Multiple sequence alignment - TraesCS1A01G196500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G196500 chr1A 100.000 4590 0 0 1 4590 354938526 354933937 0.000000e+00 8477.0
1 TraesCS1A01G196500 chr1A 96.591 176 6 0 2682 2857 508278059 508278234 4.490000e-75 292.0
2 TraesCS1A01G196500 chr1A 96.591 176 6 0 2682 2857 508305385 508305560 4.490000e-75 292.0
3 TraesCS1A01G196500 chr1A 96.591 176 6 0 2682 2857 508310269 508310444 4.490000e-75 292.0
4 TraesCS1A01G196500 chr1A 96.591 176 6 0 2682 2857 508336983 508337158 4.490000e-75 292.0
5 TraesCS1A01G196500 chr1D 91.453 2726 105 50 1 2661 282949396 282946734 0.000000e+00 3626.0
6 TraesCS1A01G196500 chr1D 92.487 985 57 5 2887 3854 282946708 282945724 0.000000e+00 1393.0
7 TraesCS1A01G196500 chr1D 85.489 634 60 9 3832 4441 282945712 282945087 2.330000e-177 632.0
8 TraesCS1A01G196500 chr1B 92.857 1876 87 25 808 2659 384298405 384296553 0.000000e+00 2678.0
9 TraesCS1A01G196500 chr1B 89.138 1114 73 18 2874 3948 384296512 384295408 0.000000e+00 1343.0
10 TraesCS1A01G196500 chr1B 88.549 751 48 20 1 724 384299187 384298448 0.000000e+00 876.0
11 TraesCS1A01G196500 chr1B 91.379 348 28 2 4244 4590 384249360 384249014 4.160000e-130 475.0
12 TraesCS1A01G196500 chr1B 88.509 322 31 3 1 321 34777400 34777716 7.200000e-103 385.0
13 TraesCS1A01G196500 chr1B 88.509 322 31 3 1 321 34794728 34795044 7.200000e-103 385.0
14 TraesCS1A01G196500 chr2B 87.857 280 29 4 1 278 65473140 65473416 1.590000e-84 324.0
15 TraesCS1A01G196500 chr3A 98.851 174 2 0 2685 2858 718841226 718841399 1.240000e-80 311.0
16 TraesCS1A01G196500 chr3A 94.211 190 11 0 2678 2867 645761101 645760912 1.620000e-74 291.0
17 TraesCS1A01G196500 chr2A 97.143 175 5 0 2683 2857 778800569 778800743 3.470000e-76 296.0
18 TraesCS1A01G196500 chr2D 93.434 198 10 3 2675 2869 323517507 323517310 1.620000e-74 291.0
19 TraesCS1A01G196500 chr3B 92.893 197 11 3 2670 2864 39614192 39613997 2.700000e-72 283.0
20 TraesCS1A01G196500 chr3B 100.000 29 0 0 4175 4203 368928941 368928969 2.000000e-03 54.7
21 TraesCS1A01G196500 chr4A 85.417 240 24 5 1 240 196609485 196609257 5.930000e-59 239.0
22 TraesCS1A01G196500 chr4A 89.916 119 10 2 327 444 196609224 196609107 7.950000e-33 152.0
23 TraesCS1A01G196500 chr4B 81.119 286 48 5 4301 4585 568716856 568717136 1.660000e-54 224.0
24 TraesCS1A01G196500 chr5B 87.903 124 13 2 324 446 397964580 397964702 1.330000e-30 145.0
25 TraesCS1A01G196500 chr5B 92.857 42 3 0 3956 3997 69409954 69409913 1.380000e-05 62.1
26 TraesCS1A01G196500 chr5D 77.124 153 27 4 4174 4322 397195666 397195518 1.060000e-11 82.4
27 TraesCS1A01G196500 chr7A 94.444 36 2 0 4173 4208 74932203 74932168 6.420000e-04 56.5
28 TraesCS1A01G196500 chr4D 100.000 29 0 0 4171 4199 502415251 502415223 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G196500 chr1A 354933937 354938526 4589 True 8477.000000 8477 100.000000 1 4590 1 chr1A.!!$R1 4589
1 TraesCS1A01G196500 chr1D 282945087 282949396 4309 True 1883.666667 3626 89.809667 1 4441 3 chr1D.!!$R1 4440
2 TraesCS1A01G196500 chr1B 384295408 384299187 3779 True 1632.333333 2678 90.181333 1 3948 3 chr1B.!!$R2 3947

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
241 248 0.106116 GGACCGGATACAGGAGAGGT 60.106 60.0 9.46 0.00 34.83 3.85 F
802 833 0.327259 ATGGAGCTGTGATGTGTGCT 59.673 50.0 0.00 0.00 38.59 4.40 F
1185 1223 0.394080 ATTCTTGCTGCAGCTCCTCC 60.394 55.0 36.61 10.03 42.66 4.30 F
1390 1440 0.723414 TCGTCGACGACAGATGGTAC 59.277 55.0 34.97 0.00 44.22 3.34 F
2771 2863 0.394938 ATAACCCACGTCAGCACACA 59.605 50.0 0.00 0.00 0.00 3.72 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1767 1823 0.034283 TGAGTGGCAATGGCATGCTA 60.034 50.000 18.92 12.99 45.68 3.49 R
2752 2844 0.394938 TGTGTGCTGACGTGGGTTAT 59.605 50.000 0.00 0.00 0.00 1.89 R
2753 2845 0.531090 GTGTGTGCTGACGTGGGTTA 60.531 55.000 0.00 0.00 0.00 2.85 R
3144 3240 1.005215 ACAGAAGAGAATGCAAGGGGG 59.995 52.381 0.00 0.00 0.00 5.40 R
4515 4690 0.322008 GAAGCTCACCCTCAACCTGG 60.322 60.000 0.00 0.00 0.00 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
186 187 5.906113 TCAGGAGAAAGAGACATACTGAC 57.094 43.478 0.00 0.00 0.00 3.51
190 191 4.335874 GGAGAAAGAGACATACTGACGCTA 59.664 45.833 0.00 0.00 0.00 4.26
191 192 5.009210 GGAGAAAGAGACATACTGACGCTAT 59.991 44.000 0.00 0.00 0.00 2.97
194 195 5.584253 AAGAGACATACTGACGCTATTGT 57.416 39.130 0.00 0.00 0.00 2.71
196 197 6.694877 AGAGACATACTGACGCTATTGTTA 57.305 37.500 0.00 0.00 0.00 2.41
197 198 7.278461 AGAGACATACTGACGCTATTGTTAT 57.722 36.000 0.00 0.00 0.00 1.89
198 199 8.392372 AGAGACATACTGACGCTATTGTTATA 57.608 34.615 0.00 0.00 0.00 0.98
199 200 8.847196 AGAGACATACTGACGCTATTGTTATAA 58.153 33.333 0.00 0.00 0.00 0.98
201 202 9.982651 AGACATACTGACGCTATTGTTATAATT 57.017 29.630 0.00 0.00 0.00 1.40
241 248 0.106116 GGACCGGATACAGGAGAGGT 60.106 60.000 9.46 0.00 34.83 3.85
325 332 4.982241 TGATCTTTCAGACCAGGTCTTT 57.018 40.909 20.57 0.00 41.37 2.52
330 337 4.103153 TCTTTCAGACCAGGTCTTTGTGAT 59.897 41.667 20.57 0.00 41.37 3.06
369 376 4.664389 CGAGAAAGCGAGAAGTTGTTTAGC 60.664 45.833 0.00 0.00 0.00 3.09
402 409 1.913778 TGGAATGTGATGCTTGTGCT 58.086 45.000 0.00 0.00 40.48 4.40
443 450 7.829211 AGTTAGCTGAGCAAATCCTTTGTATTA 59.171 33.333 7.39 0.00 42.56 0.98
444 451 8.624776 GTTAGCTGAGCAAATCCTTTGTATTAT 58.375 33.333 7.39 0.00 42.56 1.28
445 452 7.651027 AGCTGAGCAAATCCTTTGTATTATT 57.349 32.000 7.39 0.00 42.56 1.40
490 511 1.599071 GAGGATGTGTGTGTGTGTGTG 59.401 52.381 0.00 0.00 0.00 3.82
530 551 5.163571 ACGCAGATATGATGTCTATAGCAGG 60.164 44.000 0.00 0.00 0.00 4.85
532 553 5.362143 GCAGATATGATGTCTATAGCAGGGA 59.638 44.000 0.00 0.00 0.00 4.20
546 567 0.944311 CAGGGACGTTTGGTGTCGAG 60.944 60.000 0.00 0.00 37.22 4.04
549 570 2.654912 GACGTTTGGTGTCGAGCGG 61.655 63.158 0.00 0.00 35.66 5.52
550 571 4.072088 CGTTTGGTGTCGAGCGGC 62.072 66.667 0.00 0.00 0.00 6.53
551 572 2.665185 GTTTGGTGTCGAGCGGCT 60.665 61.111 0.00 0.00 0.00 5.52
555 584 2.508663 GGTGTCGAGCGGCTTACC 60.509 66.667 2.97 7.39 0.00 2.85
582 611 5.568620 ATGTGGAGAGAGTTTTGTTACCT 57.431 39.130 0.00 0.00 0.00 3.08
584 613 5.123227 TGTGGAGAGAGTTTTGTTACCTTG 58.877 41.667 0.00 0.00 0.00 3.61
585 614 5.104693 TGTGGAGAGAGTTTTGTTACCTTGA 60.105 40.000 0.00 0.00 0.00 3.02
587 616 6.147985 GTGGAGAGAGTTTTGTTACCTTGATC 59.852 42.308 0.00 0.00 0.00 2.92
588 617 6.043243 TGGAGAGAGTTTTGTTACCTTGATCT 59.957 38.462 0.00 0.00 0.00 2.75
605 635 6.825721 CCTTGATCTTTGTAGGCTGTATCTTT 59.174 38.462 0.00 0.00 0.00 2.52
637 667 7.502226 TGAGAGAAAAGAAGTTGCTCCATTTTA 59.498 33.333 0.00 0.00 0.00 1.52
638 668 8.237811 AGAGAAAAGAAGTTGCTCCATTTTAA 57.762 30.769 0.00 0.00 0.00 1.52
651 682 5.009110 GCTCCATTTTAAGGCTTACTCCATC 59.991 44.000 6.43 0.00 0.00 3.51
682 713 5.059833 GGGAGCACAAGATTAAGACCATAG 58.940 45.833 0.00 0.00 0.00 2.23
683 714 4.513318 GGAGCACAAGATTAAGACCATAGC 59.487 45.833 0.00 0.00 0.00 2.97
684 715 5.363939 GAGCACAAGATTAAGACCATAGCT 58.636 41.667 0.00 0.00 0.00 3.32
685 716 5.749462 AGCACAAGATTAAGACCATAGCTT 58.251 37.500 0.00 0.00 0.00 3.74
714 745 3.278574 TGTAACCCATCAAGTATGCTGC 58.721 45.455 0.00 0.00 33.92 5.25
724 755 5.772825 TCAAGTATGCTGCTGTTTTTCTT 57.227 34.783 0.00 0.00 0.00 2.52
725 756 6.147864 TCAAGTATGCTGCTGTTTTTCTTT 57.852 33.333 0.00 0.00 0.00 2.52
726 757 6.572519 TCAAGTATGCTGCTGTTTTTCTTTT 58.427 32.000 0.00 0.00 0.00 2.27
727 758 6.697019 TCAAGTATGCTGCTGTTTTTCTTTTC 59.303 34.615 0.00 0.00 0.00 2.29
728 759 6.396829 AGTATGCTGCTGTTTTTCTTTTCT 57.603 33.333 0.00 0.00 0.00 2.52
729 760 6.809869 AGTATGCTGCTGTTTTTCTTTTCTT 58.190 32.000 0.00 0.00 0.00 2.52
730 761 7.267857 AGTATGCTGCTGTTTTTCTTTTCTTT 58.732 30.769 0.00 0.00 0.00 2.52
731 762 6.990341 ATGCTGCTGTTTTTCTTTTCTTTT 57.010 29.167 0.00 0.00 0.00 2.27
732 763 6.799926 TGCTGCTGTTTTTCTTTTCTTTTT 57.200 29.167 0.00 0.00 0.00 1.94
779 810 1.134946 GTTGGTGTTGAACAGCTGCTT 59.865 47.619 25.31 7.47 46.03 3.91
789 820 0.959372 ACAGCTGCTTCACATGGAGC 60.959 55.000 15.27 5.11 46.86 4.70
790 821 4.315588 GCTGCTTCACATGGAGCT 57.684 55.556 13.30 0.00 43.88 4.09
800 831 1.817357 ACATGGAGCTGTGATGTGTG 58.183 50.000 0.00 0.00 0.00 3.82
801 832 0.450583 CATGGAGCTGTGATGTGTGC 59.549 55.000 0.00 0.00 0.00 4.57
802 833 0.327259 ATGGAGCTGTGATGTGTGCT 59.673 50.000 0.00 0.00 38.59 4.40
803 834 0.604511 TGGAGCTGTGATGTGTGCTG 60.605 55.000 0.00 0.00 35.76 4.41
804 835 1.303799 GGAGCTGTGATGTGTGCTGG 61.304 60.000 0.00 0.00 35.76 4.85
805 836 1.919956 GAGCTGTGATGTGTGCTGGC 61.920 60.000 0.00 0.00 35.76 4.85
806 837 2.986306 GCTGTGATGTGTGCTGGCC 61.986 63.158 0.00 0.00 0.00 5.36
834 865 2.353610 CCCTGCTGAATGGCAACCC 61.354 63.158 0.00 0.00 41.94 4.11
866 897 1.674057 CGGATACATCCTGGCCTCC 59.326 63.158 3.32 0.00 44.93 4.30
884 915 1.226974 CGACTCCTGGCCACATACG 60.227 63.158 0.00 0.23 0.00 3.06
893 924 2.885676 GCCACATACGCCTGCATCG 61.886 63.158 6.92 6.92 0.00 3.84
939 977 3.506096 CGCATCAGTGGCAGCCAG 61.506 66.667 16.83 3.93 32.34 4.85
1020 1058 2.743928 GCCGCGATGATGGGGATC 60.744 66.667 8.23 0.00 44.30 3.36
1185 1223 0.394080 ATTCTTGCTGCAGCTCCTCC 60.394 55.000 36.61 10.03 42.66 4.30
1348 1386 2.356313 CCAGCGTCAGTGCTCGTT 60.356 61.111 8.73 1.42 45.23 3.85
1390 1440 0.723414 TCGTCGACGACAGATGGTAC 59.277 55.000 34.97 0.00 44.22 3.34
1392 1442 1.789410 CGTCGACGACAGATGGTACAC 60.789 57.143 33.35 0.00 42.10 2.90
1416 1472 7.812191 CACAGTATATTCTTATCCTCTGCACTC 59.188 40.741 0.00 0.00 0.00 3.51
1767 1823 2.832129 CACATGTACTCTACCACCACCT 59.168 50.000 0.00 0.00 0.00 4.00
1768 1824 4.021229 CACATGTACTCTACCACCACCTA 58.979 47.826 0.00 0.00 0.00 3.08
1793 1849 1.310933 CCATTGCCACTCAGTCCTGC 61.311 60.000 0.00 0.00 0.00 4.85
2024 2092 4.430765 TTCGTCGCCTCCTTCGCC 62.431 66.667 0.00 0.00 0.00 5.54
2151 2219 9.737427 AATTCATCACTATGTCTTTCTACTACG 57.263 33.333 0.00 0.00 34.50 3.51
2152 2220 7.860918 TCATCACTATGTCTTTCTACTACGT 57.139 36.000 0.00 0.00 34.50 3.57
2154 2222 9.387257 TCATCACTATGTCTTTCTACTACGTAA 57.613 33.333 0.00 0.00 34.50 3.18
2155 2223 9.435802 CATCACTATGTCTTTCTACTACGTAAC 57.564 37.037 0.00 0.00 0.00 2.50
2157 2225 9.170734 TCACTATGTCTTTCTACTACGTAACAT 57.829 33.333 9.48 9.48 0.00 2.71
2203 2278 9.036980 ACAGTTAAGAAGATACCAATACAGACT 57.963 33.333 0.00 0.00 0.00 3.24
2241 2316 9.408648 TGTACAGGGTTTAGTATTACTACTACC 57.591 37.037 18.05 18.05 39.59 3.18
2272 2347 2.479049 GCATTTGCCTGACTACAGCATG 60.479 50.000 0.00 0.00 42.25 4.06
2348 2424 3.503363 ATCTGCTGCGCGCTTTCC 61.503 61.111 33.29 17.22 40.11 3.13
2427 2503 5.673068 GCGCTAGGTTTTAAGCTAAACTTCC 60.673 44.000 11.01 0.01 39.97 3.46
2448 2524 6.363167 TCCCTGCAATCAAATTCTGAATTT 57.637 33.333 19.79 19.79 41.57 1.82
2449 2525 7.479352 TCCCTGCAATCAAATTCTGAATTTA 57.521 32.000 23.64 14.50 38.97 1.40
2484 2560 2.226330 ACAGTTGCCTTGTAATTGCGA 58.774 42.857 0.00 0.00 0.00 5.10
2516 2592 2.630098 TCTGCTCTGCTCTAACACAAGT 59.370 45.455 0.00 0.00 0.00 3.16
2517 2593 2.735663 CTGCTCTGCTCTAACACAAGTG 59.264 50.000 0.00 0.00 0.00 3.16
2518 2594 2.072298 GCTCTGCTCTAACACAAGTGG 58.928 52.381 5.08 0.00 34.19 4.00
2519 2595 2.548920 GCTCTGCTCTAACACAAGTGGT 60.549 50.000 5.08 0.00 34.19 4.16
2532 2608 2.635427 ACAAGTGGTTGGTTGGTTTTGT 59.365 40.909 0.00 0.00 38.07 2.83
2590 2666 2.125106 GGTGACGTCCTGATGGGC 60.125 66.667 14.12 0.00 34.39 5.36
2649 2725 6.149973 TCAATGTTCAAGCAGAGAAAGGTATG 59.850 38.462 0.00 0.00 0.00 2.39
2661 2737 7.056635 CAGAGAAAGGTATGTGTAATTCCCAT 58.943 38.462 0.00 0.00 0.00 4.00
2662 2738 7.557719 CAGAGAAAGGTATGTGTAATTCCCATT 59.442 37.037 0.00 0.00 0.00 3.16
2663 2739 7.557719 AGAGAAAGGTATGTGTAATTCCCATTG 59.442 37.037 0.00 0.00 0.00 2.82
2664 2740 7.182060 AGAAAGGTATGTGTAATTCCCATTGT 58.818 34.615 0.00 0.00 0.00 2.71
2665 2741 7.673926 AGAAAGGTATGTGTAATTCCCATTGTT 59.326 33.333 0.00 0.00 0.00 2.83
2666 2742 8.887264 AAAGGTATGTGTAATTCCCATTGTTA 57.113 30.769 0.00 0.00 0.00 2.41
2668 2744 8.691661 AGGTATGTGTAATTCCCATTGTTATC 57.308 34.615 0.00 0.00 0.00 1.75
2681 2773 5.990996 CCCATTGTTATCTTGCAACACTTTT 59.009 36.000 0.00 0.00 35.70 2.27
2701 2793 5.818678 TTTTTGGGAGTAGCTAGAACTCA 57.181 39.130 20.80 4.26 44.25 3.41
2702 2794 6.374417 TTTTTGGGAGTAGCTAGAACTCAT 57.626 37.500 20.80 0.00 44.25 2.90
2703 2795 5.599999 TTTGGGAGTAGCTAGAACTCATC 57.400 43.478 20.80 14.72 44.25 2.92
2704 2796 4.528076 TGGGAGTAGCTAGAACTCATCT 57.472 45.455 20.80 0.00 44.25 2.90
2705 2797 5.648330 TGGGAGTAGCTAGAACTCATCTA 57.352 43.478 20.80 6.15 44.25 1.98
2723 2815 7.348080 TCATCTAGATGAGACGTAATTTGGT 57.652 36.000 27.93 0.00 42.42 3.67
2724 2816 7.426410 TCATCTAGATGAGACGTAATTTGGTC 58.574 38.462 27.93 1.46 42.42 4.02
2725 2817 7.285629 TCATCTAGATGAGACGTAATTTGGTCT 59.714 37.037 27.93 9.96 45.71 3.85
2733 2825 6.910536 AGACGTAATTTGGTCTCATTCATC 57.089 37.500 5.52 0.00 39.18 2.92
2734 2826 6.644347 AGACGTAATTTGGTCTCATTCATCT 58.356 36.000 5.52 0.00 39.18 2.90
2735 2827 6.536582 AGACGTAATTTGGTCTCATTCATCTG 59.463 38.462 5.52 0.00 39.18 2.90
2736 2828 6.406370 ACGTAATTTGGTCTCATTCATCTGA 58.594 36.000 0.00 0.00 0.00 3.27
2737 2829 6.878923 ACGTAATTTGGTCTCATTCATCTGAA 59.121 34.615 0.00 0.00 38.56 3.02
2738 2830 7.390440 ACGTAATTTGGTCTCATTCATCTGAAA 59.610 33.333 0.00 0.00 37.61 2.69
2739 2831 8.236586 CGTAATTTGGTCTCATTCATCTGAAAA 58.763 33.333 0.00 0.00 37.61 2.29
2740 2832 9.912634 GTAATTTGGTCTCATTCATCTGAAAAA 57.087 29.630 0.00 0.00 37.61 1.94
2741 2833 8.822652 AATTTGGTCTCATTCATCTGAAAAAC 57.177 30.769 0.00 0.00 37.61 2.43
2742 2834 6.957920 TTGGTCTCATTCATCTGAAAAACA 57.042 33.333 0.00 0.00 37.61 2.83
2743 2835 6.957920 TGGTCTCATTCATCTGAAAAACAA 57.042 33.333 0.00 0.00 37.61 2.83
2744 2836 6.973843 TGGTCTCATTCATCTGAAAAACAAG 58.026 36.000 0.00 0.00 37.61 3.16
2745 2837 6.772233 TGGTCTCATTCATCTGAAAAACAAGA 59.228 34.615 0.00 0.00 37.61 3.02
2746 2838 7.285172 TGGTCTCATTCATCTGAAAAACAAGAA 59.715 33.333 0.00 0.00 37.61 2.52
2747 2839 7.592903 GGTCTCATTCATCTGAAAAACAAGAAC 59.407 37.037 0.00 0.00 37.61 3.01
2748 2840 7.322222 GTCTCATTCATCTGAAAAACAAGAACG 59.678 37.037 0.00 0.00 37.61 3.95
2749 2841 6.437928 TCATTCATCTGAAAAACAAGAACGG 58.562 36.000 0.00 0.00 37.61 4.44
2750 2842 6.262049 TCATTCATCTGAAAAACAAGAACGGA 59.738 34.615 0.00 0.00 37.61 4.69
2751 2843 6.633500 TTCATCTGAAAAACAAGAACGGAT 57.367 33.333 0.00 0.00 0.00 4.18
2752 2844 7.737972 TTCATCTGAAAAACAAGAACGGATA 57.262 32.000 0.00 0.00 0.00 2.59
2753 2845 7.921786 TCATCTGAAAAACAAGAACGGATAT 57.078 32.000 0.00 0.00 0.00 1.63
2754 2846 9.443323 TTCATCTGAAAAACAAGAACGGATATA 57.557 29.630 0.00 0.00 0.00 0.86
2755 2847 9.443323 TCATCTGAAAAACAAGAACGGATATAA 57.557 29.630 0.00 0.00 0.00 0.98
2756 2848 9.490663 CATCTGAAAAACAAGAACGGATATAAC 57.509 33.333 0.00 0.00 0.00 1.89
2757 2849 8.036273 TCTGAAAAACAAGAACGGATATAACC 57.964 34.615 0.00 0.00 0.00 2.85
2758 2850 7.120138 TCTGAAAAACAAGAACGGATATAACCC 59.880 37.037 0.00 0.00 0.00 4.11
2759 2851 6.715718 TGAAAAACAAGAACGGATATAACCCA 59.284 34.615 0.00 0.00 0.00 4.51
2760 2852 6.505044 AAAACAAGAACGGATATAACCCAC 57.495 37.500 0.00 0.00 0.00 4.61
2761 2853 3.788937 ACAAGAACGGATATAACCCACG 58.211 45.455 0.00 0.00 0.00 4.94
2762 2854 3.196254 ACAAGAACGGATATAACCCACGT 59.804 43.478 0.00 0.00 39.74 4.49
2763 2855 3.722728 AGAACGGATATAACCCACGTC 57.277 47.619 0.00 0.00 36.69 4.34
2764 2856 3.025978 AGAACGGATATAACCCACGTCA 58.974 45.455 0.00 0.00 36.69 4.35
2765 2857 3.067742 AGAACGGATATAACCCACGTCAG 59.932 47.826 0.00 0.00 36.69 3.51
2766 2858 1.068127 ACGGATATAACCCACGTCAGC 59.932 52.381 0.00 0.00 31.39 4.26
2767 2859 1.067974 CGGATATAACCCACGTCAGCA 59.932 52.381 0.00 0.00 0.00 4.41
2768 2860 2.480845 GGATATAACCCACGTCAGCAC 58.519 52.381 0.00 0.00 0.00 4.40
2769 2861 2.159014 GGATATAACCCACGTCAGCACA 60.159 50.000 0.00 0.00 0.00 4.57
2770 2862 2.373540 TATAACCCACGTCAGCACAC 57.626 50.000 0.00 0.00 0.00 3.82
2771 2863 0.394938 ATAACCCACGTCAGCACACA 59.605 50.000 0.00 0.00 0.00 3.72
2772 2864 0.531090 TAACCCACGTCAGCACACAC 60.531 55.000 0.00 0.00 0.00 3.82
2773 2865 3.337889 CCCACGTCAGCACACACG 61.338 66.667 0.00 0.00 41.90 4.49
2774 2866 4.000557 CCACGTCAGCACACACGC 62.001 66.667 0.00 0.00 39.73 5.34
2775 2867 3.261216 CACGTCAGCACACACGCA 61.261 61.111 0.00 0.00 39.73 5.24
2776 2868 2.280119 ACGTCAGCACACACGCAT 60.280 55.556 0.00 0.00 39.73 4.73
2777 2869 2.310233 ACGTCAGCACACACGCATC 61.310 57.895 0.00 0.00 39.73 3.91
2778 2870 2.023771 CGTCAGCACACACGCATCT 61.024 57.895 0.00 0.00 0.00 2.90
2779 2871 1.560004 CGTCAGCACACACGCATCTT 61.560 55.000 0.00 0.00 0.00 2.40
2780 2872 1.428448 GTCAGCACACACGCATCTTA 58.572 50.000 0.00 0.00 0.00 2.10
2781 2873 2.002586 GTCAGCACACACGCATCTTAT 58.997 47.619 0.00 0.00 0.00 1.73
2782 2874 3.186909 GTCAGCACACACGCATCTTATA 58.813 45.455 0.00 0.00 0.00 0.98
2783 2875 3.243877 GTCAGCACACACGCATCTTATAG 59.756 47.826 0.00 0.00 0.00 1.31
2784 2876 2.033407 CAGCACACACGCATCTTATAGC 60.033 50.000 0.00 0.00 0.00 2.97
2785 2877 1.933181 GCACACACGCATCTTATAGCA 59.067 47.619 0.00 0.00 0.00 3.49
2786 2878 2.545526 GCACACACGCATCTTATAGCAT 59.454 45.455 0.00 0.00 0.00 3.79
2787 2879 3.363378 GCACACACGCATCTTATAGCATC 60.363 47.826 0.00 0.00 0.00 3.91
2788 2880 3.803778 CACACACGCATCTTATAGCATCA 59.196 43.478 0.00 0.00 0.00 3.07
2789 2881 3.804325 ACACACGCATCTTATAGCATCAC 59.196 43.478 0.00 0.00 0.00 3.06
2790 2882 3.803778 CACACGCATCTTATAGCATCACA 59.196 43.478 0.00 0.00 0.00 3.58
2791 2883 4.450080 CACACGCATCTTATAGCATCACAT 59.550 41.667 0.00 0.00 0.00 3.21
2792 2884 4.687948 ACACGCATCTTATAGCATCACATC 59.312 41.667 0.00 0.00 0.00 3.06
2793 2885 4.092529 CACGCATCTTATAGCATCACATCC 59.907 45.833 0.00 0.00 0.00 3.51
2794 2886 4.248058 CGCATCTTATAGCATCACATCCA 58.752 43.478 0.00 0.00 0.00 3.41
2795 2887 4.692155 CGCATCTTATAGCATCACATCCAA 59.308 41.667 0.00 0.00 0.00 3.53
2796 2888 5.353400 CGCATCTTATAGCATCACATCCAAT 59.647 40.000 0.00 0.00 0.00 3.16
2797 2889 6.552629 GCATCTTATAGCATCACATCCAATG 58.447 40.000 0.00 0.00 0.00 2.82
2798 2890 6.404403 GCATCTTATAGCATCACATCCAATGG 60.404 42.308 0.00 0.00 33.60 3.16
2799 2891 5.005740 TCTTATAGCATCACATCCAATGGC 58.994 41.667 0.00 0.00 33.60 4.40
2800 2892 3.520691 ATAGCATCACATCCAATGGCT 57.479 42.857 0.00 0.00 33.60 4.75
2801 2893 4.645863 ATAGCATCACATCCAATGGCTA 57.354 40.909 0.00 0.00 33.60 3.93
2802 2894 3.520691 AGCATCACATCCAATGGCTAT 57.479 42.857 0.00 0.00 33.60 2.97
2803 2895 4.645863 AGCATCACATCCAATGGCTATA 57.354 40.909 0.00 0.00 33.60 1.31
2804 2896 4.989277 AGCATCACATCCAATGGCTATAA 58.011 39.130 0.00 0.00 33.60 0.98
2805 2897 5.387788 AGCATCACATCCAATGGCTATAAA 58.612 37.500 0.00 0.00 33.60 1.40
2806 2898 5.834742 AGCATCACATCCAATGGCTATAAAA 59.165 36.000 0.00 0.00 33.60 1.52
2807 2899 6.015688 AGCATCACATCCAATGGCTATAAAAG 60.016 38.462 0.00 0.00 33.60 2.27
2808 2900 6.684686 CATCACATCCAATGGCTATAAAAGG 58.315 40.000 0.00 0.00 33.60 3.11
2809 2901 5.765510 TCACATCCAATGGCTATAAAAGGT 58.234 37.500 0.00 0.00 33.60 3.50
2810 2902 5.593909 TCACATCCAATGGCTATAAAAGGTG 59.406 40.000 0.00 0.00 33.60 4.00
2811 2903 5.593909 CACATCCAATGGCTATAAAAGGTGA 59.406 40.000 0.00 0.00 33.60 4.02
2812 2904 6.096705 CACATCCAATGGCTATAAAAGGTGAA 59.903 38.462 0.00 0.00 33.60 3.18
2813 2905 6.840705 ACATCCAATGGCTATAAAAGGTGAAT 59.159 34.615 0.00 0.00 33.60 2.57
2814 2906 6.713762 TCCAATGGCTATAAAAGGTGAATG 57.286 37.500 0.00 0.00 0.00 2.67
2815 2907 6.430864 TCCAATGGCTATAAAAGGTGAATGA 58.569 36.000 0.00 0.00 0.00 2.57
2816 2908 6.547141 TCCAATGGCTATAAAAGGTGAATGAG 59.453 38.462 0.00 0.00 0.00 2.90
2817 2909 6.547141 CCAATGGCTATAAAAGGTGAATGAGA 59.453 38.462 0.00 0.00 0.00 3.27
2818 2910 7.420800 CAATGGCTATAAAAGGTGAATGAGAC 58.579 38.462 0.00 0.00 0.00 3.36
2819 2911 5.437060 TGGCTATAAAAGGTGAATGAGACC 58.563 41.667 0.00 0.00 0.00 3.85
2820 2912 5.045213 TGGCTATAAAAGGTGAATGAGACCA 60.045 40.000 0.00 0.00 35.76 4.02
2821 2913 5.885912 GGCTATAAAAGGTGAATGAGACCAA 59.114 40.000 0.00 0.00 35.76 3.67
2822 2914 6.377146 GGCTATAAAAGGTGAATGAGACCAAA 59.623 38.462 0.00 0.00 35.76 3.28
2823 2915 7.251281 GCTATAAAAGGTGAATGAGACCAAAC 58.749 38.462 0.00 0.00 35.76 2.93
2824 2916 7.121315 GCTATAAAAGGTGAATGAGACCAAACT 59.879 37.037 0.00 0.00 35.76 2.66
2825 2917 9.667107 CTATAAAAGGTGAATGAGACCAAACTA 57.333 33.333 0.00 0.00 35.76 2.24
2826 2918 8.934023 ATAAAAGGTGAATGAGACCAAACTAA 57.066 30.769 0.00 0.00 35.76 2.24
2827 2919 7.654022 AAAAGGTGAATGAGACCAAACTAAA 57.346 32.000 0.00 0.00 35.76 1.85
2828 2920 7.839680 AAAGGTGAATGAGACCAAACTAAAT 57.160 32.000 0.00 0.00 35.76 1.40
2829 2921 7.454260 AAGGTGAATGAGACCAAACTAAATC 57.546 36.000 0.00 0.00 35.76 2.17
2830 2922 6.784031 AGGTGAATGAGACCAAACTAAATCT 58.216 36.000 0.00 0.00 35.76 2.40
2831 2923 6.881602 AGGTGAATGAGACCAAACTAAATCTC 59.118 38.462 0.00 0.00 38.46 2.75
2838 2930 8.595362 TGAGACCAAACTAAATCTCATCTAGA 57.405 34.615 0.00 0.00 41.99 2.43
2840 2932 9.474920 GAGACCAAACTAAATCTCATCTAGATG 57.525 37.037 24.32 24.32 44.56 2.90
2841 2933 9.206690 AGACCAAACTAAATCTCATCTAGATGA 57.793 33.333 29.17 29.17 44.56 2.92
2857 2949 6.343226 CTAGATGAGTTCTAGCAAAACTGC 57.657 41.667 0.32 0.00 45.63 4.40
2858 2950 4.645535 AGATGAGTTCTAGCAAAACTGCA 58.354 39.130 0.32 0.00 37.10 4.41
2859 2951 4.453819 AGATGAGTTCTAGCAAAACTGCAC 59.546 41.667 0.32 0.00 37.10 4.57
2860 2952 3.808728 TGAGTTCTAGCAAAACTGCACT 58.191 40.909 0.32 0.00 37.10 4.40
2861 2953 4.199310 TGAGTTCTAGCAAAACTGCACTT 58.801 39.130 0.32 0.00 37.10 3.16
2862 2954 4.640201 TGAGTTCTAGCAAAACTGCACTTT 59.360 37.500 0.32 0.00 37.10 2.66
2863 2955 5.125417 TGAGTTCTAGCAAAACTGCACTTTT 59.875 36.000 0.32 0.00 37.10 2.27
2864 2956 5.965922 AGTTCTAGCAAAACTGCACTTTTT 58.034 33.333 1.79 0.00 35.68 1.94
3020 3116 2.014857 TCGACATTCTCCCTGTACTCG 58.985 52.381 0.00 0.00 0.00 4.18
3048 3144 1.338136 CCTAGGACGCCTGATTGGGT 61.338 60.000 1.05 0.00 34.61 4.51
3116 3212 1.565305 CGTTGGCTCTGAGCATAGTC 58.435 55.000 28.95 13.13 44.75 2.59
3170 3266 3.969287 TGCATTCTCTTCTGTGTAGCT 57.031 42.857 0.00 0.00 0.00 3.32
3256 3353 2.251642 AAACACTTCGCTGACGGCC 61.252 57.895 0.00 0.00 40.63 6.13
3283 3380 0.400213 TTGTTCTGACGGGCCTGATT 59.600 50.000 21.41 0.00 0.00 2.57
3381 3478 6.568653 GCTTCCAGGTAAACTTGATGAAACTC 60.569 42.308 0.00 0.00 0.00 3.01
3404 3501 0.179000 GATCCTGTCCCTGCGTTCAT 59.821 55.000 0.00 0.00 0.00 2.57
3536 3639 3.513225 CCGGCATTTTCGGCTCAT 58.487 55.556 0.00 0.00 41.07 2.90
3551 3654 2.485903 GCTCATTGATCTGCTCCTCTG 58.514 52.381 0.00 0.00 0.00 3.35
3553 3656 1.835531 TCATTGATCTGCTCCTCTGCA 59.164 47.619 0.00 0.00 41.05 4.41
3684 3790 4.707448 TGGTAAGTGCTTGGAGAACAAAAA 59.293 37.500 0.00 0.00 38.91 1.94
3697 3803 6.827762 TGGAGAACAAAAATGCAAAATTTCCT 59.172 30.769 0.00 0.00 0.00 3.36
3698 3804 7.338957 TGGAGAACAAAAATGCAAAATTTCCTT 59.661 29.630 0.00 0.00 0.00 3.36
3699 3805 7.644945 GGAGAACAAAAATGCAAAATTTCCTTG 59.355 33.333 0.00 0.00 0.00 3.61
3700 3806 7.482474 AGAACAAAAATGCAAAATTTCCTTGG 58.518 30.769 0.00 0.00 0.00 3.61
3740 3860 1.268743 GCAACAAGTCAAGGTGTGAGC 60.269 52.381 0.00 0.00 36.74 4.26
3775 3895 4.496895 GCTTGTATAGCTGCAAAATGTTCG 59.503 41.667 1.02 0.00 46.77 3.95
3795 3915 2.733227 CGGTGATTGCTTTTCTCCATGC 60.733 50.000 0.00 0.00 0.00 4.06
3867 4022 5.750067 CCAACAATTGGTTCTTGTCTCTTTG 59.250 40.000 10.83 0.39 45.93 2.77
3875 4031 0.529378 CTTGTCTCTTTGCATGGCCC 59.471 55.000 0.00 0.00 0.00 5.80
3895 4051 1.133790 CTTTTGCCTATGTGGAGCAGC 59.866 52.381 0.00 0.00 37.89 5.25
3912 4068 2.095718 GCAGCGAGACAAGTAAAAAGGG 60.096 50.000 0.00 0.00 0.00 3.95
3925 4081 2.575805 AAAAGGGAGGAAGTGAGCTG 57.424 50.000 0.00 0.00 0.00 4.24
3931 4087 1.277557 GGAGGAAGTGAGCTGTCATGT 59.722 52.381 0.00 0.00 34.36 3.21
3935 4091 3.834813 AGGAAGTGAGCTGTCATGTAAGA 59.165 43.478 0.00 0.00 34.36 2.10
3936 4092 4.284490 AGGAAGTGAGCTGTCATGTAAGAA 59.716 41.667 0.00 0.00 34.36 2.52
3941 4097 4.033817 GTGAGCTGTCATGTAAGAATCAGC 59.966 45.833 0.00 6.83 45.48 4.26
3954 4110 5.398603 AAGAATCAGCCTCTATATGTCCG 57.601 43.478 0.00 0.00 0.00 4.79
3961 4117 2.232452 GCCTCTATATGTCCGCTCATGT 59.768 50.000 0.00 0.00 0.00 3.21
3994 4150 4.214545 CCTCTACACGTGCTCCTAGATAAG 59.785 50.000 17.22 3.92 0.00 1.73
4024 4180 6.813649 AGGAGAAAAAGAGAAAGTGCAAAAAC 59.186 34.615 0.00 0.00 0.00 2.43
4048 4204 6.377712 ACTCACTAACTTAAGAGCGACCTTAT 59.622 38.462 10.09 0.00 0.00 1.73
4049 4205 6.561614 TCACTAACTTAAGAGCGACCTTATG 58.438 40.000 10.09 0.00 32.94 1.90
4072 4228 6.716284 TGACCAACCATATTGTATGAGTGAA 58.284 36.000 0.00 0.00 0.00 3.18
4219 4394 5.986004 AGAAAAGAGTTGGTTAACTGACG 57.014 39.130 5.42 0.00 46.79 4.35
4221 4396 4.411256 AAAGAGTTGGTTAACTGACGGA 57.589 40.909 5.42 0.00 46.79 4.69
4229 4404 3.118334 TGGTTAACTGACGGAAAACCAGA 60.118 43.478 16.38 1.75 43.44 3.86
4234 4409 2.206750 CTGACGGAAAACCAGACGAAA 58.793 47.619 0.00 0.00 0.00 3.46
4235 4410 2.610374 CTGACGGAAAACCAGACGAAAA 59.390 45.455 0.00 0.00 0.00 2.29
4237 4412 1.672363 ACGGAAAACCAGACGAAAACC 59.328 47.619 0.00 0.00 0.00 3.27
4260 4435 4.494690 CGTCATAATCTTGACCACACATGC 60.495 45.833 0.00 0.00 42.46 4.06
4273 4448 1.346395 ACACATGCGAACTACTCCCAA 59.654 47.619 0.00 0.00 0.00 4.12
4299 4474 1.062962 GGACCCACATGAATCCCCAAT 60.063 52.381 0.00 0.00 0.00 3.16
4307 4482 5.394443 CCACATGAATCCCCAATAAACACAG 60.394 44.000 0.00 0.00 0.00 3.66
4309 4484 5.779771 ACATGAATCCCCAATAAACACAGTT 59.220 36.000 0.00 0.00 0.00 3.16
4319 4494 7.255801 CCCCAATAAACACAGTTAACACAGAAT 60.256 37.037 8.61 0.00 0.00 2.40
4326 4501 4.150627 CACAGTTAACACAGAATCAGTCCG 59.849 45.833 8.61 0.00 0.00 4.79
4327 4502 4.038763 ACAGTTAACACAGAATCAGTCCGA 59.961 41.667 8.61 0.00 0.00 4.55
4335 4510 1.276421 AGAATCAGTCCGACACCCAAG 59.724 52.381 0.40 0.00 0.00 3.61
4338 4513 1.961277 CAGTCCGACACCCAAGCAC 60.961 63.158 0.40 0.00 0.00 4.40
4406 4581 6.525578 AAGGATATAACGACAGAGACAACA 57.474 37.500 0.00 0.00 0.00 3.33
4411 4586 2.493713 ACGACAGAGACAACAGACAC 57.506 50.000 0.00 0.00 0.00 3.67
4425 4600 1.188219 AGACACATCTGAGCCCACGT 61.188 55.000 0.00 0.00 32.29 4.49
4426 4601 0.737715 GACACATCTGAGCCCACGTC 60.738 60.000 0.00 0.00 0.00 4.34
4428 4603 0.817654 CACATCTGAGCCCACGTCTA 59.182 55.000 0.00 0.00 0.00 2.59
4441 4616 3.006110 CCCACGTCTACAACCTAGACAAA 59.994 47.826 7.97 0.00 42.94 2.83
4442 4617 4.322499 CCCACGTCTACAACCTAGACAAAT 60.322 45.833 7.97 0.00 42.94 2.32
4443 4618 4.625742 CCACGTCTACAACCTAGACAAATG 59.374 45.833 7.97 3.55 42.94 2.32
4444 4619 5.227908 CACGTCTACAACCTAGACAAATGT 58.772 41.667 7.97 0.00 42.94 2.71
4445 4620 6.384224 CACGTCTACAACCTAGACAAATGTA 58.616 40.000 7.97 0.00 42.94 2.29
4446 4621 7.033791 CACGTCTACAACCTAGACAAATGTAT 58.966 38.462 7.97 0.00 42.94 2.29
4447 4622 7.220300 CACGTCTACAACCTAGACAAATGTATC 59.780 40.741 7.97 0.00 42.94 2.24
4448 4623 7.094075 ACGTCTACAACCTAGACAAATGTATCA 60.094 37.037 7.97 0.00 42.94 2.15
4449 4624 7.921214 CGTCTACAACCTAGACAAATGTATCAT 59.079 37.037 7.97 0.00 42.94 2.45
4450 4625 9.035607 GTCTACAACCTAGACAAATGTATCATG 57.964 37.037 0.00 0.00 42.49 3.07
4451 4626 8.977412 TCTACAACCTAGACAAATGTATCATGA 58.023 33.333 0.00 0.00 0.00 3.07
4452 4627 9.599866 CTACAACCTAGACAAATGTATCATGAA 57.400 33.333 0.00 0.00 0.00 2.57
4453 4628 8.862325 ACAACCTAGACAAATGTATCATGAAA 57.138 30.769 0.00 0.00 0.00 2.69
4454 4629 9.295825 ACAACCTAGACAAATGTATCATGAAAA 57.704 29.630 0.00 0.00 0.00 2.29
4455 4630 9.559958 CAACCTAGACAAATGTATCATGAAAAC 57.440 33.333 0.00 1.73 0.00 2.43
4456 4631 8.862325 ACCTAGACAAATGTATCATGAAAACA 57.138 30.769 14.52 14.52 0.00 2.83
4457 4632 9.466497 ACCTAGACAAATGTATCATGAAAACAT 57.534 29.630 17.11 17.11 35.40 2.71
4458 4633 9.941664 CCTAGACAAATGTATCATGAAAACATC 57.058 33.333 21.01 13.01 32.80 3.06
4461 4636 7.972277 AGACAAATGTATCATGAAAACATCTGC 59.028 33.333 21.01 15.23 32.80 4.26
4462 4637 7.604549 ACAAATGTATCATGAAAACATCTGCA 58.395 30.769 21.01 5.69 32.80 4.41
4463 4638 7.543172 ACAAATGTATCATGAAAACATCTGCAC 59.457 33.333 21.01 1.43 32.80 4.57
4464 4639 5.565592 TGTATCATGAAAACATCTGCACC 57.434 39.130 0.00 0.00 0.00 5.01
4465 4640 5.255687 TGTATCATGAAAACATCTGCACCT 58.744 37.500 0.00 0.00 0.00 4.00
4466 4641 4.978083 ATCATGAAAACATCTGCACCTC 57.022 40.909 0.00 0.00 0.00 3.85
4467 4642 3.084039 TCATGAAAACATCTGCACCTCC 58.916 45.455 0.00 0.00 0.00 4.30
4468 4643 1.909700 TGAAAACATCTGCACCTCCC 58.090 50.000 0.00 0.00 0.00 4.30
4469 4644 1.177401 GAAAACATCTGCACCTCCCC 58.823 55.000 0.00 0.00 0.00 4.81
4470 4645 0.482446 AAAACATCTGCACCTCCCCA 59.518 50.000 0.00 0.00 0.00 4.96
4471 4646 0.706433 AAACATCTGCACCTCCCCAT 59.294 50.000 0.00 0.00 0.00 4.00
4472 4647 0.706433 AACATCTGCACCTCCCCATT 59.294 50.000 0.00 0.00 0.00 3.16
4473 4648 1.595311 ACATCTGCACCTCCCCATTA 58.405 50.000 0.00 0.00 0.00 1.90
4474 4649 2.138542 ACATCTGCACCTCCCCATTAT 58.861 47.619 0.00 0.00 0.00 1.28
4475 4650 2.107204 ACATCTGCACCTCCCCATTATC 59.893 50.000 0.00 0.00 0.00 1.75
4476 4651 2.196742 TCTGCACCTCCCCATTATCT 57.803 50.000 0.00 0.00 0.00 1.98
4477 4652 2.050144 TCTGCACCTCCCCATTATCTC 58.950 52.381 0.00 0.00 0.00 2.75
4478 4653 2.053244 CTGCACCTCCCCATTATCTCT 58.947 52.381 0.00 0.00 0.00 3.10
4479 4654 2.038295 CTGCACCTCCCCATTATCTCTC 59.962 54.545 0.00 0.00 0.00 3.20
4480 4655 2.334023 GCACCTCCCCATTATCTCTCT 58.666 52.381 0.00 0.00 0.00 3.10
4481 4656 2.708325 GCACCTCCCCATTATCTCTCTT 59.292 50.000 0.00 0.00 0.00 2.85
4482 4657 3.137360 GCACCTCCCCATTATCTCTCTTT 59.863 47.826 0.00 0.00 0.00 2.52
4483 4658 4.745172 GCACCTCCCCATTATCTCTCTTTC 60.745 50.000 0.00 0.00 0.00 2.62
4484 4659 3.977326 ACCTCCCCATTATCTCTCTTTCC 59.023 47.826 0.00 0.00 0.00 3.13
4485 4660 3.329225 CCTCCCCATTATCTCTCTTTCCC 59.671 52.174 0.00 0.00 0.00 3.97
4486 4661 4.238669 CTCCCCATTATCTCTCTTTCCCT 58.761 47.826 0.00 0.00 0.00 4.20
4487 4662 4.646157 TCCCCATTATCTCTCTTTCCCTT 58.354 43.478 0.00 0.00 0.00 3.95
4488 4663 4.413520 TCCCCATTATCTCTCTTTCCCTTG 59.586 45.833 0.00 0.00 0.00 3.61
4489 4664 4.140536 CCCATTATCTCTCTTTCCCTTGC 58.859 47.826 0.00 0.00 0.00 4.01
4490 4665 4.385643 CCCATTATCTCTCTTTCCCTTGCA 60.386 45.833 0.00 0.00 0.00 4.08
4491 4666 4.578105 CCATTATCTCTCTTTCCCTTGCAC 59.422 45.833 0.00 0.00 0.00 4.57
4492 4667 5.435291 CATTATCTCTCTTTCCCTTGCACT 58.565 41.667 0.00 0.00 0.00 4.40
4493 4668 5.505181 TTATCTCTCTTTCCCTTGCACTT 57.495 39.130 0.00 0.00 0.00 3.16
4494 4669 3.409026 TCTCTCTTTCCCTTGCACTTC 57.591 47.619 0.00 0.00 0.00 3.01
4495 4670 2.975489 TCTCTCTTTCCCTTGCACTTCT 59.025 45.455 0.00 0.00 0.00 2.85
4496 4671 4.160329 TCTCTCTTTCCCTTGCACTTCTA 58.840 43.478 0.00 0.00 0.00 2.10
4497 4672 4.221703 TCTCTCTTTCCCTTGCACTTCTAG 59.778 45.833 0.00 0.00 0.00 2.43
4498 4673 4.160329 TCTCTTTCCCTTGCACTTCTAGA 58.840 43.478 0.00 0.00 0.00 2.43
4499 4674 4.780021 TCTCTTTCCCTTGCACTTCTAGAT 59.220 41.667 0.00 0.00 0.00 1.98
4500 4675 5.249393 TCTCTTTCCCTTGCACTTCTAGATT 59.751 40.000 0.00 0.00 0.00 2.40
4501 4676 5.880901 TCTTTCCCTTGCACTTCTAGATTT 58.119 37.500 0.00 0.00 0.00 2.17
4502 4677 5.940470 TCTTTCCCTTGCACTTCTAGATTTC 59.060 40.000 0.00 0.00 0.00 2.17
4503 4678 5.505181 TTCCCTTGCACTTCTAGATTTCT 57.495 39.130 0.00 0.00 0.00 2.52
4504 4679 5.505181 TCCCTTGCACTTCTAGATTTCTT 57.495 39.130 0.00 0.00 0.00 2.52
4505 4680 5.491982 TCCCTTGCACTTCTAGATTTCTTC 58.508 41.667 0.00 0.00 0.00 2.87
4506 4681 4.637977 CCCTTGCACTTCTAGATTTCTTCC 59.362 45.833 0.00 0.00 0.00 3.46
4507 4682 4.637977 CCTTGCACTTCTAGATTTCTTCCC 59.362 45.833 0.00 0.00 0.00 3.97
4508 4683 3.861840 TGCACTTCTAGATTTCTTCCCG 58.138 45.455 0.00 0.00 0.00 5.14
4509 4684 3.260884 TGCACTTCTAGATTTCTTCCCGT 59.739 43.478 0.00 0.00 0.00 5.28
4510 4685 3.619038 GCACTTCTAGATTTCTTCCCGTG 59.381 47.826 0.00 0.00 0.00 4.94
4511 4686 4.184629 CACTTCTAGATTTCTTCCCGTGG 58.815 47.826 0.00 0.00 0.00 4.94
4512 4687 3.197983 ACTTCTAGATTTCTTCCCGTGGG 59.802 47.826 0.00 0.00 0.00 4.61
4513 4688 2.829023 TCTAGATTTCTTCCCGTGGGT 58.171 47.619 4.53 0.00 36.47 4.51
4514 4689 2.500098 TCTAGATTTCTTCCCGTGGGTG 59.500 50.000 4.53 0.00 36.47 4.61
4515 4690 0.322546 AGATTTCTTCCCGTGGGTGC 60.323 55.000 4.53 0.00 36.47 5.01
4516 4691 1.304134 ATTTCTTCCCGTGGGTGCC 60.304 57.895 4.53 0.00 36.47 5.01
4517 4692 2.075355 ATTTCTTCCCGTGGGTGCCA 62.075 55.000 4.53 0.00 36.47 4.92
4518 4693 2.690653 TTTCTTCCCGTGGGTGCCAG 62.691 60.000 4.53 0.00 32.34 4.85
4519 4694 4.722700 CTTCCCGTGGGTGCCAGG 62.723 72.222 4.53 0.00 38.91 4.45
4523 4698 4.263572 CCGTGGGTGCCAGGTTGA 62.264 66.667 0.00 0.00 37.67 3.18
4524 4699 2.669569 CGTGGGTGCCAGGTTGAG 60.670 66.667 0.00 0.00 35.03 3.02
4525 4700 2.282462 GTGGGTGCCAGGTTGAGG 60.282 66.667 0.00 0.00 32.34 3.86
4526 4701 3.579302 TGGGTGCCAGGTTGAGGG 61.579 66.667 0.00 0.00 0.00 4.30
4527 4702 3.580319 GGGTGCCAGGTTGAGGGT 61.580 66.667 0.00 0.00 0.00 4.34
4528 4703 2.282462 GGTGCCAGGTTGAGGGTG 60.282 66.667 0.00 0.00 0.00 4.61
4529 4704 2.829384 GGTGCCAGGTTGAGGGTGA 61.829 63.158 0.00 0.00 0.00 4.02
4530 4705 1.302832 GTGCCAGGTTGAGGGTGAG 60.303 63.158 0.00 0.00 0.00 3.51
4531 4706 2.360475 GCCAGGTTGAGGGTGAGC 60.360 66.667 0.00 0.00 0.00 4.26
4532 4707 2.900106 GCCAGGTTGAGGGTGAGCT 61.900 63.158 0.00 0.00 0.00 4.09
4533 4708 1.763770 CCAGGTTGAGGGTGAGCTT 59.236 57.895 0.00 0.00 0.00 3.74
4534 4709 0.322008 CCAGGTTGAGGGTGAGCTTC 60.322 60.000 0.00 0.00 0.00 3.86
4535 4710 0.397941 CAGGTTGAGGGTGAGCTTCA 59.602 55.000 0.00 0.00 0.00 3.02
4536 4711 1.004044 CAGGTTGAGGGTGAGCTTCAT 59.996 52.381 0.00 0.00 0.00 2.57
4537 4712 1.280421 AGGTTGAGGGTGAGCTTCATC 59.720 52.381 0.00 0.00 0.00 2.92
4543 4718 2.797177 GGGTGAGCTTCATCCTTCTT 57.203 50.000 7.88 0.00 44.28 2.52
4544 4719 2.363683 GGGTGAGCTTCATCCTTCTTG 58.636 52.381 7.88 0.00 44.28 3.02
4545 4720 1.742268 GGTGAGCTTCATCCTTCTTGC 59.258 52.381 0.00 0.00 0.00 4.01
4546 4721 2.430465 GTGAGCTTCATCCTTCTTGCA 58.570 47.619 0.00 0.00 0.00 4.08
4547 4722 3.015327 GTGAGCTTCATCCTTCTTGCAT 58.985 45.455 0.00 0.00 0.00 3.96
4548 4723 3.442977 GTGAGCTTCATCCTTCTTGCATT 59.557 43.478 0.00 0.00 0.00 3.56
4549 4724 4.082354 GTGAGCTTCATCCTTCTTGCATTT 60.082 41.667 0.00 0.00 0.00 2.32
4550 4725 4.082408 TGAGCTTCATCCTTCTTGCATTTG 60.082 41.667 0.00 0.00 0.00 2.32
4551 4726 3.830755 AGCTTCATCCTTCTTGCATTTGT 59.169 39.130 0.00 0.00 0.00 2.83
4552 4727 3.924686 GCTTCATCCTTCTTGCATTTGTG 59.075 43.478 0.00 0.00 0.00 3.33
4553 4728 3.581024 TCATCCTTCTTGCATTTGTGC 57.419 42.857 0.00 0.00 0.00 4.57
4554 4729 2.231964 TCATCCTTCTTGCATTTGTGCC 59.768 45.455 0.00 0.00 0.00 5.01
4555 4730 1.999648 TCCTTCTTGCATTTGTGCCT 58.000 45.000 0.00 0.00 0.00 4.75
4556 4731 2.318908 TCCTTCTTGCATTTGTGCCTT 58.681 42.857 0.00 0.00 0.00 4.35
4557 4732 2.036217 TCCTTCTTGCATTTGTGCCTTG 59.964 45.455 0.00 0.00 0.00 3.61
4558 4733 2.036217 CCTTCTTGCATTTGTGCCTTGA 59.964 45.455 0.00 0.00 0.00 3.02
4559 4734 3.306502 CCTTCTTGCATTTGTGCCTTGAT 60.307 43.478 0.00 0.00 0.00 2.57
4560 4735 3.306917 TCTTGCATTTGTGCCTTGATG 57.693 42.857 0.00 0.00 0.00 3.07
4561 4736 1.730064 CTTGCATTTGTGCCTTGATGC 59.270 47.619 0.00 0.00 43.83 3.91
4562 4737 3.518381 GCATTTGTGCCTTGATGCA 57.482 47.368 0.00 0.00 43.23 3.96
4563 4738 1.276705 TGCATTTGTGCCTTGATGCAT 59.723 42.857 0.00 0.00 46.94 3.96
4564 4739 1.663643 GCATTTGTGCCTTGATGCATG 59.336 47.619 2.46 0.00 44.30 4.06
4565 4740 1.663643 CATTTGTGCCTTGATGCATGC 59.336 47.619 11.82 11.82 44.30 4.06
4566 4741 0.037139 TTTGTGCCTTGATGCATGCC 60.037 50.000 16.68 0.28 44.30 4.40
4567 4742 0.901114 TTGTGCCTTGATGCATGCCT 60.901 50.000 16.68 4.84 44.30 4.75
4568 4743 0.901114 TGTGCCTTGATGCATGCCTT 60.901 50.000 16.68 1.92 44.30 4.35
4569 4744 1.105457 GTGCCTTGATGCATGCCTTA 58.895 50.000 16.68 0.00 44.30 2.69
4570 4745 1.684983 GTGCCTTGATGCATGCCTTAT 59.315 47.619 16.68 1.15 44.30 1.73
4571 4746 1.684450 TGCCTTGATGCATGCCTTATG 59.316 47.619 16.68 4.48 36.04 1.90
4582 4757 4.548991 CATGCCTTATGCTTCAAGAGAC 57.451 45.455 0.00 0.00 42.00 3.36
4583 4758 3.701205 TGCCTTATGCTTCAAGAGACA 57.299 42.857 0.00 0.00 42.00 3.41
4584 4759 4.226427 TGCCTTATGCTTCAAGAGACAT 57.774 40.909 0.00 0.00 42.00 3.06
4585 4760 4.592942 TGCCTTATGCTTCAAGAGACATT 58.407 39.130 0.00 0.00 42.00 2.71
4586 4761 4.397103 TGCCTTATGCTTCAAGAGACATTG 59.603 41.667 0.00 0.00 42.00 2.82
4587 4762 4.637534 GCCTTATGCTTCAAGAGACATTGA 59.362 41.667 0.00 0.00 37.41 2.57
4588 4763 5.124457 GCCTTATGCTTCAAGAGACATTGAA 59.876 40.000 0.00 2.29 44.72 2.69
4589 4764 6.183360 GCCTTATGCTTCAAGAGACATTGAAT 60.183 38.462 2.64 0.00 45.50 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
150 151 6.881065 TCTTTCTCCTGAATTTCATGTTCGAT 59.119 34.615 0.00 0.00 31.56 3.59
186 187 9.130312 GTCTCCTGAGTAATTATAACAATAGCG 57.870 37.037 0.00 0.00 0.00 4.26
190 191 7.934120 GGCAGTCTCCTGAGTAATTATAACAAT 59.066 37.037 0.00 0.00 41.50 2.71
191 192 7.093068 TGGCAGTCTCCTGAGTAATTATAACAA 60.093 37.037 0.00 0.00 41.50 2.83
194 195 7.290014 TGATGGCAGTCTCCTGAGTAATTATAA 59.710 37.037 0.00 0.00 41.50 0.98
196 197 5.604231 TGATGGCAGTCTCCTGAGTAATTAT 59.396 40.000 0.00 0.00 41.50 1.28
197 198 4.962362 TGATGGCAGTCTCCTGAGTAATTA 59.038 41.667 0.00 0.00 41.50 1.40
198 199 3.776969 TGATGGCAGTCTCCTGAGTAATT 59.223 43.478 0.00 0.00 41.50 1.40
199 200 3.378512 TGATGGCAGTCTCCTGAGTAAT 58.621 45.455 0.00 0.00 41.50 1.89
201 202 2.532250 TGATGGCAGTCTCCTGAGTA 57.468 50.000 0.00 0.00 41.50 2.59
203 204 1.134461 CCTTGATGGCAGTCTCCTGAG 60.134 57.143 0.00 0.00 41.50 3.35
204 205 0.907486 CCTTGATGGCAGTCTCCTGA 59.093 55.000 0.00 0.00 41.50 3.86
325 332 1.937223 GTGTTCGTTCACACCATCACA 59.063 47.619 7.58 0.00 41.18 3.58
369 376 2.555325 ACATTCCATGACACAAGCACAG 59.445 45.455 0.00 0.00 0.00 3.66
402 409 5.069914 TCAGCTAACTCAACCACTTTACTCA 59.930 40.000 0.00 0.00 0.00 3.41
467 474 1.202687 ACACACACACACATCCTCCAG 60.203 52.381 0.00 0.00 0.00 3.86
490 511 3.064271 TCTGCGTACAAAACTGTGAAACC 59.936 43.478 0.00 0.00 34.36 3.27
530 551 2.654912 CGCTCGACACCAAACGTCC 61.655 63.158 0.00 0.00 0.00 4.79
532 553 2.660552 CCGCTCGACACCAAACGT 60.661 61.111 0.00 0.00 0.00 3.99
546 567 1.684983 TCCACATAGTAGGTAAGCCGC 59.315 52.381 0.00 0.00 40.50 6.53
549 570 5.134661 ACTCTCTCCACATAGTAGGTAAGC 58.865 45.833 0.00 0.00 0.00 3.09
550 571 7.648039 AAACTCTCTCCACATAGTAGGTAAG 57.352 40.000 0.00 0.00 0.00 2.34
551 572 7.453752 ACAAAACTCTCTCCACATAGTAGGTAA 59.546 37.037 0.00 0.00 0.00 2.85
555 584 7.760340 GGTAACAAAACTCTCTCCACATAGTAG 59.240 40.741 0.00 0.00 0.00 2.57
582 611 7.665559 ACAAAAGATACAGCCTACAAAGATCAA 59.334 33.333 0.00 0.00 0.00 2.57
584 613 7.617041 ACAAAAGATACAGCCTACAAAGATC 57.383 36.000 0.00 0.00 0.00 2.75
585 614 9.686683 ATTACAAAAGATACAGCCTACAAAGAT 57.313 29.630 0.00 0.00 0.00 2.40
587 616 8.946085 TCATTACAAAAGATACAGCCTACAAAG 58.054 33.333 0.00 0.00 0.00 2.77
588 617 8.856153 TCATTACAAAAGATACAGCCTACAAA 57.144 30.769 0.00 0.00 0.00 2.83
605 635 7.041098 GGAGCAACTTCTTTTCTCTCATTACAA 60.041 37.037 0.00 0.00 0.00 2.41
637 667 5.012893 CCTTTTTCTGATGGAGTAAGCCTT 58.987 41.667 0.00 0.00 0.00 4.35
638 668 4.568592 CCCTTTTTCTGATGGAGTAAGCCT 60.569 45.833 0.00 0.00 0.00 4.58
651 682 4.861102 AATCTTGTGCTCCCTTTTTCTG 57.139 40.909 0.00 0.00 0.00 3.02
682 713 8.601845 ACTTGATGGGTTACAAAAATTTAAGC 57.398 30.769 0.00 0.00 0.00 3.09
685 716 9.646427 GCATACTTGATGGGTTACAAAAATTTA 57.354 29.630 0.00 0.00 35.91 1.40
740 771 6.823182 CACCAACATTCTTTTCTTCCCTTTTT 59.177 34.615 0.00 0.00 0.00 1.94
741 772 6.070251 ACACCAACATTCTTTTCTTCCCTTTT 60.070 34.615 0.00 0.00 0.00 2.27
742 773 5.425217 ACACCAACATTCTTTTCTTCCCTTT 59.575 36.000 0.00 0.00 0.00 3.11
743 774 4.962362 ACACCAACATTCTTTTCTTCCCTT 59.038 37.500 0.00 0.00 0.00 3.95
744 775 4.546674 ACACCAACATTCTTTTCTTCCCT 58.453 39.130 0.00 0.00 0.00 4.20
745 776 4.937201 ACACCAACATTCTTTTCTTCCC 57.063 40.909 0.00 0.00 0.00 3.97
758 789 0.455410 GCAGCTGTTCAACACCAACA 59.545 50.000 16.64 0.00 32.75 3.33
789 820 1.303074 AGGCCAGCACACATCACAG 60.303 57.895 5.01 0.00 0.00 3.66
790 821 1.601477 CAGGCCAGCACACATCACA 60.601 57.895 5.01 0.00 0.00 3.58
866 897 1.226974 CGTATGTGGCCAGGAGTCG 60.227 63.158 5.11 4.10 0.00 4.18
884 915 0.385974 GTGTTGTGTTCGATGCAGGC 60.386 55.000 0.00 0.00 0.00 4.85
893 924 4.351131 AAGACTTTTCGGTGTTGTGTTC 57.649 40.909 0.00 0.00 0.00 3.18
939 977 4.400961 AGACGGAAGCAGCAGGGC 62.401 66.667 0.00 0.00 0.00 5.19
1127 1165 1.730902 CGGCATCGGCATCGTAGAG 60.731 63.158 0.00 0.00 43.71 2.43
1224 1262 0.804544 CCAATGCCATGAAAGCAGCG 60.805 55.000 0.00 0.00 44.90 5.18
1225 1263 1.087771 GCCAATGCCATGAAAGCAGC 61.088 55.000 0.00 0.00 44.90 5.25
1226 1264 0.535335 AGCCAATGCCATGAAAGCAG 59.465 50.000 0.00 0.00 44.90 4.24
1338 1376 4.362932 TCTATCAAGAGAACGAGCACTG 57.637 45.455 0.00 0.00 0.00 3.66
1386 1436 8.030106 GCAGAGGATAAGAATATACTGTGTACC 58.970 40.741 6.97 0.00 42.87 3.34
1390 1440 7.665690 AGTGCAGAGGATAAGAATATACTGTG 58.334 38.462 0.00 1.83 43.47 3.66
1392 1442 7.026562 CGAGTGCAGAGGATAAGAATATACTG 58.973 42.308 0.00 0.00 32.53 2.74
1416 1472 9.135843 CCAACAACCTATACATACATACATACG 57.864 37.037 0.00 0.00 0.00 3.06
1767 1823 0.034283 TGAGTGGCAATGGCATGCTA 60.034 50.000 18.92 12.99 45.68 3.49
1768 1824 1.304630 TGAGTGGCAATGGCATGCT 60.305 52.632 18.92 6.17 45.68 3.79
1807 1869 1.007271 CGACAGCGTCAGTGAAGGT 60.007 57.895 4.86 4.86 32.09 3.50
1808 1870 3.848142 CGACAGCGTCAGTGAAGG 58.152 61.111 8.19 0.00 32.09 3.46
1968 2036 2.049433 CTCCAACGTCGCGAAGGT 60.049 61.111 25.31 17.54 0.00 3.50
2231 2306 8.511321 CAAATGCAAATGAAGTGGTAGTAGTAA 58.489 33.333 0.00 0.00 0.00 2.24
2241 2316 3.430895 GTCAGGCAAATGCAAATGAAGTG 59.569 43.478 7.80 0.83 44.36 3.16
2301 2377 6.127730 GGGTGTAACAATTTCTTGATACCAGG 60.128 42.308 0.00 0.00 38.93 4.45
2427 2503 9.031360 CAGATAAATTCAGAATTTGATTGCAGG 57.969 33.333 25.51 7.92 41.01 4.85
2484 2560 5.579047 AGAGCAGAGCAGAGTATATATGGT 58.421 41.667 0.00 0.00 32.46 3.55
2516 2592 2.761208 CACCTACAAAACCAACCAACCA 59.239 45.455 0.00 0.00 0.00 3.67
2517 2593 3.025262 TCACCTACAAAACCAACCAACC 58.975 45.455 0.00 0.00 0.00 3.77
2518 2594 4.929819 ATCACCTACAAAACCAACCAAC 57.070 40.909 0.00 0.00 0.00 3.77
2519 2595 5.302313 GGTAATCACCTACAAAACCAACCAA 59.698 40.000 0.00 0.00 42.11 3.67
2590 2666 6.409704 TGATAAGATGACAGACCCAAGAAAG 58.590 40.000 0.00 0.00 0.00 2.62
2649 2725 6.862209 TGCAAGATAACAATGGGAATTACAC 58.138 36.000 0.00 0.00 0.00 2.90
2681 2773 5.273208 AGATGAGTTCTAGCTACTCCCAAA 58.727 41.667 17.14 4.58 41.02 3.28
2699 2791 7.285629 AGACCAAATTACGTCTCATCTAGATGA 59.714 37.037 29.17 29.17 42.99 2.92
2700 2792 7.429633 AGACCAAATTACGTCTCATCTAGATG 58.570 38.462 24.32 24.32 45.40 2.90
2701 2793 7.589958 AGACCAAATTACGTCTCATCTAGAT 57.410 36.000 0.00 0.00 34.15 1.98
2710 2802 6.536582 CAGATGAATGAGACCAAATTACGTCT 59.463 38.462 6.98 6.98 42.02 4.18
2711 2803 6.535150 TCAGATGAATGAGACCAAATTACGTC 59.465 38.462 0.00 0.00 0.00 4.34
2712 2804 6.406370 TCAGATGAATGAGACCAAATTACGT 58.594 36.000 0.00 0.00 0.00 3.57
2713 2805 6.908870 TCAGATGAATGAGACCAAATTACG 57.091 37.500 0.00 0.00 0.00 3.18
2714 2806 9.912634 TTTTTCAGATGAATGAGACCAAATTAC 57.087 29.630 0.00 0.00 33.54 1.89
2715 2807 9.912634 GTTTTTCAGATGAATGAGACCAAATTA 57.087 29.630 0.00 0.00 33.54 1.40
2716 2808 8.423349 TGTTTTTCAGATGAATGAGACCAAATT 58.577 29.630 0.00 0.00 33.54 1.82
2717 2809 7.954835 TGTTTTTCAGATGAATGAGACCAAAT 58.045 30.769 0.00 0.00 33.54 2.32
2718 2810 7.345422 TGTTTTTCAGATGAATGAGACCAAA 57.655 32.000 0.00 0.00 33.54 3.28
2719 2811 6.957920 TGTTTTTCAGATGAATGAGACCAA 57.042 33.333 0.00 0.00 33.54 3.67
2720 2812 6.772233 TCTTGTTTTTCAGATGAATGAGACCA 59.228 34.615 0.00 0.00 33.54 4.02
2721 2813 7.206981 TCTTGTTTTTCAGATGAATGAGACC 57.793 36.000 0.00 0.00 33.54 3.85
2722 2814 7.322222 CGTTCTTGTTTTTCAGATGAATGAGAC 59.678 37.037 0.00 0.00 33.54 3.36
2723 2815 7.355017 CGTTCTTGTTTTTCAGATGAATGAGA 58.645 34.615 0.00 0.00 33.54 3.27
2724 2816 6.580041 CCGTTCTTGTTTTTCAGATGAATGAG 59.420 38.462 0.00 0.00 33.54 2.90
2725 2817 6.262049 TCCGTTCTTGTTTTTCAGATGAATGA 59.738 34.615 0.00 0.00 33.54 2.57
2726 2818 6.437928 TCCGTTCTTGTTTTTCAGATGAATG 58.562 36.000 0.00 0.00 33.54 2.67
2727 2819 6.633500 TCCGTTCTTGTTTTTCAGATGAAT 57.367 33.333 0.00 0.00 33.54 2.57
2728 2820 6.633500 ATCCGTTCTTGTTTTTCAGATGAA 57.367 33.333 0.00 0.00 0.00 2.57
2729 2821 7.921786 ATATCCGTTCTTGTTTTTCAGATGA 57.078 32.000 0.00 0.00 0.00 2.92
2730 2822 9.490663 GTTATATCCGTTCTTGTTTTTCAGATG 57.509 33.333 0.00 0.00 0.00 2.90
2731 2823 8.674607 GGTTATATCCGTTCTTGTTTTTCAGAT 58.325 33.333 0.00 0.00 0.00 2.90
2732 2824 7.120138 GGGTTATATCCGTTCTTGTTTTTCAGA 59.880 37.037 0.00 0.00 0.00 3.27
2733 2825 7.094549 TGGGTTATATCCGTTCTTGTTTTTCAG 60.095 37.037 0.00 0.00 0.00 3.02
2734 2826 6.715718 TGGGTTATATCCGTTCTTGTTTTTCA 59.284 34.615 0.00 0.00 0.00 2.69
2735 2827 7.025365 GTGGGTTATATCCGTTCTTGTTTTTC 58.975 38.462 0.00 0.00 0.00 2.29
2736 2828 6.348704 CGTGGGTTATATCCGTTCTTGTTTTT 60.349 38.462 0.00 0.00 0.00 1.94
2737 2829 5.122711 CGTGGGTTATATCCGTTCTTGTTTT 59.877 40.000 0.00 0.00 0.00 2.43
2738 2830 4.632688 CGTGGGTTATATCCGTTCTTGTTT 59.367 41.667 0.00 0.00 0.00 2.83
2739 2831 4.186159 CGTGGGTTATATCCGTTCTTGTT 58.814 43.478 0.00 0.00 0.00 2.83
2740 2832 3.196254 ACGTGGGTTATATCCGTTCTTGT 59.804 43.478 0.00 0.00 0.00 3.16
2741 2833 3.788937 ACGTGGGTTATATCCGTTCTTG 58.211 45.455 0.00 0.00 0.00 3.02
2742 2834 3.448301 TGACGTGGGTTATATCCGTTCTT 59.552 43.478 0.00 0.00 0.00 2.52
2743 2835 3.025978 TGACGTGGGTTATATCCGTTCT 58.974 45.455 0.00 0.00 0.00 3.01
2744 2836 3.378339 CTGACGTGGGTTATATCCGTTC 58.622 50.000 0.00 0.00 0.00 3.95
2745 2837 2.482490 GCTGACGTGGGTTATATCCGTT 60.482 50.000 0.00 0.00 0.00 4.44
2746 2838 1.068127 GCTGACGTGGGTTATATCCGT 59.932 52.381 0.00 0.00 0.00 4.69
2747 2839 1.067974 TGCTGACGTGGGTTATATCCG 59.932 52.381 0.00 0.00 0.00 4.18
2748 2840 2.159014 TGTGCTGACGTGGGTTATATCC 60.159 50.000 0.00 0.00 0.00 2.59
2749 2841 2.864343 GTGTGCTGACGTGGGTTATATC 59.136 50.000 0.00 0.00 0.00 1.63
2750 2842 2.235155 TGTGTGCTGACGTGGGTTATAT 59.765 45.455 0.00 0.00 0.00 0.86
2751 2843 1.619332 TGTGTGCTGACGTGGGTTATA 59.381 47.619 0.00 0.00 0.00 0.98
2752 2844 0.394938 TGTGTGCTGACGTGGGTTAT 59.605 50.000 0.00 0.00 0.00 1.89
2753 2845 0.531090 GTGTGTGCTGACGTGGGTTA 60.531 55.000 0.00 0.00 0.00 2.85
2754 2846 1.817941 GTGTGTGCTGACGTGGGTT 60.818 57.895 0.00 0.00 0.00 4.11
2755 2847 2.203015 GTGTGTGCTGACGTGGGT 60.203 61.111 0.00 0.00 0.00 4.51
2756 2848 3.337889 CGTGTGTGCTGACGTGGG 61.338 66.667 0.00 0.00 0.00 4.61
2757 2849 4.000557 GCGTGTGTGCTGACGTGG 62.001 66.667 0.00 0.00 37.89 4.94
2758 2850 2.484631 GATGCGTGTGTGCTGACGTG 62.485 60.000 0.00 0.00 37.89 4.49
2759 2851 2.280119 ATGCGTGTGTGCTGACGT 60.280 55.556 0.00 0.00 37.89 4.34
2760 2852 1.560004 AAGATGCGTGTGTGCTGACG 61.560 55.000 0.00 0.00 38.63 4.35
2761 2853 1.428448 TAAGATGCGTGTGTGCTGAC 58.572 50.000 0.00 0.00 35.36 3.51
2762 2854 2.385013 ATAAGATGCGTGTGTGCTGA 57.615 45.000 0.00 0.00 35.36 4.26
2763 2855 2.033407 GCTATAAGATGCGTGTGTGCTG 60.033 50.000 0.00 0.00 35.36 4.41
2764 2856 2.205074 GCTATAAGATGCGTGTGTGCT 58.795 47.619 0.00 0.00 35.36 4.40
2765 2857 1.933181 TGCTATAAGATGCGTGTGTGC 59.067 47.619 0.00 0.00 0.00 4.57
2766 2858 3.803778 TGATGCTATAAGATGCGTGTGTG 59.196 43.478 0.00 0.00 0.00 3.82
2767 2859 3.804325 GTGATGCTATAAGATGCGTGTGT 59.196 43.478 0.00 0.00 0.00 3.72
2768 2860 3.803778 TGTGATGCTATAAGATGCGTGTG 59.196 43.478 0.00 0.00 0.00 3.82
2769 2861 4.058721 TGTGATGCTATAAGATGCGTGT 57.941 40.909 0.00 0.00 0.00 4.49
2770 2862 4.092529 GGATGTGATGCTATAAGATGCGTG 59.907 45.833 0.00 0.00 0.00 5.34
2771 2863 4.248859 GGATGTGATGCTATAAGATGCGT 58.751 43.478 0.00 0.00 0.00 5.24
2772 2864 4.248058 TGGATGTGATGCTATAAGATGCG 58.752 43.478 0.00 0.00 0.00 4.73
2773 2865 6.404403 CCATTGGATGTGATGCTATAAGATGC 60.404 42.308 0.00 0.00 0.00 3.91
2774 2866 6.404403 GCCATTGGATGTGATGCTATAAGATG 60.404 42.308 6.95 0.00 0.00 2.90
2775 2867 5.651139 GCCATTGGATGTGATGCTATAAGAT 59.349 40.000 6.95 0.00 0.00 2.40
2776 2868 5.005740 GCCATTGGATGTGATGCTATAAGA 58.994 41.667 6.95 0.00 0.00 2.10
2777 2869 5.008331 AGCCATTGGATGTGATGCTATAAG 58.992 41.667 6.95 0.00 0.00 1.73
2778 2870 4.989277 AGCCATTGGATGTGATGCTATAA 58.011 39.130 6.95 0.00 0.00 0.98
2779 2871 4.645863 AGCCATTGGATGTGATGCTATA 57.354 40.909 6.95 0.00 0.00 1.31
2780 2872 3.520691 AGCCATTGGATGTGATGCTAT 57.479 42.857 6.95 0.00 0.00 2.97
2781 2873 4.645863 ATAGCCATTGGATGTGATGCTA 57.354 40.909 6.95 0.00 0.00 3.49
2782 2874 3.520691 ATAGCCATTGGATGTGATGCT 57.479 42.857 6.95 0.00 0.00 3.79
2783 2875 5.710513 TTTATAGCCATTGGATGTGATGC 57.289 39.130 6.95 0.00 0.00 3.91
2784 2876 6.266103 ACCTTTTATAGCCATTGGATGTGATG 59.734 38.462 6.95 0.00 0.00 3.07
2785 2877 6.266103 CACCTTTTATAGCCATTGGATGTGAT 59.734 38.462 6.95 0.00 0.00 3.06
2786 2878 5.593909 CACCTTTTATAGCCATTGGATGTGA 59.406 40.000 6.95 0.00 0.00 3.58
2787 2879 5.593909 TCACCTTTTATAGCCATTGGATGTG 59.406 40.000 6.95 2.95 0.00 3.21
2788 2880 5.765510 TCACCTTTTATAGCCATTGGATGT 58.234 37.500 6.95 0.10 0.00 3.06
2789 2881 6.713762 TTCACCTTTTATAGCCATTGGATG 57.286 37.500 6.95 0.00 0.00 3.51
2790 2882 7.068702 TCATTCACCTTTTATAGCCATTGGAT 58.931 34.615 6.95 1.78 0.00 3.41
2791 2883 6.430864 TCATTCACCTTTTATAGCCATTGGA 58.569 36.000 6.95 0.00 0.00 3.53
2792 2884 6.547141 TCTCATTCACCTTTTATAGCCATTGG 59.453 38.462 0.00 0.00 0.00 3.16
2793 2885 7.420800 GTCTCATTCACCTTTTATAGCCATTG 58.579 38.462 0.00 0.00 0.00 2.82
2794 2886 6.547510 GGTCTCATTCACCTTTTATAGCCATT 59.452 38.462 0.00 0.00 0.00 3.16
2795 2887 6.064717 GGTCTCATTCACCTTTTATAGCCAT 58.935 40.000 0.00 0.00 0.00 4.40
2796 2888 5.045213 TGGTCTCATTCACCTTTTATAGCCA 60.045 40.000 0.00 0.00 34.66 4.75
2797 2889 5.437060 TGGTCTCATTCACCTTTTATAGCC 58.563 41.667 0.00 0.00 34.66 3.93
2798 2890 7.121315 AGTTTGGTCTCATTCACCTTTTATAGC 59.879 37.037 0.00 0.00 34.66 2.97
2799 2891 8.567285 AGTTTGGTCTCATTCACCTTTTATAG 57.433 34.615 0.00 0.00 34.66 1.31
2801 2893 8.934023 TTAGTTTGGTCTCATTCACCTTTTAT 57.066 30.769 0.00 0.00 34.66 1.40
2802 2894 8.754991 TTTAGTTTGGTCTCATTCACCTTTTA 57.245 30.769 0.00 0.00 34.66 1.52
2803 2895 7.654022 TTTAGTTTGGTCTCATTCACCTTTT 57.346 32.000 0.00 0.00 34.66 2.27
2804 2896 7.725844 AGATTTAGTTTGGTCTCATTCACCTTT 59.274 33.333 0.00 0.00 34.66 3.11
2805 2897 7.234355 AGATTTAGTTTGGTCTCATTCACCTT 58.766 34.615 0.00 0.00 34.66 3.50
2806 2898 6.784031 AGATTTAGTTTGGTCTCATTCACCT 58.216 36.000 0.00 0.00 34.66 4.00
2807 2899 6.655003 TGAGATTTAGTTTGGTCTCATTCACC 59.345 38.462 0.16 0.00 41.40 4.02
2808 2900 7.672983 TGAGATTTAGTTTGGTCTCATTCAC 57.327 36.000 0.16 0.00 41.40 3.18
2814 2906 9.474920 CATCTAGATGAGATTTAGTTTGGTCTC 57.525 37.037 25.78 0.00 42.70 3.36
2815 2907 9.206690 TCATCTAGATGAGATTTAGTTTGGTCT 57.793 33.333 27.93 0.00 42.70 3.85
2892 2984 2.221055 CAGAGCAACCGTAACAGTGTTC 59.779 50.000 12.82 3.70 0.00 3.18
3020 3116 1.068250 GCGTCCTAGGATGGCTGTC 59.932 63.158 28.51 10.82 0.00 3.51
3048 3144 2.170166 GATGGTCAATGTTGGCTCCAA 58.830 47.619 0.00 0.00 32.28 3.53
3140 3236 1.928868 AGAGAATGCAAGGGGGTTTG 58.071 50.000 0.00 0.00 0.00 2.93
3144 3240 1.005215 ACAGAAGAGAATGCAAGGGGG 59.995 52.381 0.00 0.00 0.00 5.40
3170 3266 9.913310 TTATATCACCACATTCCAAATTCAGTA 57.087 29.630 0.00 0.00 0.00 2.74
3256 3353 2.935955 GTCAGAACAACCACGGCG 59.064 61.111 4.80 4.80 0.00 6.46
3283 3380 2.625973 CTTGCACAAAGTTGGCGCCA 62.626 55.000 29.03 29.03 31.95 5.69
3404 3501 6.814644 CCATCAAATTTAGCATGCTTTCAGAA 59.185 34.615 28.02 10.94 0.00 3.02
3414 3511 3.118665 GCACCCACCATCAAATTTAGCAT 60.119 43.478 0.00 0.00 0.00 3.79
3618 3723 3.360249 AAACTCATCACAAGCTGTTGC 57.640 42.857 0.00 0.00 37.14 4.17
3684 3790 4.023726 ACATGCCAAGGAAATTTTGCAT 57.976 36.364 3.39 1.32 0.00 3.96
3697 3803 3.979911 ACCATCCATCTTTACATGCCAA 58.020 40.909 0.00 0.00 0.00 4.52
3698 3804 3.668141 ACCATCCATCTTTACATGCCA 57.332 42.857 0.00 0.00 0.00 4.92
3699 3805 3.491447 GCAACCATCCATCTTTACATGCC 60.491 47.826 0.00 0.00 0.00 4.40
3700 3806 3.130869 TGCAACCATCCATCTTTACATGC 59.869 43.478 0.00 0.00 0.00 4.06
3775 3895 2.733227 CGCATGGAGAAAAGCAATCACC 60.733 50.000 0.00 0.00 0.00 4.02
3795 3915 8.560374 ACTCTTGTTCCTTTAGAAGAAAAATCG 58.440 33.333 0.00 0.00 37.30 3.34
3827 3947 2.079170 TTGGCACCAAACCAATCAGA 57.921 45.000 0.00 0.00 42.23 3.27
3860 4015 1.619827 CAAAAGGGCCATGCAAAGAGA 59.380 47.619 6.18 0.00 0.00 3.10
3875 4031 1.133790 GCTGCTCCACATAGGCAAAAG 59.866 52.381 0.00 0.00 37.29 2.27
3895 4051 4.267349 TCCTCCCTTTTTACTTGTCTCG 57.733 45.455 0.00 0.00 0.00 4.04
3912 4068 2.758736 ACATGACAGCTCACTTCCTC 57.241 50.000 0.00 0.00 0.00 3.71
3925 4081 8.310382 ACATATAGAGGCTGATTCTTACATGAC 58.690 37.037 0.00 0.00 0.00 3.06
3931 4087 5.105716 GCGGACATATAGAGGCTGATTCTTA 60.106 44.000 0.00 0.00 0.00 2.10
3935 4091 3.169099 AGCGGACATATAGAGGCTGATT 58.831 45.455 0.00 0.00 0.00 2.57
3936 4092 2.757868 GAGCGGACATATAGAGGCTGAT 59.242 50.000 0.00 0.00 0.00 2.90
3941 4097 5.416013 TCTTACATGAGCGGACATATAGAGG 59.584 44.000 0.00 0.00 0.00 3.69
3954 4110 2.820330 GAGGCTGACTCTTACATGAGC 58.180 52.381 2.46 0.00 43.14 4.26
3994 4150 5.049060 GCACTTTCTCTTTTTCTCCTTCCTC 60.049 44.000 0.00 0.00 0.00 3.71
4024 4180 4.705337 AGGTCGCTCTTAAGTTAGTGAG 57.295 45.455 7.49 9.37 33.15 3.51
4048 4204 6.306643 TCACTCATACAATATGGTTGGTCA 57.693 37.500 0.00 0.00 0.00 4.02
4049 4205 7.807977 ATTCACTCATACAATATGGTTGGTC 57.192 36.000 0.00 0.00 0.00 4.02
4084 4240 5.368256 AAGACTGTCATGTCATCAAAAGC 57.632 39.130 10.88 0.00 39.27 3.51
4171 4341 9.651913 TTCTTAATTAATGAATGAGGCAAAACC 57.348 29.630 0.00 0.00 39.61 3.27
4200 4374 4.411256 TCCGTCAGTTAACCAACTCTTT 57.589 40.909 0.88 0.00 43.30 2.52
4202 4376 4.411256 TTTCCGTCAGTTAACCAACTCT 57.589 40.909 0.88 0.00 43.30 3.24
4203 4377 4.260907 GGTTTTCCGTCAGTTAACCAACTC 60.261 45.833 0.88 0.00 43.30 3.01
4204 4378 3.628942 GGTTTTCCGTCAGTTAACCAACT 59.371 43.478 0.88 0.00 46.15 3.16
4206 4380 3.618351 TGGTTTTCCGTCAGTTAACCAA 58.382 40.909 0.88 0.00 43.70 3.67
4207 4381 3.118334 TCTGGTTTTCCGTCAGTTAACCA 60.118 43.478 0.88 0.00 44.26 3.67
4208 4382 3.249320 GTCTGGTTTTCCGTCAGTTAACC 59.751 47.826 0.88 0.00 44.36 2.85
4213 4388 0.748450 TCGTCTGGTTTTCCGTCAGT 59.252 50.000 0.00 0.00 44.36 3.41
4219 4394 2.394545 CGGTTTTCGTCTGGTTTTCC 57.605 50.000 0.00 0.00 41.14 3.13
4240 4415 3.622612 TCGCATGTGTGGTCAAGATTATG 59.377 43.478 6.09 0.00 0.00 1.90
4242 4417 3.326836 TCGCATGTGTGGTCAAGATTA 57.673 42.857 6.09 0.00 0.00 1.75
4260 4435 4.430908 GTCCATAGTTTGGGAGTAGTTCG 58.569 47.826 0.00 0.00 46.45 3.95
4273 4448 3.117512 GGGATTCATGTGGGTCCATAGTT 60.118 47.826 0.00 0.00 32.31 2.24
4280 4455 2.459555 ATTGGGGATTCATGTGGGTC 57.540 50.000 0.00 0.00 0.00 4.46
4299 4474 7.225931 GGACTGATTCTGTGTTAACTGTGTTTA 59.774 37.037 7.22 0.00 0.00 2.01
4307 4482 4.150098 GTGTCGGACTGATTCTGTGTTAAC 59.850 45.833 9.88 0.00 31.65 2.01
4309 4484 3.305813 GGTGTCGGACTGATTCTGTGTTA 60.306 47.826 9.88 0.00 31.65 2.41
4319 4494 2.137528 TGCTTGGGTGTCGGACTGA 61.138 57.895 9.88 0.00 0.00 3.41
4393 4568 2.492019 TGTGTCTGTTGTCTCTGTCG 57.508 50.000 0.00 0.00 0.00 4.35
4406 4581 1.188219 ACGTGGGCTCAGATGTGTCT 61.188 55.000 0.00 0.00 34.14 3.41
4411 4586 0.817654 TGTAGACGTGGGCTCAGATG 59.182 55.000 0.00 0.00 0.00 2.90
4420 4595 3.928727 TTGTCTAGGTTGTAGACGTGG 57.071 47.619 0.00 0.00 45.05 4.94
4425 4600 8.977412 TCATGATACATTTGTCTAGGTTGTAGA 58.023 33.333 0.00 0.00 0.00 2.59
4426 4601 9.599866 TTCATGATACATTTGTCTAGGTTGTAG 57.400 33.333 0.00 0.00 0.00 2.74
4428 4603 8.862325 TTTCATGATACATTTGTCTAGGTTGT 57.138 30.769 0.00 0.00 0.00 3.32
4441 4616 5.889853 AGGTGCAGATGTTTTCATGATACAT 59.110 36.000 18.65 18.65 41.05 2.29
4442 4617 5.255687 AGGTGCAGATGTTTTCATGATACA 58.744 37.500 12.06 12.06 41.05 2.29
4443 4618 5.220931 GGAGGTGCAGATGTTTTCATGATAC 60.221 44.000 0.00 0.00 41.05 2.24
4444 4619 4.883585 GGAGGTGCAGATGTTTTCATGATA 59.116 41.667 0.00 0.00 41.05 2.15
4445 4620 3.698040 GGAGGTGCAGATGTTTTCATGAT 59.302 43.478 0.00 0.00 41.05 2.45
4446 4621 3.084039 GGAGGTGCAGATGTTTTCATGA 58.916 45.455 0.00 0.00 41.05 3.07
4447 4622 2.165030 GGGAGGTGCAGATGTTTTCATG 59.835 50.000 0.00 0.00 41.05 3.07
4448 4623 2.450476 GGGAGGTGCAGATGTTTTCAT 58.550 47.619 0.00 0.00 43.99 2.57
4449 4624 1.547675 GGGGAGGTGCAGATGTTTTCA 60.548 52.381 0.00 0.00 0.00 2.69
4450 4625 1.177401 GGGGAGGTGCAGATGTTTTC 58.823 55.000 0.00 0.00 0.00 2.29
4451 4626 0.482446 TGGGGAGGTGCAGATGTTTT 59.518 50.000 0.00 0.00 0.00 2.43
4452 4627 0.706433 ATGGGGAGGTGCAGATGTTT 59.294 50.000 0.00 0.00 0.00 2.83
4453 4628 0.706433 AATGGGGAGGTGCAGATGTT 59.294 50.000 0.00 0.00 0.00 2.71
4454 4629 1.595311 TAATGGGGAGGTGCAGATGT 58.405 50.000 0.00 0.00 0.00 3.06
4455 4630 2.374504 AGATAATGGGGAGGTGCAGATG 59.625 50.000 0.00 0.00 0.00 2.90
4456 4631 2.641815 GAGATAATGGGGAGGTGCAGAT 59.358 50.000 0.00 0.00 0.00 2.90
4457 4632 2.050144 GAGATAATGGGGAGGTGCAGA 58.950 52.381 0.00 0.00 0.00 4.26
4458 4633 2.038295 GAGAGATAATGGGGAGGTGCAG 59.962 54.545 0.00 0.00 0.00 4.41
4459 4634 2.050144 GAGAGATAATGGGGAGGTGCA 58.950 52.381 0.00 0.00 0.00 4.57
4460 4635 2.334023 AGAGAGATAATGGGGAGGTGC 58.666 52.381 0.00 0.00 0.00 5.01
4461 4636 4.202409 GGAAAGAGAGATAATGGGGAGGTG 60.202 50.000 0.00 0.00 0.00 4.00
4462 4637 3.977326 GGAAAGAGAGATAATGGGGAGGT 59.023 47.826 0.00 0.00 0.00 3.85
4463 4638 3.329225 GGGAAAGAGAGATAATGGGGAGG 59.671 52.174 0.00 0.00 0.00 4.30
4464 4639 4.238669 AGGGAAAGAGAGATAATGGGGAG 58.761 47.826 0.00 0.00 0.00 4.30
4465 4640 4.302004 AGGGAAAGAGAGATAATGGGGA 57.698 45.455 0.00 0.00 0.00 4.81
4466 4641 4.723309 CAAGGGAAAGAGAGATAATGGGG 58.277 47.826 0.00 0.00 0.00 4.96
4467 4642 4.140536 GCAAGGGAAAGAGAGATAATGGG 58.859 47.826 0.00 0.00 0.00 4.00
4468 4643 4.578105 GTGCAAGGGAAAGAGAGATAATGG 59.422 45.833 0.00 0.00 0.00 3.16
4469 4644 5.435291 AGTGCAAGGGAAAGAGAGATAATG 58.565 41.667 0.00 0.00 0.00 1.90
4470 4645 5.707066 AGTGCAAGGGAAAGAGAGATAAT 57.293 39.130 0.00 0.00 0.00 1.28
4471 4646 5.249393 AGAAGTGCAAGGGAAAGAGAGATAA 59.751 40.000 0.00 0.00 0.00 1.75
4472 4647 4.780021 AGAAGTGCAAGGGAAAGAGAGATA 59.220 41.667 0.00 0.00 0.00 1.98
4473 4648 3.586618 AGAAGTGCAAGGGAAAGAGAGAT 59.413 43.478 0.00 0.00 0.00 2.75
4474 4649 2.975489 AGAAGTGCAAGGGAAAGAGAGA 59.025 45.455 0.00 0.00 0.00 3.10
4475 4650 3.415457 AGAAGTGCAAGGGAAAGAGAG 57.585 47.619 0.00 0.00 0.00 3.20
4476 4651 4.160329 TCTAGAAGTGCAAGGGAAAGAGA 58.840 43.478 0.00 0.00 0.00 3.10
4477 4652 4.543590 TCTAGAAGTGCAAGGGAAAGAG 57.456 45.455 0.00 0.00 0.00 2.85
4478 4653 5.505181 AATCTAGAAGTGCAAGGGAAAGA 57.495 39.130 0.00 0.00 0.00 2.52
4479 4654 5.942826 AGAAATCTAGAAGTGCAAGGGAAAG 59.057 40.000 0.00 0.00 0.00 2.62
4480 4655 5.880901 AGAAATCTAGAAGTGCAAGGGAAA 58.119 37.500 0.00 0.00 0.00 3.13
4481 4656 5.505181 AGAAATCTAGAAGTGCAAGGGAA 57.495 39.130 0.00 0.00 0.00 3.97
4482 4657 5.491982 GAAGAAATCTAGAAGTGCAAGGGA 58.508 41.667 0.00 0.00 0.00 4.20
4483 4658 4.637977 GGAAGAAATCTAGAAGTGCAAGGG 59.362 45.833 0.00 0.00 0.00 3.95
4484 4659 4.637977 GGGAAGAAATCTAGAAGTGCAAGG 59.362 45.833 0.00 0.00 0.00 3.61
4485 4660 4.331168 CGGGAAGAAATCTAGAAGTGCAAG 59.669 45.833 0.00 0.00 0.00 4.01
4486 4661 4.253685 CGGGAAGAAATCTAGAAGTGCAA 58.746 43.478 0.00 0.00 0.00 4.08
4487 4662 3.260884 ACGGGAAGAAATCTAGAAGTGCA 59.739 43.478 0.00 0.00 0.00 4.57
4488 4663 3.619038 CACGGGAAGAAATCTAGAAGTGC 59.381 47.826 0.00 0.00 0.00 4.40
4489 4664 4.184629 CCACGGGAAGAAATCTAGAAGTG 58.815 47.826 0.00 0.00 0.00 3.16
4490 4665 3.197983 CCCACGGGAAGAAATCTAGAAGT 59.802 47.826 0.00 0.00 37.50 3.01
4491 4666 3.197983 ACCCACGGGAAGAAATCTAGAAG 59.802 47.826 9.72 0.00 38.96 2.85
4492 4667 3.055385 CACCCACGGGAAGAAATCTAGAA 60.055 47.826 9.72 0.00 38.96 2.10
4493 4668 2.500098 CACCCACGGGAAGAAATCTAGA 59.500 50.000 9.72 0.00 38.96 2.43
4494 4669 2.906354 CACCCACGGGAAGAAATCTAG 58.094 52.381 9.72 0.00 38.96 2.43
4495 4670 1.065709 GCACCCACGGGAAGAAATCTA 60.066 52.381 9.72 0.00 38.96 1.98
4496 4671 0.322546 GCACCCACGGGAAGAAATCT 60.323 55.000 9.72 0.00 38.96 2.40
4497 4672 1.313091 GGCACCCACGGGAAGAAATC 61.313 60.000 9.72 0.00 38.96 2.17
4498 4673 1.304134 GGCACCCACGGGAAGAAAT 60.304 57.895 9.72 0.00 38.96 2.17
4499 4674 2.114411 GGCACCCACGGGAAGAAA 59.886 61.111 9.72 0.00 38.96 2.52
4500 4675 3.172106 TGGCACCCACGGGAAGAA 61.172 61.111 9.72 0.00 38.96 2.52
4501 4676 3.636231 CTGGCACCCACGGGAAGA 61.636 66.667 9.72 0.00 38.96 2.87
4502 4677 4.722700 CCTGGCACCCACGGGAAG 62.723 72.222 9.72 1.89 36.43 3.46
4506 4681 4.263572 TCAACCTGGCACCCACGG 62.264 66.667 0.00 0.00 0.00 4.94
4507 4682 2.669569 CTCAACCTGGCACCCACG 60.670 66.667 0.00 0.00 0.00 4.94
4508 4683 2.282462 CCTCAACCTGGCACCCAC 60.282 66.667 0.00 0.00 0.00 4.61
4509 4684 3.579302 CCCTCAACCTGGCACCCA 61.579 66.667 0.00 0.00 0.00 4.51
4510 4685 3.580319 ACCCTCAACCTGGCACCC 61.580 66.667 0.00 0.00 0.00 4.61
4511 4686 2.282462 CACCCTCAACCTGGCACC 60.282 66.667 0.00 0.00 0.00 5.01
4512 4687 1.302832 CTCACCCTCAACCTGGCAC 60.303 63.158 0.00 0.00 0.00 5.01
4513 4688 3.160585 CTCACCCTCAACCTGGCA 58.839 61.111 0.00 0.00 0.00 4.92
4514 4689 2.360475 GCTCACCCTCAACCTGGC 60.360 66.667 0.00 0.00 0.00 4.85
4515 4690 0.322008 GAAGCTCACCCTCAACCTGG 60.322 60.000 0.00 0.00 0.00 4.45
4516 4691 0.397941 TGAAGCTCACCCTCAACCTG 59.602 55.000 0.00 0.00 0.00 4.00
4517 4692 1.280421 GATGAAGCTCACCCTCAACCT 59.720 52.381 0.00 0.00 0.00 3.50
4518 4693 1.680249 GGATGAAGCTCACCCTCAACC 60.680 57.143 0.00 0.00 23.18 3.77
4519 4694 1.280421 AGGATGAAGCTCACCCTCAAC 59.720 52.381 0.00 0.00 34.48 3.18
4520 4695 1.661463 AGGATGAAGCTCACCCTCAA 58.339 50.000 0.00 0.00 34.48 3.02
4521 4696 1.556911 GAAGGATGAAGCTCACCCTCA 59.443 52.381 0.11 0.00 34.48 3.86
4522 4697 1.836802 AGAAGGATGAAGCTCACCCTC 59.163 52.381 0.11 0.00 34.48 4.30
4523 4698 1.963985 AGAAGGATGAAGCTCACCCT 58.036 50.000 0.00 0.00 44.12 4.34
4524 4699 2.363683 CAAGAAGGATGAAGCTCACCC 58.636 52.381 0.00 0.00 26.60 4.61
4525 4700 1.742268 GCAAGAAGGATGAAGCTCACC 59.258 52.381 0.00 0.00 0.00 4.02
4526 4701 2.430465 TGCAAGAAGGATGAAGCTCAC 58.570 47.619 0.00 0.00 0.00 3.51
4527 4702 2.865119 TGCAAGAAGGATGAAGCTCA 57.135 45.000 0.00 0.00 0.00 4.26
4528 4703 4.082354 ACAAATGCAAGAAGGATGAAGCTC 60.082 41.667 0.00 0.00 0.00 4.09
4529 4704 3.830755 ACAAATGCAAGAAGGATGAAGCT 59.169 39.130 0.00 0.00 0.00 3.74
4530 4705 3.924686 CACAAATGCAAGAAGGATGAAGC 59.075 43.478 0.00 0.00 0.00 3.86
4552 4727 2.433868 CATAAGGCATGCATCAAGGC 57.566 50.000 21.36 0.00 0.00 4.35
4561 4736 9.019222 TCAATGTCTCTTGAAGCATAAGGCATG 62.019 40.741 0.32 0.00 36.14 4.06
4562 4737 7.082287 TCAATGTCTCTTGAAGCATAAGGCAT 61.082 38.462 0.00 0.00 36.14 4.40
4563 4738 5.804120 TCAATGTCTCTTGAAGCATAAGGCA 60.804 40.000 0.00 0.00 36.14 4.75
4564 4739 4.637534 TCAATGTCTCTTGAAGCATAAGGC 59.362 41.667 0.00 0.00 34.84 4.35
4565 4740 6.748333 TTCAATGTCTCTTGAAGCATAAGG 57.252 37.500 0.00 0.00 39.55 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.