Multiple sequence alignment - TraesCS1A01G194400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G194400 chr1A 100.000 5525 0 0 1 5525 351609126 351603602 0.000000e+00 10203.0
1 TraesCS1A01G194400 chr1A 100.000 80 0 0 2368 2447 351606679 351606600 1.240000e-31 148.0
2 TraesCS1A01G194400 chr1A 100.000 80 0 0 2448 2527 351606759 351606680 1.240000e-31 148.0
3 TraesCS1A01G194400 chr1A 91.803 61 5 0 5464 5524 220986480 220986540 9.860000e-13 86.1
4 TraesCS1A01G194400 chr1A 96.154 52 2 0 4985 5036 334075560 334075509 9.860000e-13 86.1
5 TraesCS1A01G194400 chr1B 91.818 1821 82 20 19 1825 379632222 379630455 0.000000e+00 2475.0
6 TraesCS1A01G194400 chr1B 94.138 1160 52 3 2448 3596 379630109 379628955 0.000000e+00 1751.0
7 TraesCS1A01G194400 chr1B 95.823 790 25 3 3677 4460 379628951 379628164 0.000000e+00 1269.0
8 TraesCS1A01G194400 chr1B 96.254 347 10 3 1927 2272 379630454 379630110 2.890000e-157 566.0
9 TraesCS1A01G194400 chr1B 90.268 411 37 3 4755 5164 379627134 379626726 8.150000e-148 534.0
10 TraesCS1A01G194400 chr1B 92.079 202 15 1 5216 5416 379626726 379626525 3.260000e-72 283.0
11 TraesCS1A01G194400 chr1B 93.220 118 7 1 2261 2378 359902151 359902035 7.360000e-39 172.0
12 TraesCS1A01G194400 chr1B 98.837 86 1 0 2362 2447 379630115 379630030 2.670000e-33 154.0
13 TraesCS1A01G194400 chr1D 95.954 865 28 5 965 1825 279524294 279523433 0.000000e+00 1397.0
14 TraesCS1A01G194400 chr1D 87.225 955 64 18 1 937 279525808 279524894 0.000000e+00 1035.0
15 TraesCS1A01G194400 chr1D 91.138 756 45 16 3672 4417 279522773 279522030 0.000000e+00 1005.0
16 TraesCS1A01G194400 chr1D 90.789 760 57 11 4415 5168 279521947 279521195 0.000000e+00 1003.0
17 TraesCS1A01G194400 chr1D 94.400 250 11 3 5223 5470 279518881 279518633 1.120000e-101 381.0
18 TraesCS1A01G194400 chr1D 86.585 328 37 4 1929 2255 279523434 279523113 6.810000e-94 355.0
19 TraesCS1A01G194400 chr1D 82.746 284 22 3 2448 2731 279523096 279522840 1.550000e-55 228.0
20 TraesCS1A01G194400 chr1D 91.566 83 7 0 2364 2446 279523100 279523018 1.260000e-21 115.0
21 TraesCS1A01G194400 chr1D 93.103 58 4 0 5467 5524 329077796 329077739 9.860000e-13 86.1
22 TraesCS1A01G194400 chr5A 81.958 521 66 12 41 536 491567196 491567713 3.080000e-112 416.0
23 TraesCS1A01G194400 chr5A 77.232 448 67 18 108 528 31087491 31087930 4.300000e-56 230.0
24 TraesCS1A01G194400 chr5A 94.792 96 3 1 3590 3683 450750795 450750700 1.240000e-31 148.0
25 TraesCS1A01G194400 chr5A 97.222 36 1 0 1815 1850 19681314 19681279 1.660000e-05 62.1
26 TraesCS1A01G194400 chr6A 81.262 523 59 21 41 536 130409412 130409922 2.410000e-103 387.0
27 TraesCS1A01G194400 chr6A 81.746 378 53 12 4530 4897 52713127 52712756 8.990000e-78 302.0
28 TraesCS1A01G194400 chr6A 81.443 388 55 13 4520 4897 566434228 566434608 8.990000e-78 302.0
29 TraesCS1A01G194400 chr3D 83.738 412 54 11 4530 4934 11154169 11154574 1.450000e-100 377.0
30 TraesCS1A01G194400 chr3D 97.115 104 3 0 2269 2372 609574370 609574267 5.690000e-40 176.0
31 TraesCS1A01G194400 chr3D 91.753 97 6 2 3592 3686 594890948 594890852 3.470000e-27 134.0
32 TraesCS1A01G194400 chr3D 94.444 36 2 0 1815 1850 2148734 2148699 7.730000e-04 56.5
33 TraesCS1A01G194400 chr3D 96.970 33 0 1 1815 1847 368345998 368346029 3.000000e-03 54.7
34 TraesCS1A01G194400 chr2D 80.258 542 63 28 31 541 304218517 304219045 8.740000e-98 368.0
35 TraesCS1A01G194400 chr2D 80.193 414 62 17 4530 4934 567011090 567010688 5.410000e-75 292.0
36 TraesCS1A01G194400 chr2D 94.118 68 3 1 1875 1941 638164350 638164283 9.790000e-18 102.0
37 TraesCS1A01G194400 chr2D 93.333 60 4 0 5465 5524 478981848 478981907 7.620000e-14 89.8
38 TraesCS1A01G194400 chr2D 93.103 58 4 0 5467 5524 385843319 385843376 9.860000e-13 86.1
39 TraesCS1A01G194400 chr2A 79.401 534 65 28 41 541 382252536 382253057 8.870000e-88 335.0
40 TraesCS1A01G194400 chr2A 96.226 53 2 0 4984 5036 735174164 735174216 2.740000e-13 87.9
41 TraesCS1A01G194400 chr6B 82.228 377 52 11 4530 4897 438088476 438088846 1.490000e-80 311.0
42 TraesCS1A01G194400 chr6B 82.011 378 52 11 4530 4897 716468675 716469046 1.930000e-79 307.0
43 TraesCS1A01G194400 chr6B 95.455 110 4 1 2258 2367 641674057 641674165 2.050000e-39 174.0
44 TraesCS1A01G194400 chr6B 96.970 33 1 0 1819 1851 534090497 534090465 7.730000e-04 56.5
45 TraesCS1A01G194400 chr7B 81.627 381 53 12 4527 4897 481946561 481946934 3.240000e-77 300.0
46 TraesCS1A01G194400 chr7B 97.170 106 3 0 2269 2374 589348319 589348424 4.400000e-41 180.0
47 TraesCS1A01G194400 chr7B 93.913 115 5 1 2253 2365 508189367 508189481 7.360000e-39 172.0
48 TraesCS1A01G194400 chr7D 80.000 420 61 21 4527 4934 179538596 179538188 7.000000e-74 289.0
49 TraesCS1A01G194400 chr7D 96.226 106 4 0 2269 2374 545397538 545397643 2.050000e-39 174.0
50 TraesCS1A01G194400 chr7D 93.103 58 4 0 5467 5524 385908766 385908823 9.860000e-13 86.1
51 TraesCS1A01G194400 chr7D 97.143 35 1 0 1816 1850 575148493 575148459 5.980000e-05 60.2
52 TraesCS1A01G194400 chr6D 92.500 160 11 1 377 536 106945817 106945975 1.550000e-55 228.0
53 TraesCS1A01G194400 chr6D 94.203 69 4 0 1874 1942 423084217 423084149 7.570000e-19 106.0
54 TraesCS1A01G194400 chr6D 93.103 58 4 0 5467 5524 452223308 452223365 9.860000e-13 86.1
55 TraesCS1A01G194400 chr4A 87.500 184 17 4 353 536 45869784 45869961 2.020000e-49 207.0
56 TraesCS1A01G194400 chr4A 98.361 61 0 1 1874 1934 37306922 37306863 7.570000e-19 106.0
57 TraesCS1A01G194400 chr5D 95.455 110 5 0 2270 2379 328911653 328911544 5.690000e-40 176.0
58 TraesCS1A01G194400 chr5D 93.750 96 4 2 3590 3683 350331952 350331857 5.770000e-30 143.0
59 TraesCS1A01G194400 chr5D 95.455 66 1 2 1874 1939 326457624 326457687 2.720000e-18 104.0
60 TraesCS1A01G194400 chr5D 93.103 58 4 0 5467 5524 229598401 229598458 9.860000e-13 86.1
61 TraesCS1A01G194400 chr5D 93.103 58 4 0 5467 5524 229892340 229892397 9.860000e-13 86.1
62 TraesCS1A01G194400 chr5D 96.970 33 1 0 1815 1847 370167730 370167762 7.730000e-04 56.5
63 TraesCS1A01G194400 chr4B 85.227 176 21 4 363 536 639969319 639969491 5.690000e-40 176.0
64 TraesCS1A01G194400 chr4B 97.059 102 2 1 2268 2369 28147548 28147648 2.650000e-38 171.0
65 TraesCS1A01G194400 chr4B 93.478 92 4 2 3591 3680 524708515 524708424 9.650000e-28 135.0
66 TraesCS1A01G194400 chr4B 96.875 32 1 0 1819 1850 636168625 636168594 3.000000e-03 54.7
67 TraesCS1A01G194400 chr7A 96.226 106 4 0 2269 2374 628008574 628008469 2.050000e-39 174.0
68 TraesCS1A01G194400 chr5B 95.556 90 2 2 3592 3679 62940322 62940411 5.770000e-30 143.0
69 TraesCS1A01G194400 chr5B 95.402 87 4 0 3590 3676 278886781 278886867 7.460000e-29 139.0
70 TraesCS1A01G194400 chr5B 92.708 96 5 1 3590 3683 411034865 411034770 2.680000e-28 137.0
71 TraesCS1A01G194400 chr5B 94.030 67 2 2 1874 1940 98836080 98836016 3.520000e-17 100.0
72 TraesCS1A01G194400 chr5B 93.333 60 4 0 5465 5524 576303336 576303395 7.620000e-14 89.8
73 TraesCS1A01G194400 chr5B 97.059 34 1 0 1814 1847 439424278 439424311 2.150000e-04 58.4
74 TraesCS1A01G194400 chr5B 91.892 37 3 0 1820 1856 277248105 277248069 1.000000e-02 52.8
75 TraesCS1A01G194400 chr4D 94.382 89 3 1 3593 3679 379147278 379147190 9.650000e-28 135.0
76 TraesCS1A01G194400 chr4D 98.413 63 0 1 1874 1935 36603152 36603214 5.850000e-20 110.0
77 TraesCS1A01G194400 chr4D 100.000 58 0 0 1874 1931 64390576 64390633 2.100000e-19 108.0
78 TraesCS1A01G194400 chr3A 93.333 90 6 0 3597 3686 725840304 725840215 3.470000e-27 134.0
79 TraesCS1A01G194400 chr3A 90.000 80 5 2 1874 1952 238686266 238686189 3.520000e-17 100.0
80 TraesCS1A01G194400 chr2B 100.000 58 0 0 1874 1931 497861470 497861527 2.100000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G194400 chr1A 351603602 351609126 5524 True 3499.666667 10203 100.000000 1 5525 3 chr1A.!!$R2 5524
1 TraesCS1A01G194400 chr1B 379626525 379632222 5697 True 1004.571429 2475 94.173857 19 5416 7 chr1B.!!$R2 5397
2 TraesCS1A01G194400 chr1D 279518633 279525808 7175 True 689.875000 1397 90.050375 1 5470 8 chr1D.!!$R2 5469
3 TraesCS1A01G194400 chr5A 491567196 491567713 517 False 416.000000 416 81.958000 41 536 1 chr5A.!!$F2 495
4 TraesCS1A01G194400 chr6A 130409412 130409922 510 False 387.000000 387 81.262000 41 536 1 chr6A.!!$F1 495
5 TraesCS1A01G194400 chr2D 304218517 304219045 528 False 368.000000 368 80.258000 31 541 1 chr2D.!!$F1 510
6 TraesCS1A01G194400 chr2A 382252536 382253057 521 False 335.000000 335 79.401000 41 541 1 chr2A.!!$F1 500

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
825 890 1.098050 GGGCGATGATCTGTTTGCTT 58.902 50.000 0.0 0.0 0.00 3.91 F
1442 2085 1.270625 CGAGTTGGTGAGGTTTAGCCA 60.271 52.381 0.0 0.0 40.61 4.75 F
2182 2829 0.798776 CATTCACCACCTGCTCGAAC 59.201 55.000 0.0 0.0 0.00 3.95 F
2285 2932 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.0 0.0 0.00 3.28 F
2996 3643 0.187117 TTGGTGCCTCCCAATGTGAA 59.813 50.000 0.0 0.0 39.56 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1915 2561 0.108281 GTTGCTACTCCCTCCGTTCC 60.108 60.0 0.00 0.0 0.0 3.62 R
2266 2913 0.115745 TTTGGGACGGAGGGAGTACT 59.884 55.0 0.00 0.0 0.0 2.73 R
3489 4144 0.111061 ATGCAAGCTGAGTCCACCAA 59.889 50.0 0.00 0.0 0.0 3.67 R
3583 4241 1.516110 TAGAGGGAGTACTAGGCGGT 58.484 55.0 0.00 0.0 0.0 5.68 R
4959 6524 1.032014 TTCTGACTTGGCCTTTGTGC 58.968 50.0 3.32 0.0 0.0 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 2.663196 GCGGCCTGGTTGACTAGT 59.337 61.111 0.00 0.00 0.00 2.57
53 60 3.494398 GGTTGGGCCTTCTTTTCTTTTCC 60.494 47.826 4.53 0.00 0.00 3.13
54 61 3.039252 TGGGCCTTCTTTTCTTTTCCA 57.961 42.857 4.53 0.00 0.00 3.53
91 100 6.479660 TGCCTTCTGTTGTCATTTTTCAAATC 59.520 34.615 0.00 0.00 0.00 2.17
140 151 3.349927 AGTGTTTCTAAATTACCCCGGC 58.650 45.455 0.00 0.00 0.00 6.13
148 159 4.998672 TCTAAATTACCCCGGCAATATTCG 59.001 41.667 0.00 0.00 0.00 3.34
178 190 2.969262 TGAACATTTCCCCAAGGGTTTC 59.031 45.455 4.11 0.00 44.74 2.78
180 192 2.889512 ACATTTCCCCAAGGGTTTCTC 58.110 47.619 4.11 0.00 44.74 2.87
211 223 7.976135 TGCAATTTGCCAAATTAACTAATGT 57.024 28.000 18.27 0.00 44.23 2.71
340 361 7.382898 GTCCACTCAAAATAAATAGGGCAAAA 58.617 34.615 0.00 0.00 0.00 2.44
341 362 7.330946 GTCCACTCAAAATAAATAGGGCAAAAC 59.669 37.037 0.00 0.00 0.00 2.43
457 505 4.338118 TGTTGTCCTTGTTAGCCTCAAAAG 59.662 41.667 0.00 0.00 0.00 2.27
607 670 2.610859 GAAGAGGGTGGGGAGCCA 60.611 66.667 0.00 0.00 0.00 4.75
643 707 3.371063 GGTCGTGAGTGCGGGAGA 61.371 66.667 0.00 0.00 0.00 3.71
670 734 1.203994 GCAACTAGGTCTCCGCAACTA 59.796 52.381 0.00 0.00 0.00 2.24
750 814 7.118971 GGGCATCAAATTTACAATTAGTTGCAA 59.881 33.333 0.00 0.00 38.96 4.08
751 815 8.667463 GGCATCAAATTTACAATTAGTTGCAAT 58.333 29.630 0.59 0.00 38.96 3.56
819 884 1.287191 CGATCGGGCGATGATCTGT 59.713 57.895 7.38 0.00 40.05 3.41
821 886 1.869754 CGATCGGGCGATGATCTGTTT 60.870 52.381 7.38 0.00 40.05 2.83
825 890 1.098050 GGGCGATGATCTGTTTGCTT 58.902 50.000 0.00 0.00 0.00 3.91
883 948 2.095853 CACAGGAAAAATGATCCGACGG 59.904 50.000 7.84 7.84 42.03 4.79
886 951 1.680860 GGAAAAATGATCCGACGGGGT 60.681 52.381 15.25 2.86 37.00 4.95
901 966 2.562298 ACGGGGTAACGTGAATCTAACA 59.438 45.455 0.00 0.00 46.64 2.41
907 974 4.334481 GGTAACGTGAATCTAACAATGGGG 59.666 45.833 0.00 0.00 0.00 4.96
952 1025 2.793278 AAAACAGATTTGGGTCGTGC 57.207 45.000 0.00 0.00 0.00 5.34
962 1035 1.966451 GGGTCGTGCAAACAGAGGG 60.966 63.158 0.00 0.00 0.00 4.30
1239 1882 4.790962 CTCCGACGACCTCCGGGA 62.791 72.222 0.00 0.00 45.36 5.14
1240 1883 4.119363 TCCGACGACCTCCGGGAT 62.119 66.667 0.00 0.00 45.36 3.85
1372 2015 1.800805 CTCAATTCGTGCTGTCCAGT 58.199 50.000 0.00 0.00 0.00 4.00
1398 2041 1.738099 CCCGCGAGAAGGTGAGTTG 60.738 63.158 8.23 0.00 0.00 3.16
1442 2085 1.270625 CGAGTTGGTGAGGTTTAGCCA 60.271 52.381 0.00 0.00 40.61 4.75
1619 2262 3.158676 AGGATCAGCTAGGATTCGGTAC 58.841 50.000 0.00 0.00 0.00 3.34
1665 2308 4.832266 TCCTAAACTGGATGTGCATTGTTT 59.168 37.500 0.00 12.51 0.00 2.83
1709 2352 5.128919 CCCTCATATATAAGCCTGATTGCC 58.871 45.833 0.00 0.00 0.00 4.52
1825 2471 6.026513 GCAAGCATCAGAAATTCAGAACTAC 58.973 40.000 0.00 0.00 0.00 2.73
1826 2472 6.128063 GCAAGCATCAGAAATTCAGAACTACT 60.128 38.462 0.00 0.00 0.00 2.57
1827 2473 7.462731 CAAGCATCAGAAATTCAGAACTACTC 58.537 38.462 0.00 0.00 0.00 2.59
1828 2474 6.112058 AGCATCAGAAATTCAGAACTACTCC 58.888 40.000 0.00 0.00 0.00 3.85
1829 2475 5.295540 GCATCAGAAATTCAGAACTACTCCC 59.704 44.000 0.00 0.00 0.00 4.30
1830 2476 6.648192 CATCAGAAATTCAGAACTACTCCCT 58.352 40.000 0.00 0.00 0.00 4.20
1831 2477 6.287589 TCAGAAATTCAGAACTACTCCCTC 57.712 41.667 0.00 0.00 0.00 4.30
1832 2478 5.187967 TCAGAAATTCAGAACTACTCCCTCC 59.812 44.000 0.00 0.00 0.00 4.30
1833 2479 4.160626 AGAAATTCAGAACTACTCCCTCCG 59.839 45.833 0.00 0.00 0.00 4.63
1834 2480 2.599408 TTCAGAACTACTCCCTCCGT 57.401 50.000 0.00 0.00 0.00 4.69
1835 2481 2.599408 TCAGAACTACTCCCTCCGTT 57.401 50.000 0.00 0.00 0.00 4.44
1836 2482 2.444421 TCAGAACTACTCCCTCCGTTC 58.556 52.381 0.00 0.00 36.81 3.95
1837 2483 1.477295 CAGAACTACTCCCTCCGTTCC 59.523 57.143 0.00 0.00 37.15 3.62
1838 2484 1.358445 AGAACTACTCCCTCCGTTCCT 59.642 52.381 0.00 0.00 37.15 3.36
1839 2485 2.579860 AGAACTACTCCCTCCGTTCCTA 59.420 50.000 0.00 0.00 37.15 2.94
1840 2486 3.011032 AGAACTACTCCCTCCGTTCCTAA 59.989 47.826 0.00 0.00 37.15 2.69
1841 2487 3.463048 ACTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
1842 2488 3.991683 ACTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
1843 2489 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
1844 2490 5.713807 ACTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
1845 2491 6.856757 ACTACTCCCTCCGTTCCTAAATATA 58.143 40.000 0.00 0.00 0.00 0.86
1846 2492 7.300658 ACTACTCCCTCCGTTCCTAAATATAA 58.699 38.462 0.00 0.00 0.00 0.98
1847 2493 7.954620 ACTACTCCCTCCGTTCCTAAATATAAT 59.045 37.037 0.00 0.00 0.00 1.28
1848 2494 7.628501 ACTCCCTCCGTTCCTAAATATAATT 57.371 36.000 0.00 0.00 0.00 1.40
1849 2495 7.677892 ACTCCCTCCGTTCCTAAATATAATTC 58.322 38.462 0.00 0.00 0.00 2.17
1850 2496 7.012661 TCCCTCCGTTCCTAAATATAATTCC 57.987 40.000 0.00 0.00 0.00 3.01
1851 2497 6.559539 TCCCTCCGTTCCTAAATATAATTCCA 59.440 38.462 0.00 0.00 0.00 3.53
1852 2498 7.238933 TCCCTCCGTTCCTAAATATAATTCCAT 59.761 37.037 0.00 0.00 0.00 3.41
1853 2499 8.545472 CCCTCCGTTCCTAAATATAATTCCATA 58.455 37.037 0.00 0.00 0.00 2.74
1866 2512 9.865321 AATATAATTCCATATTGTTGCATCAGC 57.135 29.630 0.00 0.00 34.26 4.26
1890 2536 6.097915 ACGGAAGTATGTAGTCCATATTGG 57.902 41.667 0.00 0.00 46.88 3.16
1891 2537 5.836898 ACGGAAGTATGTAGTCCATATTGGA 59.163 40.000 0.00 0.00 44.38 3.53
1892 2538 6.325545 ACGGAAGTATGTAGTCCATATTGGAA 59.674 38.462 0.00 0.00 46.95 3.53
1893 2539 7.016268 ACGGAAGTATGTAGTCCATATTGGAAT 59.984 37.037 1.81 1.81 46.95 3.01
1924 2570 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
1925 2571 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
1960 2606 1.298014 GCTGAGACCCCAGAACAGG 59.702 63.158 0.00 0.00 36.29 4.00
2026 2672 6.273071 AGTCATTGGCTTAACAGAACAAAAC 58.727 36.000 0.00 0.00 0.00 2.43
2178 2825 1.808945 CACTTCATTCACCACCTGCTC 59.191 52.381 0.00 0.00 0.00 4.26
2182 2829 0.798776 CATTCACCACCTGCTCGAAC 59.201 55.000 0.00 0.00 0.00 3.95
2261 2908 3.222603 CCGATAGCCAAGGCCTATTTTT 58.777 45.455 5.16 0.00 43.17 1.94
2281 2928 2.725221 TTCTAGTACTCCCTCCGTCC 57.275 55.000 0.00 0.00 0.00 4.79
2282 2929 0.842635 TCTAGTACTCCCTCCGTCCC 59.157 60.000 0.00 0.00 0.00 4.46
2283 2930 0.549950 CTAGTACTCCCTCCGTCCCA 59.450 60.000 0.00 0.00 0.00 4.37
2284 2931 1.002069 TAGTACTCCCTCCGTCCCAA 58.998 55.000 0.00 0.00 0.00 4.12
2285 2932 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
2286 2933 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
2287 2934 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
2288 2935 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
2289 2936 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
2290 2937 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
2291 2938 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
2292 2939 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
2293 2940 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
2294 2941 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
2295 2942 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
2296 2943 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
2297 2944 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
2298 2945 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
2299 2946 4.083484 CCGTCCCAAAATAAGTGTCTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
2300 2947 4.755123 CGTCCCAAAATAAGTGTCTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
2301 2948 5.238650 CGTCCCAAAATAAGTGTCTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
2302 2949 6.238648 CGTCCCAAAATAAGTGTCTCAACTTT 60.239 38.462 0.00 0.00 40.77 2.66
2303 2950 6.918022 GTCCCAAAATAAGTGTCTCAACTTTG 59.082 38.462 0.00 0.00 40.77 2.77
2304 2951 6.605594 TCCCAAAATAAGTGTCTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
2305 2952 7.776030 TCCCAAAATAAGTGTCTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
2306 2953 7.860872 CCCAAAATAAGTGTCTCAACTTTGTAC 59.139 37.037 0.00 0.00 40.77 2.90
2307 2954 8.621286 CCAAAATAAGTGTCTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
2312 2959 9.694137 ATAAGTGTCTCAACTTTGTACTAACTC 57.306 33.333 0.00 0.00 40.77 3.01
2313 2960 7.349412 AGTGTCTCAACTTTGTACTAACTCT 57.651 36.000 0.00 0.00 0.00 3.24
2314 2961 8.461249 AGTGTCTCAACTTTGTACTAACTCTA 57.539 34.615 0.00 0.00 0.00 2.43
2315 2962 8.569641 AGTGTCTCAACTTTGTACTAACTCTAG 58.430 37.037 0.00 0.00 0.00 2.43
2316 2963 8.351461 GTGTCTCAACTTTGTACTAACTCTAGT 58.649 37.037 0.00 0.00 41.43 2.57
2317 2964 9.565090 TGTCTCAACTTTGTACTAACTCTAGTA 57.435 33.333 0.00 0.00 39.23 1.82
2340 2987 6.846325 ACAAAGTTGTACTAAGCTTGAGAC 57.154 37.500 9.86 4.39 40.16 3.36
2341 2988 6.346096 ACAAAGTTGTACTAAGCTTGAGACA 58.654 36.000 9.86 7.12 40.16 3.41
2342 2989 6.258068 ACAAAGTTGTACTAAGCTTGAGACAC 59.742 38.462 9.86 7.18 40.16 3.67
2343 2990 5.793030 AGTTGTACTAAGCTTGAGACACT 57.207 39.130 9.86 7.29 0.00 3.55
2344 2991 6.163135 AGTTGTACTAAGCTTGAGACACTT 57.837 37.500 9.86 0.00 0.00 3.16
2345 2992 7.286215 AGTTGTACTAAGCTTGAGACACTTA 57.714 36.000 9.86 0.00 0.00 2.24
2346 2993 7.897864 AGTTGTACTAAGCTTGAGACACTTAT 58.102 34.615 9.86 0.00 0.00 1.73
2347 2994 8.368668 AGTTGTACTAAGCTTGAGACACTTATT 58.631 33.333 9.86 0.00 0.00 1.40
2348 2995 8.989980 GTTGTACTAAGCTTGAGACACTTATTT 58.010 33.333 9.86 0.00 0.00 1.40
2349 2996 9.555727 TTGTACTAAGCTTGAGACACTTATTTT 57.444 29.630 9.86 0.00 0.00 1.82
2350 2997 8.988934 TGTACTAAGCTTGAGACACTTATTTTG 58.011 33.333 9.86 0.00 0.00 2.44
2351 2998 7.440523 ACTAAGCTTGAGACACTTATTTTGG 57.559 36.000 9.86 0.00 0.00 3.28
2352 2999 5.712152 AAGCTTGAGACACTTATTTTGGG 57.288 39.130 0.00 0.00 0.00 4.12
2353 3000 4.985538 AGCTTGAGACACTTATTTTGGGA 58.014 39.130 0.00 0.00 0.00 4.37
2354 3001 5.574188 AGCTTGAGACACTTATTTTGGGAT 58.426 37.500 0.00 0.00 0.00 3.85
2355 3002 5.416952 AGCTTGAGACACTTATTTTGGGATG 59.583 40.000 0.00 0.00 0.00 3.51
2356 3003 5.393461 GCTTGAGACACTTATTTTGGGATGG 60.393 44.000 0.00 0.00 0.00 3.51
2357 3004 5.512942 TGAGACACTTATTTTGGGATGGA 57.487 39.130 0.00 0.00 0.00 3.41
2358 3005 5.500234 TGAGACACTTATTTTGGGATGGAG 58.500 41.667 0.00 0.00 0.00 3.86
2359 3006 4.860022 AGACACTTATTTTGGGATGGAGG 58.140 43.478 0.00 0.00 0.00 4.30
2360 3007 3.954258 GACACTTATTTTGGGATGGAGGG 59.046 47.826 0.00 0.00 0.00 4.30
2427 3074 1.547372 GATTGCTGCAGTTCCAACCAT 59.453 47.619 16.64 0.00 0.00 3.55
2428 3075 2.284754 TTGCTGCAGTTCCAACCATA 57.715 45.000 16.64 0.00 0.00 2.74
2429 3076 2.284754 TGCTGCAGTTCCAACCATAA 57.715 45.000 16.64 0.00 0.00 1.90
2430 3077 1.885887 TGCTGCAGTTCCAACCATAAC 59.114 47.619 16.64 0.00 0.00 1.89
2431 3078 1.202348 GCTGCAGTTCCAACCATAACC 59.798 52.381 16.64 0.00 0.00 2.85
2432 3079 2.513753 CTGCAGTTCCAACCATAACCA 58.486 47.619 5.25 0.00 0.00 3.67
2433 3080 2.489329 CTGCAGTTCCAACCATAACCAG 59.511 50.000 5.25 0.00 0.00 4.00
2434 3081 1.202348 GCAGTTCCAACCATAACCAGC 59.798 52.381 0.00 0.00 0.00 4.85
2435 3082 1.818674 CAGTTCCAACCATAACCAGCC 59.181 52.381 0.00 0.00 0.00 4.85
2436 3083 1.182667 GTTCCAACCATAACCAGCCC 58.817 55.000 0.00 0.00 0.00 5.19
2437 3084 1.080638 TTCCAACCATAACCAGCCCT 58.919 50.000 0.00 0.00 0.00 5.19
2438 3085 1.080638 TCCAACCATAACCAGCCCTT 58.919 50.000 0.00 0.00 0.00 3.95
2439 3086 1.431243 TCCAACCATAACCAGCCCTTT 59.569 47.619 0.00 0.00 0.00 3.11
2440 3087 1.824852 CCAACCATAACCAGCCCTTTC 59.175 52.381 0.00 0.00 0.00 2.62
2441 3088 2.557452 CCAACCATAACCAGCCCTTTCT 60.557 50.000 0.00 0.00 0.00 2.52
2442 3089 2.755103 CAACCATAACCAGCCCTTTCTC 59.245 50.000 0.00 0.00 0.00 2.87
2443 3090 1.992557 ACCATAACCAGCCCTTTCTCA 59.007 47.619 0.00 0.00 0.00 3.27
2444 3091 2.582636 ACCATAACCAGCCCTTTCTCAT 59.417 45.455 0.00 0.00 0.00 2.90
2445 3092 3.011708 ACCATAACCAGCCCTTTCTCATT 59.988 43.478 0.00 0.00 0.00 2.57
2446 3093 3.633986 CCATAACCAGCCCTTTCTCATTC 59.366 47.826 0.00 0.00 0.00 2.67
2447 3094 2.978156 AACCAGCCCTTTCTCATTCA 57.022 45.000 0.00 0.00 0.00 2.57
2448 3095 2.978156 ACCAGCCCTTTCTCATTCAA 57.022 45.000 0.00 0.00 0.00 2.69
2449 3096 3.463048 ACCAGCCCTTTCTCATTCAAT 57.537 42.857 0.00 0.00 0.00 2.57
2450 3097 3.782992 ACCAGCCCTTTCTCATTCAATT 58.217 40.909 0.00 0.00 0.00 2.32
2451 3098 4.934356 ACCAGCCCTTTCTCATTCAATTA 58.066 39.130 0.00 0.00 0.00 1.40
2452 3099 4.706962 ACCAGCCCTTTCTCATTCAATTAC 59.293 41.667 0.00 0.00 0.00 1.89
2453 3100 4.706476 CCAGCCCTTTCTCATTCAATTACA 59.294 41.667 0.00 0.00 0.00 2.41
2454 3101 5.361857 CCAGCCCTTTCTCATTCAATTACAT 59.638 40.000 0.00 0.00 0.00 2.29
2455 3102 6.270815 CAGCCCTTTCTCATTCAATTACATG 58.729 40.000 0.00 0.00 0.00 3.21
2456 3103 5.045872 GCCCTTTCTCATTCAATTACATGC 58.954 41.667 0.00 0.00 0.00 4.06
2457 3104 5.394443 GCCCTTTCTCATTCAATTACATGCA 60.394 40.000 0.00 0.00 0.00 3.96
2458 3105 6.684613 GCCCTTTCTCATTCAATTACATGCAT 60.685 38.462 0.00 0.00 0.00 3.96
2459 3106 6.921857 CCCTTTCTCATTCAATTACATGCATC 59.078 38.462 0.00 0.00 0.00 3.91
2460 3107 7.417003 CCCTTTCTCATTCAATTACATGCATCA 60.417 37.037 0.00 0.00 0.00 3.07
2461 3108 8.141909 CCTTTCTCATTCAATTACATGCATCAT 58.858 33.333 0.00 0.00 0.00 2.45
2462 3109 9.529325 CTTTCTCATTCAATTACATGCATCATT 57.471 29.630 0.00 0.00 0.00 2.57
2468 3115 9.830294 CATTCAATTACATGCATCATTATACGT 57.170 29.630 0.00 0.00 0.00 3.57
2476 3123 8.887036 ACATGCATCATTATACGTTTTCTAGA 57.113 30.769 0.00 0.00 0.00 2.43
2477 3124 9.494271 ACATGCATCATTATACGTTTTCTAGAT 57.506 29.630 0.00 0.00 0.00 1.98
2492 3139 9.081997 CGTTTTCTAGATAGATCATAGGATTGC 57.918 37.037 0.00 0.00 32.67 3.56
2495 3142 7.345422 TCTAGATAGATCATAGGATTGCTGC 57.655 40.000 0.00 0.00 32.67 5.25
2496 3143 6.894103 TCTAGATAGATCATAGGATTGCTGCA 59.106 38.462 0.00 0.00 32.67 4.41
2497 3144 5.979993 AGATAGATCATAGGATTGCTGCAG 58.020 41.667 10.11 10.11 32.67 4.41
2498 3145 5.484644 AGATAGATCATAGGATTGCTGCAGT 59.515 40.000 16.64 0.00 32.67 4.40
2499 3146 4.434545 AGATCATAGGATTGCTGCAGTT 57.565 40.909 16.64 0.05 32.67 3.16
2500 3147 4.387598 AGATCATAGGATTGCTGCAGTTC 58.612 43.478 16.64 9.98 32.67 3.01
2501 3148 2.923121 TCATAGGATTGCTGCAGTTCC 58.077 47.619 16.64 20.10 0.00 3.62
2502 3149 2.239402 TCATAGGATTGCTGCAGTTCCA 59.761 45.455 25.91 16.52 0.00 3.53
2503 3150 2.877097 TAGGATTGCTGCAGTTCCAA 57.123 45.000 25.91 17.54 0.00 3.53
2504 3151 1.251251 AGGATTGCTGCAGTTCCAAC 58.749 50.000 25.91 12.59 0.00 3.77
2505 3152 0.244721 GGATTGCTGCAGTTCCAACC 59.755 55.000 21.80 10.88 0.00 3.77
2506 3153 0.961019 GATTGCTGCAGTTCCAACCA 59.039 50.000 16.64 0.00 0.00 3.67
2626 3273 4.103365 AGCAGACGACAGTTCTTATCAG 57.897 45.455 0.00 0.00 0.00 2.90
2642 3289 0.527600 TCAGCGCCAGTAAGCATACG 60.528 55.000 2.29 0.00 37.11 3.06
2703 3350 7.703621 CACAAAGGATAAACTGATGGCTTATTG 59.296 37.037 0.00 0.00 0.00 1.90
2707 3354 7.118723 AGGATAAACTGATGGCTTATTGTTCA 58.881 34.615 0.00 0.00 0.00 3.18
2726 3373 2.299582 TCAACACTTCAATTGCCCATGG 59.700 45.455 4.14 4.14 0.00 3.66
2755 3402 4.598406 TGTGATGTAGCACAAAATAGCG 57.402 40.909 0.00 0.00 45.08 4.26
2756 3403 4.000325 TGTGATGTAGCACAAAATAGCGT 59.000 39.130 0.00 0.00 45.08 5.07
2760 3407 3.394719 TGTAGCACAAAATAGCGTGACA 58.605 40.909 0.00 0.00 35.02 3.58
2784 3431 3.334583 AATTGTGCGTGTAGATGTCCT 57.665 42.857 0.00 0.00 0.00 3.85
2787 3434 1.067846 TGTGCGTGTAGATGTCCTGAC 60.068 52.381 0.00 0.00 0.00 3.51
2794 3441 4.246458 GTGTAGATGTCCTGACCTTTCAC 58.754 47.826 0.00 0.00 0.00 3.18
2819 3466 3.579709 ACATGCAAAACAACAACGAACA 58.420 36.364 0.00 0.00 0.00 3.18
2838 3485 1.361668 AACGGCAGCAATAGTCGCAG 61.362 55.000 0.00 0.00 0.00 5.18
2841 3488 0.744414 GGCAGCAATAGTCGCAGGAA 60.744 55.000 0.00 0.00 0.00 3.36
2862 3509 9.284968 CAGGAAAAATAGACCTAGAAGAACAAA 57.715 33.333 0.00 0.00 32.35 2.83
2941 3588 0.248565 AGATCAGACGCATGCACAGT 59.751 50.000 19.57 7.54 0.00 3.55
2944 3591 0.737367 TCAGACGCATGCACAGTAGC 60.737 55.000 19.57 0.00 0.00 3.58
2989 3636 1.852157 ACATCCTTGGTGCCTCCCA 60.852 57.895 0.00 0.00 34.77 4.37
2990 3637 1.383799 CATCCTTGGTGCCTCCCAA 59.616 57.895 0.00 0.00 42.16 4.12
2996 3643 0.187117 TTGGTGCCTCCCAATGTGAA 59.813 50.000 0.00 0.00 39.56 3.18
2998 3645 1.598701 GGTGCCTCCCAATGTGAAGC 61.599 60.000 0.00 0.00 0.00 3.86
3010 3657 4.466828 CAATGTGAAGCGTTTTCTGGTAG 58.533 43.478 3.99 0.00 0.00 3.18
3065 3712 0.244994 CTCCTGGGACAAGACTGACG 59.755 60.000 0.00 0.00 38.70 4.35
3070 3717 1.186267 GGGACAAGACTGACGACCCT 61.186 60.000 0.00 0.00 33.79 4.34
3094 3741 1.763968 TATCTCCGACTCACACCAGG 58.236 55.000 0.00 0.00 0.00 4.45
3095 3742 0.251832 ATCTCCGACTCACACCAGGT 60.252 55.000 0.00 0.00 0.00 4.00
3137 3784 3.487120 ACCGACTTAAAAGCTGAGGTT 57.513 42.857 0.00 0.00 0.00 3.50
3260 3907 2.582728 TTGTTTGCTTGCACTCTTGG 57.417 45.000 0.00 0.00 0.00 3.61
3276 3923 2.169978 TCTTGGACTGCTCCATCATCAG 59.830 50.000 0.00 0.00 46.64 2.90
3289 3936 7.496920 TGCTCCATCATCAGACATAAAAAGTAG 59.503 37.037 0.00 0.00 0.00 2.57
3291 3938 9.388506 CTCCATCATCAGACATAAAAAGTAGTT 57.611 33.333 0.00 0.00 0.00 2.24
3332 3979 4.099266 TGTCCTTCTTTGGTTCAATTGGTG 59.901 41.667 5.42 0.00 0.00 4.17
3416 4063 6.253298 CGGTATACTTGCATCAAAACAAATGG 59.747 38.462 2.25 0.00 0.00 3.16
3442 4089 6.767902 TCTTGCTTATCTTCTGTTCAACACTT 59.232 34.615 0.00 0.00 0.00 3.16
3489 4144 4.067896 CACGGGAAAGATAATAGCTGCAT 58.932 43.478 1.02 0.00 0.00 3.96
3498 4153 2.814805 AATAGCTGCATTGGTGGACT 57.185 45.000 1.02 0.00 0.00 3.85
3596 4254 6.246420 TCGATATTTTACCGCCTAGTACTC 57.754 41.667 0.00 0.00 0.00 2.59
3597 4255 5.182001 TCGATATTTTACCGCCTAGTACTCC 59.818 44.000 0.00 0.00 0.00 3.85
3598 4256 5.620879 CGATATTTTACCGCCTAGTACTCCC 60.621 48.000 0.00 0.00 0.00 4.30
3599 4257 2.834638 TTTACCGCCTAGTACTCCCT 57.165 50.000 0.00 0.00 0.00 4.20
3600 4258 2.355010 TTACCGCCTAGTACTCCCTC 57.645 55.000 0.00 0.00 0.00 4.30
3601 4259 1.516110 TACCGCCTAGTACTCCCTCT 58.484 55.000 0.00 0.00 0.00 3.69
3602 4260 1.516110 ACCGCCTAGTACTCCCTCTA 58.484 55.000 0.00 0.00 0.00 2.43
3603 4261 1.849039 ACCGCCTAGTACTCCCTCTAA 59.151 52.381 0.00 0.00 0.00 2.10
3604 4262 2.243221 ACCGCCTAGTACTCCCTCTAAA 59.757 50.000 0.00 0.00 0.00 1.85
3605 4263 2.885894 CCGCCTAGTACTCCCTCTAAAG 59.114 54.545 0.00 0.00 0.00 1.85
3606 4264 3.434739 CCGCCTAGTACTCCCTCTAAAGA 60.435 52.174 0.00 0.00 0.00 2.52
3607 4265 4.205587 CGCCTAGTACTCCCTCTAAAGAA 58.794 47.826 0.00 0.00 0.00 2.52
3608 4266 4.643784 CGCCTAGTACTCCCTCTAAAGAAA 59.356 45.833 0.00 0.00 0.00 2.52
3609 4267 5.302313 CGCCTAGTACTCCCTCTAAAGAAAT 59.698 44.000 0.00 0.00 0.00 2.17
3610 4268 6.489361 CGCCTAGTACTCCCTCTAAAGAAATA 59.511 42.308 0.00 0.00 0.00 1.40
3611 4269 7.177041 CGCCTAGTACTCCCTCTAAAGAAATAT 59.823 40.741 0.00 0.00 0.00 1.28
3612 4270 9.531158 GCCTAGTACTCCCTCTAAAGAAATATA 57.469 37.037 0.00 0.00 0.00 0.86
3616 4274 9.816787 AGTACTCCCTCTAAAGAAATATAGGAG 57.183 37.037 0.00 0.00 0.00 3.69
3617 4275 9.590828 GTACTCCCTCTAAAGAAATATAGGAGT 57.409 37.037 12.12 12.12 0.00 3.85
3618 4276 8.485578 ACTCCCTCTAAAGAAATATAGGAGTG 57.514 38.462 7.06 0.00 0.00 3.51
3619 4277 8.068733 ACTCCCTCTAAAGAAATATAGGAGTGT 58.931 37.037 7.06 0.00 0.00 3.55
3620 4278 8.855804 TCCCTCTAAAGAAATATAGGAGTGTT 57.144 34.615 0.00 0.00 0.00 3.32
3621 4279 9.280456 TCCCTCTAAAGAAATATAGGAGTGTTT 57.720 33.333 0.00 0.00 0.00 2.83
3670 4328 9.892130 AACACTCTTATATTTCTTTACAGAGGG 57.108 33.333 0.00 0.00 36.55 4.30
4034 4695 4.221703 AGTCCTGTCATGGTAAGTCAAGAG 59.778 45.833 0.00 0.00 0.00 2.85
4092 4759 2.752903 AGGGTAATTTTTGTGCTAGCGG 59.247 45.455 10.77 0.00 0.00 5.52
4381 5049 4.190001 TGTGTACTTTACCTTGCGAAACA 58.810 39.130 0.00 0.00 0.00 2.83
4382 5050 4.817464 TGTGTACTTTACCTTGCGAAACAT 59.183 37.500 0.00 0.00 0.00 2.71
4392 5060 5.242434 ACCTTGCGAAACATTAGTATGTGA 58.758 37.500 0.00 0.00 44.14 3.58
4393 5061 5.351465 ACCTTGCGAAACATTAGTATGTGAG 59.649 40.000 0.00 0.00 44.14 3.51
4407 5075 4.950475 AGTATGTGAGAAGTTCTGGATCGA 59.050 41.667 10.90 0.00 0.00 3.59
4501 5254 7.676947 TGCATTTACCTGGATACTAAGATACC 58.323 38.462 0.00 0.00 37.61 2.73
4513 5266 8.265764 GGATACTAAGATACCAAGGTTTCTTGT 58.734 37.037 25.52 22.27 46.65 3.16
4518 5271 5.941788 AGATACCAAGGTTTCTTGTTGAGT 58.058 37.500 6.41 0.00 46.65 3.41
4519 5272 5.765182 AGATACCAAGGTTTCTTGTTGAGTG 59.235 40.000 6.41 0.00 46.65 3.51
4528 5281 5.461526 GTTTCTTGTTGAGTGCCTTATTCC 58.538 41.667 0.00 0.00 0.00 3.01
4567 5320 1.826024 AGCTTACATGCTCCCGGAG 59.174 57.895 10.41 10.41 39.34 4.63
4568 5321 0.687757 AGCTTACATGCTCCCGGAGA 60.688 55.000 19.33 3.89 39.34 3.71
4575 5328 1.135094 ATGCTCCCGGAGATGAACAT 58.865 50.000 19.33 8.50 0.00 2.71
4584 5338 4.887071 CCCGGAGATGAACATTAAAATCCA 59.113 41.667 0.73 0.00 0.00 3.41
4658 5413 5.211266 TGATTATTTTTCTACACGCGTGG 57.789 39.130 39.21 24.50 34.19 4.94
4737 5494 5.495640 TCCAAAATGCTTCCAAAAACACTT 58.504 33.333 0.00 0.00 0.00 3.16
4738 5495 5.584251 TCCAAAATGCTTCCAAAAACACTTC 59.416 36.000 0.00 0.00 0.00 3.01
4744 5501 8.785329 AATGCTTCCAAAAACACTTCTTTTTA 57.215 26.923 0.00 0.00 32.66 1.52
4777 6339 3.383620 TGTTATTTTTGCCAGCACCTG 57.616 42.857 0.00 0.00 0.00 4.00
4813 6375 3.307512 TCATCATGAAAATTTGCATGCGC 59.692 39.130 27.98 0.00 41.18 6.09
4908 6473 2.439409 TGTTCATCCAAGAGCATGTGG 58.561 47.619 0.00 0.00 36.13 4.17
4926 6491 0.461961 GGGCTCGAGCTCACATACTT 59.538 55.000 34.46 0.00 42.27 2.24
4972 6537 3.598019 ATATTGTGCACAAAGGCCAAG 57.402 42.857 34.06 0.00 39.55 3.61
5016 6581 4.438148 TCGTGAATTTCTAATGATCGCCA 58.562 39.130 0.00 0.00 0.00 5.69
5080 6646 3.003793 GGAGAGATAAAGCGGGCAAAATC 59.996 47.826 0.00 0.00 0.00 2.17
5168 6735 8.922676 TCTCGAAATTCCGCTATGTTTATTATC 58.077 33.333 0.00 0.00 0.00 1.75
5169 6736 8.827177 TCGAAATTCCGCTATGTTTATTATCT 57.173 30.769 0.00 0.00 0.00 1.98
5171 6738 8.495949 CGAAATTCCGCTATGTTTATTATCTGT 58.504 33.333 0.00 0.00 0.00 3.41
5172 6739 9.599322 GAAATTCCGCTATGTTTATTATCTGTG 57.401 33.333 0.00 0.00 0.00 3.66
5173 6740 8.677148 AATTCCGCTATGTTTATTATCTGTGT 57.323 30.769 0.00 0.00 0.00 3.72
5174 6741 7.477144 TTCCGCTATGTTTATTATCTGTGTG 57.523 36.000 0.00 0.00 0.00 3.82
5175 6742 6.811954 TCCGCTATGTTTATTATCTGTGTGA 58.188 36.000 0.00 0.00 0.00 3.58
5176 6743 7.441836 TCCGCTATGTTTATTATCTGTGTGAT 58.558 34.615 0.00 0.00 39.11 3.06
5184 7704 9.154847 TGTTTATTATCTGTGTGATGTTCTCAG 57.845 33.333 0.00 0.00 36.65 3.35
5188 7708 8.659925 ATTATCTGTGTGATGTTCTCAGAATC 57.340 34.615 0.00 0.00 38.38 2.52
5206 7726 7.134815 TCAGAATCAAGCTTTCTTTCGAAAAG 58.865 34.615 12.41 7.82 38.58 2.27
5219 7739 2.297701 TCGAAAAGCCAAAGACAAGCT 58.702 42.857 0.00 0.00 38.88 3.74
5262 9088 0.951558 TCGAGAGCAAAGCCCAAAAC 59.048 50.000 0.00 0.00 0.00 2.43
5303 9129 2.579410 AGGGTTGTATGGGTGTGTTC 57.421 50.000 0.00 0.00 0.00 3.18
5334 9162 7.221645 GGTAGCAGTATTTAACCTACGAACTTC 59.778 40.741 0.00 0.00 31.49 3.01
5351 9179 7.584987 ACGAACTTCTTGGTCATGATAAAAAG 58.415 34.615 0.00 3.14 31.33 2.27
5419 9247 6.032717 GCTCAATGACCTTTCTTGCTAATTC 58.967 40.000 0.00 0.00 0.00 2.17
5427 9255 6.012745 ACCTTTCTTGCTAATTCTGACCAAT 58.987 36.000 0.00 0.00 0.00 3.16
5459 9287 1.532007 CTACGAGCTAACCTCTAGGCG 59.468 57.143 0.00 0.00 38.49 5.52
5470 9298 0.739561 CTCTAGGCGTCGTTTAGGCT 59.260 55.000 0.00 0.00 45.47 4.58
5471 9299 0.454600 TCTAGGCGTCGTTTAGGCTG 59.545 55.000 0.00 0.00 43.34 4.85
5472 9300 0.527817 CTAGGCGTCGTTTAGGCTGG 60.528 60.000 0.00 0.00 43.34 4.85
5473 9301 1.252904 TAGGCGTCGTTTAGGCTGGT 61.253 55.000 0.00 0.00 43.34 4.00
5474 9302 2.098831 GGCGTCGTTTAGGCTGGTC 61.099 63.158 0.00 0.00 39.02 4.02
5475 9303 1.373748 GCGTCGTTTAGGCTGGTCA 60.374 57.895 0.00 0.00 36.05 4.02
5476 9304 0.739813 GCGTCGTTTAGGCTGGTCAT 60.740 55.000 0.00 0.00 36.05 3.06
5477 9305 1.470285 GCGTCGTTTAGGCTGGTCATA 60.470 52.381 0.00 0.00 36.05 2.15
5478 9306 2.460918 CGTCGTTTAGGCTGGTCATAG 58.539 52.381 0.00 0.00 0.00 2.23
5479 9307 2.159282 CGTCGTTTAGGCTGGTCATAGT 60.159 50.000 0.00 0.00 0.00 2.12
5480 9308 3.187700 GTCGTTTAGGCTGGTCATAGTG 58.812 50.000 0.00 0.00 0.00 2.74
5481 9309 3.093814 TCGTTTAGGCTGGTCATAGTGA 58.906 45.455 0.00 0.00 0.00 3.41
5482 9310 3.512329 TCGTTTAGGCTGGTCATAGTGAA 59.488 43.478 0.00 0.00 0.00 3.18
5483 9311 4.020928 TCGTTTAGGCTGGTCATAGTGAAA 60.021 41.667 0.00 0.00 0.00 2.69
5484 9312 4.330074 CGTTTAGGCTGGTCATAGTGAAAG 59.670 45.833 0.00 0.00 0.00 2.62
5485 9313 5.246307 GTTTAGGCTGGTCATAGTGAAAGT 58.754 41.667 0.00 0.00 0.00 2.66
5486 9314 6.403878 GTTTAGGCTGGTCATAGTGAAAGTA 58.596 40.000 0.00 0.00 0.00 2.24
5487 9315 6.614694 TTAGGCTGGTCATAGTGAAAGTAA 57.385 37.500 0.00 0.00 0.00 2.24
5488 9316 4.833390 AGGCTGGTCATAGTGAAAGTAAC 58.167 43.478 0.00 0.00 0.00 2.50
5489 9317 4.532521 AGGCTGGTCATAGTGAAAGTAACT 59.467 41.667 0.00 0.00 0.00 2.24
5490 9318 5.013183 AGGCTGGTCATAGTGAAAGTAACTT 59.987 40.000 0.00 0.00 0.00 2.66
5491 9319 6.212791 AGGCTGGTCATAGTGAAAGTAACTTA 59.787 38.462 0.00 0.00 0.00 2.24
5492 9320 6.535508 GGCTGGTCATAGTGAAAGTAACTTAG 59.464 42.308 0.00 0.00 0.00 2.18
5493 9321 6.036191 GCTGGTCATAGTGAAAGTAACTTAGC 59.964 42.308 0.00 0.00 0.00 3.09
5494 9322 6.999950 TGGTCATAGTGAAAGTAACTTAGCA 58.000 36.000 0.00 0.00 0.00 3.49
5495 9323 7.446769 TGGTCATAGTGAAAGTAACTTAGCAA 58.553 34.615 0.00 0.00 0.00 3.91
5496 9324 7.602644 TGGTCATAGTGAAAGTAACTTAGCAAG 59.397 37.037 0.00 0.00 0.00 4.01
5497 9325 7.603024 GGTCATAGTGAAAGTAACTTAGCAAGT 59.397 37.037 0.00 0.00 45.46 3.16
5498 9326 9.635520 GTCATAGTGAAAGTAACTTAGCAAGTA 57.364 33.333 2.60 0.00 41.91 2.24
5501 9329 9.991906 ATAGTGAAAGTAACTTAGCAAGTAACA 57.008 29.630 2.60 0.00 41.91 2.41
5502 9330 8.904099 AGTGAAAGTAACTTAGCAAGTAACAT 57.096 30.769 2.60 0.00 41.91 2.71
5503 9331 9.991906 AGTGAAAGTAACTTAGCAAGTAACATA 57.008 29.630 2.60 0.00 41.91 2.29
5508 9336 9.550406 AAGTAACTTAGCAAGTAACATAACACA 57.450 29.630 2.60 0.00 41.91 3.72
5509 9337 8.985805 AGTAACTTAGCAAGTAACATAACACAC 58.014 33.333 2.60 0.00 41.91 3.82
5510 9338 6.796705 ACTTAGCAAGTAACATAACACACC 57.203 37.500 0.44 0.00 40.69 4.16
5511 9339 6.531021 ACTTAGCAAGTAACATAACACACCT 58.469 36.000 0.44 0.00 40.69 4.00
5512 9340 6.649557 ACTTAGCAAGTAACATAACACACCTC 59.350 38.462 0.44 0.00 40.69 3.85
5513 9341 4.968259 AGCAAGTAACATAACACACCTCA 58.032 39.130 0.00 0.00 0.00 3.86
5514 9342 5.373222 AGCAAGTAACATAACACACCTCAA 58.627 37.500 0.00 0.00 0.00 3.02
5515 9343 5.470098 AGCAAGTAACATAACACACCTCAAG 59.530 40.000 0.00 0.00 0.00 3.02
5516 9344 5.468746 GCAAGTAACATAACACACCTCAAGA 59.531 40.000 0.00 0.00 0.00 3.02
5517 9345 6.017440 GCAAGTAACATAACACACCTCAAGAA 60.017 38.462 0.00 0.00 0.00 2.52
5518 9346 7.468084 GCAAGTAACATAACACACCTCAAGAAA 60.468 37.037 0.00 0.00 0.00 2.52
5519 9347 8.402472 CAAGTAACATAACACACCTCAAGAAAA 58.598 33.333 0.00 0.00 0.00 2.29
5520 9348 8.514330 AGTAACATAACACACCTCAAGAAAAA 57.486 30.769 0.00 0.00 0.00 1.94
5521 9349 9.131791 AGTAACATAACACACCTCAAGAAAAAT 57.868 29.630 0.00 0.00 0.00 1.82
5522 9350 9.744468 GTAACATAACACACCTCAAGAAAAATT 57.256 29.630 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 3.296709 CTAGTCAACCAGGCCGCGT 62.297 63.158 4.92 0.00 0.00 6.01
24 25 1.446016 AGAAGGCCCAACCAACTAGT 58.554 50.000 0.00 0.00 43.14 2.57
29 30 2.470057 AGAAAAGAAGGCCCAACCAA 57.530 45.000 0.00 0.00 43.14 3.67
53 60 5.192327 ACAGAAGGCAGAAACAGAAAATG 57.808 39.130 0.00 0.00 0.00 2.32
54 61 5.127682 ACAACAGAAGGCAGAAACAGAAAAT 59.872 36.000 0.00 0.00 0.00 1.82
140 151 9.855361 GAAATGTTCATCTAGTCACGAATATTG 57.145 33.333 0.00 0.00 31.96 1.90
148 159 4.843728 TGGGGAAATGTTCATCTAGTCAC 58.156 43.478 0.00 0.00 0.00 3.67
211 223 2.706339 AACAACTTTGCAAATGGGCA 57.294 40.000 13.23 0.00 43.19 5.36
297 317 5.073965 AGTGGACCAGGGTTTGAAAATAGTA 59.926 40.000 0.00 0.00 0.00 1.82
457 505 4.753107 CCATGATTTCCTTGCATATTTGGC 59.247 41.667 0.00 0.00 0.00 4.52
607 670 1.764054 CTCTCCTCTTCCCGGCCAT 60.764 63.158 2.24 0.00 0.00 4.40
612 675 2.122167 CGACCCTCTCCTCTTCCCG 61.122 68.421 0.00 0.00 0.00 5.14
643 707 1.676014 GGAGACCTAGTTGCGTGCATT 60.676 52.381 0.00 0.00 0.00 3.56
649 713 1.080093 TTGCGGAGACCTAGTTGCG 60.080 57.895 0.00 0.00 0.00 4.85
670 734 2.822764 CGTATAAAAGGAAGCCGCTCT 58.177 47.619 0.00 0.00 0.00 4.09
675 739 2.750712 TGTTGGCGTATAAAAGGAAGCC 59.249 45.455 0.00 0.00 44.38 4.35
758 822 6.712241 TTTCAATTGCAACGTTCTCAAAAA 57.288 29.167 14.18 9.15 0.00 1.94
759 823 6.712241 TTTTCAATTGCAACGTTCTCAAAA 57.288 29.167 14.18 0.00 0.00 2.44
760 824 6.900568 ATTTTCAATTGCAACGTTCTCAAA 57.099 29.167 14.18 0.00 0.00 2.69
761 825 6.900568 AATTTTCAATTGCAACGTTCTCAA 57.099 29.167 0.00 12.99 0.00 3.02
762 826 6.900568 AAATTTTCAATTGCAACGTTCTCA 57.099 29.167 0.00 0.00 0.00 3.27
763 827 8.162245 GGATAAATTTTCAATTGCAACGTTCTC 58.838 33.333 0.00 0.00 0.00 2.87
764 828 7.655328 TGGATAAATTTTCAATTGCAACGTTCT 59.345 29.630 0.00 0.00 0.00 3.01
765 829 7.791949 TGGATAAATTTTCAATTGCAACGTTC 58.208 30.769 0.00 0.00 0.00 3.95
766 830 7.721286 TGGATAAATTTTCAATTGCAACGTT 57.279 28.000 0.00 0.00 0.00 3.99
767 831 7.721286 TTGGATAAATTTTCAATTGCAACGT 57.279 28.000 0.00 0.00 0.00 3.99
768 832 7.745594 CCTTTGGATAAATTTTCAATTGCAACG 59.254 33.333 0.00 0.00 0.00 4.10
769 833 7.538334 GCCTTTGGATAAATTTTCAATTGCAAC 59.462 33.333 0.00 0.00 0.00 4.17
770 834 7.309073 GGCCTTTGGATAAATTTTCAATTGCAA 60.309 33.333 0.00 0.00 0.00 4.08
771 835 6.150809 GGCCTTTGGATAAATTTTCAATTGCA 59.849 34.615 0.00 0.00 0.00 4.08
772 836 6.150809 TGGCCTTTGGATAAATTTTCAATTGC 59.849 34.615 3.32 5.49 0.00 3.56
773 837 7.684937 TGGCCTTTGGATAAATTTTCAATTG 57.315 32.000 3.32 0.00 0.00 2.32
774 838 7.394077 CCTTGGCCTTTGGATAAATTTTCAATT 59.606 33.333 3.32 0.00 0.00 2.32
779 843 4.588899 GCCTTGGCCTTTGGATAAATTTT 58.411 39.130 3.32 0.00 0.00 1.82
825 890 1.003839 CTCGGGCTGGTTTGCTGTA 60.004 57.895 0.00 0.00 0.00 2.74
883 948 4.334481 CCCATTGTTAGATTCACGTTACCC 59.666 45.833 0.00 0.00 0.00 3.69
886 951 4.938832 CACCCCATTGTTAGATTCACGTTA 59.061 41.667 0.00 0.00 0.00 3.18
901 966 5.732331 TCTCCTCATTTATTCACCCCATT 57.268 39.130 0.00 0.00 0.00 3.16
952 1025 1.672356 CTCACGGCCCCTCTGTTTG 60.672 63.158 0.00 0.00 30.14 2.93
1422 2065 1.270625 TGGCTAAACCTCACCAACTCG 60.271 52.381 0.00 0.00 40.22 4.18
1442 2085 7.761249 GCACAGCCAAATCAAAAACTTATATCT 59.239 33.333 0.00 0.00 0.00 1.98
1581 2224 3.562108 TCCTTGTAAGAGGAGAAGGGT 57.438 47.619 0.00 0.00 40.87 4.34
1619 2262 7.601886 AGGAGAAAGCATGAATATGAGTATTCG 59.398 37.037 0.00 0.00 45.99 3.34
1625 2268 8.557864 CAGTTTAGGAGAAAGCATGAATATGAG 58.442 37.037 0.00 0.00 36.36 2.90
1665 2308 3.368948 GGCTCAGTTTTGTTTCCAAACCA 60.369 43.478 0.00 0.00 40.19 3.67
1741 2384 5.183713 TGGAAACCTATTTGCATTGTCTCAG 59.816 40.000 0.00 0.00 40.80 3.35
1825 2471 7.104290 GGAATTATATTTAGGAACGGAGGGAG 58.896 42.308 0.00 0.00 0.00 4.30
1826 2472 6.559539 TGGAATTATATTTAGGAACGGAGGGA 59.440 38.462 0.00 0.00 0.00 4.20
1827 2473 6.775708 TGGAATTATATTTAGGAACGGAGGG 58.224 40.000 0.00 0.00 0.00 4.30
1840 2486 9.865321 GCTGATGCAACAATATGGAATTATATT 57.135 29.630 0.00 0.00 39.41 1.28
1859 2505 1.656652 ACATACTTCCGTGCTGATGC 58.343 50.000 0.00 0.00 40.20 3.91
1860 2506 4.045104 GACTACATACTTCCGTGCTGATG 58.955 47.826 0.00 0.00 0.00 3.07
1861 2507 3.068307 GGACTACATACTTCCGTGCTGAT 59.932 47.826 0.00 0.00 0.00 2.90
1862 2508 2.426024 GGACTACATACTTCCGTGCTGA 59.574 50.000 0.00 0.00 0.00 4.26
1863 2509 2.165641 TGGACTACATACTTCCGTGCTG 59.834 50.000 0.00 0.00 31.38 4.41
1864 2510 2.453521 TGGACTACATACTTCCGTGCT 58.546 47.619 0.00 0.00 31.38 4.40
1865 2511 2.953466 TGGACTACATACTTCCGTGC 57.047 50.000 0.00 0.00 31.38 5.34
1866 2512 5.926542 CCAATATGGACTACATACTTCCGTG 59.073 44.000 0.00 0.00 44.41 4.94
1867 2513 5.836898 TCCAATATGGACTACATACTTCCGT 59.163 40.000 0.00 0.00 42.67 4.69
1868 2514 6.340962 TCCAATATGGACTACATACTTCCG 57.659 41.667 0.00 0.00 42.67 4.30
1898 2544 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
1899 2545 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
1900 2546 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
1901 2547 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
1902 2548 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
1903 2549 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
1904 2550 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
1905 2551 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
1906 2552 6.210185 GCTACTCCCTCCGTTCCTAAATATAA 59.790 42.308 0.00 0.00 0.00 0.98
1907 2553 5.713861 GCTACTCCCTCCGTTCCTAAATATA 59.286 44.000 0.00 0.00 0.00 0.86
1908 2554 4.527427 GCTACTCCCTCCGTTCCTAAATAT 59.473 45.833 0.00 0.00 0.00 1.28
1909 2555 3.893813 GCTACTCCCTCCGTTCCTAAATA 59.106 47.826 0.00 0.00 0.00 1.40
1910 2556 2.699321 GCTACTCCCTCCGTTCCTAAAT 59.301 50.000 0.00 0.00 0.00 1.40
1911 2557 2.105766 GCTACTCCCTCCGTTCCTAAA 58.894 52.381 0.00 0.00 0.00 1.85
1912 2558 1.006281 TGCTACTCCCTCCGTTCCTAA 59.994 52.381 0.00 0.00 0.00 2.69
1913 2559 0.627451 TGCTACTCCCTCCGTTCCTA 59.373 55.000 0.00 0.00 0.00 2.94
1914 2560 0.252103 TTGCTACTCCCTCCGTTCCT 60.252 55.000 0.00 0.00 0.00 3.36
1915 2561 0.108281 GTTGCTACTCCCTCCGTTCC 60.108 60.000 0.00 0.00 0.00 3.62
1916 2562 0.458025 CGTTGCTACTCCCTCCGTTC 60.458 60.000 0.00 0.00 0.00 3.95
1917 2563 0.896940 TCGTTGCTACTCCCTCCGTT 60.897 55.000 0.00 0.00 0.00 4.44
1918 2564 1.303888 TCGTTGCTACTCCCTCCGT 60.304 57.895 0.00 0.00 0.00 4.69
1919 2565 1.139095 GTCGTTGCTACTCCCTCCG 59.861 63.158 0.00 0.00 0.00 4.63
1920 2566 0.173708 CTGTCGTTGCTACTCCCTCC 59.826 60.000 0.00 0.00 0.00 4.30
1921 2567 0.173708 CCTGTCGTTGCTACTCCCTC 59.826 60.000 0.00 0.00 0.00 4.30
1922 2568 1.258445 CCCTGTCGTTGCTACTCCCT 61.258 60.000 0.00 0.00 0.00 4.20
1923 2569 1.218316 CCCTGTCGTTGCTACTCCC 59.782 63.158 0.00 0.00 0.00 4.30
1924 2570 1.218316 CCCCTGTCGTTGCTACTCC 59.782 63.158 0.00 0.00 0.00 3.85
1925 2571 1.448013 GCCCCTGTCGTTGCTACTC 60.448 63.158 0.00 0.00 0.00 2.59
1960 2606 3.801114 AAGCTTCCTGTTGTTTGGAAC 57.199 42.857 0.00 0.00 37.42 3.62
2026 2672 5.805728 AGGAATCCAGTAAAACTGTGTAGG 58.194 41.667 0.61 0.00 44.50 3.18
2060 2706 1.831106 TGAAGGCTGCGATTTCTCCTA 59.169 47.619 10.18 0.00 0.00 2.94
2178 2825 3.551496 TTGGGAGCCAGGCTGTTCG 62.551 63.158 22.26 0.00 39.88 3.95
2182 2829 1.975407 CAAGTTGGGAGCCAGGCTG 60.975 63.158 22.26 7.75 39.88 4.85
2261 2908 2.357569 GGGACGGAGGGAGTACTAGAAA 60.358 54.545 0.00 0.00 0.00 2.52
2263 2910 0.842635 GGGACGGAGGGAGTACTAGA 59.157 60.000 0.00 0.00 0.00 2.43
2265 2912 1.002069 TTGGGACGGAGGGAGTACTA 58.998 55.000 0.00 0.00 0.00 1.82
2266 2913 0.115745 TTTGGGACGGAGGGAGTACT 59.884 55.000 0.00 0.00 0.00 2.73
2267 2914 0.978907 TTTTGGGACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
2268 2915 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
2269 2916 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
2270 2917 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
2271 2918 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
2272 2919 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
2273 2920 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
2274 2921 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
2275 2922 3.325425 TGAGACACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
2276 2923 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
2277 2924 4.755123 AGTTGAGACACTTATTTTGGGACG 59.245 41.667 0.00 0.00 0.00 4.79
2278 2925 6.635030 AAGTTGAGACACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
2279 2926 6.605594 ACAAAGTTGAGACACTTATTTTGGGA 59.394 34.615 0.00 0.00 35.87 4.37
2280 2927 6.805713 ACAAAGTTGAGACACTTATTTTGGG 58.194 36.000 0.00 0.00 35.87 4.12
2281 2928 8.621286 AGTACAAAGTTGAGACACTTATTTTGG 58.379 33.333 0.00 0.00 35.87 3.28
2286 2933 9.694137 GAGTTAGTACAAAGTTGAGACACTTAT 57.306 33.333 0.00 0.00 35.87 1.73
2287 2934 8.910944 AGAGTTAGTACAAAGTTGAGACACTTA 58.089 33.333 0.00 0.00 35.87 2.24
2288 2935 7.783042 AGAGTTAGTACAAAGTTGAGACACTT 58.217 34.615 0.00 0.00 38.74 3.16
2289 2936 7.349412 AGAGTTAGTACAAAGTTGAGACACT 57.651 36.000 0.00 0.00 0.00 3.55
2290 2937 8.351461 ACTAGAGTTAGTACAAAGTTGAGACAC 58.649 37.037 0.00 0.00 38.35 3.67
2291 2938 8.461249 ACTAGAGTTAGTACAAAGTTGAGACA 57.539 34.615 0.00 0.00 38.35 3.41
2316 2963 7.437267 GTGTCTCAAGCTTAGTACAACTTTGTA 59.563 37.037 0.00 0.00 42.35 2.41
2317 2964 6.258068 GTGTCTCAAGCTTAGTACAACTTTGT 59.742 38.462 0.00 0.00 44.86 2.83
2318 2965 6.480320 AGTGTCTCAAGCTTAGTACAACTTTG 59.520 38.462 0.00 0.00 0.00 2.77
2319 2966 6.583562 AGTGTCTCAAGCTTAGTACAACTTT 58.416 36.000 0.00 0.00 0.00 2.66
2320 2967 6.163135 AGTGTCTCAAGCTTAGTACAACTT 57.837 37.500 0.00 0.00 0.00 2.66
2321 2968 5.793030 AGTGTCTCAAGCTTAGTACAACT 57.207 39.130 0.00 0.00 0.00 3.16
2322 2969 8.535690 AATAAGTGTCTCAAGCTTAGTACAAC 57.464 34.615 0.00 0.00 0.00 3.32
2323 2970 9.555727 AAAATAAGTGTCTCAAGCTTAGTACAA 57.444 29.630 0.00 0.00 0.00 2.41
2324 2971 8.988934 CAAAATAAGTGTCTCAAGCTTAGTACA 58.011 33.333 0.00 0.36 0.00 2.90
2325 2972 8.443937 CCAAAATAAGTGTCTCAAGCTTAGTAC 58.556 37.037 0.00 0.00 0.00 2.73
2326 2973 7.606456 CCCAAAATAAGTGTCTCAAGCTTAGTA 59.394 37.037 0.00 0.00 0.00 1.82
2327 2974 6.431234 CCCAAAATAAGTGTCTCAAGCTTAGT 59.569 38.462 0.00 0.00 0.00 2.24
2328 2975 6.655003 TCCCAAAATAAGTGTCTCAAGCTTAG 59.345 38.462 0.00 0.00 0.00 2.18
2329 2976 6.539173 TCCCAAAATAAGTGTCTCAAGCTTA 58.461 36.000 0.00 0.00 0.00 3.09
2330 2977 5.385198 TCCCAAAATAAGTGTCTCAAGCTT 58.615 37.500 0.00 0.00 0.00 3.74
2331 2978 4.985538 TCCCAAAATAAGTGTCTCAAGCT 58.014 39.130 0.00 0.00 0.00 3.74
2332 2979 5.393461 CCATCCCAAAATAAGTGTCTCAAGC 60.393 44.000 0.00 0.00 0.00 4.01
2333 2980 5.945784 TCCATCCCAAAATAAGTGTCTCAAG 59.054 40.000 0.00 0.00 0.00 3.02
2334 2981 5.886609 TCCATCCCAAAATAAGTGTCTCAA 58.113 37.500 0.00 0.00 0.00 3.02
2335 2982 5.500234 CTCCATCCCAAAATAAGTGTCTCA 58.500 41.667 0.00 0.00 0.00 3.27
2336 2983 4.884164 CCTCCATCCCAAAATAAGTGTCTC 59.116 45.833 0.00 0.00 0.00 3.36
2337 2984 4.325344 CCCTCCATCCCAAAATAAGTGTCT 60.325 45.833 0.00 0.00 0.00 3.41
2338 2985 3.954258 CCCTCCATCCCAAAATAAGTGTC 59.046 47.826 0.00 0.00 0.00 3.67
2339 2986 3.596046 TCCCTCCATCCCAAAATAAGTGT 59.404 43.478 0.00 0.00 0.00 3.55
2340 2987 4.210331 CTCCCTCCATCCCAAAATAAGTG 58.790 47.826 0.00 0.00 0.00 3.16
2341 2988 3.858638 ACTCCCTCCATCCCAAAATAAGT 59.141 43.478 0.00 0.00 0.00 2.24
2342 2989 4.526438 ACTCCCTCCATCCCAAAATAAG 57.474 45.455 0.00 0.00 0.00 1.73
2343 2990 5.043762 AGTACTCCCTCCATCCCAAAATAA 58.956 41.667 0.00 0.00 0.00 1.40
2344 2991 4.641868 AGTACTCCCTCCATCCCAAAATA 58.358 43.478 0.00 0.00 0.00 1.40
2345 2992 3.474920 AGTACTCCCTCCATCCCAAAAT 58.525 45.455 0.00 0.00 0.00 1.82
2346 2993 2.929301 AGTACTCCCTCCATCCCAAAA 58.071 47.619 0.00 0.00 0.00 2.44
2347 2994 2.661176 AGTACTCCCTCCATCCCAAA 57.339 50.000 0.00 0.00 0.00 3.28
2348 2995 3.788116 TTAGTACTCCCTCCATCCCAA 57.212 47.619 0.00 0.00 0.00 4.12
2349 2996 4.295905 AATTAGTACTCCCTCCATCCCA 57.704 45.455 0.00 0.00 0.00 4.37
2350 2997 5.152934 TGTAATTAGTACTCCCTCCATCCC 58.847 45.833 0.00 0.00 33.46 3.85
2351 2998 6.702329 CATGTAATTAGTACTCCCTCCATCC 58.298 44.000 0.00 0.00 33.46 3.51
2352 2999 6.166982 GCATGTAATTAGTACTCCCTCCATC 58.833 44.000 0.00 0.00 33.46 3.51
2353 3000 5.606749 TGCATGTAATTAGTACTCCCTCCAT 59.393 40.000 0.00 0.00 33.46 3.41
2354 3001 4.966168 TGCATGTAATTAGTACTCCCTCCA 59.034 41.667 0.00 0.00 33.46 3.86
2355 3002 5.546621 TGCATGTAATTAGTACTCCCTCC 57.453 43.478 0.00 0.00 33.46 4.30
2356 3003 6.759272 TGATGCATGTAATTAGTACTCCCTC 58.241 40.000 2.46 0.00 33.46 4.30
2357 3004 6.747414 TGATGCATGTAATTAGTACTCCCT 57.253 37.500 2.46 0.00 33.46 4.20
2358 3005 7.986085 AATGATGCATGTAATTAGTACTCCC 57.014 36.000 2.46 0.00 33.46 4.30
2427 3074 4.380843 TTGAATGAGAAAGGGCTGGTTA 57.619 40.909 0.00 0.00 0.00 2.85
2428 3075 2.978156 TGAATGAGAAAGGGCTGGTT 57.022 45.000 0.00 0.00 0.00 3.67
2429 3076 2.978156 TTGAATGAGAAAGGGCTGGT 57.022 45.000 0.00 0.00 0.00 4.00
2430 3077 4.706476 TGTAATTGAATGAGAAAGGGCTGG 59.294 41.667 0.00 0.00 0.00 4.85
2431 3078 5.902613 TGTAATTGAATGAGAAAGGGCTG 57.097 39.130 0.00 0.00 0.00 4.85
2432 3079 5.163478 GCATGTAATTGAATGAGAAAGGGCT 60.163 40.000 6.41 0.00 0.00 5.19
2433 3080 5.045872 GCATGTAATTGAATGAGAAAGGGC 58.954 41.667 6.41 0.00 0.00 5.19
2434 3081 6.211587 TGCATGTAATTGAATGAGAAAGGG 57.788 37.500 6.41 0.00 0.00 3.95
2435 3082 7.485810 TGATGCATGTAATTGAATGAGAAAGG 58.514 34.615 2.46 0.00 0.00 3.11
2436 3083 9.529325 AATGATGCATGTAATTGAATGAGAAAG 57.471 29.630 2.46 0.00 0.00 2.62
2442 3089 9.830294 ACGTATAATGATGCATGTAATTGAATG 57.170 29.630 2.46 2.97 0.00 2.67
2450 3097 9.974980 TCTAGAAAACGTATAATGATGCATGTA 57.025 29.630 2.46 0.00 0.00 2.29
2451 3098 8.887036 TCTAGAAAACGTATAATGATGCATGT 57.113 30.769 2.46 0.00 0.00 3.21
2466 3113 9.081997 GCAATCCTATGATCTATCTAGAAAACG 57.918 37.037 0.00 0.00 35.69 3.60
2469 3116 8.256605 GCAGCAATCCTATGATCTATCTAGAAA 58.743 37.037 0.00 0.00 35.69 2.52
2470 3117 7.398332 TGCAGCAATCCTATGATCTATCTAGAA 59.602 37.037 0.00 0.00 35.69 2.10
2471 3118 6.894103 TGCAGCAATCCTATGATCTATCTAGA 59.106 38.462 0.00 0.00 36.65 2.43
2472 3119 7.110043 TGCAGCAATCCTATGATCTATCTAG 57.890 40.000 0.00 0.00 0.00 2.43
2473 3120 6.666980 ACTGCAGCAATCCTATGATCTATCTA 59.333 38.462 15.27 0.00 0.00 1.98
2474 3121 5.484644 ACTGCAGCAATCCTATGATCTATCT 59.515 40.000 15.27 0.00 0.00 1.98
2475 3122 5.732633 ACTGCAGCAATCCTATGATCTATC 58.267 41.667 15.27 0.00 0.00 2.08
2476 3123 5.758790 ACTGCAGCAATCCTATGATCTAT 57.241 39.130 15.27 0.00 0.00 1.98
2477 3124 5.512060 GGAACTGCAGCAATCCTATGATCTA 60.512 44.000 20.78 0.00 0.00 1.98
2478 3125 4.387598 GAACTGCAGCAATCCTATGATCT 58.612 43.478 15.27 0.00 0.00 2.75
2479 3126 3.501445 GGAACTGCAGCAATCCTATGATC 59.499 47.826 20.78 0.00 0.00 2.92
2480 3127 3.117776 TGGAACTGCAGCAATCCTATGAT 60.118 43.478 25.47 0.00 33.02 2.45
2481 3128 2.239402 TGGAACTGCAGCAATCCTATGA 59.761 45.455 25.47 10.06 33.02 2.15
2482 3129 2.646930 TGGAACTGCAGCAATCCTATG 58.353 47.619 25.47 1.84 33.02 2.23
2483 3130 3.019564 GTTGGAACTGCAGCAATCCTAT 58.980 45.455 25.47 0.00 33.02 2.57
2484 3131 2.436417 GTTGGAACTGCAGCAATCCTA 58.564 47.619 25.47 19.02 33.02 2.94
2485 3132 1.251251 GTTGGAACTGCAGCAATCCT 58.749 50.000 25.47 1.35 33.02 3.24
2486 3133 0.244721 GGTTGGAACTGCAGCAATCC 59.755 55.000 21.10 21.10 0.00 3.01
2487 3134 0.961019 TGGTTGGAACTGCAGCAATC 59.039 50.000 15.27 11.11 0.00 2.67
2488 3135 1.636148 ATGGTTGGAACTGCAGCAAT 58.364 45.000 15.27 0.00 0.00 3.56
2489 3136 2.284754 TATGGTTGGAACTGCAGCAA 57.715 45.000 15.27 7.43 0.00 3.91
2490 3137 1.885887 GTTATGGTTGGAACTGCAGCA 59.114 47.619 15.27 0.06 0.00 4.41
2491 3138 1.202348 GGTTATGGTTGGAACTGCAGC 59.798 52.381 15.27 0.00 0.00 5.25
2492 3139 2.489329 CTGGTTATGGTTGGAACTGCAG 59.511 50.000 13.48 13.48 0.00 4.41
2493 3140 2.513753 CTGGTTATGGTTGGAACTGCA 58.486 47.619 0.00 0.00 0.00 4.41
2494 3141 1.202348 GCTGGTTATGGTTGGAACTGC 59.798 52.381 0.00 0.00 0.00 4.40
2495 3142 1.818674 GGCTGGTTATGGTTGGAACTG 59.181 52.381 0.00 0.00 0.00 3.16
2496 3143 1.272480 GGGCTGGTTATGGTTGGAACT 60.272 52.381 0.00 0.00 0.00 3.01
2497 3144 1.182667 GGGCTGGTTATGGTTGGAAC 58.817 55.000 0.00 0.00 0.00 3.62
2498 3145 1.080638 AGGGCTGGTTATGGTTGGAA 58.919 50.000 0.00 0.00 0.00 3.53
2499 3146 1.080638 AAGGGCTGGTTATGGTTGGA 58.919 50.000 0.00 0.00 0.00 3.53
2500 3147 1.824852 GAAAGGGCTGGTTATGGTTGG 59.175 52.381 0.00 0.00 0.00 3.77
2501 3148 2.755103 GAGAAAGGGCTGGTTATGGTTG 59.245 50.000 0.00 0.00 0.00 3.77
2502 3149 2.378547 TGAGAAAGGGCTGGTTATGGTT 59.621 45.455 0.00 0.00 0.00 3.67
2503 3150 1.992557 TGAGAAAGGGCTGGTTATGGT 59.007 47.619 0.00 0.00 0.00 3.55
2504 3151 2.806945 TGAGAAAGGGCTGGTTATGG 57.193 50.000 0.00 0.00 0.00 2.74
2505 3152 4.530875 AGAATGAGAAAGGGCTGGTTATG 58.469 43.478 0.00 0.00 0.00 1.90
2506 3153 4.870021 AGAATGAGAAAGGGCTGGTTAT 57.130 40.909 0.00 0.00 0.00 1.89
2626 3273 1.217882 AATCGTATGCTTACTGGCGC 58.782 50.000 0.00 0.00 34.52 6.53
2642 3289 7.121315 AGCACCTCCTATTTAGTGAAACAAATC 59.879 37.037 0.00 0.00 41.43 2.17
2703 3350 3.451141 TGGGCAATTGAAGTGTTGAAC 57.549 42.857 10.34 0.00 0.00 3.18
2726 3373 1.135575 GTGCTACATCACAAGCCAAGC 60.136 52.381 0.00 0.00 37.97 4.01
2727 3374 2.153645 TGTGCTACATCACAAGCCAAG 58.846 47.619 0.00 0.00 43.27 3.61
2728 3375 2.268762 TGTGCTACATCACAAGCCAA 57.731 45.000 0.00 0.00 43.27 4.52
2755 3402 3.602390 ACACGCACAATTTAGTGTCAC 57.398 42.857 0.00 0.00 43.41 3.67
2756 3403 4.623002 TCTACACGCACAATTTAGTGTCA 58.377 39.130 3.24 0.00 45.31 3.58
2760 3407 4.630069 GGACATCTACACGCACAATTTAGT 59.370 41.667 0.00 0.00 0.00 2.24
2784 3431 1.070914 TGCATGTACCGTGAAAGGTCA 59.929 47.619 0.00 0.00 44.68 4.02
2787 3434 3.243234 TGTTTTGCATGTACCGTGAAAGG 60.243 43.478 0.00 0.00 37.30 3.11
2794 3441 2.465839 CGTTGTTGTTTTGCATGTACCG 59.534 45.455 0.00 0.00 0.00 4.02
2819 3466 1.361668 CTGCGACTATTGCTGCCGTT 61.362 55.000 0.00 0.00 0.00 4.44
2838 3485 8.512956 GGTTTGTTCTTCTAGGTCTATTTTTCC 58.487 37.037 0.00 0.00 0.00 3.13
2841 3488 9.286170 GAAGGTTTGTTCTTCTAGGTCTATTTT 57.714 33.333 0.00 0.00 38.02 1.82
2862 3509 6.522054 TCTTACTTTCGTTTGATCTGAAGGT 58.478 36.000 0.00 2.94 36.19 3.50
2989 3636 4.134563 ACTACCAGAAAACGCTTCACATT 58.865 39.130 1.17 0.00 0.00 2.71
2990 3637 3.740115 ACTACCAGAAAACGCTTCACAT 58.260 40.909 1.17 0.00 0.00 3.21
2996 3643 6.665465 GTTGAATAAACTACCAGAAAACGCT 58.335 36.000 0.00 0.00 35.75 5.07
3010 3657 8.188139 TGGAGTTTTGAGTTGAGTTGAATAAAC 58.812 33.333 0.00 0.00 39.24 2.01
3114 3761 4.566987 ACCTCAGCTTTTAAGTCGGTTAG 58.433 43.478 0.00 0.00 0.00 2.34
3131 3778 4.689612 AGAAGTTCTGTTAGCAACCTCA 57.310 40.909 4.10 0.00 0.00 3.86
3132 3779 7.100409 AGAATAGAAGTTCTGTTAGCAACCTC 58.900 38.462 15.90 1.08 37.08 3.85
3230 3877 6.818142 AGTGCAAGCAAACAAATAGTCTTTTT 59.182 30.769 0.00 0.00 0.00 1.94
3236 3883 5.284079 CAAGAGTGCAAGCAAACAAATAGT 58.716 37.500 0.00 0.00 0.00 2.12
3260 3907 2.975732 TGTCTGATGATGGAGCAGTC 57.024 50.000 0.00 0.00 39.29 3.51
3289 3936 8.281212 AGGACACAGTGAATTAATATTGGAAC 57.719 34.615 7.81 0.00 0.00 3.62
3291 3938 8.328758 AGAAGGACACAGTGAATTAATATTGGA 58.671 33.333 7.81 0.00 0.00 3.53
3307 3954 4.099266 CCAATTGAACCAAAGAAGGACACA 59.901 41.667 7.12 0.00 0.00 3.72
3332 3979 4.058124 GGCTCATTTTGGTTTGAGGTTTC 58.942 43.478 2.48 0.00 39.79 2.78
3416 4063 6.203723 AGTGTTGAACAGAAGATAAGCAAGAC 59.796 38.462 0.00 0.00 0.00 3.01
3470 4125 4.829492 ACCAATGCAGCTATTATCTTTCCC 59.171 41.667 0.00 0.00 0.00 3.97
3489 4144 0.111061 ATGCAAGCTGAGTCCACCAA 59.889 50.000 0.00 0.00 0.00 3.67
3567 4225 4.557205 AGGCGGTAAAATATCGATCTCAC 58.443 43.478 0.00 0.00 33.17 3.51
3583 4241 1.516110 TAGAGGGAGTACTAGGCGGT 58.484 55.000 0.00 0.00 0.00 5.68
3585 4243 3.818180 TCTTTAGAGGGAGTACTAGGCG 58.182 50.000 0.00 0.00 0.00 5.52
3586 4244 6.734502 ATTTCTTTAGAGGGAGTACTAGGC 57.265 41.667 0.00 0.00 0.00 3.93
3611 4269 9.750783 ACTAAAGTAGTGATCTAAACACTCCTA 57.249 33.333 0.00 0.00 45.58 2.94
3612 4270 8.653036 ACTAAAGTAGTGATCTAAACACTCCT 57.347 34.615 0.00 0.00 45.58 3.69
3644 4302 9.892130 CCCTCTGTAAAGAAATATAAGAGTGTT 57.108 33.333 0.00 0.00 0.00 3.32
3645 4303 9.268282 TCCCTCTGTAAAGAAATATAAGAGTGT 57.732 33.333 0.00 0.00 0.00 3.55
3646 4304 9.757227 CTCCCTCTGTAAAGAAATATAAGAGTG 57.243 37.037 0.00 0.00 0.00 3.51
3647 4305 9.495382 ACTCCCTCTGTAAAGAAATATAAGAGT 57.505 33.333 0.00 0.00 0.00 3.24
3650 4308 9.984190 GGTACTCCCTCTGTAAAGAAATATAAG 57.016 37.037 0.00 0.00 0.00 1.73
3651 4309 9.725206 AGGTACTCCCTCTGTAAAGAAATATAA 57.275 33.333 0.00 0.00 40.71 0.98
3652 4310 9.725206 AAGGTACTCCCTCTGTAAAGAAATATA 57.275 33.333 0.00 0.00 45.47 0.86
3653 4311 8.625467 AAGGTACTCCCTCTGTAAAGAAATAT 57.375 34.615 0.00 0.00 45.47 1.28
3654 4312 7.899709 AGAAGGTACTCCCTCTGTAAAGAAATA 59.100 37.037 0.00 0.00 45.47 1.40
3655 4313 6.731448 AGAAGGTACTCCCTCTGTAAAGAAAT 59.269 38.462 0.00 0.00 45.47 2.17
3656 4314 6.082707 AGAAGGTACTCCCTCTGTAAAGAAA 58.917 40.000 0.00 0.00 45.47 2.52
3657 4315 5.652324 AGAAGGTACTCCCTCTGTAAAGAA 58.348 41.667 0.00 0.00 45.47 2.52
3658 4316 5.272405 AGAAGGTACTCCCTCTGTAAAGA 57.728 43.478 0.00 0.00 45.47 2.52
3659 4317 6.189133 AGTAGAAGGTACTCCCTCTGTAAAG 58.811 44.000 0.00 0.00 45.47 1.85
3660 4318 6.150034 AGTAGAAGGTACTCCCTCTGTAAA 57.850 41.667 0.00 0.00 45.47 2.01
3661 4319 5.252397 TGAGTAGAAGGTACTCCCTCTGTAA 59.748 44.000 9.20 0.00 45.47 2.41
3662 4320 4.786994 TGAGTAGAAGGTACTCCCTCTGTA 59.213 45.833 9.20 0.00 45.47 2.74
3663 4321 3.592427 TGAGTAGAAGGTACTCCCTCTGT 59.408 47.826 9.20 0.00 45.47 3.41
3664 4322 4.237976 TGAGTAGAAGGTACTCCCTCTG 57.762 50.000 9.20 0.00 45.47 3.35
3665 4323 4.949966 TTGAGTAGAAGGTACTCCCTCT 57.050 45.455 9.20 0.00 45.47 3.69
3666 4324 5.451354 AGATTGAGTAGAAGGTACTCCCTC 58.549 45.833 9.20 6.43 45.47 4.30
3668 4326 6.342111 CAAAGATTGAGTAGAAGGTACTCCC 58.658 44.000 9.20 0.78 42.32 4.30
3669 4327 5.813157 GCAAAGATTGAGTAGAAGGTACTCC 59.187 44.000 9.20 0.00 42.32 3.85
3670 4328 6.398918 TGCAAAGATTGAGTAGAAGGTACTC 58.601 40.000 5.41 5.41 38.49 2.59
4034 4695 4.638304 TGGAAGAACAAGCAACTAGGTAC 58.362 43.478 0.00 0.00 0.00 3.34
4069 4736 4.201881 CCGCTAGCACAAAAATTACCCTAC 60.202 45.833 16.45 0.00 0.00 3.18
4092 4759 3.334691 TGCAGTATGAGTAAAGCCACAC 58.665 45.455 0.00 0.00 39.69 3.82
4174 4841 5.505654 CCAAGGCCGCACTTGTTATATTTAG 60.506 44.000 15.92 0.00 44.89 1.85
4190 4857 7.530010 CATTCTGAAATATAATACCAAGGCCG 58.470 38.462 0.00 0.00 0.00 6.13
4381 5049 7.285629 TCGATCCAGAACTTCTCACATACTAAT 59.714 37.037 0.00 0.00 0.00 1.73
4382 5050 6.602009 TCGATCCAGAACTTCTCACATACTAA 59.398 38.462 0.00 0.00 0.00 2.24
4392 5060 4.648762 ACATCTGATCGATCCAGAACTTCT 59.351 41.667 22.31 7.34 43.07 2.85
4393 5061 4.942852 ACATCTGATCGATCCAGAACTTC 58.057 43.478 22.31 0.00 43.07 3.01
4441 5194 8.697507 AACATAATCTCCCATTCAATACCTTC 57.302 34.615 0.00 0.00 0.00 3.46
4501 5254 2.689983 AGGCACTCAACAAGAAACCTTG 59.310 45.455 3.85 3.85 44.92 3.61
4513 5266 3.255642 GCACTTTGGAATAAGGCACTCAA 59.744 43.478 0.00 0.00 38.49 3.02
4518 5271 5.016173 ACAATAGCACTTTGGAATAAGGCA 58.984 37.500 0.00 0.00 0.00 4.75
4519 5272 5.125417 TCACAATAGCACTTTGGAATAAGGC 59.875 40.000 0.00 0.00 0.00 4.35
4528 5281 2.995939 TCGAGCTCACAATAGCACTTTG 59.004 45.455 15.40 0.00 45.30 2.77
4553 5306 1.412710 GTTCATCTCCGGGAGCATGTA 59.587 52.381 19.48 13.54 0.00 2.29
4640 5395 5.866335 ATTTCCACGCGTGTAGAAAAATA 57.134 34.783 32.42 19.22 32.41 1.40
4705 5461 3.565482 GGAAGCATTTTGGAGCATCGATA 59.435 43.478 0.00 0.00 34.37 2.92
4707 5463 1.745087 GGAAGCATTTTGGAGCATCGA 59.255 47.619 0.00 0.00 34.37 3.59
4744 5501 8.519526 TGGCAAAAATAACAAAATCGATACTCT 58.480 29.630 0.00 0.00 0.00 3.24
4809 6371 4.142708 ACATTGATGATTTTTCTACGCGCA 60.143 37.500 5.73 0.00 0.00 6.09
4813 6375 9.611284 TCAAGAAACATTGATGATTTTTCTACG 57.389 29.630 7.88 0.00 41.56 3.51
4878 6440 8.537049 TGCTCTTGGATGAACAATAAAATTTG 57.463 30.769 0.00 0.00 0.00 2.32
4879 6441 9.158233 CATGCTCTTGGATGAACAATAAAATTT 57.842 29.630 0.00 0.00 43.49 1.82
4908 6473 1.135139 TGAAGTATGTGAGCTCGAGCC 59.865 52.381 32.94 23.66 43.38 4.70
4945 6510 7.457561 TGGCCTTTGTGCACAATATATATAGA 58.542 34.615 31.48 13.25 35.55 1.98
4959 6524 1.032014 TTCTGACTTGGCCTTTGTGC 58.968 50.000 3.32 0.00 0.00 4.57
4964 6529 1.308998 CACGTTTCTGACTTGGCCTT 58.691 50.000 3.32 0.00 0.00 4.35
5016 6581 2.411583 TGGATCCAGCATGTAGGACAT 58.588 47.619 11.44 0.00 39.91 3.06
5044 6610 3.393089 TCTCTCCTTTGCAACTCTCAC 57.607 47.619 0.00 0.00 0.00 3.51
5146 6713 9.599322 CACAGATAATAAACATAGCGGAATTTC 57.401 33.333 0.00 0.00 0.00 2.17
5168 6735 5.390673 GCTTGATTCTGAGAACATCACACAG 60.391 44.000 0.00 0.00 33.22 3.66
5169 6736 4.453478 GCTTGATTCTGAGAACATCACACA 59.547 41.667 0.00 0.00 33.22 3.72
5171 6738 4.903054 AGCTTGATTCTGAGAACATCACA 58.097 39.130 0.00 0.00 33.22 3.58
5172 6739 5.876612 AAGCTTGATTCTGAGAACATCAC 57.123 39.130 0.00 0.00 33.22 3.06
5173 6740 6.236409 AGAAAGCTTGATTCTGAGAACATCA 58.764 36.000 0.00 0.00 35.85 3.07
5174 6741 6.740411 AGAAAGCTTGATTCTGAGAACATC 57.260 37.500 0.00 0.00 35.85 3.06
5175 6742 7.521871 AAAGAAAGCTTGATTCTGAGAACAT 57.478 32.000 0.00 0.00 37.22 2.71
5176 6743 6.293081 CGAAAGAAAGCTTGATTCTGAGAACA 60.293 38.462 0.00 0.00 37.22 3.18
5206 7726 6.765512 AGATTAAGATAGAGCTTGTCTTTGGC 59.234 38.462 12.48 5.15 36.64 4.52
5262 9088 6.759827 CCCTTAGGAGATTGCATTTTGATTTG 59.240 38.462 0.00 0.00 33.47 2.32
5303 9129 4.957296 AGGTTAAATACTGCTACCATCCG 58.043 43.478 0.00 0.00 0.00 4.18
5334 9162 9.778993 CATAGACAACTTTTTATCATGACCAAG 57.221 33.333 0.00 0.50 0.00 3.61
5351 9179 6.451393 TGGCAACCAATTAAACATAGACAAC 58.549 36.000 0.00 0.00 0.00 3.32
5459 9287 3.119245 TCACTATGACCAGCCTAAACGAC 60.119 47.826 0.00 0.00 0.00 4.34
5470 9298 6.999950 TGCTAAGTTACTTTCACTATGACCA 58.000 36.000 1.94 0.00 0.00 4.02
5471 9299 7.603024 ACTTGCTAAGTTACTTTCACTATGACC 59.397 37.037 1.94 0.00 39.04 4.02
5472 9300 8.535690 ACTTGCTAAGTTACTTTCACTATGAC 57.464 34.615 1.94 0.00 39.04 3.06
5475 9303 9.991906 TGTTACTTGCTAAGTTACTTTCACTAT 57.008 29.630 1.94 0.00 40.62 2.12
5476 9304 9.991906 ATGTTACTTGCTAAGTTACTTTCACTA 57.008 29.630 1.94 0.00 40.62 2.74
5477 9305 8.904099 ATGTTACTTGCTAAGTTACTTTCACT 57.096 30.769 1.94 0.00 40.62 3.41
5482 9310 9.550406 TGTGTTATGTTACTTGCTAAGTTACTT 57.450 29.630 2.32 2.32 40.62 2.24
5483 9311 8.985805 GTGTGTTATGTTACTTGCTAAGTTACT 58.014 33.333 14.64 0.00 40.62 2.24
5484 9312 8.225777 GGTGTGTTATGTTACTTGCTAAGTTAC 58.774 37.037 6.82 8.42 42.81 2.50
5485 9313 8.152246 AGGTGTGTTATGTTACTTGCTAAGTTA 58.848 33.333 6.82 0.00 42.81 2.24
5486 9314 6.996282 AGGTGTGTTATGTTACTTGCTAAGTT 59.004 34.615 6.82 0.00 42.81 2.66
5487 9315 6.531021 AGGTGTGTTATGTTACTTGCTAAGT 58.469 36.000 6.74 6.74 45.40 2.24
5488 9316 6.649141 TGAGGTGTGTTATGTTACTTGCTAAG 59.351 38.462 0.00 0.00 0.00 2.18
5489 9317 6.526526 TGAGGTGTGTTATGTTACTTGCTAA 58.473 36.000 0.00 0.00 0.00 3.09
5490 9318 6.104146 TGAGGTGTGTTATGTTACTTGCTA 57.896 37.500 0.00 0.00 0.00 3.49
5491 9319 4.968259 TGAGGTGTGTTATGTTACTTGCT 58.032 39.130 0.00 0.00 0.00 3.91
5492 9320 5.468746 TCTTGAGGTGTGTTATGTTACTTGC 59.531 40.000 0.00 0.00 0.00 4.01
5493 9321 7.490962 TTCTTGAGGTGTGTTATGTTACTTG 57.509 36.000 0.00 0.00 0.00 3.16
5494 9322 8.514330 TTTTCTTGAGGTGTGTTATGTTACTT 57.486 30.769 0.00 0.00 0.00 2.24
5495 9323 8.514330 TTTTTCTTGAGGTGTGTTATGTTACT 57.486 30.769 0.00 0.00 0.00 2.24
5496 9324 9.744468 AATTTTTCTTGAGGTGTGTTATGTTAC 57.256 29.630 0.00 0.00 0.00 2.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.