTC 58.484 37.037 0.00 0.00 0.00 2.62
1270 2919 2.443390 ATCGAATCGGGGTCGGGT 60.443 61.111 1.76 0.00 39.01 5.28
1271 2920 2.201022 AGATCGAATCGGGGTCGGG 61.201 63.158 1.76 0.00 39.01 5.14
1272 2921 1.007271 CAGATCGAATCGGGGTCGG 60.007 63.158 1.76 0.00 39.01 4.79
1273 2922 1.007271 CCAGATCGAATCGGGGTCG 60.007 63.158 1.76 0.00 40.41 4.79
1274 2923 0.464452 AACCAGATCGAATCGGGGTC 59.536 55.000 1.76 0.00 40.75 4.46
1275 2924 0.909623 AAACCAGATCGAATCGGGGT 59.090 50.000 1.76 3.18 46.91 4.95
1314 2979 6.024664 CGGAGTATATCGCTATCAAAGACAG 58.975 44.000 0.00 0.00 0.00 3.51
1334 2999 0.592247 GGCAATTGCGCAATACGGAG 60.592 55.000 34.05 21.35 45.41 4.63
1336 3001 0.660488 TAGGCAATTGCGCAATACGG 59.340 50.000 34.05 25.55 43.93 4.02
1346 3011 0.179166 ACACGCGCAATAGGCAATTG 60.179 50.000 5.73 0.00 46.62 2.32
1347 3012 0.179166 CACACGCGCAATAGGCAATT 60.179 50.000 5.73 0.00 45.17 2.32
1348 3013 1.305219 ACACACGCGCAATAGGCAAT 61.305 50.000 5.73 0.00 45.17 3.56
1349 3014 1.963855 ACACACGCGCAATAGGCAA 60.964 52.632 5.73 0.00 45.17 4.52
1350 3015 2.358125 ACACACGCGCAATAGGCA 60.358 55.556 5.73 0.00 45.17 4.75
1431 3096 2.308570 ACATAGACCAAAGCACCCATCA 59.691 45.455 0.00 0.00 0.00 3.07
1528 3193 9.308318 GATGAGGAAGAACTGAAGATTAGTAAC 57.692 37.037 0.00 0.00 0.00 2.50
1556 3221 3.069158 CCTAGGTTGGGGTAACAGATACG 59.931 52.174 0.00 0.00 41.18 3.06
1597 3262 3.282831 ACGCAAAGTATGGACAAAAGC 57.717 42.857 0.00 0.00 0.00 3.51
1659 3324 2.070783 GCACAAACATGCTTGGGAATG 58.929 47.619 15.23 4.29 42.62 2.67
1710 3375 2.905075 ACTTTTTGCTTGGGTTTCTGC 58.095 42.857 0.00 0.00 0.00 4.26
1763 3428 6.018180 GGGTAAAGGCAAATCGTGTTATAGAG 60.018 42.308 0.00 0.00 0.00 2.43
1790 3455 0.177604 GCTCCCTGGTCACATCAGAG 59.822 60.000 0.00 0.00 34.36 3.35
1808 3473 1.336125 GCATGGCCAGATAACTTGAGC 59.664 52.381 13.05 0.00 0.00 4.26
1890 3558 6.150976 TGGACCTGATTGTTTGATCATGTAAC 59.849 38.462 0.00 0.00 35.79 2.50
2045 3713 1.613925 ACAGAAACGTCTAGCTGAGCA 59.386 47.619 7.39 0.00 30.85 4.26
2068 3736 1.071305 GCGTTTTTGAGCAATGCACAC 60.071 47.619 8.35 0.00 36.35 3.82
2097 3765 4.440112 GCAGTTGGCACATATTAAGGAACC 60.440 45.833 0.00 0.00 43.97 3.62
2137 3805 5.433051 AGTCATCTATTTTGGAATGGAGGGA 59.567 40.000 0.00 0.00 36.39 4.20
2138 3806 5.699143 AGTCATCTATTTTGGAATGGAGGG 58.301 41.667 0.00 0.00 36.39 4.30
2139 3807 6.359804 TGAGTCATCTATTTTGGAATGGAGG 58.640 40.000 0.00 0.00 36.39 4.30
2140 3808 7.555554 AGTTGAGTCATCTATTTTGGAATGGAG 59.444 37.037 1.70 0.00 36.39 3.86
2141 3809 7.405292 AGTTGAGTCATCTATTTTGGAATGGA 58.595 34.615 1.70 0.00 37.20 3.41
2142 3810 7.636150 AGTTGAGTCATCTATTTTGGAATGG 57.364 36.000 1.70 0.00 0.00 3.16
2171 3839 8.943594 TGACCCAATTTTATACCAAGTTTAGT 57.056 30.769 0.00 0.00 0.00 2.24
2173 3841 9.762381 AGATGACCCAATTTTATACCAAGTTTA 57.238 29.630 0.00 0.00 0.00 2.01
2174 3842 8.664669 AGATGACCCAATTTTATACCAAGTTT 57.335 30.769 0.00 0.00 0.00 2.66
2175 3843 9.936329 ATAGATGACCCAATTTTATACCAAGTT 57.064 29.630 0.00 0.00 0.00 2.66
2176 3844 9.936329 AATAGATGACCCAATTTTATACCAAGT 57.064 29.630 0.00 0.00 0.00 3.16
2180 3848 9.981114 CCAAAATAGATGACCCAATTTTATACC 57.019 33.333 0.00 0.00 31.97 2.73
2184 3852 8.247562 CGTTCCAAAATAGATGACCCAATTTTA 58.752 33.333 0.00 0.00 31.97 1.52
2185 3853 7.096551 CGTTCCAAAATAGATGACCCAATTTT 58.903 34.615 0.00 0.00 33.07 1.82
2186 3854 6.350949 CCGTTCCAAAATAGATGACCCAATTT 60.351 38.462 0.00 0.00 0.00 1.82
2187 3855 5.127031 CCGTTCCAAAATAGATGACCCAATT 59.873 40.000 0.00 0.00 0.00 2.32
2188 3856 4.644685 CCGTTCCAAAATAGATGACCCAAT 59.355 41.667 0.00 0.00 0.00 3.16
2189 3857 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
2190 3858 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
2191 3859 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
2192 3860 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
2193 3861 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
2194 3862 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
2195 3863 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
2196 3864 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
2197 3865 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
2198 3866 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
2199 3867 3.839490 TGTACTCCCTCCGTTCCAAAATA 59.161 43.478 0.00 0.00 0.00 1.40
2200 3868 2.640826 TGTACTCCCTCCGTTCCAAAAT 59.359 45.455 0.00 0.00 0.00 1.82
2201 3869 2.048601 TGTACTCCCTCCGTTCCAAAA 58.951 47.619 0.00 0.00 0.00 2.44
2202 3870 1.719529 TGTACTCCCTCCGTTCCAAA 58.280 50.000 0.00 0.00 0.00 3.28
2203 3871 1.345415 GTTGTACTCCCTCCGTTCCAA 59.655 52.381 0.00 0.00 0.00 3.53
2204 3872 0.971386 GTTGTACTCCCTCCGTTCCA 59.029 55.000 0.00 0.00 0.00 3.53
2205 3873 1.067071 CAGTTGTACTCCCTCCGTTCC 60.067 57.143 0.00 0.00 0.00 3.62
2206 3874 1.891150 TCAGTTGTACTCCCTCCGTTC 59.109 52.381 0.00 0.00 0.00 3.95
2207 3875 1.893801 CTCAGTTGTACTCCCTCCGTT 59.106 52.381 0.00 0.00 0.00 4.44
2208 3876 1.203025 ACTCAGTTGTACTCCCTCCGT 60.203 52.381 0.00 0.00 0.00 4.69
2209 3877 1.202582 CACTCAGTTGTACTCCCTCCG 59.797 57.143 0.00 0.00 0.00 4.63
2210 3878 2.249139 ACACTCAGTTGTACTCCCTCC 58.751 52.381 0.00 0.00 0.00 4.30
2211 3879 4.156373 GTCTACACTCAGTTGTACTCCCTC 59.844 50.000 0.00 0.00 0.00 4.30
2212 3880 4.080687 GTCTACACTCAGTTGTACTCCCT 58.919 47.826 0.00 0.00 0.00 4.20
2213 3881 3.825014 TGTCTACACTCAGTTGTACTCCC 59.175 47.826 0.00 0.00 0.00 4.30
2214 3882 5.449107 TTGTCTACACTCAGTTGTACTCC 57.551 43.478 0.00 0.00 0.00 3.85
2215 3883 4.918583 GCTTGTCTACACTCAGTTGTACTC 59.081 45.833 0.00 0.00 0.00 2.59
2216 3884 4.262079 GGCTTGTCTACACTCAGTTGTACT 60.262 45.833 0.00 0.00 0.00 2.73
2217 3885 3.988517 GGCTTGTCTACACTCAGTTGTAC 59.011 47.826 0.00 0.00 0.00 2.90
2218 3886 3.305131 CGGCTTGTCTACACTCAGTTGTA 60.305 47.826 0.00 0.00 0.00 2.41
2219 3887 2.545952 CGGCTTGTCTACACTCAGTTGT 60.546 50.000 0.00 0.00 0.00 3.32
2220 3888 2.061773 CGGCTTGTCTACACTCAGTTG 58.938 52.381 0.00 0.00 0.00 3.16
2221 3889 1.687123 ACGGCTTGTCTACACTCAGTT 59.313 47.619 0.00 0.00 0.00 3.16
2222 3890 1.329256 ACGGCTTGTCTACACTCAGT 58.671 50.000 0.00 0.00 0.00 3.41
2404 4072 0.329261 AGCAATCACCCTAGCTGCAA 59.671 50.000 1.02 0.00 35.72 4.08
2637 4305 2.329267 CCATGTGCTCCCTATCACCTA 58.671 52.381 0.00 0.00 32.51 3.08
2638 4306 1.135094 CCATGTGCTCCCTATCACCT 58.865 55.000 0.00 0.00 32.51 4.00
2863 4541 2.160721 ATCCTTTCCCGCTAGTCTCA 57.839 50.000 0.00 0.00 0.00 3.27
2872 4550 3.836949 CATTGTTGTGAATCCTTTCCCG 58.163 45.455 0.00 0.00 0.00 5.14
2954 4632 6.682423 TGGTTTGACTGCACATTATCTATG 57.318 37.500 0.00 0.00 40.26 2.23
3069 4747 9.498307 GACAAAACAAGAAAGAGAAATACGAAA 57.502 29.630 0.00 0.00 0.00 3.46
3129 4814 3.128068 ACAGGGACGACAAAACAAGAAAC 59.872 43.478 0.00 0.00 0.00 2.78
3181 4866 6.550163 AGGGAGTAGTTAAGACACTTCAGTA 58.450 40.000 0.00 0.00 0.00 2.74
3579 5264 6.073003 ACGGATGAAAGAATCTTGTTCAGTTC 60.073 38.462 0.00 0.00 34.91 3.01
3636 5321 6.418057 AACAATGTGAATGAGCCCTAAAAA 57.582 33.333 0.00 0.00 0.00 1.94
3637 5322 6.418057 AAACAATGTGAATGAGCCCTAAAA 57.582 33.333 0.00 0.00 0.00 1.52
3638 5323 6.267471 AGAAAACAATGTGAATGAGCCCTAAA 59.733 34.615 0.00 0.00 0.00 1.85
3639 5324 5.774690 AGAAAACAATGTGAATGAGCCCTAA 59.225 36.000 0.00 0.00 0.00 2.69
3640 5325 5.324409 AGAAAACAATGTGAATGAGCCCTA 58.676 37.500 0.00 0.00 0.00 3.53
3641 5326 4.154942 AGAAAACAATGTGAATGAGCCCT 58.845 39.130 0.00 0.00 0.00 5.19
3642 5327 4.525912 AGAAAACAATGTGAATGAGCCC 57.474 40.909 0.00 0.00 0.00 5.19
3643 5328 6.652245 CAAAAGAAAACAATGTGAATGAGCC 58.348 36.000 0.00 0.00 0.00 4.70
3644 5329 6.018507 AGCAAAAGAAAACAATGTGAATGAGC 60.019 34.615 0.00 0.00 0.00 4.26
3645 5330 7.473027 AGCAAAAGAAAACAATGTGAATGAG 57.527 32.000 0.00 0.00 0.00 2.90
3646 5331 7.846644 AAGCAAAAGAAAACAATGTGAATGA 57.153 28.000 0.00 0.00 0.00 2.57
3647 5332 7.044576 GCAAAGCAAAAGAAAACAATGTGAATG 60.045 33.333 0.00 0.00 0.00 2.67
3648 5333 6.968335 GCAAAGCAAAAGAAAACAATGTGAAT 59.032 30.769 0.00 0.00 0.00 2.57
3649 5334 6.072838 TGCAAAGCAAAAGAAAACAATGTGAA 60.073 30.769 0.00 0.00 34.76 3.18
3650 5335 5.410746 TGCAAAGCAAAAGAAAACAATGTGA 59.589 32.000 0.00 0.00 34.76 3.58
3651 5336 5.629097 TGCAAAGCAAAAGAAAACAATGTG 58.371 33.333 0.00 0.00 34.76 3.21
3652 5337 5.163733 CCTGCAAAGCAAAAGAAAACAATGT 60.164 36.000 0.00 0.00 38.41 2.71
3653 5338 5.064962 TCCTGCAAAGCAAAAGAAAACAATG 59.935 36.000 0.00 0.00 38.41 2.82
3654 5339 5.184711 TCCTGCAAAGCAAAAGAAAACAAT 58.815 33.333 0.00 0.00 38.41 2.71
3655 5340 4.573900 TCCTGCAAAGCAAAAGAAAACAA 58.426 34.783 0.00 0.00 38.41 2.83
3656 5341 4.199432 TCCTGCAAAGCAAAAGAAAACA 57.801 36.364 0.00 0.00 38.41 2.83
3657 5342 4.212004 GGATCCTGCAAAGCAAAAGAAAAC 59.788 41.667 3.84 0.00 38.41 2.43
3658 5343 4.141756 TGGATCCTGCAAAGCAAAAGAAAA 60.142 37.500 14.23 0.00 38.41 2.29
4007 5698 7.203255 TCTTCTTTTAAAAGGAAGCTACTGC 57.797 36.000 24.20 0.00 36.67 4.40
4010 5701 7.747155 ACCTCTTCTTTTAAAAGGAAGCTAC 57.253 36.000 24.20 0.00 36.67 3.58
4011 5702 9.856162 TTTACCTCTTCTTTTAAAAGGAAGCTA 57.144 29.630 24.20 12.00 36.67 3.32
4012 5703 8.762481 TTTACCTCTTCTTTTAAAAGGAAGCT 57.238 30.769 24.20 11.22 36.67 3.74
4013 5704 9.464714 CTTTTACCTCTTCTTTTAAAAGGAAGC 57.535 33.333 24.20 0.00 37.66 3.86
4026 5717 6.239915 CCTTACCCACTTCTTTTACCTCTTCT 60.240 42.308 0.00 0.00 0.00 2.85
4046 5737 1.611977 GGTTCAACTGGGTTGCCTTAC 59.388 52.381 5.63 2.38 42.55 2.34
4070 5761 4.093850 CCGTCCCCTTTTTAAAGTCGTATG 59.906 45.833 1.91 0.00 34.20 2.39
4169 5867 5.238583 ACACCAAGCTACAAGAATACTGAC 58.761 41.667 0.00 0.00 0.00 3.51
4183 5881 4.382386 ACAACCCTAATAACACCAAGCT 57.618 40.909 0.00 0.00 0.00 3.74
4296 5995 4.083855 TCTGTAGCACGATCAAAGCAAAAG 60.084 41.667 0.00 0.00 0.00 2.27
4315 6014 3.002656 CGCAATGACAGTGAAAACTCTGT 59.997 43.478 7.16 0.00 0.00 3.41
4329 6029 1.136169 GGGTTTGACGTACGCAATGAC 60.136 52.381 16.72 14.81 0.00 3.06
4333 6033 1.597578 GGGGGTTTGACGTACGCAA 60.598 57.895 16.72 17.04 0.00 4.85
4339 6039 3.819877 GAGCGTGGGGGTTTGACGT 62.820 63.158 0.00 0.00 35.52 4.34
4352 6052 1.079819 CCGTCCATGTGAAGAGCGT 60.080 57.895 0.00 0.00 0.00 5.07
4355 6055 1.811266 CCGCCGTCCATGTGAAGAG 60.811 63.158 0.00 0.00 0.00 2.85
4356 6056 2.264480 CCGCCGTCCATGTGAAGA 59.736 61.111 0.00 0.00 0.00 2.87
4357 6057 3.499737 GCCGCCGTCCATGTGAAG 61.500 66.667 0.00 0.00 0.00 3.02
4385 6085 9.907229 CTTATTTTCAGTTATTTCTAGGACCCT 57.093 33.333 0.00 0.00 0.00 4.34
4397 6097 9.914131 GTTGCTTCCTTTCTTATTTTCAGTTAT 57.086 29.630 0.00 0.00 0.00 1.89
4398 6098 8.073768 CGTTGCTTCCTTTCTTATTTTCAGTTA 58.926 33.333 0.00 0.00 0.00 2.24
4399 6099 6.918022 CGTTGCTTCCTTTCTTATTTTCAGTT 59.082 34.615 0.00 0.00 0.00 3.16
4400 6100 6.262273 TCGTTGCTTCCTTTCTTATTTTCAGT 59.738 34.615 0.00 0.00 0.00 3.41
4401 6101 6.668323 TCGTTGCTTCCTTTCTTATTTTCAG 58.332 36.000 0.00 0.00 0.00 3.02
4402 6102 6.627395 TCGTTGCTTCCTTTCTTATTTTCA 57.373 33.333 0.00 0.00 0.00 2.69
4407 6107 5.449304 CGTTTTCGTTGCTTCCTTTCTTAT 58.551 37.500 0.00 0.00 38.65 1.73
4412 6112 1.746787 ACCGTTTTCGTTGCTTCCTTT 59.253 42.857 0.00 0.00 42.35 3.11
4415 6115 2.413634 CCATACCGTTTTCGTTGCTTCC 60.414 50.000 0.00 0.00 42.35 3.46
4429 6129 3.244526 TGGGATGATCATTGTCCATACCG 60.245 47.826 10.14 0.00 42.81 4.02
4430 6130 4.330250 CTGGGATGATCATTGTCCATACC 58.670 47.826 19.72 10.63 40.81 2.73
4432 6132 3.395273 TGCTGGGATGATCATTGTCCATA 59.605 43.478 19.72 12.80 33.62 2.74
4433 6133 2.176148 TGCTGGGATGATCATTGTCCAT 59.824 45.455 19.72 0.00 33.62 3.41
4434 6134 1.565288 TGCTGGGATGATCATTGTCCA 59.435 47.619 10.14 15.81 33.62 4.02
4437 6139 3.825014 GCTATTGCTGGGATGATCATTGT 59.175 43.478 10.14 0.00 36.03 2.71
4441 6143 1.879372 GCGCTATTGCTGGGATGATCA 60.879 52.381 0.00 0.00 36.97 2.92
4487 6189 0.604780 GCACAGCAGAAGAAGCAGGA 60.605 55.000 0.00 0.00 0.00 3.86
4498 6200 0.673022 GAAGGTCTGAGGCACAGCAG 60.673 60.000 7.09 0.00 45.38 4.24
4714 6416 2.676471 GTGAAGGGCAATGGCGGT 60.676 61.111 0.00 0.00 42.47 5.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.