Multiple sequence alignment - TraesCS1A01G191500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G191500 chr1A 100.000 2234 0 0 1649 3882 345792201 345789968 0.000000e+00 4126.0
1 TraesCS1A01G191500 chr1A 100.000 1236 0 0 1 1236 345793849 345792614 0.000000e+00 2283.0
2 TraesCS1A01G191500 chr1A 84.615 156 23 1 496 650 534530281 534530126 1.870000e-33 154.0
3 TraesCS1A01G191500 chr1A 84.076 157 22 3 494 650 404628997 404629150 8.690000e-32 148.0
4 TraesCS1A01G191500 chr1D 88.919 1110 96 18 1649 2750 273819906 273818816 0.000000e+00 1343.0
5 TraesCS1A01G191500 chr1D 95.593 590 19 4 3296 3882 273818491 273817906 0.000000e+00 939.0
6 TraesCS1A01G191500 chr1D 94.505 546 28 2 692 1236 273820480 273819936 0.000000e+00 841.0
7 TraesCS1A01G191500 chr1D 93.960 298 17 1 1 297 273887743 273887446 2.130000e-122 449.0
8 TraesCS1A01G191500 chr1D 87.629 291 33 1 2746 3036 273818785 273818498 6.210000e-88 335.0
9 TraesCS1A01G191500 chr1D 96.970 132 3 1 370 500 273846823 273846692 1.820000e-53 220.0
10 TraesCS1A01G191500 chr1D 96.212 132 3 2 370 500 273850854 273850724 8.450000e-52 215.0
11 TraesCS1A01G191500 chr1D 96.212 132 3 2 370 500 273853571 273853441 8.450000e-52 215.0
12 TraesCS1A01G191500 chr1D 96.154 130 4 1 372 500 273821100 273820971 1.090000e-50 211.0
13 TraesCS1A01G191500 chr1D 93.443 61 3 1 3053 3112 38291247 38291187 5.340000e-14 89.8
14 TraesCS1A01G191500 chr1D 95.652 46 1 1 3223 3267 483907639 483907684 5.380000e-09 73.1
15 TraesCS1A01G191500 chr1B 87.950 1112 104 16 1649 2750 373148984 373147893 0.000000e+00 1284.0
16 TraesCS1A01G191500 chr1B 92.190 589 15 5 3296 3882 373147568 373147009 0.000000e+00 804.0
17 TraesCS1A01G191500 chr1B 91.537 449 35 3 790 1236 373149463 373149016 1.980000e-172 616.0
18 TraesCS1A01G191500 chr1B 87.151 179 23 0 66 244 373151561 373151383 1.830000e-48 204.0
19 TraesCS1A01G191500 chr1B 89.474 152 15 1 3112 3263 647303950 647304100 1.420000e-44 191.0
20 TraesCS1A01G191500 chr1B 88.525 61 6 1 3053 3112 614972632 614972572 5.380000e-09 73.1
21 TraesCS1A01G191500 chr1B 93.023 43 3 0 184 226 26505463 26505421 3.240000e-06 63.9
22 TraesCS1A01G191500 chrUn 96.212 132 3 2 370 500 367302689 367302559 8.450000e-52 215.0
23 TraesCS1A01G191500 chrUn 96.212 132 3 2 370 500 367304654 367304524 8.450000e-52 215.0
24 TraesCS1A01G191500 chr6B 95.614 114 5 0 3112 3225 438623342 438623455 2.380000e-42 183.0
25 TraesCS1A01G191500 chr6B 90.625 128 7 4 3101 3225 560788968 560789093 8.630000e-37 165.0
26 TraesCS1A01G191500 chr7A 92.742 124 5 4 3112 3233 510382257 510382136 3.990000e-40 176.0
27 TraesCS1A01G191500 chr7A 84.906 159 20 4 496 652 610942780 610942936 1.440000e-34 158.0
28 TraesCS1A01G191500 chr7A 84.615 156 23 1 496 650 49620966 49621121 1.870000e-33 154.0
29 TraesCS1A01G191500 chr6A 93.913 115 7 0 3112 3226 447643732 447643846 1.430000e-39 174.0
30 TraesCS1A01G191500 chr6A 84.615 156 19 5 496 650 147454487 147454336 2.420000e-32 150.0
31 TraesCS1A01G191500 chr6A 89.231 65 6 1 3222 3286 75913687 75913624 3.220000e-11 80.5
32 TraesCS1A01G191500 chr5A 93.277 119 6 2 3112 3229 594645788 594645671 1.430000e-39 174.0
33 TraesCS1A01G191500 chr5A 94.231 52 3 0 3214 3265 578052395 578052344 3.220000e-11 80.5
34 TraesCS1A01G191500 chr4A 93.913 115 7 0 3114 3228 603669023 603668909 1.430000e-39 174.0
35 TraesCS1A01G191500 chr2A 93.220 118 8 0 3112 3229 12628240 12628357 1.430000e-39 174.0
36 TraesCS1A01G191500 chr2A 84.713 157 22 2 496 650 197250086 197250242 5.190000e-34 156.0
37 TraesCS1A01G191500 chr2A 79.861 144 20 5 364 498 59380870 59381013 3.190000e-16 97.1
38 TraesCS1A01G191500 chr2A 100.000 28 0 0 3038 3065 247004086 247004113 7.000000e-03 52.8
39 TraesCS1A01G191500 chr3D 84.756 164 15 6 496 655 523636086 523635929 5.190000e-34 156.0
40 TraesCS1A01G191500 chr3D 78.788 132 19 5 378 500 1605885 1605754 3.220000e-11 80.5
41 TraesCS1A01G191500 chr3B 84.810 158 21 3 496 652 780516302 780516147 5.190000e-34 156.0
42 TraesCS1A01G191500 chr3B 91.228 57 5 0 3056 3112 804729701 804729645 1.160000e-10 78.7
43 TraesCS1A01G191500 chr3A 80.365 219 28 5 3056 3264 686185620 686185407 6.720000e-33 152.0
44 TraesCS1A01G191500 chr3A 100.000 28 0 0 3261 3288 440422162 440422189 7.000000e-03 52.8
45 TraesCS1A01G191500 chr5B 84.076 157 22 3 496 650 377216521 377216366 8.690000e-32 148.0
46 TraesCS1A01G191500 chr5B 92.857 56 4 0 3057 3112 626252200 626252145 8.940000e-12 82.4
47 TraesCS1A01G191500 chr2D 83.007 153 16 8 364 506 591276948 591276796 3.150000e-26 130.0
48 TraesCS1A01G191500 chr5D 96.610 59 2 0 3054 3112 292715883 292715825 8.880000e-17 99.0
49 TraesCS1A01G191500 chr5D 90.196 51 3 2 3034 3083 27095682 27095633 9.000000e-07 65.8
50 TraesCS1A01G191500 chr7B 92.188 64 3 2 3223 3286 545104454 545104393 5.340000e-14 89.8
51 TraesCS1A01G191500 chr7B 85.714 56 5 3 3242 3294 578034363 578034418 5.420000e-04 56.5
52 TraesCS1A01G191500 chr4B 93.220 59 4 0 3054 3112 671812117 671812059 1.920000e-13 87.9
53 TraesCS1A01G191500 chr4B 89.474 57 6 0 3056 3112 541857780 541857836 5.380000e-09 73.1
54 TraesCS1A01G191500 chr6D 94.444 54 3 0 3212 3265 62122751 62122698 2.490000e-12 84.2
55 TraesCS1A01G191500 chr6D 87.692 65 7 1 3222 3286 59626154 59626091 1.500000e-09 75.0
56 TraesCS1A01G191500 chr6D 89.655 58 6 0 3055 3112 76197816 76197759 1.500000e-09 75.0
57 TraesCS1A01G191500 chr2B 85.526 76 11 0 3034 3109 245476378 245476453 3.220000e-11 80.5
58 TraesCS1A01G191500 chr2B 91.525 59 1 4 3212 3267 625549908 625549851 1.160000e-10 78.7
59 TraesCS1A01G191500 chr2B 100.000 30 0 0 3038 3067 11037618 11037589 5.420000e-04 56.5
60 TraesCS1A01G191500 chr7D 91.228 57 5 0 3056 3112 473596281 473596225 1.160000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G191500 chr1A 345789968 345793849 3881 True 3204.500000 4126 100.000000 1 3882 2 chr1A.!!$R2 3881
1 TraesCS1A01G191500 chr1D 273817906 273821100 3194 True 733.800000 1343 92.560000 372 3882 5 chr1D.!!$R3 3510
2 TraesCS1A01G191500 chr1D 273846692 273853571 6879 True 216.666667 220 96.464667 370 500 3 chr1D.!!$R4 130
3 TraesCS1A01G191500 chr1B 373147009 373151561 4552 True 727.000000 1284 89.707000 66 3882 4 chr1B.!!$R3 3816
4 TraesCS1A01G191500 chrUn 367302559 367304654 2095 True 215.000000 215 96.212000 370 500 2 chrUn.!!$R1 130

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
34 35 0.246635 GTGATGCCACCGACACTAGT 59.753 55.0 0.0 0.0 37.33 2.57 F
59 60 0.251916 TCAAAGAGGTATGGGGCACG 59.748 55.0 0.0 0.0 0.00 5.34 F
1211 7117 0.107800 GAAAGGCCCGGTAGGTTCTC 60.108 60.0 0.0 0.0 38.26 2.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1192 7098 0.107800 GAGAACCTACCGGGCCTTTC 60.108 60.0 6.32 3.03 39.10 2.62 R
1874 7781 1.034838 GCCACCATTACCATTGGCGA 61.035 55.0 1.54 0.00 44.88 5.54 R
3202 9754 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.0 5.23 0.00 44.66 2.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 1.368641 TGTTGCTATGGACGTGATGC 58.631 50.000 0.00 0.00 0.00 3.91
22 23 0.657840 GTTGCTATGGACGTGATGCC 59.342 55.000 0.00 0.00 0.00 4.40
23 24 0.251634 TTGCTATGGACGTGATGCCA 59.748 50.000 0.00 0.00 38.78 4.92
24 25 0.461870 TGCTATGGACGTGATGCCAC 60.462 55.000 0.00 0.00 36.92 5.01
25 26 1.160329 GCTATGGACGTGATGCCACC 61.160 60.000 0.00 0.00 40.12 4.61
26 27 0.875908 CTATGGACGTGATGCCACCG 60.876 60.000 0.00 0.00 40.12 4.94
27 28 1.324005 TATGGACGTGATGCCACCGA 61.324 55.000 0.00 0.00 40.12 4.69
28 29 2.813908 GGACGTGATGCCACCGAC 60.814 66.667 0.00 0.00 40.12 4.79
29 30 2.048597 GACGTGATGCCACCGACA 60.049 61.111 0.00 0.00 40.12 4.35
30 31 2.357034 ACGTGATGCCACCGACAC 60.357 61.111 0.00 0.00 40.12 3.67
31 32 2.048222 CGTGATGCCACCGACACT 60.048 61.111 0.00 0.00 40.12 3.55
32 33 1.214325 CGTGATGCCACCGACACTA 59.786 57.895 0.00 0.00 40.12 2.74
33 34 0.802222 CGTGATGCCACCGACACTAG 60.802 60.000 0.00 0.00 40.12 2.57
34 35 0.246635 GTGATGCCACCGACACTAGT 59.753 55.000 0.00 0.00 37.33 2.57
35 36 0.973632 TGATGCCACCGACACTAGTT 59.026 50.000 0.00 0.00 0.00 2.24
36 37 1.346395 TGATGCCACCGACACTAGTTT 59.654 47.619 0.00 0.00 0.00 2.66
37 38 2.563620 TGATGCCACCGACACTAGTTTA 59.436 45.455 0.00 0.00 0.00 2.01
38 39 3.196901 TGATGCCACCGACACTAGTTTAT 59.803 43.478 0.00 0.00 0.00 1.40
39 40 2.967362 TGCCACCGACACTAGTTTATG 58.033 47.619 0.00 0.00 0.00 1.90
40 41 2.300723 TGCCACCGACACTAGTTTATGT 59.699 45.455 0.00 0.00 0.00 2.29
41 42 2.928116 GCCACCGACACTAGTTTATGTC 59.072 50.000 0.00 0.00 41.54 3.06
42 43 3.615592 GCCACCGACACTAGTTTATGTCA 60.616 47.826 10.72 0.00 44.54 3.58
43 44 4.562082 CCACCGACACTAGTTTATGTCAA 58.438 43.478 10.72 0.00 44.54 3.18
44 45 4.992319 CCACCGACACTAGTTTATGTCAAA 59.008 41.667 10.72 0.00 44.54 2.69
45 46 5.120208 CCACCGACACTAGTTTATGTCAAAG 59.880 44.000 10.72 3.04 44.54 2.77
46 47 5.924254 CACCGACACTAGTTTATGTCAAAGA 59.076 40.000 10.72 0.00 44.54 2.52
47 48 6.089551 CACCGACACTAGTTTATGTCAAAGAG 59.910 42.308 10.72 0.00 44.54 2.85
48 49 5.577164 CCGACACTAGTTTATGTCAAAGAGG 59.423 44.000 10.72 1.54 44.54 3.69
49 50 6.157211 CGACACTAGTTTATGTCAAAGAGGT 58.843 40.000 10.72 0.00 44.54 3.85
50 51 7.310664 CGACACTAGTTTATGTCAAAGAGGTA 58.689 38.462 10.72 0.00 44.54 3.08
51 52 7.974501 CGACACTAGTTTATGTCAAAGAGGTAT 59.025 37.037 10.72 0.00 44.54 2.73
52 53 9.088512 GACACTAGTTTATGTCAAAGAGGTATG 57.911 37.037 6.39 0.00 43.89 2.39
53 54 8.041323 ACACTAGTTTATGTCAAAGAGGTATGG 58.959 37.037 0.00 0.00 0.00 2.74
54 55 7.495934 CACTAGTTTATGTCAAAGAGGTATGGG 59.504 40.741 0.00 0.00 0.00 4.00
55 56 5.755849 AGTTTATGTCAAAGAGGTATGGGG 58.244 41.667 0.00 0.00 0.00 4.96
56 57 2.736670 ATGTCAAAGAGGTATGGGGC 57.263 50.000 0.00 0.00 0.00 5.80
57 58 1.367346 TGTCAAAGAGGTATGGGGCA 58.633 50.000 0.00 0.00 0.00 5.36
58 59 1.004277 TGTCAAAGAGGTATGGGGCAC 59.996 52.381 0.00 0.00 0.00 5.01
59 60 0.251916 TCAAAGAGGTATGGGGCACG 59.748 55.000 0.00 0.00 0.00 5.34
60 61 0.251916 CAAAGAGGTATGGGGCACGA 59.748 55.000 0.00 0.00 0.00 4.35
61 62 0.988832 AAAGAGGTATGGGGCACGAA 59.011 50.000 0.00 0.00 0.00 3.85
62 63 0.988832 AAGAGGTATGGGGCACGAAA 59.011 50.000 0.00 0.00 0.00 3.46
63 64 0.541863 AGAGGTATGGGGCACGAAAG 59.458 55.000 0.00 0.00 0.00 2.62
64 65 0.463833 GAGGTATGGGGCACGAAAGG 60.464 60.000 0.00 0.00 0.00 3.11
72 73 1.449778 GGCACGAAAGGCCCTCTAC 60.450 63.158 0.00 0.00 45.87 2.59
82 83 0.320050 GGCCCTCTACTGCTATCAGC 59.680 60.000 0.00 0.00 44.10 4.26
105 106 3.474920 AGAAGTATGGGGAGATTGGGTT 58.525 45.455 0.00 0.00 0.00 4.11
107 108 4.294970 AGAAGTATGGGGAGATTGGGTTTT 59.705 41.667 0.00 0.00 0.00 2.43
109 110 3.858638 AGTATGGGGAGATTGGGTTTTCT 59.141 43.478 0.00 0.00 0.00 2.52
112 113 2.178984 TGGGGAGATTGGGTTTTCTTGT 59.821 45.455 0.00 0.00 0.00 3.16
115 116 3.408634 GGAGATTGGGTTTTCTTGTCGA 58.591 45.455 0.00 0.00 0.00 4.20
121 122 2.158593 TGGGTTTTCTTGTCGAATCCCA 60.159 45.455 11.42 11.42 45.42 4.37
126 127 1.449601 CTTGTCGAATCCCACGGGG 60.450 63.158 0.00 0.00 46.11 5.73
176 177 6.428465 TCCATTAAATAAAACTGAGTGCGTGA 59.572 34.615 0.00 0.00 0.00 4.35
177 178 7.120579 TCCATTAAATAAAACTGAGTGCGTGAT 59.879 33.333 0.00 0.00 0.00 3.06
179 180 8.577939 CATTAAATAAAACTGAGTGCGTGATTG 58.422 33.333 0.00 0.00 0.00 2.67
191 192 1.130561 GCGTGATTGTCCTTACCAAGC 59.869 52.381 0.00 0.00 0.00 4.01
203 204 6.058183 GTCCTTACCAAGCTCATGACAATAT 58.942 40.000 0.00 0.00 0.00 1.28
208 209 4.641989 ACCAAGCTCATGACAATATCAACC 59.358 41.667 0.00 0.00 41.93 3.77
216 217 6.484288 TCATGACAATATCAACCCACTTCTT 58.516 36.000 0.00 0.00 41.93 2.52
218 219 8.106462 TCATGACAATATCAACCCACTTCTTAA 58.894 33.333 0.00 0.00 41.93 1.85
227 228 2.719705 ACCCACTTCTTAATGAACCCCA 59.280 45.455 0.00 0.00 0.00 4.96
235 236 4.394729 TCTTAATGAACCCCATTATCGCC 58.605 43.478 0.00 0.00 44.58 5.54
244 245 2.571212 CCCATTATCGCCTGCAAGTAA 58.429 47.619 0.00 0.00 0.00 2.24
246 247 3.569701 CCCATTATCGCCTGCAAGTAATT 59.430 43.478 0.00 0.00 0.00 1.40
247 248 4.320494 CCCATTATCGCCTGCAAGTAATTC 60.320 45.833 0.00 0.00 0.00 2.17
248 249 4.320494 CCATTATCGCCTGCAAGTAATTCC 60.320 45.833 0.00 0.00 0.00 3.01
249 250 2.418368 ATCGCCTGCAAGTAATTCCA 57.582 45.000 0.00 0.00 0.00 3.53
252 253 2.682856 TCGCCTGCAAGTAATTCCATTC 59.317 45.455 0.00 0.00 0.00 2.67
255 256 4.440525 CGCCTGCAAGTAATTCCATTCAAT 60.441 41.667 0.00 0.00 0.00 2.57
256 257 5.422145 GCCTGCAAGTAATTCCATTCAATT 58.578 37.500 0.00 0.00 0.00 2.32
258 259 7.212274 GCCTGCAAGTAATTCCATTCAATTAT 58.788 34.615 0.00 0.00 32.20 1.28
259 260 7.170320 GCCTGCAAGTAATTCCATTCAATTATG 59.830 37.037 0.00 0.00 32.20 1.90
260 261 8.199449 CCTGCAAGTAATTCCATTCAATTATGT 58.801 33.333 0.00 0.00 32.20 2.29
261 262 9.241317 CTGCAAGTAATTCCATTCAATTATGTC 57.759 33.333 0.00 0.00 32.20 3.06
262 263 8.747471 TGCAAGTAATTCCATTCAATTATGTCA 58.253 29.630 0.00 0.00 32.20 3.58
263 264 9.754382 GCAAGTAATTCCATTCAATTATGTCAT 57.246 29.630 0.00 0.00 32.20 3.06
267 268 9.846248 GTAATTCCATTCAATTATGTCATAGGC 57.154 33.333 0.00 0.00 32.20 3.93
268 269 8.716674 AATTCCATTCAATTATGTCATAGGCT 57.283 30.769 0.00 0.00 0.00 4.58
272 273 9.639563 TCCATTCAATTATGTCATAGGCTTTTA 57.360 29.630 0.00 0.00 0.00 1.52
284 285 9.851686 TGTCATAGGCTTTTATCATATCAAGTT 57.148 29.630 0.00 0.00 0.00 2.66
299 770 9.295825 TCATATCAAGTTTTAATGGACAACAGT 57.704 29.630 0.00 0.00 0.00 3.55
300 771 9.345517 CATATCAAGTTTTAATGGACAACAGTG 57.654 33.333 0.00 0.00 0.00 3.66
327 798 6.357367 TCCACTTTATGAGGAGAAATAAGGC 58.643 40.000 0.00 0.00 31.74 4.35
328 799 5.237344 CCACTTTATGAGGAGAAATAAGGCG 59.763 44.000 0.00 0.00 0.00 5.52
329 800 5.817816 CACTTTATGAGGAGAAATAAGGCGT 59.182 40.000 0.00 0.00 0.00 5.68
330 801 6.984474 CACTTTATGAGGAGAAATAAGGCGTA 59.016 38.462 0.00 0.00 0.00 4.42
331 802 7.169982 CACTTTATGAGGAGAAATAAGGCGTAG 59.830 40.741 0.00 0.00 0.00 3.51
333 804 7.828508 TTATGAGGAGAAATAAGGCGTAGTA 57.171 36.000 0.00 0.00 0.00 1.82
335 806 5.198965 TGAGGAGAAATAAGGCGTAGTAGT 58.801 41.667 0.00 0.00 0.00 2.73
336 807 6.359804 TGAGGAGAAATAAGGCGTAGTAGTA 58.640 40.000 0.00 0.00 0.00 1.82
337 808 6.485984 TGAGGAGAAATAAGGCGTAGTAGTAG 59.514 42.308 0.00 0.00 0.00 2.57
338 809 6.363882 AGGAGAAATAAGGCGTAGTAGTAGT 58.636 40.000 0.00 0.00 0.00 2.73
339 810 7.512992 AGGAGAAATAAGGCGTAGTAGTAGTA 58.487 38.462 0.00 0.00 0.00 1.82
340 811 7.661027 AGGAGAAATAAGGCGTAGTAGTAGTAG 59.339 40.741 0.00 0.00 0.00 2.57
341 812 7.443879 GGAGAAATAAGGCGTAGTAGTAGTAGT 59.556 40.741 0.00 0.00 0.00 2.73
348 1238 6.279882 AGGCGTAGTAGTAGTAGTAACTCTG 58.720 44.000 0.00 0.00 37.15 3.35
352 1242 7.514435 GCGTAGTAGTAGTAGTAACTCTGAACG 60.514 44.444 0.00 0.00 37.15 3.95
353 1243 7.698550 CGTAGTAGTAGTAGTAACTCTGAACGA 59.301 40.741 0.00 0.00 37.15 3.85
354 1244 9.019764 GTAGTAGTAGTAGTAACTCTGAACGAG 57.980 40.741 0.00 0.00 45.56 4.18
358 1248 5.646577 AGTAGTAACTCTGAACGAGCATT 57.353 39.130 0.00 0.00 43.85 3.56
359 1249 5.403246 AGTAGTAACTCTGAACGAGCATTG 58.597 41.667 0.00 0.00 43.85 2.82
369 1259 0.394216 ACGAGCATTGGGCATTGCTA 60.394 50.000 8.82 0.00 44.91 3.49
370 1260 0.309922 CGAGCATTGGGCATTGCTAG 59.690 55.000 8.82 5.00 44.91 3.42
521 2073 8.424274 TGTGTCATAAGTATTGCACATCTAAG 57.576 34.615 0.00 0.00 32.79 2.18
524 2076 8.478066 TGTCATAAGTATTGCACATCTAAGTCT 58.522 33.333 0.00 0.00 0.00 3.24
543 2339 7.470289 AAGTCTTATGTCATTGATCTTACGC 57.530 36.000 0.00 0.00 0.00 4.42
545 2341 4.982295 TCTTATGTCATTGATCTTACGCGG 59.018 41.667 12.47 0.00 0.00 6.46
547 2343 3.239587 TGTCATTGATCTTACGCGGAA 57.760 42.857 12.47 7.57 0.00 4.30
552 2348 4.873259 TCATTGATCTTACGCGGAAATTCA 59.127 37.500 12.47 11.35 0.00 2.57
553 2349 5.352846 TCATTGATCTTACGCGGAAATTCAA 59.647 36.000 23.06 23.06 0.00 2.69
558 2354 4.059511 TCTTACGCGGAAATTCAAGTGAA 58.940 39.130 12.47 0.00 38.56 3.18
559 2355 4.693566 TCTTACGCGGAAATTCAAGTGAAT 59.306 37.500 12.47 0.54 45.91 2.57
560 2356 5.870433 TCTTACGCGGAAATTCAAGTGAATA 59.130 36.000 12.47 0.00 43.41 1.75
564 3174 6.386654 ACGCGGAAATTCAAGTGAATATTTT 58.613 32.000 12.47 0.00 43.41 1.82
621 3231 9.571810 GATTGTGTCATTTAGATGTGCAATAAA 57.428 29.630 0.00 0.00 34.10 1.40
653 4786 5.010282 ACCTAGATGTGCCCTAAACAAAAG 58.990 41.667 0.00 0.00 0.00 2.27
655 4788 6.177610 CCTAGATGTGCCCTAAACAAAAGTA 58.822 40.000 0.00 0.00 0.00 2.24
656 4789 6.828785 CCTAGATGTGCCCTAAACAAAAGTAT 59.171 38.462 0.00 0.00 0.00 2.12
657 4790 7.339466 CCTAGATGTGCCCTAAACAAAAGTATT 59.661 37.037 0.00 0.00 0.00 1.89
687 4820 2.487762 GGCCTTTTATTTGCTTTTGGGC 59.512 45.455 0.00 0.00 36.70 5.36
688 4821 2.487762 GCCTTTTATTTGCTTTTGGGCC 59.512 45.455 0.00 0.00 0.00 5.80
689 4822 3.081061 CCTTTTATTTGCTTTTGGGCCC 58.919 45.455 17.59 17.59 0.00 5.80
690 4823 3.497584 CCTTTTATTTGCTTTTGGGCCCA 60.498 43.478 24.45 24.45 0.00 5.36
750 6655 5.607939 TGGATCCGTAGTGAACACATAAT 57.392 39.130 7.39 0.00 0.00 1.28
812 6717 0.320421 ACGCGTGCACCATAACTTCT 60.320 50.000 12.93 0.00 0.00 2.85
883 6788 0.323629 GTCCCTTCGATTCCCACACA 59.676 55.000 0.00 0.00 0.00 3.72
892 6797 0.779997 ATTCCCACACAAGGCTCCTT 59.220 50.000 0.00 0.00 36.60 3.36
965 6871 1.047801 TCAGGCATTGCTATCCGCTA 58.952 50.000 8.82 0.00 40.11 4.26
966 6872 1.151668 CAGGCATTGCTATCCGCTAC 58.848 55.000 8.82 0.00 40.11 3.58
1078 6984 3.138468 TGAAGATACTGGAGATCGGAGGA 59.862 47.826 0.00 0.00 0.00 3.71
1081 6987 1.519498 TACTGGAGATCGGAGGAGGA 58.481 55.000 0.00 0.00 0.00 3.71
1083 6989 0.825840 CTGGAGATCGGAGGAGGACC 60.826 65.000 0.00 0.00 0.00 4.46
1084 6990 1.230497 GGAGATCGGAGGAGGACCA 59.770 63.158 0.00 0.00 38.94 4.02
1164 7070 1.200948 GGTGAACCTCAAAGCATCAGC 59.799 52.381 0.00 0.00 42.56 4.26
1211 7117 0.107800 GAAAGGCCCGGTAGGTTCTC 60.108 60.000 0.00 0.00 38.26 2.87
1744 7651 8.035984 ACCGAGGAAATTGTTTGTTTTCTTAAA 58.964 29.630 0.00 0.00 33.38 1.52
1808 7715 5.182760 ACATCTTCTCTTTTTCCTGTCATGC 59.817 40.000 0.00 0.00 0.00 4.06
1834 7741 5.551233 TGTAGATCAAAGTCAAGGTGGAAG 58.449 41.667 0.00 0.00 0.00 3.46
1854 7761 1.609555 GTAGATCGGTCGGAGCATTCT 59.390 52.381 8.06 10.34 32.03 2.40
1867 7774 2.573941 GCATTCTGCAGAAACCATCC 57.426 50.000 31.55 13.00 44.26 3.51
1868 7775 1.135721 GCATTCTGCAGAAACCATCCC 59.864 52.381 31.55 11.73 44.26 3.85
1870 7777 3.889815 CATTCTGCAGAAACCATCCCTA 58.110 45.455 31.55 6.55 37.61 3.53
1871 7778 4.467769 CATTCTGCAGAAACCATCCCTAT 58.532 43.478 31.55 9.55 37.61 2.57
1872 7779 3.845781 TCTGCAGAAACCATCCCTATC 57.154 47.619 15.67 0.00 0.00 2.08
1873 7780 3.114606 TCTGCAGAAACCATCCCTATCA 58.885 45.455 15.67 0.00 0.00 2.15
1874 7781 3.718434 TCTGCAGAAACCATCCCTATCAT 59.282 43.478 15.67 0.00 0.00 2.45
1881 7788 1.988107 ACCATCCCTATCATCGCCAAT 59.012 47.619 0.00 0.00 0.00 3.16
1890 7797 2.727123 TCATCGCCAATGGTAATGGT 57.273 45.000 13.44 0.00 40.23 3.55
1899 7806 0.684153 ATGGTAATGGTGGCCTGCAC 60.684 55.000 3.32 0.00 0.00 4.57
1932 7839 1.594331 GTGATCGCTTGGATAACCCC 58.406 55.000 0.00 0.00 34.82 4.95
1934 7841 2.367567 GTGATCGCTTGGATAACCCCTA 59.632 50.000 0.00 0.00 34.82 3.53
1935 7842 3.008049 GTGATCGCTTGGATAACCCCTAT 59.992 47.826 0.00 0.00 34.82 2.57
1936 7843 3.007940 TGATCGCTTGGATAACCCCTATG 59.992 47.826 0.00 0.00 34.82 2.23
1956 7863 7.419981 CCCTATGAGATTGAAGAAGATGAACCT 60.420 40.741 0.00 0.00 0.00 3.50
2006 7913 2.608752 CCAAGCCTGATGTCAAAAGCAC 60.609 50.000 0.00 0.00 0.00 4.40
2012 7919 1.133513 TGATGTCAAAAGCACCCCTGT 60.134 47.619 0.00 0.00 0.00 4.00
2044 7951 1.287425 GGTGATGTCCGATTCCGAAC 58.713 55.000 0.00 0.00 38.22 3.95
2075 7982 3.389206 GCTCTTCGCCGACATGTC 58.611 61.111 16.21 16.21 0.00 3.06
2076 7983 1.153745 GCTCTTCGCCGACATGTCT 60.154 57.895 22.95 0.00 0.00 3.41
2082 7989 2.202756 GCCGACATGTCTCCGGTC 60.203 66.667 22.95 12.28 44.63 4.79
2086 7993 1.078759 CGACATGTCTCCGGTCAAGC 61.079 60.000 22.95 0.00 0.00 4.01
2088 7995 1.079819 CATGTCTCCGGTCAAGCGT 60.080 57.895 0.00 0.00 0.00 5.07
2093 8000 2.027625 CTCCGGTCAAGCGTGAACC 61.028 63.158 12.25 10.87 38.33 3.62
2106 8013 2.086869 CGTGAACCTGAAGATGGCAAT 58.913 47.619 0.00 0.00 0.00 3.56
2109 8016 2.225091 TGAACCTGAAGATGGCAATGGT 60.225 45.455 0.00 0.00 0.00 3.55
2123 8030 0.320771 AATGGTGCGAACGAGCTCTT 60.321 50.000 12.85 0.00 38.13 2.85
2124 8031 0.737715 ATGGTGCGAACGAGCTCTTC 60.738 55.000 12.85 12.95 38.13 2.87
2125 8032 2.095252 GGTGCGAACGAGCTCTTCC 61.095 63.158 12.85 9.04 38.13 3.46
2131 8038 1.336887 CGAACGAGCTCTTCCCTGAAA 60.337 52.381 12.85 0.00 0.00 2.69
2139 8046 1.918957 CTCTTCCCTGAAACCATCCCT 59.081 52.381 0.00 0.00 0.00 4.20
2147 8054 0.321653 GAAACCATCCCTGACGTGCT 60.322 55.000 0.00 0.00 0.00 4.40
2149 8056 2.821366 CCATCCCTGACGTGCTGC 60.821 66.667 0.00 0.00 0.00 5.25
2157 8064 3.782244 GACGTGCTGCTGCCGAAG 61.782 66.667 24.92 12.26 38.71 3.79
2169 8076 1.153549 GCCGAAGAGCGTTCCTGAT 60.154 57.895 0.00 0.00 38.67 2.90
2170 8077 1.424493 GCCGAAGAGCGTTCCTGATG 61.424 60.000 0.00 0.00 38.67 3.07
2172 8079 1.673033 CCGAAGAGCGTTCCTGATGTT 60.673 52.381 0.00 0.00 38.67 2.71
2176 8085 0.955428 GAGCGTTCCTGATGTTGCCA 60.955 55.000 0.00 0.00 0.00 4.92
2182 8091 2.821969 GTTCCTGATGTTGCCAGTGAAT 59.178 45.455 0.00 0.00 0.00 2.57
2183 8092 2.439409 TCCTGATGTTGCCAGTGAATG 58.561 47.619 0.00 0.00 0.00 2.67
2311 8220 0.612744 TCGTCAATCCTGGCATGTCA 59.387 50.000 0.00 0.00 0.00 3.58
2336 8248 2.564771 CAAAGTGTGAGACTGAAGGCA 58.435 47.619 0.00 0.00 34.02 4.75
2447 8359 1.079127 ATTCCTGACTTGTCGCCGG 60.079 57.895 0.00 0.00 0.00 6.13
2478 8390 0.247736 AGTGGCACGGATGAACTCTC 59.752 55.000 12.71 0.00 0.00 3.20
2499 8411 1.821136 CAAGGAGAAAACCATCCCTGC 59.179 52.381 0.00 0.00 36.14 4.85
2502 8414 1.342374 GGAGAAAACCATCCCTGCCAT 60.342 52.381 0.00 0.00 0.00 4.40
2559 8964 2.653726 TGTTGCTGTTCCTGTCATGTT 58.346 42.857 0.00 0.00 0.00 2.71
2573 8978 2.161410 GTCATGTTGCCGATAAAGCACA 59.839 45.455 0.00 0.00 40.69 4.57
2575 8980 3.254411 TCATGTTGCCGATAAAGCACAAA 59.746 39.130 0.00 0.00 40.69 2.83
2576 8981 3.006659 TGTTGCCGATAAAGCACAAAC 57.993 42.857 0.00 0.00 40.69 2.93
2577 8982 2.287909 TGTTGCCGATAAAGCACAAACC 60.288 45.455 0.00 0.00 40.69 3.27
2578 8983 1.904287 TGCCGATAAAGCACAAACCT 58.096 45.000 0.00 0.00 34.69 3.50
2579 8984 1.539388 TGCCGATAAAGCACAAACCTG 59.461 47.619 0.00 0.00 34.69 4.00
2580 8985 1.810151 GCCGATAAAGCACAAACCTGA 59.190 47.619 0.00 0.00 0.00 3.86
2585 8990 4.378459 CGATAAAGCACAAACCTGAAGACC 60.378 45.833 0.00 0.00 0.00 3.85
2603 9008 2.414994 CCATCATGGTGCTGAAGAGT 57.585 50.000 0.00 0.00 31.35 3.24
2608 9013 1.802960 CATGGTGCTGAAGAGTGTGTC 59.197 52.381 0.00 0.00 0.00 3.67
2617 9022 2.554462 TGAAGAGTGTGTCGGAGAAGAG 59.446 50.000 0.00 0.00 39.69 2.85
2670 9075 1.274712 CTCAGCCCTGAAGGAAGAGT 58.725 55.000 0.00 0.00 39.39 3.24
2671 9076 0.979665 TCAGCCCTGAAGGAAGAGTG 59.020 55.000 0.00 0.00 38.24 3.51
2674 9079 1.777272 AGCCCTGAAGGAAGAGTGTTT 59.223 47.619 0.00 0.00 38.24 2.83
2675 9080 1.882623 GCCCTGAAGGAAGAGTGTTTG 59.117 52.381 0.00 0.00 38.24 2.93
2676 9081 2.487265 GCCCTGAAGGAAGAGTGTTTGA 60.487 50.000 0.00 0.00 38.24 2.69
2680 9085 4.694509 CCTGAAGGAAGAGTGTTTGATGAG 59.305 45.833 0.00 0.00 37.39 2.90
2754 9192 0.528924 CCAGCTTGCTATGCTTGCAA 59.471 50.000 0.00 0.00 46.48 4.08
2768 9206 5.142061 TGCTTGCAATGAGAAATGATGTT 57.858 34.783 0.00 0.00 0.00 2.71
2772 9210 7.820386 TGCTTGCAATGAGAAATGATGTTTTAT 59.180 29.630 0.00 0.00 0.00 1.40
2791 9229 8.511321 TGTTTTATGCTCCACAAATAACAGTAG 58.489 33.333 0.00 0.00 0.00 2.57
2793 9231 9.727859 TTTTATGCTCCACAAATAACAGTAGTA 57.272 29.630 0.00 0.00 0.00 1.82
2794 9232 8.712285 TTATGCTCCACAAATAACAGTAGTAC 57.288 34.615 0.00 0.00 0.00 2.73
2795 9233 6.354794 TGCTCCACAAATAACAGTAGTACT 57.645 37.500 0.00 0.00 0.00 2.73
2796 9234 7.470935 TGCTCCACAAATAACAGTAGTACTA 57.529 36.000 1.57 0.00 0.00 1.82
2810 9248 8.118976 ACAGTAGTACTACTAAGTGCAAATGA 57.881 34.615 30.34 0.00 43.98 2.57
2921 9473 4.901197 TGAATAACTAGGTGGCACTGAA 57.099 40.909 18.45 2.31 0.00 3.02
2922 9474 5.235850 TGAATAACTAGGTGGCACTGAAA 57.764 39.130 18.45 0.00 0.00 2.69
2925 9477 2.841442 ACTAGGTGGCACTGAAAGAC 57.159 50.000 18.45 0.00 37.43 3.01
2944 9496 1.937546 CTTTCCGCATCCAAGGCACC 61.938 60.000 0.00 0.00 0.00 5.01
3013 9565 2.417719 GCAAGGTAACCTGACTGACTG 58.582 52.381 0.00 0.00 32.13 3.51
3022 9574 0.545171 CTGACTGACTGCCCATCCAT 59.455 55.000 0.00 0.00 0.00 3.41
3024 9576 0.543277 GACTGACTGCCCATCCATGA 59.457 55.000 0.00 0.00 0.00 3.07
3045 9597 3.993535 CTTGCAAGCACTCCCTCC 58.006 61.111 14.65 0.00 0.00 4.30
3046 9598 1.676967 CTTGCAAGCACTCCCTCCC 60.677 63.158 14.65 0.00 0.00 4.30
3047 9599 2.134630 CTTGCAAGCACTCCCTCCCT 62.135 60.000 14.65 0.00 0.00 4.20
3048 9600 1.719063 TTGCAAGCACTCCCTCCCTT 61.719 55.000 0.00 0.00 0.00 3.95
3049 9601 1.377856 GCAAGCACTCCCTCCCTTC 60.378 63.158 0.00 0.00 0.00 3.46
3050 9602 1.301293 CAAGCACTCCCTCCCTTCC 59.699 63.158 0.00 0.00 0.00 3.46
3051 9603 1.162085 AAGCACTCCCTCCCTTCCT 59.838 57.895 0.00 0.00 0.00 3.36
3052 9604 0.417841 AAGCACTCCCTCCCTTCCTA 59.582 55.000 0.00 0.00 0.00 2.94
3053 9605 0.417841 AGCACTCCCTCCCTTCCTAA 59.582 55.000 0.00 0.00 0.00 2.69
3054 9606 1.203440 AGCACTCCCTCCCTTCCTAAA 60.203 52.381 0.00 0.00 0.00 1.85
3055 9607 1.847088 GCACTCCCTCCCTTCCTAAAT 59.153 52.381 0.00 0.00 0.00 1.40
3056 9608 3.046374 GCACTCCCTCCCTTCCTAAATA 58.954 50.000 0.00 0.00 0.00 1.40
3057 9609 3.181453 GCACTCCCTCCCTTCCTAAATAC 60.181 52.174 0.00 0.00 0.00 1.89
3058 9610 4.299485 CACTCCCTCCCTTCCTAAATACT 58.701 47.826 0.00 0.00 0.00 2.12
3059 9611 4.345547 CACTCCCTCCCTTCCTAAATACTC 59.654 50.000 0.00 0.00 0.00 2.59
3060 9612 3.904965 CTCCCTCCCTTCCTAAATACTCC 59.095 52.174 0.00 0.00 0.00 3.85
3061 9613 2.980379 CCCTCCCTTCCTAAATACTCCC 59.020 54.545 0.00 0.00 0.00 4.30
3062 9614 3.376555 CCCTCCCTTCCTAAATACTCCCT 60.377 52.174 0.00 0.00 0.00 4.20
3063 9615 3.904965 CCTCCCTTCCTAAATACTCCCTC 59.095 52.174 0.00 0.00 0.00 4.30
3064 9616 3.904965 CTCCCTTCCTAAATACTCCCTCC 59.095 52.174 0.00 0.00 0.00 4.30
3065 9617 2.633481 CCCTTCCTAAATACTCCCTCCG 59.367 54.545 0.00 0.00 0.00 4.63
3066 9618 3.306613 CCTTCCTAAATACTCCCTCCGT 58.693 50.000 0.00 0.00 0.00 4.69
3067 9619 3.321396 CCTTCCTAAATACTCCCTCCGTC 59.679 52.174 0.00 0.00 0.00 4.79
3068 9620 3.967467 TCCTAAATACTCCCTCCGTCT 57.033 47.619 0.00 0.00 0.00 4.18
3069 9621 3.830121 TCCTAAATACTCCCTCCGTCTC 58.170 50.000 0.00 0.00 0.00 3.36
3070 9622 3.462579 TCCTAAATACTCCCTCCGTCTCT 59.537 47.826 0.00 0.00 0.00 3.10
3071 9623 4.662179 TCCTAAATACTCCCTCCGTCTCTA 59.338 45.833 0.00 0.00 0.00 2.43
3072 9624 4.761227 CCTAAATACTCCCTCCGTCTCTAC 59.239 50.000 0.00 0.00 0.00 2.59
3073 9625 3.947612 AATACTCCCTCCGTCTCTACA 57.052 47.619 0.00 0.00 0.00 2.74
3074 9626 4.456662 AATACTCCCTCCGTCTCTACAT 57.543 45.455 0.00 0.00 0.00 2.29
3075 9627 5.579753 AATACTCCCTCCGTCTCTACATA 57.420 43.478 0.00 0.00 0.00 2.29
3076 9628 3.947612 ACTCCCTCCGTCTCTACATAA 57.052 47.619 0.00 0.00 0.00 1.90
3077 9629 3.822940 ACTCCCTCCGTCTCTACATAAG 58.177 50.000 0.00 0.00 0.00 1.73
3078 9630 3.202595 ACTCCCTCCGTCTCTACATAAGT 59.797 47.826 0.00 0.00 0.00 2.24
3079 9631 3.552875 TCCCTCCGTCTCTACATAAGTG 58.447 50.000 0.00 0.00 0.00 3.16
3080 9632 3.053842 TCCCTCCGTCTCTACATAAGTGT 60.054 47.826 0.00 0.00 42.39 3.55
3081 9633 3.315749 CCCTCCGTCTCTACATAAGTGTC 59.684 52.174 0.00 0.00 39.77 3.67
3082 9634 4.200874 CCTCCGTCTCTACATAAGTGTCT 58.799 47.826 0.00 0.00 39.77 3.41
3083 9635 4.273969 CCTCCGTCTCTACATAAGTGTCTC 59.726 50.000 0.00 0.00 39.77 3.36
3084 9636 4.840271 TCCGTCTCTACATAAGTGTCTCA 58.160 43.478 0.00 0.00 39.77 3.27
3085 9637 5.250982 TCCGTCTCTACATAAGTGTCTCAA 58.749 41.667 0.00 0.00 39.77 3.02
3086 9638 5.123502 TCCGTCTCTACATAAGTGTCTCAAC 59.876 44.000 0.00 0.00 39.77 3.18
3087 9639 5.124138 CCGTCTCTACATAAGTGTCTCAACT 59.876 44.000 0.00 0.00 39.77 3.16
3088 9640 6.349445 CCGTCTCTACATAAGTGTCTCAACTT 60.349 42.308 0.00 0.00 42.89 2.66
3089 9641 7.085116 CGTCTCTACATAAGTGTCTCAACTTT 58.915 38.462 0.00 0.00 40.77 2.66
3090 9642 7.061210 CGTCTCTACATAAGTGTCTCAACTTTG 59.939 40.741 0.00 0.00 40.77 2.77
3091 9643 7.868415 GTCTCTACATAAGTGTCTCAACTTTGT 59.132 37.037 0.00 3.43 40.77 2.83
3092 9644 9.074576 TCTCTACATAAGTGTCTCAACTTTGTA 57.925 33.333 0.00 4.25 40.77 2.41
3093 9645 9.862371 CTCTACATAAGTGTCTCAACTTTGTAT 57.138 33.333 0.00 0.00 40.77 2.29
3102 9654 9.915629 AGTGTCTCAACTTTGTATTAACTCTAG 57.084 33.333 0.00 0.00 0.00 2.43
3103 9655 9.694137 GTGTCTCAACTTTGTATTAACTCTAGT 57.306 33.333 0.00 0.00 0.00 2.57
3118 9670 6.712179 AACTCTAGTATAAAGTTCCCTCCG 57.288 41.667 0.00 0.00 0.00 4.63
3119 9671 4.583907 ACTCTAGTATAAAGTTCCCTCCGC 59.416 45.833 0.00 0.00 0.00 5.54
3120 9672 3.893813 TCTAGTATAAAGTTCCCTCCGCC 59.106 47.826 0.00 0.00 0.00 6.13
3121 9673 2.760581 AGTATAAAGTTCCCTCCGCCT 58.239 47.619 0.00 0.00 0.00 5.52
3122 9674 2.434702 AGTATAAAGTTCCCTCCGCCTG 59.565 50.000 0.00 0.00 0.00 4.85
3123 9675 1.580059 ATAAAGTTCCCTCCGCCTGA 58.420 50.000 0.00 0.00 0.00 3.86
3124 9676 1.354101 TAAAGTTCCCTCCGCCTGAA 58.646 50.000 0.00 0.00 0.00 3.02
3125 9677 0.476771 AAAGTTCCCTCCGCCTGAAA 59.523 50.000 0.00 0.00 0.00 2.69
3126 9678 0.476771 AAGTTCCCTCCGCCTGAAAA 59.523 50.000 0.00 0.00 0.00 2.29
3127 9679 0.698818 AGTTCCCTCCGCCTGAAAAT 59.301 50.000 0.00 0.00 0.00 1.82
3128 9680 1.913419 AGTTCCCTCCGCCTGAAAATA 59.087 47.619 0.00 0.00 0.00 1.40
3129 9681 2.014857 GTTCCCTCCGCCTGAAAATAC 58.985 52.381 0.00 0.00 0.00 1.89
3130 9682 1.580059 TCCCTCCGCCTGAAAATACT 58.420 50.000 0.00 0.00 0.00 2.12
3131 9683 1.913419 TCCCTCCGCCTGAAAATACTT 59.087 47.619 0.00 0.00 0.00 2.24
3132 9684 2.017049 CCCTCCGCCTGAAAATACTTG 58.983 52.381 0.00 0.00 0.00 3.16
3133 9685 2.618045 CCCTCCGCCTGAAAATACTTGT 60.618 50.000 0.00 0.00 0.00 3.16
3134 9686 2.678336 CCTCCGCCTGAAAATACTTGTC 59.322 50.000 0.00 0.00 0.00 3.18
3135 9687 2.678336 CTCCGCCTGAAAATACTTGTCC 59.322 50.000 0.00 0.00 0.00 4.02
3136 9688 2.304761 TCCGCCTGAAAATACTTGTCCT 59.695 45.455 0.00 0.00 0.00 3.85
3137 9689 3.516300 TCCGCCTGAAAATACTTGTCCTA 59.484 43.478 0.00 0.00 0.00 2.94
3138 9690 3.621715 CCGCCTGAAAATACTTGTCCTAC 59.378 47.826 0.00 0.00 0.00 3.18
3139 9691 4.250464 CGCCTGAAAATACTTGTCCTACA 58.750 43.478 0.00 0.00 0.00 2.74
3140 9692 4.693566 CGCCTGAAAATACTTGTCCTACAA 59.306 41.667 0.00 0.00 36.54 2.41
3141 9693 5.180492 CGCCTGAAAATACTTGTCCTACAAA 59.820 40.000 0.00 0.00 37.69 2.83
3142 9694 6.128007 CGCCTGAAAATACTTGTCCTACAAAT 60.128 38.462 0.00 0.00 37.69 2.32
3143 9695 7.029563 GCCTGAAAATACTTGTCCTACAAATG 58.970 38.462 0.00 0.00 37.69 2.32
3144 9696 7.538575 CCTGAAAATACTTGTCCTACAAATGG 58.461 38.462 0.00 0.00 37.69 3.16
3145 9697 7.176690 CCTGAAAATACTTGTCCTACAAATGGT 59.823 37.037 0.00 0.00 37.69 3.55
3146 9698 8.472007 TGAAAATACTTGTCCTACAAATGGTT 57.528 30.769 0.00 0.00 37.69 3.67
3147 9699 8.356657 TGAAAATACTTGTCCTACAAATGGTTG 58.643 33.333 0.00 0.00 37.69 3.77
3149 9701 8.927675 AAATACTTGTCCTACAAATGGTTGTA 57.072 30.769 0.00 0.00 46.33 2.41
3150 9702 9.528489 AAATACTTGTCCTACAAATGGTTGTAT 57.472 29.630 0.10 0.00 46.57 2.29
3151 9703 8.732746 ATACTTGTCCTACAAATGGTTGTATC 57.267 34.615 0.10 0.00 46.57 2.24
3152 9704 6.779860 ACTTGTCCTACAAATGGTTGTATCT 58.220 36.000 0.10 0.00 46.57 1.98
3153 9705 7.913789 ACTTGTCCTACAAATGGTTGTATCTA 58.086 34.615 0.10 0.00 46.57 1.98
3154 9706 8.041323 ACTTGTCCTACAAATGGTTGTATCTAG 58.959 37.037 0.10 0.00 46.57 2.43
3155 9707 7.727578 TGTCCTACAAATGGTTGTATCTAGA 57.272 36.000 0.00 0.00 46.57 2.43
3156 9708 7.553334 TGTCCTACAAATGGTTGTATCTAGAC 58.447 38.462 0.00 6.20 46.57 2.59
3157 9709 7.399191 TGTCCTACAAATGGTTGTATCTAGACT 59.601 37.037 0.00 0.00 46.57 3.24
3158 9710 8.258708 GTCCTACAAATGGTTGTATCTAGACTT 58.741 37.037 0.00 0.00 46.57 3.01
3159 9711 9.483489 TCCTACAAATGGTTGTATCTAGACTTA 57.517 33.333 0.00 0.00 46.57 2.24
3204 9756 9.300681 TCATTTTCAATCATTTCTAGGACAAGT 57.699 29.630 0.00 0.00 0.00 3.16
3210 9762 9.396022 TCAATCATTTCTAGGACAAGTATTTCC 57.604 33.333 0.00 0.00 0.00 3.13
3211 9763 8.338259 CAATCATTTCTAGGACAAGTATTTCCG 58.662 37.037 0.00 0.00 36.95 4.30
3212 9764 6.346096 TCATTTCTAGGACAAGTATTTCCGG 58.654 40.000 0.00 0.00 36.95 5.14
3213 9765 6.155565 TCATTTCTAGGACAAGTATTTCCGGA 59.844 38.462 0.00 0.00 36.95 5.14
3214 9766 4.996788 TCTAGGACAAGTATTTCCGGAC 57.003 45.455 1.83 0.00 36.95 4.79
3215 9767 2.667473 AGGACAAGTATTTCCGGACG 57.333 50.000 1.83 0.00 36.95 4.79
3216 9768 1.206371 AGGACAAGTATTTCCGGACGG 59.794 52.381 1.83 3.96 36.95 4.79
3217 9769 1.205417 GGACAAGTATTTCCGGACGGA 59.795 52.381 1.83 9.76 43.52 4.69
3218 9770 2.537401 GACAAGTATTTCCGGACGGAG 58.463 52.381 13.64 3.15 46.06 4.63
3219 9771 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
3220 9772 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
3221 9773 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
3222 9774 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
3223 9775 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
3224 9776 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
3225 9777 0.967380 TTTCCGGACGGAGGGAGTAC 60.967 60.000 13.64 0.00 46.06 2.73
3226 9778 1.856539 TTCCGGACGGAGGGAGTACT 61.857 60.000 13.64 0.00 46.06 2.73
3227 9779 0.982852 TCCGGACGGAGGGAGTACTA 60.983 60.000 9.76 0.00 39.76 1.82
3228 9780 0.107017 CCGGACGGAGGGAGTACTAA 60.107 60.000 4.40 0.00 37.50 2.24
3229 9781 1.307097 CGGACGGAGGGAGTACTAAG 58.693 60.000 0.00 0.00 0.00 2.18
3230 9782 1.031235 GGACGGAGGGAGTACTAAGC 58.969 60.000 0.00 0.00 0.00 3.09
3231 9783 1.409942 GGACGGAGGGAGTACTAAGCT 60.410 57.143 0.00 0.00 0.00 3.74
3232 9784 2.377073 GACGGAGGGAGTACTAAGCTT 58.623 52.381 3.48 3.48 0.00 3.74
3233 9785 3.549794 GACGGAGGGAGTACTAAGCTTA 58.450 50.000 5.94 5.94 0.00 3.09
3234 9786 3.950395 GACGGAGGGAGTACTAAGCTTAA 59.050 47.826 7.74 0.00 0.00 1.85
3235 9787 3.952967 ACGGAGGGAGTACTAAGCTTAAG 59.047 47.826 7.74 0.00 0.00 1.85
3236 9788 4.205587 CGGAGGGAGTACTAAGCTTAAGA 58.794 47.826 6.67 0.00 0.00 2.10
3237 9789 4.036616 CGGAGGGAGTACTAAGCTTAAGAC 59.963 50.000 6.67 8.29 0.00 3.01
3238 9790 4.954826 GGAGGGAGTACTAAGCTTAAGACA 59.045 45.833 6.67 0.00 0.00 3.41
3239 9791 5.163530 GGAGGGAGTACTAAGCTTAAGACAC 60.164 48.000 6.67 6.92 0.00 3.67
3240 9792 5.581975 AGGGAGTACTAAGCTTAAGACACT 58.418 41.667 6.67 7.93 0.00 3.55
3241 9793 6.017830 AGGGAGTACTAAGCTTAAGACACTT 58.982 40.000 6.67 2.91 0.00 3.16
3242 9794 7.180663 AGGGAGTACTAAGCTTAAGACACTTA 58.819 38.462 6.67 3.97 0.00 2.24
3243 9795 7.840210 AGGGAGTACTAAGCTTAAGACACTTAT 59.160 37.037 6.67 0.00 0.00 1.73
3244 9796 8.476447 GGGAGTACTAAGCTTAAGACACTTATT 58.524 37.037 6.67 2.15 0.00 1.40
3245 9797 9.872721 GGAGTACTAAGCTTAAGACACTTATTT 57.127 33.333 6.67 0.00 0.00 1.40
3249 9801 8.336801 ACTAAGCTTAAGACACTTATTTTGGG 57.663 34.615 6.67 0.00 0.00 4.12
3250 9802 8.161425 ACTAAGCTTAAGACACTTATTTTGGGA 58.839 33.333 6.67 0.00 0.00 4.37
3251 9803 6.819397 AGCTTAAGACACTTATTTTGGGAC 57.181 37.500 6.67 0.00 0.00 4.46
3252 9804 5.411669 AGCTTAAGACACTTATTTTGGGACG 59.588 40.000 6.67 0.00 0.00 4.79
3253 9805 5.391629 GCTTAAGACACTTATTTTGGGACGG 60.392 44.000 6.67 0.00 0.00 4.79
3254 9806 4.360951 AAGACACTTATTTTGGGACGGA 57.639 40.909 0.00 0.00 0.00 4.69
3255 9807 3.939066 AGACACTTATTTTGGGACGGAG 58.061 45.455 0.00 0.00 0.00 4.63
3256 9808 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
3257 9809 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
3258 9810 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
3259 9811 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
3260 9812 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
3261 9813 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
3262 9814 1.961133 TTTTGGGACGGAGGGAGTAT 58.039 50.000 0.00 0.00 0.00 2.12
3263 9815 2.852714 TTTGGGACGGAGGGAGTATA 57.147 50.000 0.00 0.00 0.00 1.47
3264 9816 3.339713 TTTGGGACGGAGGGAGTATAT 57.660 47.619 0.00 0.00 0.00 0.86
3265 9817 2.304221 TGGGACGGAGGGAGTATATG 57.696 55.000 0.00 0.00 0.00 1.78
3266 9818 1.502039 TGGGACGGAGGGAGTATATGT 59.498 52.381 0.00 0.00 0.00 2.29
3267 9819 2.169330 GGGACGGAGGGAGTATATGTC 58.831 57.143 0.00 0.00 0.00 3.06
3268 9820 2.225066 GGGACGGAGGGAGTATATGTCT 60.225 54.545 0.00 0.00 0.00 3.41
3269 9821 3.498334 GGACGGAGGGAGTATATGTCTT 58.502 50.000 0.00 0.00 0.00 3.01
3270 9822 3.896272 GGACGGAGGGAGTATATGTCTTT 59.104 47.826 0.00 0.00 0.00 2.52
3271 9823 4.344390 GGACGGAGGGAGTATATGTCTTTT 59.656 45.833 0.00 0.00 0.00 2.27
3272 9824 5.163332 GGACGGAGGGAGTATATGTCTTTTT 60.163 44.000 0.00 0.00 0.00 1.94
3273 9825 6.041296 GGACGGAGGGAGTATATGTCTTTTTA 59.959 42.308 0.00 0.00 0.00 1.52
3274 9826 7.052142 ACGGAGGGAGTATATGTCTTTTTAG 57.948 40.000 0.00 0.00 0.00 1.85
3275 9827 6.837568 ACGGAGGGAGTATATGTCTTTTTAGA 59.162 38.462 0.00 0.00 0.00 2.10
3276 9828 7.014422 ACGGAGGGAGTATATGTCTTTTTAGAG 59.986 40.741 0.00 0.00 0.00 2.43
3277 9829 7.230913 CGGAGGGAGTATATGTCTTTTTAGAGA 59.769 40.741 0.00 0.00 0.00 3.10
3278 9830 9.095700 GGAGGGAGTATATGTCTTTTTAGAGAT 57.904 37.037 0.00 0.00 0.00 2.75
3281 9833 9.713713 GGGAGTATATGTCTTTTTAGAGATTCC 57.286 37.037 0.00 0.00 0.00 3.01
3498 10050 7.040478 TGTGAGTTCATCCTGTATTTTTCTTGG 60.040 37.037 0.00 0.00 0.00 3.61
3504 10056 8.359875 TCATCCTGTATTTTTCTTGGCAATAA 57.640 30.769 0.00 0.00 0.00 1.40
3548 10100 7.623630 TGACTAACATTCCAGATCAAATCTCA 58.376 34.615 0.00 0.00 37.58 3.27
3549 10101 8.102676 TGACTAACATTCCAGATCAAATCTCAA 58.897 33.333 0.00 0.00 37.58 3.02
3550 10102 8.503458 ACTAACATTCCAGATCAAATCTCAAG 57.497 34.615 0.00 0.00 37.58 3.02
3760 11347 5.211174 TGATGGCAGATCAATGACTAGAG 57.789 43.478 0.00 0.00 0.00 2.43
3810 11398 5.309282 ACCAATTCCTTCCAAGCCAAATTAA 59.691 36.000 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.737236 GCATCACGTCCATAGCAACAA 59.263 47.619 0.00 0.00 0.00 2.83
2 3 1.368641 GCATCACGTCCATAGCAACA 58.631 50.000 0.00 0.00 0.00 3.33
3 4 0.657840 GGCATCACGTCCATAGCAAC 59.342 55.000 0.00 0.00 0.00 4.17
4 5 0.251634 TGGCATCACGTCCATAGCAA 59.748 50.000 0.00 0.00 0.00 3.91
5 6 0.461870 GTGGCATCACGTCCATAGCA 60.462 55.000 0.00 0.00 34.47 3.49
6 7 1.160329 GGTGGCATCACGTCCATAGC 61.160 60.000 0.00 0.00 44.50 2.97
7 8 0.875908 CGGTGGCATCACGTCCATAG 60.876 60.000 0.00 0.00 44.50 2.23
8 9 1.142965 CGGTGGCATCACGTCCATA 59.857 57.895 0.00 0.00 44.50 2.74
9 10 2.125147 CGGTGGCATCACGTCCAT 60.125 61.111 0.00 0.00 44.50 3.41
10 11 3.307108 TCGGTGGCATCACGTCCA 61.307 61.111 0.00 0.00 44.50 4.02
11 12 2.813908 GTCGGTGGCATCACGTCC 60.814 66.667 0.00 0.00 44.50 4.79
12 13 2.048597 TGTCGGTGGCATCACGTC 60.049 61.111 0.00 0.00 44.50 4.34
13 14 1.529152 TAGTGTCGGTGGCATCACGT 61.529 55.000 0.00 0.00 44.50 4.49
14 15 0.802222 CTAGTGTCGGTGGCATCACG 60.802 60.000 0.00 0.33 44.50 4.35
15 16 0.246635 ACTAGTGTCGGTGGCATCAC 59.753 55.000 0.00 3.00 42.91 3.06
16 17 0.973632 AACTAGTGTCGGTGGCATCA 59.026 50.000 0.00 0.00 0.00 3.07
17 18 2.094762 AAACTAGTGTCGGTGGCATC 57.905 50.000 0.00 0.00 0.00 3.91
18 19 3.055385 ACATAAACTAGTGTCGGTGGCAT 60.055 43.478 0.00 0.00 0.00 4.40
19 20 2.300723 ACATAAACTAGTGTCGGTGGCA 59.699 45.455 0.00 0.00 0.00 4.92
20 21 2.928116 GACATAAACTAGTGTCGGTGGC 59.072 50.000 0.00 0.00 35.85 5.01
21 22 4.182693 TGACATAAACTAGTGTCGGTGG 57.817 45.455 0.00 0.00 45.88 4.61
22 23 5.924254 TCTTTGACATAAACTAGTGTCGGTG 59.076 40.000 0.00 0.00 45.88 4.94
23 24 6.092955 TCTTTGACATAAACTAGTGTCGGT 57.907 37.500 0.00 0.00 45.88 4.69
24 25 5.577164 CCTCTTTGACATAAACTAGTGTCGG 59.423 44.000 0.00 0.00 45.88 4.79
25 26 6.157211 ACCTCTTTGACATAAACTAGTGTCG 58.843 40.000 0.00 0.00 45.88 4.35
26 27 9.088512 CATACCTCTTTGACATAAACTAGTGTC 57.911 37.037 0.00 0.00 43.81 3.67
27 28 8.041323 CCATACCTCTTTGACATAAACTAGTGT 58.959 37.037 0.00 0.00 0.00 3.55
28 29 7.495934 CCCATACCTCTTTGACATAAACTAGTG 59.504 40.741 0.00 0.00 0.00 2.74
29 30 7.365652 CCCCATACCTCTTTGACATAAACTAGT 60.366 40.741 0.00 0.00 0.00 2.57
30 31 6.992715 CCCCATACCTCTTTGACATAAACTAG 59.007 42.308 0.00 0.00 0.00 2.57
31 32 6.634039 GCCCCATACCTCTTTGACATAAACTA 60.634 42.308 0.00 0.00 0.00 2.24
32 33 5.755849 CCCCATACCTCTTTGACATAAACT 58.244 41.667 0.00 0.00 0.00 2.66
33 34 4.338400 GCCCCATACCTCTTTGACATAAAC 59.662 45.833 0.00 0.00 0.00 2.01
34 35 4.017958 TGCCCCATACCTCTTTGACATAAA 60.018 41.667 0.00 0.00 0.00 1.40
35 36 3.525609 TGCCCCATACCTCTTTGACATAA 59.474 43.478 0.00 0.00 0.00 1.90
36 37 3.118038 GTGCCCCATACCTCTTTGACATA 60.118 47.826 0.00 0.00 0.00 2.29
37 38 1.922447 TGCCCCATACCTCTTTGACAT 59.078 47.619 0.00 0.00 0.00 3.06
38 39 1.004277 GTGCCCCATACCTCTTTGACA 59.996 52.381 0.00 0.00 0.00 3.58
39 40 1.751437 GTGCCCCATACCTCTTTGAC 58.249 55.000 0.00 0.00 0.00 3.18
40 41 0.251916 CGTGCCCCATACCTCTTTGA 59.748 55.000 0.00 0.00 0.00 2.69
41 42 0.251916 TCGTGCCCCATACCTCTTTG 59.748 55.000 0.00 0.00 0.00 2.77
42 43 0.988832 TTCGTGCCCCATACCTCTTT 59.011 50.000 0.00 0.00 0.00 2.52
43 44 0.988832 TTTCGTGCCCCATACCTCTT 59.011 50.000 0.00 0.00 0.00 2.85
44 45 0.541863 CTTTCGTGCCCCATACCTCT 59.458 55.000 0.00 0.00 0.00 3.69
45 46 0.463833 CCTTTCGTGCCCCATACCTC 60.464 60.000 0.00 0.00 0.00 3.85
46 47 1.607612 CCTTTCGTGCCCCATACCT 59.392 57.895 0.00 0.00 0.00 3.08
47 48 2.119029 GCCTTTCGTGCCCCATACC 61.119 63.158 0.00 0.00 0.00 2.73
48 49 2.119029 GGCCTTTCGTGCCCCATAC 61.119 63.158 0.00 0.00 43.33 2.39
49 50 2.274104 GGCCTTTCGTGCCCCATA 59.726 61.111 0.00 0.00 43.33 2.74
55 56 0.741221 CAGTAGAGGGCCTTTCGTGC 60.741 60.000 7.89 0.00 0.00 5.34
56 57 0.741221 GCAGTAGAGGGCCTTTCGTG 60.741 60.000 7.89 4.25 0.00 4.35
57 58 0.905337 AGCAGTAGAGGGCCTTTCGT 60.905 55.000 7.89 0.00 0.00 3.85
58 59 1.112113 TAGCAGTAGAGGGCCTTTCG 58.888 55.000 7.89 0.00 0.00 3.46
59 60 2.700897 TGATAGCAGTAGAGGGCCTTTC 59.299 50.000 7.89 0.41 0.00 2.62
60 61 2.703007 CTGATAGCAGTAGAGGGCCTTT 59.297 50.000 7.89 4.05 37.37 3.11
61 62 2.324541 CTGATAGCAGTAGAGGGCCTT 58.675 52.381 7.89 0.00 37.37 4.35
62 63 2.008242 CTGATAGCAGTAGAGGGCCT 57.992 55.000 5.25 5.25 37.37 5.19
63 64 0.320050 GCTGATAGCAGTAGAGGGCC 59.680 60.000 10.15 0.00 44.17 5.80
64 65 3.904586 GCTGATAGCAGTAGAGGGC 57.095 57.895 10.15 0.00 44.17 5.19
82 83 3.203040 ACCCAATCTCCCCATACTTCTTG 59.797 47.826 0.00 0.00 0.00 3.02
105 106 1.609580 CCCGTGGGATTCGACAAGAAA 60.610 52.381 0.00 0.00 42.91 2.52
107 108 1.594833 CCCGTGGGATTCGACAAGA 59.405 57.895 0.00 0.00 37.50 3.02
121 122 2.430367 GAGTTCAAGCCACCCCGT 59.570 61.111 0.00 0.00 0.00 5.28
126 127 1.251251 ATTGCAGGAGTTCAAGCCAC 58.749 50.000 0.00 0.00 0.00 5.01
133 134 4.853924 TGGAAAGAAATTGCAGGAGTTC 57.146 40.909 0.00 0.00 34.05 3.01
164 165 0.681733 AGGACAATCACGCACTCAGT 59.318 50.000 0.00 0.00 0.00 3.41
170 171 2.422597 CTTGGTAAGGACAATCACGCA 58.577 47.619 0.00 0.00 0.00 5.24
171 172 1.130561 GCTTGGTAAGGACAATCACGC 59.869 52.381 0.00 0.00 0.00 5.34
176 177 4.263462 TGTCATGAGCTTGGTAAGGACAAT 60.263 41.667 0.00 0.00 31.75 2.71
177 178 3.072330 TGTCATGAGCTTGGTAAGGACAA 59.928 43.478 0.00 0.00 31.75 3.18
179 180 3.334583 TGTCATGAGCTTGGTAAGGAC 57.665 47.619 0.00 0.00 0.00 3.85
191 192 6.118170 AGAAGTGGGTTGATATTGTCATGAG 58.882 40.000 0.00 0.00 36.54 2.90
203 204 4.403734 GGGTTCATTAAGAAGTGGGTTGA 58.596 43.478 0.00 0.00 36.78 3.18
218 219 1.819305 GCAGGCGATAATGGGGTTCAT 60.819 52.381 0.00 0.00 37.79 2.57
227 228 4.460263 TGGAATTACTTGCAGGCGATAAT 58.540 39.130 0.00 0.00 0.00 1.28
235 236 9.241317 GACATAATTGAATGGAATTACTTGCAG 57.759 33.333 0.00 0.00 36.07 4.41
244 245 8.716674 AAGCCTATGACATAATTGAATGGAAT 57.283 30.769 0.00 0.00 0.00 3.01
246 247 8.537728 AAAAGCCTATGACATAATTGAATGGA 57.462 30.769 0.00 0.00 0.00 3.41
258 259 9.851686 AACTTGATATGATAAAAGCCTATGACA 57.148 29.630 0.00 0.00 0.00 3.58
273 274 9.295825 ACTGTTGTCCATTAAAACTTGATATGA 57.704 29.630 0.00 0.00 0.00 2.15
275 276 8.028938 GCACTGTTGTCCATTAAAACTTGATAT 58.971 33.333 0.00 0.00 0.00 1.63
276 277 7.367285 GCACTGTTGTCCATTAAAACTTGATA 58.633 34.615 0.00 0.00 0.00 2.15
279 280 4.744631 GGCACTGTTGTCCATTAAAACTTG 59.255 41.667 0.00 0.00 0.00 3.16
282 283 4.546570 GAGGCACTGTTGTCCATTAAAAC 58.453 43.478 0.00 0.00 41.55 2.43
284 285 3.153919 GGAGGCACTGTTGTCCATTAAA 58.846 45.455 0.00 0.00 41.55 1.52
285 286 2.107378 TGGAGGCACTGTTGTCCATTAA 59.893 45.455 0.00 0.00 41.55 1.40
287 288 0.478072 TGGAGGCACTGTTGTCCATT 59.522 50.000 0.00 0.00 41.55 3.16
289 290 1.148273 GTGGAGGCACTGTTGTCCA 59.852 57.895 0.00 0.00 41.55 4.02
291 292 1.680338 AAAGTGGAGGCACTGTTGTC 58.320 50.000 0.00 0.00 41.55 3.18
295 766 2.026822 CCTCATAAAGTGGAGGCACTGT 60.027 50.000 0.00 0.00 43.80 3.55
308 779 7.120923 ACTACGCCTTATTTCTCCTCATAAA 57.879 36.000 0.00 0.00 0.00 1.40
309 780 6.726490 ACTACGCCTTATTTCTCCTCATAA 57.274 37.500 0.00 0.00 0.00 1.90
311 782 5.834204 ACTACTACGCCTTATTTCTCCTCAT 59.166 40.000 0.00 0.00 0.00 2.90
312 783 5.198965 ACTACTACGCCTTATTTCTCCTCA 58.801 41.667 0.00 0.00 0.00 3.86
313 784 5.771153 ACTACTACGCCTTATTTCTCCTC 57.229 43.478 0.00 0.00 0.00 3.71
314 785 6.363882 ACTACTACTACGCCTTATTTCTCCT 58.636 40.000 0.00 0.00 0.00 3.69
315 786 6.631971 ACTACTACTACGCCTTATTTCTCC 57.368 41.667 0.00 0.00 0.00 3.71
316 787 8.376889 ACTACTACTACTACGCCTTATTTCTC 57.623 38.462 0.00 0.00 0.00 2.87
319 790 9.620259 AGTTACTACTACTACTACGCCTTATTT 57.380 33.333 0.00 0.00 31.21 1.40
320 791 9.267084 GAGTTACTACTACTACTACGCCTTATT 57.733 37.037 0.00 0.00 33.84 1.40
322 793 7.923344 CAGAGTTACTACTACTACTACGCCTTA 59.077 40.741 0.00 0.00 33.84 2.69
323 794 6.760770 CAGAGTTACTACTACTACTACGCCTT 59.239 42.308 0.00 0.00 33.84 4.35
324 795 6.097554 TCAGAGTTACTACTACTACTACGCCT 59.902 42.308 0.00 0.00 33.84 5.52
326 797 7.514435 CGTTCAGAGTTACTACTACTACTACGC 60.514 44.444 0.00 0.00 33.84 4.42
327 798 7.698550 TCGTTCAGAGTTACTACTACTACTACG 59.301 40.741 0.00 0.00 33.84 3.51
328 799 8.918961 TCGTTCAGAGTTACTACTACTACTAC 57.081 38.462 0.00 0.00 33.84 2.73
348 1238 0.803380 GCAATGCCCAATGCTCGTTC 60.803 55.000 0.00 0.00 42.00 3.95
354 1244 1.205417 ACAACTAGCAATGCCCAATGC 59.795 47.619 0.00 0.14 42.87 3.56
358 1248 0.539207 TGCACAACTAGCAATGCCCA 60.539 50.000 0.00 0.00 39.39 5.36
359 1249 0.109132 GTGCACAACTAGCAATGCCC 60.109 55.000 13.17 0.00 44.64 5.36
364 1254 2.258013 GCCCGTGCACAACTAGCAA 61.258 57.895 18.64 0.00 44.64 3.91
366 1256 2.668212 TGCCCGTGCACAACTAGC 60.668 61.111 18.64 11.67 44.23 3.42
521 2073 5.107837 CCGCGTAAGATCAATGACATAAGAC 60.108 44.000 4.92 0.00 43.02 3.01
524 2076 4.939271 TCCGCGTAAGATCAATGACATAA 58.061 39.130 4.92 0.00 43.02 1.90
577 3187 6.875195 ACACAATCAAGCATAAAATGGAAAGG 59.125 34.615 0.00 0.00 0.00 3.11
659 4792 9.225436 CCAAAAGCAAATAAAAGGCCTATTTAA 57.775 29.630 5.16 0.00 29.79 1.52
660 4793 7.826744 CCCAAAAGCAAATAAAAGGCCTATTTA 59.173 33.333 5.16 13.58 29.79 1.40
661 4794 6.658816 CCCAAAAGCAAATAAAAGGCCTATTT 59.341 34.615 5.16 11.72 30.72 1.40
662 4795 6.179756 CCCAAAAGCAAATAAAAGGCCTATT 58.820 36.000 5.16 0.00 0.00 1.73
664 4797 4.564613 GCCCAAAAGCAAATAAAAGGCCTA 60.565 41.667 5.16 0.00 31.59 3.93
666 4799 2.487762 GCCCAAAAGCAAATAAAAGGCC 59.512 45.455 0.00 0.00 31.59 5.19
667 4800 2.487762 GGCCCAAAAGCAAATAAAAGGC 59.512 45.455 0.00 0.00 37.14 4.35
668 4801 3.081061 GGGCCCAAAAGCAAATAAAAGG 58.919 45.455 19.95 0.00 0.00 3.11
670 4803 3.864789 TGGGCCCAAAAGCAAATAAAA 57.135 38.095 26.33 0.00 0.00 1.52
672 4805 3.840666 TGTATGGGCCCAAAAGCAAATAA 59.159 39.130 32.58 0.00 0.00 1.40
673 4806 3.445008 TGTATGGGCCCAAAAGCAAATA 58.555 40.909 32.58 11.46 0.00 1.40
675 4808 1.622811 CTGTATGGGCCCAAAAGCAAA 59.377 47.619 32.58 9.50 0.00 3.68
677 4810 1.257055 GCTGTATGGGCCCAAAAGCA 61.257 55.000 34.80 26.22 33.11 3.91
678 4811 0.972471 AGCTGTATGGGCCCAAAAGC 60.972 55.000 33.72 33.72 33.07 3.51
679 4812 1.560505 AAGCTGTATGGGCCCAAAAG 58.439 50.000 32.58 25.88 0.00 2.27
681 4814 1.356059 TGTAAGCTGTATGGGCCCAAA 59.644 47.619 32.58 16.98 0.00 3.28
682 4815 0.995803 TGTAAGCTGTATGGGCCCAA 59.004 50.000 32.58 15.93 0.00 4.12
683 4816 0.995803 TTGTAAGCTGTATGGGCCCA 59.004 50.000 30.92 30.92 0.00 5.36
713 6618 6.783892 ACGGATCCATGAAAAATTGTTTTG 57.216 33.333 13.41 0.00 37.07 2.44
721 6626 5.180492 GTGTTCACTACGGATCCATGAAAAA 59.820 40.000 13.41 5.35 31.45 1.94
812 6717 2.308722 GCCCTTCCCCATGGAGTGA 61.309 63.158 15.22 3.69 43.07 3.41
883 6788 1.763770 CTGGTGACCAAGGAGCCTT 59.236 57.895 5.53 0.00 36.60 4.35
1099 7005 3.315769 CTCGCAGCAGTCGTCGTCT 62.316 63.158 0.00 0.00 0.00 4.18
1150 7056 1.699656 CGTCGGCTGATGCTTTGAGG 61.700 60.000 0.81 0.00 39.59 3.86
1192 7098 0.107800 GAGAACCTACCGGGCCTTTC 60.108 60.000 6.32 3.03 39.10 2.62
1211 7117 2.025416 TGGGAGGAAGAGAGAGTGAGAG 60.025 54.545 0.00 0.00 0.00 3.20
1658 7564 8.105829 AGAACAATTACTGATCTGAACTCCAAT 58.894 33.333 6.60 0.00 35.93 3.16
1751 7658 8.253113 GGTTCATGAATTTTACATCAGGTGAAT 58.747 33.333 12.12 0.00 31.19 2.57
1752 7659 7.232330 TGGTTCATGAATTTTACATCAGGTGAA 59.768 33.333 12.12 0.00 0.00 3.18
1753 7660 6.718912 TGGTTCATGAATTTTACATCAGGTGA 59.281 34.615 12.12 0.00 0.00 4.02
1755 7662 6.349280 CGTGGTTCATGAATTTTACATCAGGT 60.349 38.462 12.12 0.00 0.00 4.00
1756 7663 6.029607 CGTGGTTCATGAATTTTACATCAGG 58.970 40.000 12.12 0.00 0.00 3.86
1757 7664 6.029607 CCGTGGTTCATGAATTTTACATCAG 58.970 40.000 12.12 3.40 0.00 2.90
1808 7715 4.256920 CACCTTGACTTTGATCTACAGGG 58.743 47.826 0.00 0.00 34.63 4.45
1834 7741 1.609555 AGAATGCTCCGACCGATCTAC 59.390 52.381 0.00 0.00 0.00 2.59
1854 7761 3.494924 CGATGATAGGGATGGTTTCTGCA 60.495 47.826 0.00 0.00 0.00 4.41
1863 7770 2.290514 ACCATTGGCGATGATAGGGATG 60.291 50.000 16.49 0.00 38.03 3.51
1864 7771 1.988107 ACCATTGGCGATGATAGGGAT 59.012 47.619 16.49 0.00 38.03 3.85
1866 7773 3.417069 TTACCATTGGCGATGATAGGG 57.583 47.619 16.49 1.34 38.03 3.53
1867 7774 3.691118 CCATTACCATTGGCGATGATAGG 59.309 47.826 16.49 6.75 38.03 2.57
1868 7775 4.154737 CACCATTACCATTGGCGATGATAG 59.845 45.833 16.49 2.23 38.03 2.08
1870 7777 2.886523 CACCATTACCATTGGCGATGAT 59.113 45.455 16.49 0.64 38.03 2.45
1871 7778 2.296792 CACCATTACCATTGGCGATGA 58.703 47.619 16.49 0.00 38.03 2.92
1872 7779 1.337703 CCACCATTACCATTGGCGATG 59.662 52.381 7.81 7.81 37.81 3.84
1873 7780 1.691196 CCACCATTACCATTGGCGAT 58.309 50.000 1.54 0.00 37.81 4.58
1874 7781 1.034838 GCCACCATTACCATTGGCGA 61.035 55.000 1.54 0.00 44.88 5.54
1881 7788 1.304052 GTGCAGGCCACCATTACCA 60.304 57.895 5.01 0.00 38.55 3.25
1899 7806 2.040213 GATCACCAGCAATGCGTCCG 62.040 60.000 0.00 0.00 0.00 4.79
1932 7839 9.474920 GTAGGTTCATCTTCTTCAATCTCATAG 57.525 37.037 0.00 0.00 0.00 2.23
1934 7841 8.088463 AGTAGGTTCATCTTCTTCAATCTCAT 57.912 34.615 0.00 0.00 0.00 2.90
1935 7842 7.487822 AGTAGGTTCATCTTCTTCAATCTCA 57.512 36.000 0.00 0.00 0.00 3.27
1936 7843 9.691362 GATAGTAGGTTCATCTTCTTCAATCTC 57.309 37.037 0.00 0.00 0.00 2.75
2006 7913 4.767255 GCAGTGGCTCGACAGGGG 62.767 72.222 0.00 0.00 36.96 4.79
2067 7974 1.078759 GCTTGACCGGAGACATGTCG 61.079 60.000 19.85 9.24 35.20 4.35
2075 7982 2.027625 GGTTCACGCTTGACCGGAG 61.028 63.158 9.46 0.00 0.00 4.63
2076 7983 2.029964 GGTTCACGCTTGACCGGA 59.970 61.111 9.46 0.00 0.00 5.14
2082 7989 1.466167 CCATCTTCAGGTTCACGCTTG 59.534 52.381 0.00 0.00 0.00 4.01
2086 7993 1.522668 TTGCCATCTTCAGGTTCACG 58.477 50.000 0.00 0.00 0.00 4.35
2088 7995 2.225091 ACCATTGCCATCTTCAGGTTCA 60.225 45.455 0.00 0.00 0.00 3.18
2106 8013 1.372997 GAAGAGCTCGTTCGCACCA 60.373 57.895 8.37 0.00 0.00 4.17
2109 8016 2.261671 GGGAAGAGCTCGTTCGCA 59.738 61.111 24.60 0.00 36.96 5.10
2112 8019 2.070028 GTTTCAGGGAAGAGCTCGTTC 58.930 52.381 8.37 12.00 0.00 3.95
2113 8020 1.270893 GGTTTCAGGGAAGAGCTCGTT 60.271 52.381 8.37 2.98 0.00 3.85
2115 8022 0.321671 TGGTTTCAGGGAAGAGCTCG 59.678 55.000 8.37 0.00 0.00 5.03
2123 8030 0.991920 GTCAGGGATGGTTTCAGGGA 59.008 55.000 0.00 0.00 0.00 4.20
2124 8031 0.392998 CGTCAGGGATGGTTTCAGGG 60.393 60.000 0.00 0.00 0.00 4.45
2125 8032 0.324943 ACGTCAGGGATGGTTTCAGG 59.675 55.000 0.00 0.00 0.00 3.86
2131 8038 2.665000 CAGCACGTCAGGGATGGT 59.335 61.111 0.00 0.00 32.64 3.55
2139 8046 4.600576 TTCGGCAGCAGCACGTCA 62.601 61.111 2.65 0.00 44.61 4.35
2147 8054 2.738521 GAACGCTCTTCGGCAGCA 60.739 61.111 0.00 0.00 43.86 4.41
2149 8056 2.097038 CAGGAACGCTCTTCGGCAG 61.097 63.158 0.00 0.00 43.86 4.85
2154 8061 1.129437 GCAACATCAGGAACGCTCTTC 59.871 52.381 0.00 0.00 0.00 2.87
2157 8064 0.955428 TGGCAACATCAGGAACGCTC 60.955 55.000 0.00 0.00 46.17 5.03
2176 8085 1.347707 TCTTCAGGTTCGCCATTCACT 59.652 47.619 0.00 0.00 40.60 3.41
2182 8091 1.377202 GCCATCTTCAGGTTCGCCA 60.377 57.895 0.00 0.00 40.60 5.69
2183 8092 1.377202 TGCCATCTTCAGGTTCGCC 60.377 57.895 0.00 0.00 37.60 5.54
2211 8120 1.859703 CAGAGAGTTCATGCTCATCGC 59.140 52.381 3.57 0.00 37.94 4.58
2311 8220 1.486310 TCAGTCTCACACTTTGCCTGT 59.514 47.619 0.00 0.00 30.26 4.00
2336 8248 2.048023 CATCCACAGCACCGGCATT 61.048 57.895 0.00 0.00 44.61 3.56
2447 8359 0.316689 GTGCCACTGTTGTGCGTTAC 60.317 55.000 0.00 0.00 42.54 2.50
2478 8390 2.450476 CAGGGATGGTTTTCTCCTTGG 58.550 52.381 0.00 0.00 35.57 3.61
2499 8411 2.749044 ACTTCAGCAGCGGCATGG 60.749 61.111 12.44 0.00 44.61 3.66
2502 8414 2.357881 CAGACTTCAGCAGCGGCA 60.358 61.111 12.44 0.00 44.61 5.69
2559 8964 1.539388 CAGGTTTGTGCTTTATCGGCA 59.461 47.619 0.00 0.00 37.36 5.69
2585 8990 2.418976 CACACTCTTCAGCACCATGATG 59.581 50.000 0.00 0.00 34.61 3.07
2596 9001 2.554462 CTCTTCTCCGACACACTCTTCA 59.446 50.000 0.00 0.00 0.00 3.02
2599 9004 1.074084 TCCTCTTCTCCGACACACTCT 59.926 52.381 0.00 0.00 0.00 3.24
2603 9008 1.186200 CCATCCTCTTCTCCGACACA 58.814 55.000 0.00 0.00 0.00 3.72
2608 9013 2.297597 GTCATACCCATCCTCTTCTCCG 59.702 54.545 0.00 0.00 0.00 4.63
2638 9043 3.135348 CAGGGCTGAGTTTATCCATCTCA 59.865 47.826 0.00 0.00 36.85 3.27
2649 9054 1.627834 CTCTTCCTTCAGGGCTGAGTT 59.372 52.381 0.00 0.00 41.13 3.01
2670 9075 2.367241 TCACCGTCTTCCTCATCAAACA 59.633 45.455 0.00 0.00 0.00 2.83
2671 9076 2.737252 GTCACCGTCTTCCTCATCAAAC 59.263 50.000 0.00 0.00 0.00 2.93
2674 9079 0.526211 CGTCACCGTCTTCCTCATCA 59.474 55.000 0.00 0.00 0.00 3.07
2675 9080 0.809385 TCGTCACCGTCTTCCTCATC 59.191 55.000 0.00 0.00 35.01 2.92
2676 9081 0.526662 GTCGTCACCGTCTTCCTCAT 59.473 55.000 0.00 0.00 35.01 2.90
2680 9085 0.179205 CTACGTCGTCACCGTCTTCC 60.179 60.000 0.00 0.00 39.60 3.46
2693 9098 4.549458 TGTTTGGCTACTACAACTACGTC 58.451 43.478 0.00 0.00 0.00 4.34
2710 9115 2.544486 GCCAGTTCAAAGAGCCTGTTTG 60.544 50.000 7.96 7.96 36.42 2.93
2714 9119 1.613836 AAGCCAGTTCAAAGAGCCTG 58.386 50.000 0.00 0.00 0.00 4.85
2742 9147 4.928601 TCATTTCTCATTGCAAGCATAGC 58.071 39.130 4.94 0.00 0.00 2.97
2743 9148 6.504398 ACATCATTTCTCATTGCAAGCATAG 58.496 36.000 4.94 0.00 0.00 2.23
2754 9192 7.123098 TGTGGAGCATAAAACATCATTTCTCAT 59.877 33.333 0.00 0.00 0.00 2.90
2768 9206 9.158233 GTACTACTGTTATTTGTGGAGCATAAA 57.842 33.333 0.00 0.00 0.00 1.40
2772 9210 6.354794 AGTACTACTGTTATTTGTGGAGCA 57.645 37.500 0.00 0.00 0.00 4.26
2791 9229 8.703604 TCTGAATCATTTGCACTTAGTAGTAC 57.296 34.615 0.00 0.00 31.96 2.73
2793 9231 8.798859 AATCTGAATCATTTGCACTTAGTAGT 57.201 30.769 0.00 0.00 34.00 2.73
2795 9233 9.844790 CAAAATCTGAATCATTTGCACTTAGTA 57.155 29.630 0.00 0.00 0.00 1.82
2796 9234 8.362639 ACAAAATCTGAATCATTTGCACTTAGT 58.637 29.630 7.49 0.00 36.48 2.24
2803 9241 6.421501 TGTCACACAAAATCTGAATCATTTGC 59.578 34.615 7.49 0.00 36.48 3.68
2810 9248 7.148018 ACAGTTCTTGTCACACAAAATCTGAAT 60.148 33.333 15.10 0.00 37.69 2.57
2888 9326 7.448420 CACCTAGTTATTCATCATCATGGAGT 58.552 38.462 0.00 0.00 0.00 3.85
2901 9453 5.351740 GTCTTTCAGTGCCACCTAGTTATTC 59.648 44.000 0.00 0.00 0.00 1.75
2921 9473 1.826385 CCTTGGATGCGGAAAGTCTT 58.174 50.000 0.00 0.00 0.00 3.01
2922 9474 0.678048 GCCTTGGATGCGGAAAGTCT 60.678 55.000 0.00 0.00 0.00 3.24
2925 9477 1.508088 GTGCCTTGGATGCGGAAAG 59.492 57.895 0.00 0.00 0.00 2.62
2961 9513 2.930040 CTCGTGCGGAGTTGTATCAAAT 59.070 45.455 0.00 0.00 38.02 2.32
2991 9543 1.000506 GTCAGTCAGGTTACCTTGCGA 59.999 52.381 0.00 0.00 0.00 5.10
3013 9565 0.249741 GCAAGCAATCATGGATGGGC 60.250 55.000 0.00 0.00 0.00 5.36
3036 9588 4.299485 AGTATTTAGGAAGGGAGGGAGTG 58.701 47.826 0.00 0.00 0.00 3.51
3037 9589 4.558715 GAGTATTTAGGAAGGGAGGGAGT 58.441 47.826 0.00 0.00 0.00 3.85
3038 9590 3.904965 GGAGTATTTAGGAAGGGAGGGAG 59.095 52.174 0.00 0.00 0.00 4.30
3039 9591 3.376103 GGGAGTATTTAGGAAGGGAGGGA 60.376 52.174 0.00 0.00 0.00 4.20
3040 9592 2.980379 GGGAGTATTTAGGAAGGGAGGG 59.020 54.545 0.00 0.00 0.00 4.30
3041 9593 3.904965 GAGGGAGTATTTAGGAAGGGAGG 59.095 52.174 0.00 0.00 0.00 4.30
3042 9594 3.904965 GGAGGGAGTATTTAGGAAGGGAG 59.095 52.174 0.00 0.00 0.00 4.30
3043 9595 3.693359 CGGAGGGAGTATTTAGGAAGGGA 60.693 52.174 0.00 0.00 0.00 4.20
3044 9596 2.633481 CGGAGGGAGTATTTAGGAAGGG 59.367 54.545 0.00 0.00 0.00 3.95
3045 9597 3.306613 ACGGAGGGAGTATTTAGGAAGG 58.693 50.000 0.00 0.00 0.00 3.46
3046 9598 4.216708 AGACGGAGGGAGTATTTAGGAAG 58.783 47.826 0.00 0.00 0.00 3.46
3047 9599 4.079327 AGAGACGGAGGGAGTATTTAGGAA 60.079 45.833 0.00 0.00 0.00 3.36
3048 9600 3.462579 AGAGACGGAGGGAGTATTTAGGA 59.537 47.826 0.00 0.00 0.00 2.94
3049 9601 3.834938 AGAGACGGAGGGAGTATTTAGG 58.165 50.000 0.00 0.00 0.00 2.69
3050 9602 5.374921 TGTAGAGACGGAGGGAGTATTTAG 58.625 45.833 0.00 0.00 0.00 1.85
3051 9603 5.378230 TGTAGAGACGGAGGGAGTATTTA 57.622 43.478 0.00 0.00 0.00 1.40
3052 9604 4.246712 TGTAGAGACGGAGGGAGTATTT 57.753 45.455 0.00 0.00 0.00 1.40
3053 9605 3.947612 TGTAGAGACGGAGGGAGTATT 57.052 47.619 0.00 0.00 0.00 1.89
3054 9606 5.073417 ACTTATGTAGAGACGGAGGGAGTAT 59.927 44.000 0.00 0.00 0.00 2.12
3055 9607 4.411540 ACTTATGTAGAGACGGAGGGAGTA 59.588 45.833 0.00 0.00 0.00 2.59
3056 9608 3.202595 ACTTATGTAGAGACGGAGGGAGT 59.797 47.826 0.00 0.00 0.00 3.85
3057 9609 3.566322 CACTTATGTAGAGACGGAGGGAG 59.434 52.174 0.00 0.00 0.00 4.30
3058 9610 3.053842 ACACTTATGTAGAGACGGAGGGA 60.054 47.826 0.00 0.00 37.26 4.20
3059 9611 3.288964 ACACTTATGTAGAGACGGAGGG 58.711 50.000 0.00 0.00 37.26 4.30
3060 9612 4.200874 AGACACTTATGTAGAGACGGAGG 58.799 47.826 0.00 0.00 39.95 4.30
3061 9613 4.876679 TGAGACACTTATGTAGAGACGGAG 59.123 45.833 0.00 0.00 39.95 4.63
3062 9614 4.840271 TGAGACACTTATGTAGAGACGGA 58.160 43.478 0.00 0.00 39.95 4.69
3063 9615 5.124138 AGTTGAGACACTTATGTAGAGACGG 59.876 44.000 0.00 0.00 39.95 4.79
3064 9616 6.184580 AGTTGAGACACTTATGTAGAGACG 57.815 41.667 0.00 0.00 39.95 4.18
3065 9617 7.868415 ACAAAGTTGAGACACTTATGTAGAGAC 59.132 37.037 0.00 0.00 39.95 3.36
3066 9618 7.952671 ACAAAGTTGAGACACTTATGTAGAGA 58.047 34.615 0.00 0.00 39.95 3.10
3067 9619 9.862371 ATACAAAGTTGAGACACTTATGTAGAG 57.138 33.333 0.00 0.00 39.95 2.43
3076 9628 9.915629 CTAGAGTTAATACAAAGTTGAGACACT 57.084 33.333 0.00 0.00 0.00 3.55
3077 9629 9.694137 ACTAGAGTTAATACAAAGTTGAGACAC 57.306 33.333 0.00 0.00 0.00 3.67
3092 9644 8.858094 CGGAGGGAACTTTATACTAGAGTTAAT 58.142 37.037 0.00 0.00 44.43 1.40
3093 9645 7.201857 GCGGAGGGAACTTTATACTAGAGTTAA 60.202 40.741 0.00 0.00 44.43 2.01
3094 9646 6.264067 GCGGAGGGAACTTTATACTAGAGTTA 59.736 42.308 0.00 0.00 44.43 2.24
3095 9647 5.068855 GCGGAGGGAACTTTATACTAGAGTT 59.931 44.000 0.00 0.00 44.43 3.01
3096 9648 4.583907 GCGGAGGGAACTTTATACTAGAGT 59.416 45.833 0.00 0.00 44.43 3.24
3097 9649 4.022155 GGCGGAGGGAACTTTATACTAGAG 60.022 50.000 0.00 0.00 44.43 2.43
3098 9650 3.893813 GGCGGAGGGAACTTTATACTAGA 59.106 47.826 0.00 0.00 44.43 2.43
3099 9651 3.896272 AGGCGGAGGGAACTTTATACTAG 59.104 47.826 0.00 0.00 44.43 2.57
3100 9652 3.640029 CAGGCGGAGGGAACTTTATACTA 59.360 47.826 0.00 0.00 44.43 1.82
3101 9653 2.434702 CAGGCGGAGGGAACTTTATACT 59.565 50.000 0.00 0.00 44.43 2.12
3102 9654 2.433239 TCAGGCGGAGGGAACTTTATAC 59.567 50.000 0.00 0.00 44.43 1.47
3103 9655 2.754465 TCAGGCGGAGGGAACTTTATA 58.246 47.619 0.00 0.00 44.43 0.98
3104 9656 1.580059 TCAGGCGGAGGGAACTTTAT 58.420 50.000 0.00 0.00 44.43 1.40
3105 9657 1.354101 TTCAGGCGGAGGGAACTTTA 58.646 50.000 0.00 0.00 44.43 1.85
3106 9658 0.476771 TTTCAGGCGGAGGGAACTTT 59.523 50.000 0.00 0.00 44.43 2.66
3107 9659 0.476771 TTTTCAGGCGGAGGGAACTT 59.523 50.000 0.00 0.00 44.43 2.66
3109 9661 2.014857 GTATTTTCAGGCGGAGGGAAC 58.985 52.381 0.00 0.00 0.00 3.62
3110 9662 1.913419 AGTATTTTCAGGCGGAGGGAA 59.087 47.619 0.00 0.00 0.00 3.97
3111 9663 1.580059 AGTATTTTCAGGCGGAGGGA 58.420 50.000 0.00 0.00 0.00 4.20
3112 9664 2.017049 CAAGTATTTTCAGGCGGAGGG 58.983 52.381 0.00 0.00 0.00 4.30
3113 9665 2.678336 GACAAGTATTTTCAGGCGGAGG 59.322 50.000 0.00 0.00 0.00 4.30
3114 9666 2.678336 GGACAAGTATTTTCAGGCGGAG 59.322 50.000 0.00 0.00 0.00 4.63
3115 9667 2.304761 AGGACAAGTATTTTCAGGCGGA 59.695 45.455 0.00 0.00 0.00 5.54
3116 9668 2.711542 AGGACAAGTATTTTCAGGCGG 58.288 47.619 0.00 0.00 0.00 6.13
3117 9669 4.250464 TGTAGGACAAGTATTTTCAGGCG 58.750 43.478 0.00 0.00 0.00 5.52
3118 9670 6.569179 TTTGTAGGACAAGTATTTTCAGGC 57.431 37.500 0.00 0.00 39.53 4.85
3119 9671 7.176690 ACCATTTGTAGGACAAGTATTTTCAGG 59.823 37.037 0.00 0.00 39.53 3.86
3120 9672 8.110860 ACCATTTGTAGGACAAGTATTTTCAG 57.889 34.615 0.00 0.00 39.53 3.02
3121 9673 8.356657 CAACCATTTGTAGGACAAGTATTTTCA 58.643 33.333 0.00 0.00 39.53 2.69
3122 9674 8.357402 ACAACCATTTGTAGGACAAGTATTTTC 58.643 33.333 0.00 0.00 44.53 2.29
3123 9675 8.245195 ACAACCATTTGTAGGACAAGTATTTT 57.755 30.769 0.00 0.00 44.53 1.82
3124 9676 7.833285 ACAACCATTTGTAGGACAAGTATTT 57.167 32.000 0.00 0.00 44.53 1.40
3178 9730 9.300681 ACTTGTCCTAGAAATGATTGAAAATGA 57.699 29.630 0.00 0.00 0.00 2.57
3184 9736 9.396022 GGAAATACTTGTCCTAGAAATGATTGA 57.604 33.333 0.00 0.00 0.00 2.57
3185 9737 8.338259 CGGAAATACTTGTCCTAGAAATGATTG 58.662 37.037 0.00 0.00 0.00 2.67
3186 9738 7.499232 CCGGAAATACTTGTCCTAGAAATGATT 59.501 37.037 0.00 0.00 0.00 2.57
3187 9739 6.992715 CCGGAAATACTTGTCCTAGAAATGAT 59.007 38.462 0.00 0.00 0.00 2.45
3188 9740 6.155565 TCCGGAAATACTTGTCCTAGAAATGA 59.844 38.462 0.00 0.00 0.00 2.57
3189 9741 6.258068 GTCCGGAAATACTTGTCCTAGAAATG 59.742 42.308 5.23 0.00 0.00 2.32
3190 9742 6.346896 GTCCGGAAATACTTGTCCTAGAAAT 58.653 40.000 5.23 0.00 0.00 2.17
3191 9743 5.622914 CGTCCGGAAATACTTGTCCTAGAAA 60.623 44.000 5.23 0.00 0.00 2.52
3192 9744 4.142315 CGTCCGGAAATACTTGTCCTAGAA 60.142 45.833 5.23 0.00 0.00 2.10
3193 9745 3.379372 CGTCCGGAAATACTTGTCCTAGA 59.621 47.826 5.23 0.00 0.00 2.43
3194 9746 3.490419 CCGTCCGGAAATACTTGTCCTAG 60.490 52.174 5.23 0.00 37.50 3.02
3195 9747 2.428171 CCGTCCGGAAATACTTGTCCTA 59.572 50.000 5.23 0.00 37.50 2.94
3196 9748 1.206371 CCGTCCGGAAATACTTGTCCT 59.794 52.381 5.23 0.00 37.50 3.85
3197 9749 1.205417 TCCGTCCGGAAATACTTGTCC 59.795 52.381 5.23 0.00 42.05 4.02
3198 9750 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
3199 9751 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
3200 9752 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
3201 9753 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
3202 9754 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
3203 9755 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
3204 9756 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
3205 9757 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
3206 9758 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
3207 9759 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
3208 9760 0.982852 TAGTACTCCCTCCGTCCGGA 60.983 60.000 0.00 0.00 42.90 5.14
3209 9761 0.107017 TTAGTACTCCCTCCGTCCGG 60.107 60.000 0.00 0.00 0.00 5.14
3210 9762 1.307097 CTTAGTACTCCCTCCGTCCG 58.693 60.000 0.00 0.00 0.00 4.79
3211 9763 1.031235 GCTTAGTACTCCCTCCGTCC 58.969 60.000 0.00 0.00 0.00 4.79
3212 9764 2.055684 AGCTTAGTACTCCCTCCGTC 57.944 55.000 0.00 0.00 0.00 4.79
3213 9765 2.528673 AAGCTTAGTACTCCCTCCGT 57.471 50.000 0.00 0.00 0.00 4.69
3214 9766 4.036616 GTCTTAAGCTTAGTACTCCCTCCG 59.963 50.000 6.24 0.00 0.00 4.63
3215 9767 4.954826 TGTCTTAAGCTTAGTACTCCCTCC 59.045 45.833 16.64 0.00 0.00 4.30
3216 9768 5.653330 AGTGTCTTAAGCTTAGTACTCCCTC 59.347 44.000 16.64 0.00 0.00 4.30
3217 9769 5.581975 AGTGTCTTAAGCTTAGTACTCCCT 58.418 41.667 16.64 9.84 0.00 4.20
3218 9770 5.918426 AGTGTCTTAAGCTTAGTACTCCC 57.082 43.478 16.64 8.38 0.00 4.30
3219 9771 9.872721 AAATAAGTGTCTTAAGCTTAGTACTCC 57.127 33.333 16.64 10.07 0.00 3.85
3223 9775 9.444600 CCCAAAATAAGTGTCTTAAGCTTAGTA 57.555 33.333 6.24 0.00 0.00 1.82
3224 9776 8.161425 TCCCAAAATAAGTGTCTTAAGCTTAGT 58.839 33.333 6.24 0.00 0.00 2.24
3225 9777 8.451748 GTCCCAAAATAAGTGTCTTAAGCTTAG 58.548 37.037 6.24 1.77 0.00 2.18
3226 9778 7.118680 CGTCCCAAAATAAGTGTCTTAAGCTTA 59.881 37.037 0.86 0.86 0.00 3.09
3227 9779 6.072673 CGTCCCAAAATAAGTGTCTTAAGCTT 60.073 38.462 3.48 3.48 0.00 3.74
3228 9780 5.411669 CGTCCCAAAATAAGTGTCTTAAGCT 59.588 40.000 0.00 0.00 0.00 3.74
3229 9781 5.391629 CCGTCCCAAAATAAGTGTCTTAAGC 60.392 44.000 0.00 0.00 0.00 3.09
3230 9782 5.935789 TCCGTCCCAAAATAAGTGTCTTAAG 59.064 40.000 0.00 0.00 0.00 1.85
3231 9783 5.867330 TCCGTCCCAAAATAAGTGTCTTAA 58.133 37.500 0.00 0.00 0.00 1.85
3232 9784 5.484715 CTCCGTCCCAAAATAAGTGTCTTA 58.515 41.667 0.00 0.00 0.00 2.10
3233 9785 4.324267 CTCCGTCCCAAAATAAGTGTCTT 58.676 43.478 0.00 0.00 0.00 3.01
3234 9786 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
3235 9787 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
3236 9788 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
3237 9789 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
3238 9790 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
3239 9791 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
3240 9792 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
3241 9793 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
3242 9794 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
3243 9795 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
3244 9796 2.852714 TATACTCCCTCCGTCCCAAA 57.147 50.000 0.00 0.00 0.00 3.28
3245 9797 2.090943 ACATATACTCCCTCCGTCCCAA 60.091 50.000 0.00 0.00 0.00 4.12
3246 9798 1.502039 ACATATACTCCCTCCGTCCCA 59.498 52.381 0.00 0.00 0.00 4.37
3247 9799 2.169330 GACATATACTCCCTCCGTCCC 58.831 57.143 0.00 0.00 0.00 4.46
3248 9800 3.157750 AGACATATACTCCCTCCGTCC 57.842 52.381 0.00 0.00 0.00 4.79
3249 9801 5.532664 AAAAGACATATACTCCCTCCGTC 57.467 43.478 0.00 0.00 0.00 4.79
3250 9802 5.952347 AAAAAGACATATACTCCCTCCGT 57.048 39.130 0.00 0.00 0.00 4.69
3251 9803 7.230913 TCTCTAAAAAGACATATACTCCCTCCG 59.769 40.741 0.00 0.00 0.00 4.63
3252 9804 8.480133 TCTCTAAAAAGACATATACTCCCTCC 57.520 38.462 0.00 0.00 0.00 4.30
3255 9807 9.713713 GGAATCTCTAAAAAGACATATACTCCC 57.286 37.037 0.00 0.00 0.00 4.30
3287 9839 9.866655 TTATGCTGGAAAGGAATTTATCATAGT 57.133 29.630 0.00 0.00 0.00 2.12
3311 9863 9.352784 GCATTGTGTAGAACAGCAAATTATTTA 57.647 29.630 0.00 0.00 40.74 1.40
3439 9991 2.618241 GTTGTGACCAACTGAAGCATGA 59.382 45.455 0.00 0.00 46.07 3.07
3498 10050 9.532697 CAAAAGCTCAAACATAACAATTATTGC 57.467 29.630 4.68 0.00 0.00 3.56
3504 10056 9.463443 GTTAGTCAAAAGCTCAAACATAACAAT 57.537 29.630 0.00 0.00 0.00 2.71
3548 10100 8.648693 ACCAGTAATCTTGTCTTGTTACTACTT 58.351 33.333 0.00 0.00 36.06 2.24
3549 10101 8.191534 ACCAGTAATCTTGTCTTGTTACTACT 57.808 34.615 0.00 0.00 36.06 2.57
3771 11358 4.917415 GGAATTGGTGTGAGAATTTGTTCG 59.083 41.667 0.00 0.00 0.00 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.