Multiple sequence alignment - TraesCS1A01G198800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G198800 chr1A 100.000 4552 0 0 1 4552 357124888 357120337 0.000000e+00 8407.0
1 TraesCS1A01G198800 chr1D 89.730 1743 127 23 2848 4552 285555327 285553599 0.000000e+00 2180.0
2 TraesCS1A01G198800 chr1D 88.774 1256 65 35 772 1987 285556558 285555339 0.000000e+00 1469.0
3 TraesCS1A01G198800 chr1D 89.052 749 65 13 2032 2775 467029221 467028485 0.000000e+00 913.0
4 TraesCS1A01G198800 chr1D 84.961 512 52 9 2034 2545 462155920 462156406 3.160000e-136 496.0
5 TraesCS1A01G198800 chr1B 90.007 1531 124 14 3037 4552 388145258 388143742 0.000000e+00 1953.0
6 TraesCS1A01G198800 chr1B 90.921 771 34 22 772 1535 388147006 388146265 0.000000e+00 1003.0
7 TraesCS1A01G198800 chr1B 88.485 330 26 8 1660 1978 388146204 388145876 5.520000e-104 388.0
8 TraesCS1A01G198800 chr1B 86.986 146 14 4 2860 3000 388145573 388145428 4.710000e-35 159.0
9 TraesCS1A01G198800 chr1B 96.970 33 1 0 3003 3035 388145409 388145377 6.360000e-04 56.5
10 TraesCS1A01G198800 chr5B 82.763 818 102 30 2034 2846 609608538 609607755 0.000000e+00 693.0
11 TraesCS1A01G198800 chr5D 90.522 517 43 3 2034 2550 435347150 435346640 0.000000e+00 678.0
12 TraesCS1A01G198800 chr5D 81.165 738 101 22 2029 2749 385450607 385449891 3.980000e-155 558.0
13 TraesCS1A01G198800 chr5D 91.765 85 7 0 1381 1465 393442205 393442121 8.000000e-23 119.0
14 TraesCS1A01G198800 chr2B 89.382 518 47 5 2031 2542 719496112 719495597 0.000000e+00 645.0
15 TraesCS1A01G198800 chrUn 87.726 554 57 8 2049 2599 7641780 7642325 1.790000e-178 636.0
16 TraesCS1A01G198800 chr7D 87.616 541 66 1 1 540 628135035 628134495 1.080000e-175 627.0
17 TraesCS1A01G198800 chr7D 86.654 532 66 5 1 529 199080569 199081098 6.560000e-163 584.0
18 TraesCS1A01G198800 chr7D 86.200 529 65 5 2 529 515486698 515487219 2.380000e-157 566.0
19 TraesCS1A01G198800 chr7B 87.246 541 68 1 1 540 104298871 104298331 2.330000e-172 616.0
20 TraesCS1A01G198800 chr7B 87.595 524 39 12 2028 2550 408908801 408909299 6.560000e-163 584.0
21 TraesCS1A01G198800 chr7B 88.976 127 14 0 1339 1465 603522789 603522663 1.700000e-34 158.0
22 TraesCS1A01G198800 chr5A 85.740 547 69 8 1 541 383190034 383189491 1.840000e-158 569.0
23 TraesCS1A01G198800 chr5A 85.294 544 77 3 1 542 1773978 1773436 3.980000e-155 558.0
24 TraesCS1A01G198800 chr5A 100.000 29 0 0 2827 2855 398057654 398057682 2.000000e-03 54.7
25 TraesCS1A01G198800 chr6D 85.505 545 73 5 1 541 20134557 20135099 8.550000e-157 564.0
26 TraesCS1A01G198800 chr6D 85.246 122 13 5 2739 2856 49447994 49447874 2.220000e-23 121.0
27 TraesCS1A01G198800 chr6B 85.451 543 77 2 1 541 518676781 518677323 8.550000e-157 564.0
28 TraesCS1A01G198800 chr6B 78.713 855 120 38 2031 2859 38005024 38004206 8.730000e-142 514.0
29 TraesCS1A01G198800 chr4A 85.219 548 75 6 1 544 571740928 571741473 3.980000e-155 558.0
30 TraesCS1A01G198800 chr4A 89.728 331 30 4 2032 2361 584030112 584029785 1.960000e-113 420.0
31 TraesCS1A01G198800 chr3B 90.000 110 11 0 1351 1460 775129794 775129685 4.750000e-30 143.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G198800 chr1A 357120337 357124888 4551 True 8407.0 8407 100.0000 1 4552 1 chr1A.!!$R1 4551
1 TraesCS1A01G198800 chr1D 285553599 285556558 2959 True 1824.5 2180 89.2520 772 4552 2 chr1D.!!$R2 3780
2 TraesCS1A01G198800 chr1D 467028485 467029221 736 True 913.0 913 89.0520 2032 2775 1 chr1D.!!$R1 743
3 TraesCS1A01G198800 chr1B 388143742 388147006 3264 True 711.9 1953 90.6738 772 4552 5 chr1B.!!$R1 3780
4 TraesCS1A01G198800 chr5B 609607755 609608538 783 True 693.0 693 82.7630 2034 2846 1 chr5B.!!$R1 812
5 TraesCS1A01G198800 chr5D 435346640 435347150 510 True 678.0 678 90.5220 2034 2550 1 chr5D.!!$R3 516
6 TraesCS1A01G198800 chr5D 385449891 385450607 716 True 558.0 558 81.1650 2029 2749 1 chr5D.!!$R1 720
7 TraesCS1A01G198800 chr2B 719495597 719496112 515 True 645.0 645 89.3820 2031 2542 1 chr2B.!!$R1 511
8 TraesCS1A01G198800 chrUn 7641780 7642325 545 False 636.0 636 87.7260 2049 2599 1 chrUn.!!$F1 550
9 TraesCS1A01G198800 chr7D 628134495 628135035 540 True 627.0 627 87.6160 1 540 1 chr7D.!!$R1 539
10 TraesCS1A01G198800 chr7D 199080569 199081098 529 False 584.0 584 86.6540 1 529 1 chr7D.!!$F1 528
11 TraesCS1A01G198800 chr7D 515486698 515487219 521 False 566.0 566 86.2000 2 529 1 chr7D.!!$F2 527
12 TraesCS1A01G198800 chr7B 104298331 104298871 540 True 616.0 616 87.2460 1 540 1 chr7B.!!$R1 539
13 TraesCS1A01G198800 chr5A 383189491 383190034 543 True 569.0 569 85.7400 1 541 1 chr5A.!!$R2 540
14 TraesCS1A01G198800 chr5A 1773436 1773978 542 True 558.0 558 85.2940 1 542 1 chr5A.!!$R1 541
15 TraesCS1A01G198800 chr6D 20134557 20135099 542 False 564.0 564 85.5050 1 541 1 chr6D.!!$F1 540
16 TraesCS1A01G198800 chr6B 518676781 518677323 542 False 564.0 564 85.4510 1 541 1 chr6B.!!$F1 540
17 TraesCS1A01G198800 chr6B 38004206 38005024 818 True 514.0 514 78.7130 2031 2859 1 chr6B.!!$R1 828
18 TraesCS1A01G198800 chr4A 571740928 571741473 545 False 558.0 558 85.2190 1 544 1 chr4A.!!$F1 543

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
603 612 0.029700 TCGACACGCTTCTCGACAAA 59.970 50.0 0.00 0.0 41.67 2.83 F
761 770 0.035458 GCTGGTGCTGTTAGTCAGGT 59.965 55.0 0.00 0.0 43.78 4.00 F
1632 1670 0.043183 TCTCCAAGGGGATCAGAGCA 59.957 55.0 0.00 0.0 43.91 4.26 F
2729 2875 0.111061 TCAGGATGTTTGCAGTGCCT 59.889 50.0 13.72 0.0 37.40 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1775 1815 0.298707 CGACGTGCTATGCATCACAC 59.701 55.0 17.78 17.78 41.91 3.82 R
2710 2855 0.111061 AGGCACTGCAAACATCCTGA 59.889 50.0 2.82 0.00 37.18 3.86 R
3489 4056 0.098376 GCTGAGAATGCGAGGCAAAG 59.902 55.0 0.00 0.00 43.62 2.77 R
3944 4513 0.172803 GTGACTGCCCGAGATTACGT 59.827 55.0 0.00 0.00 0.00 3.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 45 2.159382 AGGGCTCCGTTTTTACATGTG 58.841 47.619 9.11 0.00 0.00 3.21
125 133 8.267894 TCCTTAAAGATGGAATAAGGTTCTCTG 58.732 37.037 9.84 0.00 43.94 3.35
250 258 7.542534 TGTAGTTCGTCTATGTTTGTGTTTT 57.457 32.000 0.00 0.00 0.00 2.43
297 305 1.153745 ACTCTTCATCAGCGACGGC 60.154 57.895 0.00 0.00 40.37 5.68
349 357 1.028330 TAGCACGACGACTTCCCGAT 61.028 55.000 0.00 0.00 0.00 4.18
385 393 5.124776 ACAAGTTTTGTTCGATTCTGGTGAA 59.875 36.000 0.00 0.00 42.22 3.18
393 401 1.290134 GATTCTGGTGAAGGAGGGGT 58.710 55.000 0.00 0.00 35.44 4.95
406 414 3.771160 GGGGTGATGACGACGGCT 61.771 66.667 0.65 0.00 0.00 5.52
440 449 3.005897 ACTTCAGTGCTTGTAGTCGTCAT 59.994 43.478 0.00 0.00 32.61 3.06
561 570 7.923414 AAAAGAGGGAGTACATGTAAATGTC 57.077 36.000 7.25 2.50 36.08 3.06
562 571 5.615925 AGAGGGAGTACATGTAAATGTCC 57.384 43.478 7.25 10.99 36.08 4.02
563 572 5.281314 AGAGGGAGTACATGTAAATGTCCT 58.719 41.667 7.25 10.13 36.08 3.85
564 573 5.726793 AGAGGGAGTACATGTAAATGTCCTT 59.273 40.000 7.25 7.97 36.08 3.36
565 574 6.215636 AGAGGGAGTACATGTAAATGTCCTTT 59.784 38.462 7.25 3.67 36.08 3.11
566 575 6.180472 AGGGAGTACATGTAAATGTCCTTTG 58.820 40.000 7.25 0.00 36.08 2.77
567 576 5.163652 GGGAGTACATGTAAATGTCCTTTGC 60.164 44.000 7.25 0.00 36.08 3.68
568 577 5.648092 GGAGTACATGTAAATGTCCTTTGCT 59.352 40.000 7.25 0.00 36.08 3.91
569 578 6.151144 GGAGTACATGTAAATGTCCTTTGCTT 59.849 38.462 7.25 0.00 36.08 3.91
570 579 7.309194 GGAGTACATGTAAATGTCCTTTGCTTT 60.309 37.037 7.25 0.00 36.08 3.51
571 580 7.593825 AGTACATGTAAATGTCCTTTGCTTTC 58.406 34.615 7.25 0.00 36.08 2.62
572 581 5.783111 ACATGTAAATGTCCTTTGCTTTCC 58.217 37.500 0.00 0.00 31.40 3.13
573 582 5.304101 ACATGTAAATGTCCTTTGCTTTCCA 59.696 36.000 0.00 0.00 31.40 3.53
574 583 6.014327 ACATGTAAATGTCCTTTGCTTTCCAT 60.014 34.615 0.00 0.00 31.40 3.41
575 584 6.024552 TGTAAATGTCCTTTGCTTTCCATC 57.975 37.500 0.00 0.00 31.40 3.51
576 585 4.541973 AAATGTCCTTTGCTTTCCATCC 57.458 40.909 0.00 0.00 0.00 3.51
577 586 2.978156 TGTCCTTTGCTTTCCATCCT 57.022 45.000 0.00 0.00 0.00 3.24
578 587 4.591321 ATGTCCTTTGCTTTCCATCCTA 57.409 40.909 0.00 0.00 0.00 2.94
579 588 4.380843 TGTCCTTTGCTTTCCATCCTAA 57.619 40.909 0.00 0.00 0.00 2.69
580 589 4.934356 TGTCCTTTGCTTTCCATCCTAAT 58.066 39.130 0.00 0.00 0.00 1.73
581 590 6.073447 TGTCCTTTGCTTTCCATCCTAATA 57.927 37.500 0.00 0.00 0.00 0.98
582 591 6.672593 TGTCCTTTGCTTTCCATCCTAATAT 58.327 36.000 0.00 0.00 0.00 1.28
583 592 7.811282 TGTCCTTTGCTTTCCATCCTAATATA 58.189 34.615 0.00 0.00 0.00 0.86
584 593 8.448008 TGTCCTTTGCTTTCCATCCTAATATAT 58.552 33.333 0.00 0.00 0.00 0.86
585 594 8.951243 GTCCTTTGCTTTCCATCCTAATATATC 58.049 37.037 0.00 0.00 0.00 1.63
586 595 7.824289 TCCTTTGCTTTCCATCCTAATATATCG 59.176 37.037 0.00 0.00 0.00 2.92
587 596 7.824289 CCTTTGCTTTCCATCCTAATATATCGA 59.176 37.037 0.00 0.00 0.00 3.59
588 597 8.547967 TTTGCTTTCCATCCTAATATATCGAC 57.452 34.615 0.00 0.00 0.00 4.20
589 598 7.239763 TGCTTTCCATCCTAATATATCGACA 57.760 36.000 0.00 0.00 0.00 4.35
590 599 7.097192 TGCTTTCCATCCTAATATATCGACAC 58.903 38.462 0.00 0.00 0.00 3.67
591 600 6.253727 GCTTTCCATCCTAATATATCGACACG 59.746 42.308 0.00 0.00 0.00 4.49
592 601 5.244785 TCCATCCTAATATATCGACACGC 57.755 43.478 0.00 0.00 0.00 5.34
593 602 4.948004 TCCATCCTAATATATCGACACGCT 59.052 41.667 0.00 0.00 0.00 5.07
594 603 5.417894 TCCATCCTAATATATCGACACGCTT 59.582 40.000 0.00 0.00 0.00 4.68
595 604 5.744345 CCATCCTAATATATCGACACGCTTC 59.256 44.000 0.00 0.00 0.00 3.86
596 605 6.404844 CCATCCTAATATATCGACACGCTTCT 60.405 42.308 0.00 0.00 0.00 2.85
597 606 6.179504 TCCTAATATATCGACACGCTTCTC 57.820 41.667 0.00 0.00 0.00 2.87
598 607 5.022653 CCTAATATATCGACACGCTTCTCG 58.977 45.833 0.00 0.00 45.38 4.04
599 608 4.744136 AATATATCGACACGCTTCTCGA 57.256 40.909 0.00 0.00 42.79 4.04
600 609 2.386501 ATATCGACACGCTTCTCGAC 57.613 50.000 0.00 0.00 41.50 4.20
601 610 1.081094 TATCGACACGCTTCTCGACA 58.919 50.000 0.00 0.00 41.50 4.35
602 611 0.240145 ATCGACACGCTTCTCGACAA 59.760 50.000 0.00 0.00 41.50 3.18
603 612 0.029700 TCGACACGCTTCTCGACAAA 59.970 50.000 0.00 0.00 41.67 2.83
604 613 0.850217 CGACACGCTTCTCGACAAAA 59.150 50.000 0.00 0.00 41.67 2.44
605 614 1.256895 CGACACGCTTCTCGACAAAAA 59.743 47.619 0.00 0.00 41.67 1.94
628 637 2.193306 GTTGGAGCCAACGCATTATG 57.807 50.000 15.85 0.00 45.24 1.90
629 638 1.742831 GTTGGAGCCAACGCATTATGA 59.257 47.619 15.85 0.00 45.24 2.15
630 639 2.346766 TGGAGCCAACGCATTATGAT 57.653 45.000 0.00 0.00 37.52 2.45
631 640 1.948834 TGGAGCCAACGCATTATGATG 59.051 47.619 0.00 0.00 37.52 3.07
632 641 1.949525 GGAGCCAACGCATTATGATGT 59.050 47.619 0.00 0.00 37.52 3.06
633 642 2.358898 GGAGCCAACGCATTATGATGTT 59.641 45.455 0.00 0.00 37.52 2.71
634 643 3.181487 GGAGCCAACGCATTATGATGTTT 60.181 43.478 0.00 0.00 37.52 2.83
635 644 3.772932 AGCCAACGCATTATGATGTTTG 58.227 40.909 0.00 3.73 37.52 2.93
636 645 3.193267 AGCCAACGCATTATGATGTTTGT 59.807 39.130 0.00 0.00 37.52 2.83
637 646 3.547468 GCCAACGCATTATGATGTTTGTC 59.453 43.478 0.00 0.00 35.63 3.18
638 647 4.675146 GCCAACGCATTATGATGTTTGTCT 60.675 41.667 0.00 0.00 35.63 3.41
639 648 5.030295 CCAACGCATTATGATGTTTGTCTC 58.970 41.667 0.00 0.00 35.63 3.36
640 649 5.163723 CCAACGCATTATGATGTTTGTCTCT 60.164 40.000 0.00 0.00 35.63 3.10
641 650 6.317088 CAACGCATTATGATGTTTGTCTCTT 58.683 36.000 0.00 0.00 35.63 2.85
642 651 6.111768 ACGCATTATGATGTTTGTCTCTTC 57.888 37.500 0.00 0.00 35.63 2.87
643 652 5.193216 CGCATTATGATGTTTGTCTCTTCG 58.807 41.667 0.00 0.00 35.63 3.79
644 653 5.005682 CGCATTATGATGTTTGTCTCTTCGA 59.994 40.000 0.00 0.00 35.63 3.71
645 654 6.188175 GCATTATGATGTTTGTCTCTTCGAC 58.812 40.000 0.00 0.00 38.08 4.20
646 655 6.709643 CATTATGATGTTTGTCTCTTCGACC 58.290 40.000 0.00 0.00 42.13 4.79
647 656 3.744238 TGATGTTTGTCTCTTCGACCA 57.256 42.857 0.00 0.00 42.13 4.02
648 657 3.390135 TGATGTTTGTCTCTTCGACCAC 58.610 45.455 0.00 0.00 42.13 4.16
649 658 1.847818 TGTTTGTCTCTTCGACCACG 58.152 50.000 0.00 0.00 42.13 4.94
650 659 0.507358 GTTTGTCTCTTCGACCACGC 59.493 55.000 0.00 0.00 42.13 5.34
651 660 0.599204 TTTGTCTCTTCGACCACGCC 60.599 55.000 0.00 0.00 42.13 5.68
652 661 1.740332 TTGTCTCTTCGACCACGCCA 61.740 55.000 0.00 0.00 42.13 5.69
653 662 1.006571 GTCTCTTCGACCACGCCAA 60.007 57.895 0.00 0.00 39.58 4.52
654 663 1.006571 TCTCTTCGACCACGCCAAC 60.007 57.895 0.00 0.00 39.58 3.77
655 664 1.006102 CTCTTCGACCACGCCAACT 60.006 57.895 0.00 0.00 39.58 3.16
656 665 1.006571 TCTTCGACCACGCCAACTC 60.007 57.895 0.00 0.00 39.58 3.01
657 666 1.300620 CTTCGACCACGCCAACTCA 60.301 57.895 0.00 0.00 39.58 3.41
658 667 0.878523 CTTCGACCACGCCAACTCAA 60.879 55.000 0.00 0.00 39.58 3.02
659 668 0.878523 TTCGACCACGCCAACTCAAG 60.879 55.000 0.00 0.00 39.58 3.02
660 669 2.317609 CGACCACGCCAACTCAAGG 61.318 63.158 0.00 0.00 0.00 3.61
666 675 3.854856 GCCAACTCAAGGCCAACA 58.145 55.556 5.01 0.00 46.50 3.33
667 676 2.354902 GCCAACTCAAGGCCAACAT 58.645 52.632 5.01 0.00 46.50 2.71
668 677 0.681175 GCCAACTCAAGGCCAACATT 59.319 50.000 5.01 0.00 46.50 2.71
669 678 1.892474 GCCAACTCAAGGCCAACATTA 59.108 47.619 5.01 0.00 46.50 1.90
670 679 2.497273 GCCAACTCAAGGCCAACATTAT 59.503 45.455 5.01 0.00 46.50 1.28
671 680 3.699038 GCCAACTCAAGGCCAACATTATA 59.301 43.478 5.01 0.00 46.50 0.98
672 681 4.440112 GCCAACTCAAGGCCAACATTATAC 60.440 45.833 5.01 0.00 46.50 1.47
673 682 4.949856 CCAACTCAAGGCCAACATTATACT 59.050 41.667 5.01 0.00 0.00 2.12
674 683 6.119536 CCAACTCAAGGCCAACATTATACTA 58.880 40.000 5.01 0.00 0.00 1.82
675 684 6.260936 CCAACTCAAGGCCAACATTATACTAG 59.739 42.308 5.01 0.00 0.00 2.57
676 685 6.561519 ACTCAAGGCCAACATTATACTAGT 57.438 37.500 5.01 0.00 0.00 2.57
677 686 7.670605 ACTCAAGGCCAACATTATACTAGTA 57.329 36.000 5.01 4.77 0.00 1.82
678 687 8.263854 ACTCAAGGCCAACATTATACTAGTAT 57.736 34.615 19.07 19.07 0.00 2.12
679 688 9.375974 ACTCAAGGCCAACATTATACTAGTATA 57.624 33.333 17.03 17.03 0.00 1.47
682 691 9.944376 CAAGGCCAACATTATACTAGTATATGT 57.056 33.333 20.67 20.64 0.00 2.29
689 698 9.745880 AACATTATACTAGTATATGTATGGCGC 57.254 33.333 24.16 0.00 32.42 6.53
690 699 8.909923 ACATTATACTAGTATATGTATGGCGCA 58.090 33.333 24.16 10.23 32.42 6.09
691 700 9.914131 CATTATACTAGTATATGTATGGCGCAT 57.086 33.333 20.67 6.93 32.42 4.73
695 704 7.582667 ACTAGTATATGTATGGCGCATATGA 57.417 36.000 10.83 0.00 39.19 2.15
696 705 7.426410 ACTAGTATATGTATGGCGCATATGAC 58.574 38.462 10.83 0.00 39.19 3.06
697 706 6.471233 AGTATATGTATGGCGCATATGACT 57.529 37.500 10.83 5.58 39.19 3.41
698 707 6.276091 AGTATATGTATGGCGCATATGACTG 58.724 40.000 10.83 0.00 39.19 3.51
699 708 3.683365 ATGTATGGCGCATATGACTGA 57.317 42.857 10.83 0.00 0.00 3.41
700 709 3.467374 TGTATGGCGCATATGACTGAA 57.533 42.857 10.83 0.00 0.00 3.02
701 710 3.802866 TGTATGGCGCATATGACTGAAA 58.197 40.909 10.83 0.00 0.00 2.69
702 711 3.559655 TGTATGGCGCATATGACTGAAAC 59.440 43.478 10.83 0.00 0.00 2.78
703 712 1.378531 TGGCGCATATGACTGAAACC 58.621 50.000 10.83 0.00 0.00 3.27
704 713 1.065491 TGGCGCATATGACTGAAACCT 60.065 47.619 10.83 0.00 0.00 3.50
705 714 1.599542 GGCGCATATGACTGAAACCTC 59.400 52.381 10.83 0.00 0.00 3.85
706 715 2.279741 GCGCATATGACTGAAACCTCA 58.720 47.619 6.97 0.00 0.00 3.86
707 716 2.677836 GCGCATATGACTGAAACCTCAA 59.322 45.455 6.97 0.00 0.00 3.02
708 717 3.242543 GCGCATATGACTGAAACCTCAAG 60.243 47.826 6.97 0.00 0.00 3.02
709 718 3.310774 CGCATATGACTGAAACCTCAAGG 59.689 47.826 6.97 0.00 42.17 3.61
722 731 2.555199 CCTCAAGGTAAGCCATTCTCG 58.445 52.381 0.00 0.00 37.19 4.04
723 732 2.168521 CCTCAAGGTAAGCCATTCTCGA 59.831 50.000 0.00 0.00 37.19 4.04
724 733 3.369471 CCTCAAGGTAAGCCATTCTCGAA 60.369 47.826 0.00 0.00 37.19 3.71
725 734 4.253685 CTCAAGGTAAGCCATTCTCGAAA 58.746 43.478 0.00 0.00 37.19 3.46
726 735 4.647611 TCAAGGTAAGCCATTCTCGAAAA 58.352 39.130 0.00 0.00 37.19 2.29
727 736 5.067273 TCAAGGTAAGCCATTCTCGAAAAA 58.933 37.500 0.00 0.00 37.19 1.94
749 758 4.773323 AAAACTCAAGATAAGCTGGTGC 57.227 40.909 0.00 0.00 40.05 5.01
760 769 2.846371 GCTGGTGCTGTTAGTCAGG 58.154 57.895 0.00 0.00 43.78 3.86
761 770 0.035458 GCTGGTGCTGTTAGTCAGGT 59.965 55.000 0.00 0.00 43.78 4.00
762 771 1.941668 GCTGGTGCTGTTAGTCAGGTC 60.942 57.143 0.00 0.00 43.78 3.85
763 772 1.620819 CTGGTGCTGTTAGTCAGGTCT 59.379 52.381 0.00 0.00 43.78 3.85
764 773 2.826128 CTGGTGCTGTTAGTCAGGTCTA 59.174 50.000 0.00 0.00 43.78 2.59
765 774 2.826128 TGGTGCTGTTAGTCAGGTCTAG 59.174 50.000 0.00 0.00 43.78 2.43
766 775 2.826725 GGTGCTGTTAGTCAGGTCTAGT 59.173 50.000 0.00 0.00 43.78 2.57
767 776 4.015084 GGTGCTGTTAGTCAGGTCTAGTA 58.985 47.826 0.00 0.00 43.78 1.82
768 777 4.096682 GGTGCTGTTAGTCAGGTCTAGTAG 59.903 50.000 0.00 0.00 43.78 2.57
769 778 4.701171 GTGCTGTTAGTCAGGTCTAGTAGT 59.299 45.833 0.00 0.00 43.78 2.73
770 779 5.879223 GTGCTGTTAGTCAGGTCTAGTAGTA 59.121 44.000 0.00 0.00 43.78 1.82
781 790 8.684520 GTCAGGTCTAGTAGTAGCATTTTCTTA 58.315 37.037 0.00 0.00 0.00 2.10
797 806 8.624776 GCATTTTCTTAATGTAACCTAGCTCAT 58.375 33.333 0.00 0.00 0.00 2.90
876 887 3.807622 TCGCTGTATAATAACTTGCCAGC 59.192 43.478 0.00 0.00 40.20 4.85
890 901 3.673484 CAGCAGGCACCAAACCGG 61.673 66.667 0.00 0.00 42.50 5.28
920 935 1.726791 CGATCCAACTGAACTGAACCG 59.273 52.381 0.00 0.00 0.00 4.44
963 979 1.026718 AAATCCAAGAAGCCTCGCGG 61.027 55.000 6.13 0.00 0.00 6.46
964 980 2.185310 AATCCAAGAAGCCTCGCGGT 62.185 55.000 6.13 0.00 0.00 5.68
965 981 2.579684 ATCCAAGAAGCCTCGCGGTC 62.580 60.000 6.13 0.00 0.00 4.79
966 982 3.181967 CAAGAAGCCTCGCGGTCG 61.182 66.667 6.13 0.00 0.00 4.79
985 1001 2.082366 CGTACGTTCGTTCCCACCG 61.082 63.158 7.22 0.00 0.00 4.94
1217 1233 4.717629 CGAGCACGGCGACTGGAA 62.718 66.667 16.62 0.00 35.72 3.53
1252 1268 2.603473 AGGAGTACAGGTGCGCCA 60.603 61.111 20.59 0.00 37.59 5.69
1253 1269 1.961180 GAGGAGTACAGGTGCGCCAT 61.961 60.000 20.59 8.81 37.59 4.40
1254 1270 1.815421 GGAGTACAGGTGCGCCATG 60.815 63.158 20.59 15.75 35.44 3.66
1255 1271 2.436646 AGTACAGGTGCGCCATGC 60.437 61.111 20.59 9.83 46.70 4.06
1257 1273 4.027173 TACAGGTGCGCCATGCCA 62.027 61.111 20.59 3.16 45.60 4.92
1258 1274 3.559511 TACAGGTGCGCCATGCCAA 62.560 57.895 20.59 1.12 45.60 4.52
1259 1275 4.424566 CAGGTGCGCCATGCCAAC 62.425 66.667 20.59 0.00 45.60 3.77
1260 1276 4.666253 AGGTGCGCCATGCCAACT 62.666 61.111 20.59 0.00 45.60 3.16
1262 1278 4.120331 GTGCGCCATGCCAACTCC 62.120 66.667 4.18 0.00 45.60 3.85
1418 1456 1.269166 CGTTCATCTACACCACGCTC 58.731 55.000 0.00 0.00 0.00 5.03
1484 1522 4.711949 AGCAAGGTCGGCCTGCTG 62.712 66.667 25.57 16.30 46.33 4.41
1584 1622 5.044428 CAATTCTTGTTGCTTCTCTCTGG 57.956 43.478 0.00 0.00 0.00 3.86
1608 1646 3.179443 TTGTCTCAGACAAGTGTCACC 57.821 47.619 16.67 0.00 45.88 4.02
1612 1650 6.427061 TTGTCTCAGACAAGTGTCACCATTG 61.427 44.000 16.67 1.38 45.88 2.82
1617 1655 2.808543 GACAAGTGTCACCATTGTCTCC 59.191 50.000 21.96 5.61 45.91 3.71
1626 1664 2.355010 CCATTGTCTCCAAGGGGATC 57.645 55.000 0.00 0.00 46.36 3.36
1628 1666 2.422519 CCATTGTCTCCAAGGGGATCAG 60.423 54.545 0.00 0.00 46.36 2.90
1629 1667 2.342406 TTGTCTCCAAGGGGATCAGA 57.658 50.000 0.00 0.00 43.91 3.27
1630 1668 1.871418 TGTCTCCAAGGGGATCAGAG 58.129 55.000 0.00 0.00 43.91 3.35
1631 1669 0.467804 GTCTCCAAGGGGATCAGAGC 59.532 60.000 0.00 0.00 43.91 4.09
1632 1670 0.043183 TCTCCAAGGGGATCAGAGCA 59.957 55.000 0.00 0.00 43.91 4.26
1633 1671 1.138568 CTCCAAGGGGATCAGAGCAT 58.861 55.000 0.00 0.00 43.91 3.79
1634 1672 2.090550 TCTCCAAGGGGATCAGAGCATA 60.091 50.000 0.00 0.00 43.91 3.14
1635 1673 2.707791 CTCCAAGGGGATCAGAGCATAA 59.292 50.000 0.00 0.00 43.91 1.90
1636 1674 2.707791 TCCAAGGGGATCAGAGCATAAG 59.292 50.000 0.00 0.00 38.64 1.73
1637 1675 2.502295 CAAGGGGATCAGAGCATAAGC 58.498 52.381 0.00 0.00 42.56 3.09
1638 1676 1.811778 AGGGGATCAGAGCATAAGCA 58.188 50.000 0.00 0.00 45.49 3.91
1639 1677 2.130193 AGGGGATCAGAGCATAAGCAA 58.870 47.619 0.00 0.00 45.49 3.91
1640 1678 2.511218 AGGGGATCAGAGCATAAGCAAA 59.489 45.455 0.00 0.00 45.49 3.68
1641 1679 3.053395 AGGGGATCAGAGCATAAGCAAAA 60.053 43.478 0.00 0.00 45.49 2.44
1642 1680 3.893813 GGGGATCAGAGCATAAGCAAAAT 59.106 43.478 0.00 0.00 45.49 1.82
1643 1681 4.343239 GGGGATCAGAGCATAAGCAAAATT 59.657 41.667 0.00 0.00 45.49 1.82
1644 1682 5.536161 GGGGATCAGAGCATAAGCAAAATTA 59.464 40.000 0.00 0.00 45.49 1.40
1645 1683 6.442112 GGGATCAGAGCATAAGCAAAATTAC 58.558 40.000 0.00 0.00 45.49 1.89
1646 1684 6.264067 GGGATCAGAGCATAAGCAAAATTACT 59.736 38.462 0.00 0.00 45.49 2.24
1647 1685 7.201857 GGGATCAGAGCATAAGCAAAATTACTT 60.202 37.037 0.00 0.00 45.49 2.24
1648 1686 7.646922 GGATCAGAGCATAAGCAAAATTACTTG 59.353 37.037 0.00 0.00 45.49 3.16
1649 1687 7.686438 TCAGAGCATAAGCAAAATTACTTGA 57.314 32.000 0.00 0.00 45.49 3.02
1650 1688 8.109705 TCAGAGCATAAGCAAAATTACTTGAA 57.890 30.769 0.00 0.00 45.49 2.69
1651 1689 8.023128 TCAGAGCATAAGCAAAATTACTTGAAC 58.977 33.333 0.00 0.00 45.49 3.18
1652 1690 7.809331 CAGAGCATAAGCAAAATTACTTGAACA 59.191 33.333 0.00 0.00 45.49 3.18
1653 1691 8.359642 AGAGCATAAGCAAAATTACTTGAACAA 58.640 29.630 0.00 0.00 45.49 2.83
1654 1692 9.143631 GAGCATAAGCAAAATTACTTGAACAAT 57.856 29.630 0.00 0.00 45.49 2.71
1674 1712 9.358872 GAACAATAGGAATAGGAAAAGCAAAAG 57.641 33.333 0.00 0.00 0.00 2.27
1688 1726 9.489084 GGAAAAGCAAAAGATACTGGTAATTTT 57.511 29.630 0.00 0.00 0.00 1.82
1695 1733 9.203421 CAAAAGATACTGGTAATTTTGGTTTCC 57.797 33.333 17.38 0.00 35.02 3.13
1696 1734 7.476540 AAGATACTGGTAATTTTGGTTTCCC 57.523 36.000 0.00 0.00 0.00 3.97
1700 1738 4.650131 ACTGGTAATTTTGGTTTCCCGAAA 59.350 37.500 0.00 0.00 46.03 3.46
1701 1739 5.128991 ACTGGTAATTTTGGTTTCCCGAAAA 59.871 36.000 0.00 0.00 45.29 2.29
1707 1745 4.329462 TTTGGTTTCCCGAAAATTCTGG 57.671 40.909 0.00 0.00 30.71 3.86
1712 1750 1.378531 TCCCGAAAATTCTGGATGCG 58.621 50.000 2.57 0.00 35.94 4.73
1716 1754 1.468520 CGAAAATTCTGGATGCGTGGT 59.531 47.619 0.00 0.00 0.00 4.16
1731 1769 3.634910 TGCGTGGTAGAGTATATTGCTCA 59.365 43.478 8.92 0.00 35.55 4.26
1743 1783 7.284034 AGAGTATATTGCTCATTGAGGGTTTTG 59.716 37.037 15.28 0.00 35.55 2.44
1754 1794 1.954382 GAGGGTTTTGAGTTGGTGGTC 59.046 52.381 0.00 0.00 0.00 4.02
1768 1808 2.247358 GGTGGTCAATTTGGTGGATGT 58.753 47.619 0.00 0.00 0.00 3.06
1775 1815 3.256383 TCAATTTGGTGGATGTGAAGCTG 59.744 43.478 0.00 0.00 0.00 4.24
1815 1855 3.245284 CGTCAGGGACAATTGTTATAGCG 59.755 47.826 13.36 9.74 32.09 4.26
1840 1882 9.179909 CGTACAGATAGAGATAGGTGGATTATT 57.820 37.037 0.00 0.00 0.00 1.40
1910 1953 8.997621 TTCTTCAGCTAATTTATTGTACTCGT 57.002 30.769 0.00 0.00 0.00 4.18
1914 1957 9.811995 TTCAGCTAATTTATTGTACTCGTACAT 57.188 29.630 10.40 4.64 44.54 2.29
1926 1969 4.465632 ACTCGTACATGACCTAAATGCA 57.534 40.909 0.00 0.00 0.00 3.96
1959 2009 5.591877 GCACTTCCACTTCATATCATTCCTT 59.408 40.000 0.00 0.00 0.00 3.36
1964 2014 8.908786 TTCCACTTCATATCATTCCTTACATC 57.091 34.615 0.00 0.00 0.00 3.06
1978 2028 5.734720 TCCTTACATCTGGATCAGAACAAC 58.265 41.667 1.53 0.00 44.04 3.32
1979 2029 4.878397 CCTTACATCTGGATCAGAACAACC 59.122 45.833 1.53 0.00 44.04 3.77
1980 2030 5.491070 CTTACATCTGGATCAGAACAACCA 58.509 41.667 1.53 0.00 44.04 3.67
1981 2031 4.371624 ACATCTGGATCAGAACAACCAA 57.628 40.909 1.53 0.00 44.04 3.67
1982 2032 4.330250 ACATCTGGATCAGAACAACCAAG 58.670 43.478 1.53 0.00 44.04 3.61
1983 2033 4.202503 ACATCTGGATCAGAACAACCAAGT 60.203 41.667 1.53 0.00 44.04 3.16
1984 2034 4.008074 TCTGGATCAGAACAACCAAGTC 57.992 45.455 0.00 0.00 37.57 3.01
1985 2035 3.390967 TCTGGATCAGAACAACCAAGTCA 59.609 43.478 0.00 0.00 37.57 3.41
1986 2036 4.136796 CTGGATCAGAACAACCAAGTCAA 58.863 43.478 0.00 0.00 32.44 3.18
1987 2037 4.728772 TGGATCAGAACAACCAAGTCAAT 58.271 39.130 0.00 0.00 0.00 2.57
1988 2038 4.761739 TGGATCAGAACAACCAAGTCAATC 59.238 41.667 0.00 0.00 0.00 2.67
1989 2039 4.156739 GGATCAGAACAACCAAGTCAATCC 59.843 45.833 0.00 0.00 0.00 3.01
1990 2040 3.486383 TCAGAACAACCAAGTCAATCCC 58.514 45.455 0.00 0.00 0.00 3.85
1991 2041 2.558359 CAGAACAACCAAGTCAATCCCC 59.442 50.000 0.00 0.00 0.00 4.81
1992 2042 2.447047 AGAACAACCAAGTCAATCCCCT 59.553 45.455 0.00 0.00 0.00 4.79
1993 2043 2.586648 ACAACCAAGTCAATCCCCTC 57.413 50.000 0.00 0.00 0.00 4.30
1994 2044 1.780309 ACAACCAAGTCAATCCCCTCA 59.220 47.619 0.00 0.00 0.00 3.86
1995 2045 2.176798 ACAACCAAGTCAATCCCCTCAA 59.823 45.455 0.00 0.00 0.00 3.02
1996 2046 2.558359 CAACCAAGTCAATCCCCTCAAC 59.442 50.000 0.00 0.00 0.00 3.18
1997 2047 1.780309 ACCAAGTCAATCCCCTCAACA 59.220 47.619 0.00 0.00 0.00 3.33
1998 2048 2.176798 ACCAAGTCAATCCCCTCAACAA 59.823 45.455 0.00 0.00 0.00 2.83
1999 2049 2.558359 CCAAGTCAATCCCCTCAACAAC 59.442 50.000 0.00 0.00 0.00 3.32
2000 2050 3.221771 CAAGTCAATCCCCTCAACAACA 58.778 45.455 0.00 0.00 0.00 3.33
2001 2051 3.593442 AGTCAATCCCCTCAACAACAA 57.407 42.857 0.00 0.00 0.00 2.83
2002 2052 3.909732 AGTCAATCCCCTCAACAACAAA 58.090 40.909 0.00 0.00 0.00 2.83
2003 2053 4.285863 AGTCAATCCCCTCAACAACAAAA 58.714 39.130 0.00 0.00 0.00 2.44
2004 2054 4.714308 AGTCAATCCCCTCAACAACAAAAA 59.286 37.500 0.00 0.00 0.00 1.94
2026 2076 2.778299 ACCAAGTCAACACGCATATGT 58.222 42.857 4.29 0.00 0.00 2.29
2054 2104 0.545309 AGCAACTCTAGCAGACCCCA 60.545 55.000 0.00 0.00 0.00 4.96
2075 2127 2.814919 ACAAAATCACGACCCGCATAAA 59.185 40.909 0.00 0.00 0.00 1.40
2107 2159 4.885325 GGGCTGAGGAAAACGGATTATAAA 59.115 41.667 0.00 0.00 0.00 1.40
2149 2207 5.054477 CCGAACAGAACCCGTATAATCAAT 58.946 41.667 0.00 0.00 0.00 2.57
2151 2209 5.751509 CGAACAGAACCCGTATAATCAATCA 59.248 40.000 0.00 0.00 0.00 2.57
2195 2253 9.751542 CTAAATATAACATCTTCTTCCTCACGT 57.248 33.333 0.00 0.00 0.00 4.49
2217 2275 1.204941 CTTCCCATCTCGACCTTCGTT 59.795 52.381 0.00 0.00 41.35 3.85
2269 2327 1.078848 GTCTCCTTGTGCTCGCCAT 60.079 57.895 0.00 0.00 0.00 4.40
2320 2378 1.079612 CCGACTGCAGCATCAGACA 60.080 57.895 15.27 0.00 37.51 3.41
2323 2381 1.694018 GACTGCAGCATCAGACAGCG 61.694 60.000 15.27 0.00 37.51 5.18
2327 2385 2.435586 AGCATCAGACAGCGGCAC 60.436 61.111 1.45 0.00 35.48 5.01
2558 2696 4.796495 GGGCGTGGCAGTAAGGGG 62.796 72.222 0.00 0.00 0.00 4.79
2646 2791 2.683933 AGTTGGACTCCCGCCGAT 60.684 61.111 0.00 0.00 34.29 4.18
2673 2818 3.541996 TCACGTATACAGGTCGTCCTA 57.458 47.619 0.00 0.00 43.07 2.94
2679 2824 0.257039 TACAGGTCGTCCTAGGGTCC 59.743 60.000 9.46 6.64 43.07 4.46
2701 2846 6.768381 GTCCTCTCCGAAATCCTTATTTTCAT 59.232 38.462 0.00 0.00 35.41 2.57
2703 2848 6.767902 CCTCTCCGAAATCCTTATTTTCATGA 59.232 38.462 0.00 0.00 35.41 3.07
2710 2855 7.414098 CGAAATCCTTATTTTCATGAGTTCGGT 60.414 37.037 11.19 0.00 44.72 4.69
2723 2869 1.202758 AGTTCGGTCAGGATGTTTGCA 60.203 47.619 0.00 0.00 37.40 4.08
2729 2875 0.111061 TCAGGATGTTTGCAGTGCCT 59.889 50.000 13.72 0.00 37.40 4.75
2776 2925 3.788333 TTACGGGTTCTATTCTGGACG 57.212 47.619 0.00 0.00 0.00 4.79
2777 2926 0.822164 ACGGGTTCTATTCTGGACGG 59.178 55.000 0.00 0.00 0.00 4.79
2818 2967 3.926821 AACCGACGGTTATTTTGCAAT 57.073 38.095 30.22 2.22 44.94 3.56
2830 2980 7.567771 CGGTTATTTTGCAATTTCGTGCTTTTA 60.568 33.333 0.00 0.00 45.17 1.52
2831 2981 8.227119 GGTTATTTTGCAATTTCGTGCTTTTAT 58.773 29.630 0.00 0.00 45.17 1.40
2846 2996 4.962995 TGCTTTTATAGGGTCTGCTAGAGT 59.037 41.667 0.00 0.00 0.00 3.24
2867 3293 8.572855 AGAGTTGCTCTTATTGAAGCTTAATT 57.427 30.769 0.00 0.00 37.60 1.40
2871 3297 9.410556 GTTGCTCTTATTGAAGCTTAATTGAAA 57.589 29.630 0.00 0.00 32.21 2.69
2872 3298 9.630098 TTGCTCTTATTGAAGCTTAATTGAAAG 57.370 29.630 0.00 0.00 32.21 2.62
2874 3300 9.846248 GCTCTTATTGAAGCTTAATTGAAAGAA 57.154 29.630 0.00 0.00 32.21 2.52
2946 3375 5.059832 CGTTCGTTGTTTGACATTTGTGAAA 59.940 36.000 0.00 0.00 0.00 2.69
2988 3418 7.772332 ACGTCATCCTTTTGAAGATACATAC 57.228 36.000 0.00 0.00 0.00 2.39
2993 3423 9.383519 TCATCCTTTTGAAGATACATACTCAAC 57.616 33.333 0.00 0.00 0.00 3.18
3035 3595 7.876582 GGGTCCCACTAAACAACATCTATATAC 59.123 40.741 1.78 0.00 0.00 1.47
3059 3622 3.201487 AGTTAGCGGTTTTAAGGGGCTAT 59.799 43.478 0.00 0.00 36.24 2.97
3076 3639 3.817084 GGCTATAATGTCATTCAGCAGCA 59.183 43.478 23.42 0.78 34.11 4.41
3083 3646 2.038952 TGTCATTCAGCAGCAACCTAGT 59.961 45.455 0.00 0.00 0.00 2.57
3084 3647 2.417933 GTCATTCAGCAGCAACCTAGTG 59.582 50.000 0.00 0.00 0.00 2.74
3111 3674 0.251474 AGCTTGCTTTGAGGATGCCA 60.251 50.000 4.21 0.00 37.41 4.92
3134 3697 1.270907 TTTGCCATGGCCCGTTATTT 58.729 45.000 33.44 0.00 41.09 1.40
3176 3739 7.688478 ATGAATATTCACAATTGCGATGTTG 57.312 32.000 20.19 0.00 40.49 3.33
3189 3752 2.031314 GCGATGTTGTGATGGTGATCAG 59.969 50.000 0.00 0.00 39.36 2.90
3219 3782 2.694213 CATATGTCGTGTGGTGGAACA 58.306 47.619 0.00 0.00 39.98 3.18
3225 3788 3.007506 TGTCGTGTGGTGGAACAGATAAT 59.992 43.478 0.00 0.00 41.80 1.28
3236 3799 7.147497 TGGTGGAACAGATAATGATAGTGTGAT 60.147 37.037 0.00 0.00 41.80 3.06
3270 3833 8.582437 CATTAAAAATCATGGAGTCCTATGCAT 58.418 33.333 11.33 3.79 0.00 3.96
3271 3834 6.645790 AAAAATCATGGAGTCCTATGCATC 57.354 37.500 11.33 0.00 0.00 3.91
3272 3835 3.996921 ATCATGGAGTCCTATGCATCC 57.003 47.619 11.33 0.00 0.00 3.51
3274 3840 1.004044 CATGGAGTCCTATGCATCCCC 59.996 57.143 11.33 0.00 0.00 4.81
3292 3858 2.973945 CCCCCTCTCGAAGTAAAACTG 58.026 52.381 0.00 0.00 0.00 3.16
3293 3859 2.354805 CCCCCTCTCGAAGTAAAACTGG 60.355 54.545 0.00 0.00 0.00 4.00
3294 3860 2.354805 CCCCTCTCGAAGTAAAACTGGG 60.355 54.545 0.00 0.00 0.00 4.45
3297 3863 3.746492 CCTCTCGAAGTAAAACTGGGTTG 59.254 47.826 0.00 0.00 0.00 3.77
3325 3892 8.973835 TTAAATGCCTACAAAATTCTTAACCG 57.026 30.769 0.00 0.00 0.00 4.44
3351 3918 3.751479 ACCAAAATGGGTTTCTCTTGC 57.249 42.857 0.87 0.00 43.37 4.01
3386 3953 0.172578 CGTACCTTCTGATGTCCGCA 59.827 55.000 0.00 0.00 0.00 5.69
3392 3959 1.667724 CTTCTGATGTCCGCATTGTCC 59.332 52.381 0.00 0.00 35.07 4.02
3446 4013 0.582005 GCTCAGACAACGTGTTCACC 59.418 55.000 0.00 0.00 0.00 4.02
3500 4067 2.616330 CGCCTTTCTTTGCCTCGCA 61.616 57.895 0.00 0.00 36.47 5.10
3501 4068 1.885871 GCCTTTCTTTGCCTCGCAT 59.114 52.632 0.00 0.00 38.76 4.73
3506 4073 2.183478 TTCTTTGCCTCGCATTCTCA 57.817 45.000 0.00 0.00 38.76 3.27
3528 4095 3.582208 AGCTCTCATCTCAGGTTTCAAGT 59.418 43.478 0.00 0.00 0.00 3.16
3552 4119 4.469586 TGTCCAAGCAGACCTACATATGAA 59.530 41.667 10.38 0.00 35.83 2.57
3576 4143 0.249911 GTGACATATGGGCGAGGTCC 60.250 60.000 7.80 0.00 0.00 4.46
3589 4156 0.247736 GAGGTCCGCTTCATCTGTGT 59.752 55.000 0.00 0.00 0.00 3.72
3606 4173 2.176798 TGTGTCCATTTGGTTCCCTCTT 59.823 45.455 0.00 0.00 36.34 2.85
3611 4178 2.552155 CCATTTGGTTCCCTCTTGACGA 60.552 50.000 0.00 0.00 0.00 4.20
3615 4182 1.001974 TGGTTCCCTCTTGACGATGTG 59.998 52.381 0.00 0.00 0.00 3.21
3641 4208 4.081406 TCCATTTGGTTCTTCCTGATGTG 58.919 43.478 0.00 0.00 37.07 3.21
3642 4209 3.367703 CCATTTGGTTCTTCCTGATGTGC 60.368 47.826 0.00 0.00 37.07 4.57
3644 4211 2.189594 TGGTTCTTCCTGATGTGCAG 57.810 50.000 0.00 0.00 44.49 4.41
3645 4212 1.421268 TGGTTCTTCCTGATGTGCAGT 59.579 47.619 0.00 0.00 43.33 4.40
3646 4213 2.079925 GGTTCTTCCTGATGTGCAGTC 58.920 52.381 0.00 0.00 43.33 3.51
3647 4214 2.079925 GTTCTTCCTGATGTGCAGTCC 58.920 52.381 0.00 0.00 43.33 3.85
3648 4215 1.351076 TCTTCCTGATGTGCAGTCCA 58.649 50.000 0.00 0.00 43.33 4.02
3649 4216 1.002430 TCTTCCTGATGTGCAGTCCAC 59.998 52.381 0.00 0.00 43.33 4.02
3650 4217 0.036732 TTCCTGATGTGCAGTCCACC 59.963 55.000 0.00 0.00 44.01 4.61
3651 4218 0.837691 TCCTGATGTGCAGTCCACCT 60.838 55.000 0.00 0.00 44.01 4.00
3652 4219 0.675837 CCTGATGTGCAGTCCACCTG 60.676 60.000 0.00 0.00 44.01 4.00
3653 4220 0.322648 CTGATGTGCAGTCCACCTGA 59.677 55.000 0.00 0.00 44.49 3.86
3682 4249 3.586470 TGGGTTTCTTTTGTGCTCCTA 57.414 42.857 0.00 0.00 0.00 2.94
3690 4257 7.255486 GGTTTCTTTTGTGCTCCTAACTAATGT 60.255 37.037 0.00 0.00 0.00 2.71
3692 4259 5.938125 TCTTTTGTGCTCCTAACTAATGTCC 59.062 40.000 0.00 0.00 0.00 4.02
3731 4298 7.496263 TGCGTGCTTATTTAGGTGTTTATATCA 59.504 33.333 0.00 0.00 0.00 2.15
3757 4324 5.619607 CGCGCCAAAGTATGTAATTATGTTC 59.380 40.000 0.00 0.00 0.00 3.18
3798 4365 3.248266 GTGTGCTCAAATGATTCTTGCC 58.752 45.455 0.00 0.00 0.00 4.52
3816 4383 2.296752 TGCCAATCAAGGAATGTGTGTG 59.703 45.455 0.00 0.00 0.00 3.82
3817 4384 2.557924 GCCAATCAAGGAATGTGTGTGA 59.442 45.455 0.00 0.00 0.00 3.58
3875 4442 4.361451 CATGTGTGCATCTTTCTTACCC 57.639 45.455 0.00 0.00 31.99 3.69
3893 4460 1.156645 CCGCTGGAGAGCATACAAGC 61.157 60.000 0.00 0.00 46.62 4.01
3954 4523 9.713740 AAAGTATAAGTAGACAACGTAATCTCG 57.286 33.333 4.84 0.00 0.00 4.04
3958 4527 0.892755 AGACAACGTAATCTCGGGCA 59.107 50.000 0.00 0.00 34.94 5.36
3966 4535 2.541556 GTAATCTCGGGCAGTCACTTC 58.458 52.381 0.00 0.00 0.00 3.01
3973 4542 0.247736 GGGCAGTCACTTCAGTCGAT 59.752 55.000 0.00 0.00 0.00 3.59
4018 4587 2.012937 CGGTGTTTAGCCGGTTATGA 57.987 50.000 1.90 0.00 44.98 2.15
4055 4624 1.676006 AGACTTTGACCTTGTTTGGCG 59.324 47.619 0.00 0.00 0.00 5.69
4059 4628 1.733402 TTGACCTTGTTTGGCGCCTG 61.733 55.000 29.70 10.26 0.00 4.85
4060 4629 1.896660 GACCTTGTTTGGCGCCTGA 60.897 57.895 29.70 13.94 0.00 3.86
4222 4791 3.998341 GCAACATTAGGGAAACTACGACA 59.002 43.478 0.00 0.00 0.00 4.35
4224 4793 4.198028 ACATTAGGGAAACTACGACACC 57.802 45.455 0.00 0.00 0.00 4.16
4226 4795 1.176527 TAGGGAAACTACGACACCGG 58.823 55.000 0.00 0.00 40.78 5.28
4255 4824 2.093658 TCCTCGACAAGTAAGCCATTCC 60.094 50.000 0.00 0.00 0.00 3.01
4289 4858 7.493320 CCACAATCATTTGGAAGATTTGGTATG 59.507 37.037 0.00 0.00 37.15 2.39
4326 4895 6.623767 GCTCATCTTCTGAAACCAATACCAAC 60.624 42.308 0.00 0.00 32.14 3.77
4332 4901 5.197451 TCTGAAACCAATACCAACACAACT 58.803 37.500 0.00 0.00 0.00 3.16
4333 4902 5.298276 TCTGAAACCAATACCAACACAACTC 59.702 40.000 0.00 0.00 0.00 3.01
4334 4903 4.339814 TGAAACCAATACCAACACAACTCC 59.660 41.667 0.00 0.00 0.00 3.85
4339 4908 3.906720 ATACCAACACAACTCCGCTAT 57.093 42.857 0.00 0.00 0.00 2.97
4346 4915 5.296780 CCAACACAACTCCGCTATAATCAAT 59.703 40.000 0.00 0.00 0.00 2.57
4389 4958 1.347707 CTTGGTCCTACTGGCTTGTGA 59.652 52.381 0.00 0.00 0.00 3.58
4394 4963 2.552743 GTCCTACTGGCTTGTGAAAACC 59.447 50.000 0.00 0.00 0.00 3.27
4399 4968 1.264288 CTGGCTTGTGAAAACCGAGTC 59.736 52.381 0.00 0.00 0.00 3.36
4411 4980 1.592669 CCGAGTCATAAGGCTGCCG 60.593 63.158 13.96 0.00 0.00 5.69
4432 5001 4.379174 GCTTTTGGCGTCTCCTCA 57.621 55.556 0.00 0.00 35.26 3.86
4433 5002 1.869690 GCTTTTGGCGTCTCCTCAC 59.130 57.895 0.00 0.00 35.26 3.51
4434 5003 0.884704 GCTTTTGGCGTCTCCTCACA 60.885 55.000 0.00 0.00 35.26 3.58
4439 5014 1.262417 TGGCGTCTCCTCACATGTTA 58.738 50.000 0.00 0.00 35.26 2.41
4444 5019 4.184629 GCGTCTCCTCACATGTTAATCTT 58.815 43.478 0.00 0.00 0.00 2.40
4472 5047 5.630121 TGTAATCAACTCAGACCATTGGTT 58.370 37.500 10.29 0.00 35.25 3.67
4473 5048 5.473162 TGTAATCAACTCAGACCATTGGTTG 59.527 40.000 10.29 10.20 35.25 3.77
4480 5055 3.885297 CTCAGACCATTGGTTGTTTGAGT 59.115 43.478 20.78 0.00 35.25 3.41
4484 5059 5.473162 CAGACCATTGGTTGTTTGAGTGATA 59.527 40.000 10.29 0.00 35.25 2.15
4516 5091 4.640690 ACACCCTGTCTCGCCCCT 62.641 66.667 0.00 0.00 0.00 4.79
4518 5093 3.003763 ACCCTGTCTCGCCCCTTC 61.004 66.667 0.00 0.00 0.00 3.46
4520 5095 2.685380 CCTGTCTCGCCCCTTCCT 60.685 66.667 0.00 0.00 0.00 3.36
4521 5096 2.581354 CTGTCTCGCCCCTTCCTG 59.419 66.667 0.00 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 40 7.026631 TCCTAACAAAAGTTGAAGACACATG 57.973 36.000 0.00 0.00 0.00 3.21
43 45 7.973944 ACACAAATCCTAACAAAAGTTGAAGAC 59.026 33.333 0.00 0.00 0.00 3.01
278 286 1.416813 GCCGTCGCTGATGAAGAGTG 61.417 60.000 0.00 0.00 0.00 3.51
297 305 0.317269 CCAGCGCAACAGAACAACAG 60.317 55.000 11.47 0.00 0.00 3.16
376 384 0.104672 TCACCCCTCCTTCACCAGAA 60.105 55.000 0.00 0.00 0.00 3.02
385 393 2.052690 CGTCGTCATCACCCCTCCT 61.053 63.158 0.00 0.00 0.00 3.69
393 401 1.945354 GAAGGGAGCCGTCGTCATCA 61.945 60.000 0.00 0.00 0.00 3.07
547 556 6.806739 GGAAAGCAAAGGACATTTACATGTAC 59.193 38.462 4.68 0.00 44.22 2.90
548 557 6.491745 TGGAAAGCAAAGGACATTTACATGTA 59.508 34.615 0.08 0.08 44.22 2.29
550 559 5.782047 TGGAAAGCAAAGGACATTTACATG 58.218 37.500 0.00 0.00 36.34 3.21
551 560 6.351286 GGATGGAAAGCAAAGGACATTTACAT 60.351 38.462 0.00 0.00 38.57 2.29
552 561 5.047377 GGATGGAAAGCAAAGGACATTTACA 60.047 40.000 0.00 0.00 30.45 2.41
553 562 5.185828 AGGATGGAAAGCAAAGGACATTTAC 59.814 40.000 0.00 0.00 0.00 2.01
554 563 5.332743 AGGATGGAAAGCAAAGGACATTTA 58.667 37.500 0.00 0.00 0.00 1.40
555 564 4.162651 AGGATGGAAAGCAAAGGACATTT 58.837 39.130 0.00 0.00 0.00 2.32
556 565 3.782992 AGGATGGAAAGCAAAGGACATT 58.217 40.909 0.00 0.00 0.00 2.71
557 566 3.463048 AGGATGGAAAGCAAAGGACAT 57.537 42.857 0.00 0.00 0.00 3.06
558 567 2.978156 AGGATGGAAAGCAAAGGACA 57.022 45.000 0.00 0.00 0.00 4.02
559 568 8.870075 ATATATTAGGATGGAAAGCAAAGGAC 57.130 34.615 0.00 0.00 0.00 3.85
560 569 7.824289 CGATATATTAGGATGGAAAGCAAAGGA 59.176 37.037 0.00 0.00 0.00 3.36
561 570 7.824289 TCGATATATTAGGATGGAAAGCAAAGG 59.176 37.037 0.00 0.00 0.00 3.11
562 571 8.660373 GTCGATATATTAGGATGGAAAGCAAAG 58.340 37.037 0.00 0.00 0.00 2.77
563 572 8.154203 TGTCGATATATTAGGATGGAAAGCAAA 58.846 33.333 0.00 0.00 0.00 3.68
564 573 7.602644 GTGTCGATATATTAGGATGGAAAGCAA 59.397 37.037 0.00 0.00 0.00 3.91
565 574 7.097192 GTGTCGATATATTAGGATGGAAAGCA 58.903 38.462 0.00 0.00 0.00 3.91
566 575 6.253727 CGTGTCGATATATTAGGATGGAAAGC 59.746 42.308 0.00 0.00 0.00 3.51
567 576 6.253727 GCGTGTCGATATATTAGGATGGAAAG 59.746 42.308 0.00 0.00 0.00 2.62
568 577 6.071560 AGCGTGTCGATATATTAGGATGGAAA 60.072 38.462 0.00 0.00 0.00 3.13
569 578 5.417894 AGCGTGTCGATATATTAGGATGGAA 59.582 40.000 0.00 0.00 0.00 3.53
570 579 4.948004 AGCGTGTCGATATATTAGGATGGA 59.052 41.667 0.00 0.00 0.00 3.41
571 580 5.250235 AGCGTGTCGATATATTAGGATGG 57.750 43.478 0.00 0.00 0.00 3.51
572 581 6.556212 AGAAGCGTGTCGATATATTAGGATG 58.444 40.000 0.00 0.00 0.00 3.51
573 582 6.457122 CGAGAAGCGTGTCGATATATTAGGAT 60.457 42.308 13.78 0.00 42.94 3.24
574 583 5.163884 CGAGAAGCGTGTCGATATATTAGGA 60.164 44.000 13.78 0.00 42.94 2.94
575 584 5.022653 CGAGAAGCGTGTCGATATATTAGG 58.977 45.833 13.78 0.00 42.94 2.69
576 585 5.855235 TCGAGAAGCGTGTCGATATATTAG 58.145 41.667 17.35 0.00 43.91 1.73
577 586 5.851047 TCGAGAAGCGTGTCGATATATTA 57.149 39.130 17.35 0.00 43.91 0.98
578 587 4.744136 TCGAGAAGCGTGTCGATATATT 57.256 40.909 17.35 0.00 43.91 1.28
584 593 0.029700 TTTGTCGAGAAGCGTGTCGA 59.970 50.000 17.35 17.35 46.30 4.20
585 594 0.850217 TTTTGTCGAGAAGCGTGTCG 59.150 50.000 12.86 12.86 41.71 4.35
609 618 6.221558 ACATCATAATGCGTTGGCTCCAAC 62.222 45.833 19.14 19.14 42.63 3.77
610 619 2.121291 TCATAATGCGTTGGCTCCAA 57.879 45.000 0.08 0.00 40.82 3.53
611 620 1.948834 CATCATAATGCGTTGGCTCCA 59.051 47.619 0.08 0.00 40.82 3.86
612 621 1.949525 ACATCATAATGCGTTGGCTCC 59.050 47.619 0.08 0.00 40.82 4.70
613 622 3.698029 AACATCATAATGCGTTGGCTC 57.302 42.857 0.08 0.00 40.82 4.70
614 623 3.193267 ACAAACATCATAATGCGTTGGCT 59.807 39.130 0.08 0.00 40.82 4.75
615 624 3.510719 ACAAACATCATAATGCGTTGGC 58.489 40.909 0.08 0.00 36.34 4.52
616 625 4.985413 AGACAAACATCATAATGCGTTGG 58.015 39.130 0.08 0.00 36.34 3.77
617 626 5.872635 AGAGACAAACATCATAATGCGTTG 58.127 37.500 0.08 0.00 37.29 4.10
618 627 6.500684 AAGAGACAAACATCATAATGCGTT 57.499 33.333 0.00 0.00 36.26 4.84
619 628 5.220472 CGAAGAGACAAACATCATAATGCGT 60.220 40.000 0.00 0.00 36.26 5.24
620 629 5.005682 TCGAAGAGACAAACATCATAATGCG 59.994 40.000 0.00 0.00 36.26 4.73
621 630 6.349973 TCGAAGAGACAAACATCATAATGC 57.650 37.500 0.00 0.00 36.26 3.56
636 645 1.006571 GTTGGCGTGGTCGAAGAGA 60.007 57.895 0.00 0.00 36.95 3.10
637 646 1.006102 AGTTGGCGTGGTCGAAGAG 60.006 57.895 0.00 0.00 36.95 2.85
638 647 1.006571 GAGTTGGCGTGGTCGAAGA 60.007 57.895 0.00 0.00 39.71 2.87
639 648 0.878523 TTGAGTTGGCGTGGTCGAAG 60.879 55.000 0.00 0.00 39.71 3.79
640 649 0.878523 CTTGAGTTGGCGTGGTCGAA 60.879 55.000 0.00 0.00 39.71 3.71
641 650 1.300620 CTTGAGTTGGCGTGGTCGA 60.301 57.895 0.00 0.00 39.71 4.20
642 651 2.317609 CCTTGAGTTGGCGTGGTCG 61.318 63.158 0.00 0.00 40.37 4.79
643 652 2.617274 GCCTTGAGTTGGCGTGGTC 61.617 63.158 0.00 0.00 41.03 4.02
644 653 2.594592 GCCTTGAGTTGGCGTGGT 60.595 61.111 0.00 0.00 41.03 4.16
650 659 4.949856 AGTATAATGTTGGCCTTGAGTTGG 59.050 41.667 3.32 0.00 0.00 3.77
651 660 6.823689 ACTAGTATAATGTTGGCCTTGAGTTG 59.176 38.462 3.32 0.00 0.00 3.16
652 661 6.958767 ACTAGTATAATGTTGGCCTTGAGTT 58.041 36.000 3.32 0.00 0.00 3.01
653 662 6.561519 ACTAGTATAATGTTGGCCTTGAGT 57.438 37.500 3.32 0.00 0.00 3.41
656 665 9.944376 ACATATACTAGTATAATGTTGGCCTTG 57.056 33.333 23.14 15.56 32.39 3.61
663 672 9.745880 GCGCCATACATATACTAGTATAATGTT 57.254 33.333 25.88 17.63 32.39 2.71
664 673 8.909923 TGCGCCATACATATACTAGTATAATGT 58.090 33.333 23.14 24.28 32.39 2.71
665 674 9.914131 ATGCGCCATACATATACTAGTATAATG 57.086 33.333 23.14 20.39 32.39 1.90
669 678 9.297037 TCATATGCGCCATACATATACTAGTAT 57.703 33.333 19.07 19.07 38.38 2.12
670 679 8.565416 GTCATATGCGCCATACATATACTAGTA 58.435 37.037 4.18 4.77 38.38 1.82
671 680 7.285629 AGTCATATGCGCCATACATATACTAGT 59.714 37.037 4.18 0.00 38.38 2.57
672 681 7.592903 CAGTCATATGCGCCATACATATACTAG 59.407 40.741 4.18 0.00 38.38 2.57
673 682 7.284489 TCAGTCATATGCGCCATACATATACTA 59.716 37.037 4.18 0.00 38.38 1.82
674 683 6.096846 TCAGTCATATGCGCCATACATATACT 59.903 38.462 4.18 3.56 38.38 2.12
675 684 6.273071 TCAGTCATATGCGCCATACATATAC 58.727 40.000 4.18 1.46 38.38 1.47
676 685 6.463995 TCAGTCATATGCGCCATACATATA 57.536 37.500 4.18 0.00 38.38 0.86
677 686 5.343307 TCAGTCATATGCGCCATACATAT 57.657 39.130 4.18 0.00 40.52 1.78
678 687 4.799564 TCAGTCATATGCGCCATACATA 57.200 40.909 4.18 0.00 34.64 2.29
679 688 3.683365 TCAGTCATATGCGCCATACAT 57.317 42.857 4.18 0.00 0.00 2.29
680 689 3.467374 TTCAGTCATATGCGCCATACA 57.533 42.857 4.18 0.00 0.00 2.29
681 690 3.058914 GGTTTCAGTCATATGCGCCATAC 60.059 47.826 4.18 0.00 0.00 2.39
682 691 3.138304 GGTTTCAGTCATATGCGCCATA 58.862 45.455 4.18 3.26 0.00 2.74
683 692 1.949525 GGTTTCAGTCATATGCGCCAT 59.050 47.619 4.18 0.63 0.00 4.40
684 693 1.065491 AGGTTTCAGTCATATGCGCCA 60.065 47.619 4.18 0.00 0.00 5.69
685 694 1.599542 GAGGTTTCAGTCATATGCGCC 59.400 52.381 4.18 0.00 0.00 6.53
686 695 2.279741 TGAGGTTTCAGTCATATGCGC 58.720 47.619 0.00 0.00 0.00 6.09
687 696 3.310774 CCTTGAGGTTTCAGTCATATGCG 59.689 47.826 0.00 0.00 34.15 4.73
688 697 4.889832 CCTTGAGGTTTCAGTCATATGC 57.110 45.455 0.00 0.00 34.15 3.14
702 711 2.168521 TCGAGAATGGCTTACCTTGAGG 59.831 50.000 0.00 0.00 42.17 3.86
703 712 3.526931 TCGAGAATGGCTTACCTTGAG 57.473 47.619 0.00 0.00 36.63 3.02
704 713 3.973206 TTCGAGAATGGCTTACCTTGA 57.027 42.857 0.00 0.00 36.63 3.02
705 714 5.371115 TTTTTCGAGAATGGCTTACCTTG 57.629 39.130 0.00 0.00 36.63 3.61
727 736 5.126396 GCACCAGCTTATCTTGAGTTTTT 57.874 39.130 0.00 0.00 37.91 1.94
728 737 4.773323 GCACCAGCTTATCTTGAGTTTT 57.227 40.909 0.00 0.00 37.91 2.43
742 751 0.035458 ACCTGACTAACAGCACCAGC 59.965 55.000 0.00 0.00 44.52 4.85
743 752 1.620819 AGACCTGACTAACAGCACCAG 59.379 52.381 0.00 0.00 44.52 4.00
744 753 1.717032 AGACCTGACTAACAGCACCA 58.283 50.000 0.00 0.00 44.52 4.17
745 754 2.826725 ACTAGACCTGACTAACAGCACC 59.173 50.000 0.00 0.00 44.52 5.01
746 755 4.701171 ACTACTAGACCTGACTAACAGCAC 59.299 45.833 0.00 0.00 44.52 4.40
747 756 4.919793 ACTACTAGACCTGACTAACAGCA 58.080 43.478 0.00 0.00 44.52 4.41
748 757 5.007921 GCTACTACTAGACCTGACTAACAGC 59.992 48.000 0.00 0.00 44.52 4.40
749 758 6.114089 TGCTACTACTAGACCTGACTAACAG 58.886 44.000 0.00 0.00 45.36 3.16
750 759 6.058553 TGCTACTACTAGACCTGACTAACA 57.941 41.667 0.00 0.00 0.00 2.41
751 760 7.571080 AATGCTACTACTAGACCTGACTAAC 57.429 40.000 0.00 0.00 0.00 2.34
752 761 8.591114 AAAATGCTACTACTAGACCTGACTAA 57.409 34.615 0.00 0.00 0.00 2.24
753 762 8.053963 AGAAAATGCTACTACTAGACCTGACTA 58.946 37.037 0.00 0.00 0.00 2.59
754 763 6.893005 AGAAAATGCTACTACTAGACCTGACT 59.107 38.462 0.00 0.00 0.00 3.41
755 764 7.102847 AGAAAATGCTACTACTAGACCTGAC 57.897 40.000 0.00 0.00 0.00 3.51
756 765 7.719871 AAGAAAATGCTACTACTAGACCTGA 57.280 36.000 0.00 0.00 0.00 3.86
759 768 9.819267 ACATTAAGAAAATGCTACTACTAGACC 57.181 33.333 0.00 0.00 0.00 3.85
767 776 9.110502 GCTAGGTTACATTAAGAAAATGCTACT 57.889 33.333 0.00 0.00 0.00 2.57
768 777 9.110502 AGCTAGGTTACATTAAGAAAATGCTAC 57.889 33.333 0.00 0.00 0.00 3.58
769 778 9.326413 GAGCTAGGTTACATTAAGAAAATGCTA 57.674 33.333 0.00 0.00 0.00 3.49
770 779 7.829211 TGAGCTAGGTTACATTAAGAAAATGCT 59.171 33.333 0.00 0.00 0.00 3.79
781 790 4.202223 CCACCGTATGAGCTAGGTTACATT 60.202 45.833 0.00 0.00 34.25 2.71
791 800 3.723235 CTGCGCCACCGTATGAGCT 62.723 63.158 4.18 0.00 36.67 4.09
797 806 1.141019 GATCTTCTGCGCCACCGTA 59.859 57.895 4.18 0.00 36.67 4.02
890 901 3.777478 TCAGTTGGATCGGTTAATCGAC 58.223 45.455 14.05 7.51 42.21 4.20
894 905 5.160607 TCAGTTCAGTTGGATCGGTTAAT 57.839 39.130 0.00 0.00 0.00 1.40
920 935 5.013495 TGGAGTGGAGATATGGAATGGAATC 59.987 44.000 0.00 0.00 0.00 2.52
963 979 2.428558 GGGAACGAACGTACGCGAC 61.429 63.158 15.93 5.79 42.00 5.19
964 980 2.126888 GGGAACGAACGTACGCGA 60.127 61.111 15.93 0.00 42.00 5.87
965 981 2.428902 TGGGAACGAACGTACGCG 60.429 61.111 16.72 14.40 44.93 6.01
966 982 2.374995 GGTGGGAACGAACGTACGC 61.375 63.158 16.72 0.00 36.70 4.42
967 983 2.082366 CGGTGGGAACGAACGTACG 61.082 63.158 15.01 15.01 39.31 3.67
968 984 2.374995 GCGGTGGGAACGAACGTAC 61.375 63.158 0.00 0.00 0.00 3.67
1217 1233 0.522180 CTCGTAGTGGTCGAACTGCT 59.478 55.000 0.33 2.47 36.89 4.24
1255 1271 3.423154 GAAGTGCGCCGGAGTTGG 61.423 66.667 5.05 0.00 0.00 3.77
1257 1273 1.302511 AATGAAGTGCGCCGGAGTT 60.303 52.632 5.05 0.00 0.00 3.01
1258 1274 2.034879 CAATGAAGTGCGCCGGAGT 61.035 57.895 5.05 0.00 0.00 3.85
1259 1275 1.741401 TCAATGAAGTGCGCCGGAG 60.741 57.895 5.05 1.55 0.00 4.63
1260 1276 2.032634 GTCAATGAAGTGCGCCGGA 61.033 57.895 5.05 0.00 0.00 5.14
1262 1278 2.480555 GGTCAATGAAGTGCGCCG 59.519 61.111 4.18 0.00 0.00 6.46
1263 1279 2.700773 GGGGTCAATGAAGTGCGCC 61.701 63.158 4.18 0.00 0.00 6.53
1536 1574 1.684248 GCAGAATTCACCAGGGCAGAT 60.684 52.381 8.44 0.00 0.00 2.90
1544 1582 1.377202 GCCGAGGCAGAATTCACCA 60.377 57.895 17.10 0.00 41.49 4.17
1545 1583 3.502572 GCCGAGGCAGAATTCACC 58.497 61.111 9.58 8.77 41.49 4.02
1575 1613 3.580022 TCTGAGACAAATGCCAGAGAGAA 59.420 43.478 0.00 0.00 32.51 2.87
1576 1614 3.056250 GTCTGAGACAAATGCCAGAGAGA 60.056 47.826 7.90 0.00 36.46 3.10
1579 1617 3.049708 TGTCTGAGACAAATGCCAGAG 57.950 47.619 13.74 0.00 39.78 3.35
1612 1650 0.467804 GCTCTGATCCCCTTGGAGAC 59.532 60.000 0.00 0.00 46.08 3.36
1617 1655 2.158711 TGCTTATGCTCTGATCCCCTTG 60.159 50.000 1.96 0.00 40.48 3.61
1622 1660 7.269477 AGTAATTTTGCTTATGCTCTGATCC 57.731 36.000 1.96 0.00 40.48 3.36
1624 1662 8.284945 TCAAGTAATTTTGCTTATGCTCTGAT 57.715 30.769 1.96 0.00 40.48 2.90
1626 1664 7.809331 TGTTCAAGTAATTTTGCTTATGCTCTG 59.191 33.333 1.96 0.00 40.48 3.35
1628 1666 8.519492 TTGTTCAAGTAATTTTGCTTATGCTC 57.481 30.769 1.96 0.00 40.48 4.26
1643 1681 9.174166 GCTTTTCCTATTCCTATTGTTCAAGTA 57.826 33.333 0.00 0.00 0.00 2.24
1644 1682 7.669722 TGCTTTTCCTATTCCTATTGTTCAAGT 59.330 33.333 0.00 0.00 0.00 3.16
1645 1683 8.055279 TGCTTTTCCTATTCCTATTGTTCAAG 57.945 34.615 0.00 0.00 0.00 3.02
1646 1684 8.415950 TTGCTTTTCCTATTCCTATTGTTCAA 57.584 30.769 0.00 0.00 0.00 2.69
1647 1685 8.415950 TTTGCTTTTCCTATTCCTATTGTTCA 57.584 30.769 0.00 0.00 0.00 3.18
1648 1686 9.358872 CTTTTGCTTTTCCTATTCCTATTGTTC 57.641 33.333 0.00 0.00 0.00 3.18
1649 1687 9.088987 TCTTTTGCTTTTCCTATTCCTATTGTT 57.911 29.630 0.00 0.00 0.00 2.83
1650 1688 8.650143 TCTTTTGCTTTTCCTATTCCTATTGT 57.350 30.769 0.00 0.00 0.00 2.71
1654 1692 9.396022 CAGTATCTTTTGCTTTTCCTATTCCTA 57.604 33.333 0.00 0.00 0.00 2.94
1655 1693 7.340487 CCAGTATCTTTTGCTTTTCCTATTCCT 59.660 37.037 0.00 0.00 0.00 3.36
1656 1694 7.122799 ACCAGTATCTTTTGCTTTTCCTATTCC 59.877 37.037 0.00 0.00 0.00 3.01
1657 1695 8.056407 ACCAGTATCTTTTGCTTTTCCTATTC 57.944 34.615 0.00 0.00 0.00 1.75
1658 1696 9.528489 TTACCAGTATCTTTTGCTTTTCCTATT 57.472 29.630 0.00 0.00 0.00 1.73
1695 1733 1.202177 CCACGCATCCAGAATTTTCGG 60.202 52.381 0.00 0.00 0.00 4.30
1696 1734 1.468520 ACCACGCATCCAGAATTTTCG 59.531 47.619 0.00 0.00 0.00 3.46
1700 1738 2.501723 ACTCTACCACGCATCCAGAATT 59.498 45.455 0.00 0.00 0.00 2.17
1701 1739 2.111384 ACTCTACCACGCATCCAGAAT 58.889 47.619 0.00 0.00 0.00 2.40
1707 1745 4.810790 AGCAATATACTCTACCACGCATC 58.189 43.478 0.00 0.00 0.00 3.91
1712 1750 6.870965 CCTCAATGAGCAATATACTCTACCAC 59.129 42.308 4.40 0.00 35.12 4.16
1716 1754 7.618019 AACCCTCAATGAGCAATATACTCTA 57.382 36.000 4.40 0.00 35.12 2.43
1731 1769 2.965147 CCACCAACTCAAAACCCTCAAT 59.035 45.455 0.00 0.00 0.00 2.57
1743 1783 2.035832 CCACCAAATTGACCACCAACTC 59.964 50.000 0.00 0.00 37.63 3.01
1754 1794 3.006110 ACAGCTTCACATCCACCAAATTG 59.994 43.478 0.00 0.00 0.00 2.32
1768 1808 2.011947 GCTATGCATCACACAGCTTCA 58.988 47.619 0.19 0.00 0.00 3.02
1775 1815 0.298707 CGACGTGCTATGCATCACAC 59.701 55.000 17.78 17.78 41.91 3.82
1840 1882 2.127251 CAGCTTGCGCGACTGATAATA 58.873 47.619 12.10 0.00 42.32 0.98
1846 1888 2.127496 CAACAGCTTGCGCGACTG 60.127 61.111 12.10 18.96 42.32 3.51
1910 1953 5.109500 TGTGGATGCATTTAGGTCATGTA 57.891 39.130 0.00 0.00 0.00 2.29
1914 1957 3.289836 CCATGTGGATGCATTTAGGTCA 58.710 45.455 0.00 0.00 37.39 4.02
1922 1965 1.108776 GAAGTGCCATGTGGATGCAT 58.891 50.000 0.00 0.00 37.39 3.96
1952 2002 6.351711 TGTTCTGATCCAGATGTAAGGAATG 58.648 40.000 0.00 0.00 40.39 2.67
1959 2009 5.013079 ACTTGGTTGTTCTGATCCAGATGTA 59.987 40.000 0.00 0.00 40.39 2.29
1964 2014 3.743521 TGACTTGGTTGTTCTGATCCAG 58.256 45.455 0.00 0.00 0.00 3.86
1978 2028 2.558359 GTTGTTGAGGGGATTGACTTGG 59.442 50.000 0.00 0.00 0.00 3.61
1979 2029 3.221771 TGTTGTTGAGGGGATTGACTTG 58.778 45.455 0.00 0.00 0.00 3.16
1980 2030 3.593442 TGTTGTTGAGGGGATTGACTT 57.407 42.857 0.00 0.00 0.00 3.01
1981 2031 3.593442 TTGTTGTTGAGGGGATTGACT 57.407 42.857 0.00 0.00 0.00 3.41
1982 2032 4.664150 TTTTGTTGTTGAGGGGATTGAC 57.336 40.909 0.00 0.00 0.00 3.18
2002 2052 3.518634 ATGCGTGTTGACTTGGTTTTT 57.481 38.095 0.00 0.00 0.00 1.94
2003 2053 4.037446 ACATATGCGTGTTGACTTGGTTTT 59.963 37.500 1.58 0.00 0.00 2.43
2004 2054 3.568007 ACATATGCGTGTTGACTTGGTTT 59.432 39.130 1.58 0.00 0.00 3.27
2005 2055 3.146066 ACATATGCGTGTTGACTTGGTT 58.854 40.909 1.58 0.00 0.00 3.67
2006 2056 2.778299 ACATATGCGTGTTGACTTGGT 58.222 42.857 1.58 0.00 0.00 3.67
2007 2057 3.829886 AACATATGCGTGTTGACTTGG 57.170 42.857 1.58 0.00 40.60 3.61
2054 2104 2.102070 TATGCGGGTCGTGATTTTGT 57.898 45.000 0.00 0.00 0.00 2.83
2075 2127 2.871096 TTCCTCAGCCCGTAAAACAT 57.129 45.000 0.00 0.00 0.00 2.71
2107 2159 1.090052 GCCGCAGCTAAAATCGACCT 61.090 55.000 0.00 0.00 35.50 3.85
2178 2236 2.530701 AGGACGTGAGGAAGAAGATGT 58.469 47.619 0.00 0.00 0.00 3.06
2195 2253 1.486211 GAAGGTCGAGATGGGAAGGA 58.514 55.000 0.00 0.00 0.00 3.36
2369 2427 1.908483 GAATGGAGGAGTTCGGCCT 59.092 57.895 0.00 0.00 38.81 5.19
2483 2554 2.586792 GCCTGCGGTTCTCTCCAT 59.413 61.111 0.00 0.00 0.00 3.41
2485 2556 4.821589 CGGCCTGCGGTTCTCTCC 62.822 72.222 0.00 0.00 0.00 3.71
2592 2737 4.452733 CTTGCTCCCGTCCGTCCC 62.453 72.222 0.00 0.00 0.00 4.46
2644 2789 5.007385 ACCTGTATACGTGAAAGACCATC 57.993 43.478 0.00 0.00 0.00 3.51
2646 2791 3.119743 CGACCTGTATACGTGAAAGACCA 60.120 47.826 0.00 0.00 0.00 4.02
2673 2818 0.340208 AGGATTTCGGAGAGGACCCT 59.660 55.000 0.00 0.00 38.43 4.34
2679 2824 7.497249 ACTCATGAAAATAAGGATTTCGGAGAG 59.503 37.037 18.79 14.75 40.03 3.20
2701 2846 2.766313 CAAACATCCTGACCGAACTCA 58.234 47.619 0.00 0.00 0.00 3.41
2703 2848 1.202758 TGCAAACATCCTGACCGAACT 60.203 47.619 0.00 0.00 0.00 3.01
2710 2855 0.111061 AGGCACTGCAAACATCCTGA 59.889 50.000 2.82 0.00 37.18 3.86
2729 2875 5.048852 CACCCGACCCGTAAAATTTTTAAGA 60.049 40.000 9.06 0.00 0.00 2.10
2784 2933 3.184986 CCGTCGGTTTACAGTTTTAGGTG 59.815 47.826 2.08 0.00 0.00 4.00
2785 2934 3.181466 ACCGTCGGTTTACAGTTTTAGGT 60.181 43.478 12.23 0.00 27.29 3.08
2801 2950 3.909574 ACGAAATTGCAAAATAACCGTCG 59.090 39.130 1.71 6.57 0.00 5.12
2818 2967 3.687698 GCAGACCCTATAAAAGCACGAAA 59.312 43.478 0.00 0.00 0.00 3.46
2830 2980 2.962421 GAGCAACTCTAGCAGACCCTAT 59.038 50.000 0.00 0.00 0.00 2.57
2831 2981 2.024846 AGAGCAACTCTAGCAGACCCTA 60.025 50.000 0.00 0.00 39.28 3.53
2832 2982 1.190643 GAGCAACTCTAGCAGACCCT 58.809 55.000 0.00 0.00 0.00 4.34
2846 2996 9.630098 CTTTCAATTAAGCTTCAATAAGAGCAA 57.370 29.630 0.00 0.00 34.37 3.91
2910 3339 5.581126 AACAACGAACGGTACCATATAGA 57.419 39.130 13.54 0.00 0.00 1.98
2946 3375 7.148474 GGATGACGTTTTGTATTCACACTATGT 60.148 37.037 0.00 0.00 33.30 2.29
2949 3378 6.460781 AGGATGACGTTTTGTATTCACACTA 58.539 36.000 0.00 0.00 33.30 2.74
2962 3391 7.687941 ATGTATCTTCAAAAGGATGACGTTT 57.312 32.000 0.00 0.00 35.96 3.60
2988 3418 7.272037 ACCCACTAAACACTAAAATGTTGAG 57.728 36.000 2.07 2.07 44.03 3.02
2993 3423 5.074115 TGGGACCCACTAAACACTAAAATG 58.926 41.667 9.95 0.00 0.00 2.32
3035 3595 2.094906 GCCCCTTAAAACCGCTAACTTG 60.095 50.000 0.00 0.00 0.00 3.16
3041 3604 3.937778 TTATAGCCCCTTAAAACCGCT 57.062 42.857 0.00 0.00 0.00 5.52
3059 3622 3.689347 AGGTTGCTGCTGAATGACATTA 58.311 40.909 0.00 0.00 0.00 1.90
3076 3639 5.316987 AGCAAGCTAAATCAACACTAGGTT 58.683 37.500 0.00 0.00 41.47 3.50
3083 3646 4.826733 TCCTCAAAGCAAGCTAAATCAACA 59.173 37.500 0.00 0.00 0.00 3.33
3084 3647 5.376854 TCCTCAAAGCAAGCTAAATCAAC 57.623 39.130 0.00 0.00 0.00 3.18
3111 3674 0.324275 AACGGGCCATGGCAAATAGT 60.324 50.000 36.56 23.74 44.11 2.12
3176 3739 1.003116 GCGAATGCTGATCACCATCAC 60.003 52.381 3.98 2.07 33.80 3.06
3203 3766 0.756294 ATCTGTTCCACCACACGACA 59.244 50.000 0.00 0.00 0.00 4.35
3204 3767 2.736144 TATCTGTTCCACCACACGAC 57.264 50.000 0.00 0.00 0.00 4.34
3272 3835 2.354805 CCAGTTTTACTTCGAGAGGGGG 60.355 54.545 0.00 0.00 0.00 5.40
3274 3840 2.302157 ACCCAGTTTTACTTCGAGAGGG 59.698 50.000 0.00 0.00 39.66 4.30
3277 3843 4.100498 AGTCAACCCAGTTTTACTTCGAGA 59.900 41.667 0.00 0.00 0.00 4.04
3291 3857 4.374689 TGTAGGCATTTAAGTCAACCCA 57.625 40.909 0.00 0.00 0.00 4.51
3292 3858 5.715434 TTTGTAGGCATTTAAGTCAACCC 57.285 39.130 0.00 0.00 0.00 4.11
3293 3859 8.088365 AGAATTTTGTAGGCATTTAAGTCAACC 58.912 33.333 0.00 0.00 0.00 3.77
3294 3860 9.476202 AAGAATTTTGTAGGCATTTAAGTCAAC 57.524 29.630 0.00 0.00 0.00 3.18
3325 3892 7.368059 CAAGAGAAACCCATTTTGGTAAGTAC 58.632 38.462 0.00 0.00 37.76 2.73
3351 3918 0.108992 TACGCCGTTACCTGCAAGAG 60.109 55.000 0.00 0.00 34.07 2.85
3386 3953 2.203070 GGGATCGCAGCGGACAAT 60.203 61.111 16.42 0.00 0.00 2.71
3392 3959 3.032609 GTGATCGGGATCGCAGCG 61.033 66.667 9.06 9.06 45.14 5.18
3398 3965 0.742990 TGCGGTTTGTGATCGGGATC 60.743 55.000 1.69 1.69 38.29 3.36
3431 3998 0.458669 AGTCGGTGAACACGTTGTCT 59.541 50.000 0.00 0.00 0.00 3.41
3446 4013 4.838486 GAGGCAGCGGACGAGTCG 62.838 72.222 11.85 11.85 0.00 4.18
3489 4056 0.098376 GCTGAGAATGCGAGGCAAAG 59.902 55.000 0.00 0.00 43.62 2.77
3500 4067 3.645434 ACCTGAGATGAGAGCTGAGAAT 58.355 45.455 0.00 0.00 0.00 2.40
3501 4068 3.098774 ACCTGAGATGAGAGCTGAGAA 57.901 47.619 0.00 0.00 0.00 2.87
3506 4073 3.582208 ACTTGAAACCTGAGATGAGAGCT 59.418 43.478 0.00 0.00 0.00 4.09
3528 4095 4.469586 TCATATGTAGGTCTGCTTGGACAA 59.530 41.667 1.90 0.00 37.91 3.18
3552 4119 0.541392 TCGCCCATATGTCACAAGCT 59.459 50.000 1.24 0.00 0.00 3.74
3576 4143 2.159476 CCAAATGGACACAGATGAAGCG 60.159 50.000 0.00 0.00 37.39 4.68
3606 4173 1.805943 CAAATGGACTGCACATCGTCA 59.194 47.619 6.21 0.00 31.88 4.35
3611 4178 2.880443 AGAACCAAATGGACTGCACAT 58.120 42.857 6.42 0.00 38.94 3.21
3615 4182 2.229784 CAGGAAGAACCAAATGGACTGC 59.770 50.000 6.42 3.95 42.04 4.40
3644 4211 5.568620 ACCCAAGATATATTCAGGTGGAC 57.431 43.478 1.39 0.00 0.00 4.02
3645 4212 6.389869 AGAAACCCAAGATATATTCAGGTGGA 59.610 38.462 2.79 0.00 0.00 4.02
3646 4213 6.605119 AGAAACCCAAGATATATTCAGGTGG 58.395 40.000 2.79 0.00 0.00 4.61
3647 4214 8.525290 AAAGAAACCCAAGATATATTCAGGTG 57.475 34.615 2.79 0.00 0.00 4.00
3648 4215 8.971073 CAAAAGAAACCCAAGATATATTCAGGT 58.029 33.333 0.00 0.00 0.00 4.00
3649 4216 8.971073 ACAAAAGAAACCCAAGATATATTCAGG 58.029 33.333 0.00 0.00 0.00 3.86
3650 4217 9.793252 CACAAAAGAAACCCAAGATATATTCAG 57.207 33.333 0.00 0.00 0.00 3.02
3651 4218 8.250332 GCACAAAAGAAACCCAAGATATATTCA 58.750 33.333 0.00 0.00 0.00 2.57
3652 4219 8.470002 AGCACAAAAGAAACCCAAGATATATTC 58.530 33.333 0.00 0.00 0.00 1.75
3653 4220 8.366359 AGCACAAAAGAAACCCAAGATATATT 57.634 30.769 0.00 0.00 0.00 1.28
3682 4249 4.992951 ACGTAAAAGAAGCGGACATTAGTT 59.007 37.500 0.00 0.00 0.00 2.24
3690 4257 2.146954 CGCACGTAAAAGAAGCGGA 58.853 52.632 6.31 0.00 44.20 5.54
3731 4298 5.468746 ACATAATTACATACTTTGGCGCGAT 59.531 36.000 12.10 0.00 0.00 4.58
3757 4324 2.485426 ACACTCTCATTCATTTGCGTGG 59.515 45.455 0.00 0.00 0.00 4.94
3798 4365 4.082408 AGCATCACACACATTCCTTGATTG 60.082 41.667 0.00 0.00 0.00 2.67
3816 4383 5.160699 TCGCAACAGAATATTTCAGCATC 57.839 39.130 0.00 0.00 0.00 3.91
3817 4384 5.355071 TCTTCGCAACAGAATATTTCAGCAT 59.645 36.000 0.00 0.00 0.00 3.79
3939 4508 0.892755 TGCCCGAGATTACGTTGTCT 59.107 50.000 0.00 0.00 0.00 3.41
3944 4513 0.172803 GTGACTGCCCGAGATTACGT 59.827 55.000 0.00 0.00 0.00 3.57
3945 4514 0.456221 AGTGACTGCCCGAGATTACG 59.544 55.000 0.00 0.00 0.00 3.18
3949 4518 0.534412 CTGAAGTGACTGCCCGAGAT 59.466 55.000 0.00 0.00 0.00 2.75
3954 4523 0.247736 ATCGACTGAAGTGACTGCCC 59.752 55.000 0.00 0.00 0.00 5.36
3958 4527 4.340666 AGCATATCATCGACTGAAGTGACT 59.659 41.667 0.00 0.00 37.44 3.41
3966 4535 2.323059 CCACGAGCATATCATCGACTG 58.677 52.381 11.92 2.60 41.40 3.51
3973 4542 1.407618 ACTTACGCCACGAGCATATCA 59.592 47.619 0.00 0.00 44.04 2.15
4010 4579 2.169769 TGGGGCTACTCTTTCATAACCG 59.830 50.000 0.00 0.00 0.00 4.44
4018 4587 2.711547 AGTCTTTGTGGGGCTACTCTTT 59.288 45.455 0.00 0.00 0.00 2.52
4059 4628 5.329035 TGCAGATTTTATTTTGGCCTCTC 57.671 39.130 3.32 0.00 0.00 3.20
4060 4629 5.945144 ATGCAGATTTTATTTTGGCCTCT 57.055 34.783 3.32 0.00 0.00 3.69
4124 4693 2.091885 ACAGGGAGCACTGAAGGAAAAA 60.092 45.455 6.76 0.00 40.97 1.94
4200 4769 3.998341 TGTCGTAGTTTCCCTAATGTTGC 59.002 43.478 0.00 0.00 0.00 4.17
4208 4777 0.829182 ACCGGTGTCGTAGTTTCCCT 60.829 55.000 6.12 0.00 33.95 4.20
4217 4786 1.664306 GAAGAGGAACCGGTGTCGT 59.336 57.895 8.52 9.79 33.95 4.34
4218 4787 1.080025 GGAAGAGGAACCGGTGTCG 60.080 63.158 8.52 0.00 0.00 4.35
4222 4791 1.076192 TCGAGGAAGAGGAACCGGT 59.924 57.895 0.00 0.00 0.00 5.28
4224 4793 0.601558 TTGTCGAGGAAGAGGAACCG 59.398 55.000 0.00 0.00 0.00 4.44
4226 4795 4.516365 TTACTTGTCGAGGAAGAGGAAC 57.484 45.455 10.41 0.00 0.00 3.62
4294 4863 4.479619 GTTTCAGAAGATGAGCGCATTTT 58.520 39.130 11.47 4.98 39.68 1.82
4295 4864 3.119708 GGTTTCAGAAGATGAGCGCATTT 60.120 43.478 11.47 0.00 39.68 2.32
4298 4867 1.270785 TGGTTTCAGAAGATGAGCGCA 60.271 47.619 11.47 0.00 39.68 6.09
4326 4895 7.477144 TGTTATTGATTATAGCGGAGTTGTG 57.523 36.000 0.00 0.00 0.00 3.33
4333 4902 9.689075 CGTTGATTATGTTATTGATTATAGCGG 57.311 33.333 0.00 0.00 0.00 5.52
4346 4915 6.460781 AGTGGTGAAGTCGTTGATTATGTTA 58.539 36.000 0.00 0.00 0.00 2.41
4377 4946 2.158871 ACTCGGTTTTCACAAGCCAGTA 60.159 45.455 0.00 0.00 32.76 2.74
4380 4949 1.305201 GACTCGGTTTTCACAAGCCA 58.695 50.000 0.00 0.00 32.76 4.75
4383 4952 4.378459 GCCTTATGACTCGGTTTTCACAAG 60.378 45.833 0.00 0.00 0.00 3.16
4389 4958 2.084546 GCAGCCTTATGACTCGGTTTT 58.915 47.619 0.00 0.00 0.00 2.43
4394 4963 2.240500 GCGGCAGCCTTATGACTCG 61.241 63.158 10.54 0.00 37.42 4.18
4415 4984 0.884704 TGTGAGGAGACGCCAAAAGC 60.885 55.000 0.00 0.00 40.02 3.51
4419 4988 0.396435 AACATGTGAGGAGACGCCAA 59.604 50.000 0.00 0.00 40.02 4.52
4426 4995 5.885230 TGCAAAGATTAACATGTGAGGAG 57.115 39.130 0.00 0.00 0.00 3.69
4433 5002 9.577110 AGTTGATTACATGCAAAGATTAACATG 57.423 29.630 0.00 0.00 44.29 3.21
4434 5003 9.793252 GAGTTGATTACATGCAAAGATTAACAT 57.207 29.630 0.00 0.00 0.00 2.71
4439 5014 7.362401 GGTCTGAGTTGATTACATGCAAAGATT 60.362 37.037 0.00 0.00 0.00 2.40
4444 5019 4.650734 TGGTCTGAGTTGATTACATGCAA 58.349 39.130 0.00 0.00 0.00 4.08
4472 5047 6.356556 CCCACCTGAATATATCACTCAAACA 58.643 40.000 0.00 0.00 33.47 2.83
4473 5048 5.765182 CCCCACCTGAATATATCACTCAAAC 59.235 44.000 0.00 0.00 33.47 2.93
4480 5055 5.304686 GTGTTCCCCACCTGAATATATCA 57.695 43.478 0.00 0.00 38.18 2.15


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.