Multiple sequence alignment - TraesCS1A01G185300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G185300 chr1A 100.000 6542 0 0 1 6542 335837094 335830553 0.000000e+00 12081.0
1 TraesCS1A01G185300 chr1A 96.212 132 3 2 571 700 430185793 430185662 1.430000e-51 215.0
2 TraesCS1A01G185300 chr1A 88.889 72 8 0 2801 2872 335834262 335834191 9.040000e-14 89.8
3 TraesCS1A01G185300 chr1A 88.889 72 8 0 2833 2904 335834294 335834223 9.040000e-14 89.8
4 TraesCS1A01G185300 chr1B 94.120 2993 147 22 3377 6351 346171519 346168538 0.000000e+00 4525.0
5 TraesCS1A01G185300 chr1B 94.273 2200 88 23 696 2872 346174024 346171840 0.000000e+00 3330.0
6 TraesCS1A01G185300 chr1B 88.258 528 41 11 23 548 346174522 346174014 4.340000e-171 612.0
7 TraesCS1A01G185300 chr1B 91.479 399 33 1 1080 1477 619096736 619097134 1.240000e-151 547.0
8 TraesCS1A01G185300 chr1B 90.083 363 29 4 2833 3192 346171911 346171553 1.280000e-126 464.0
9 TraesCS1A01G185300 chr1B 99.315 146 1 0 552 697 563557995 563557850 1.400000e-66 265.0
10 TraesCS1A01G185300 chr1B 95.706 163 7 0 1315 1477 541402235 541402397 5.030000e-66 263.0
11 TraesCS1A01G185300 chr1B 94.521 146 8 0 552 697 299981547 299981402 6.600000e-55 226.0
12 TraesCS1A01G185300 chr1B 92.593 54 2 1 1253 1304 541402189 541402242 7.030000e-10 76.8
13 TraesCS1A01G185300 chr1D 94.409 1556 79 4 4829 6381 267379349 267380899 0.000000e+00 2385.0
14 TraesCS1A01G185300 chr1D 95.324 1433 47 13 3368 4785 267377927 267379354 0.000000e+00 2257.0
15 TraesCS1A01G185300 chr1D 96.256 1202 27 9 696 1886 267375491 267376685 0.000000e+00 1954.0
16 TraesCS1A01G185300 chr1D 93.910 936 38 9 1951 2872 267376686 267377616 0.000000e+00 1395.0
17 TraesCS1A01G185300 chr1D 88.302 530 46 10 23 548 267374984 267375501 7.200000e-174 621.0
18 TraesCS1A01G185300 chr1D 91.713 362 24 3 2833 3192 267377545 267377902 1.270000e-136 497.0
19 TraesCS1A01G185300 chr1D 90.265 113 8 3 5817 5927 474916814 474916703 1.900000e-30 145.0
20 TraesCS1A01G185300 chr5A 85.739 575 64 14 1047 1610 662348008 662348575 5.650000e-165 592.0
21 TraesCS1A01G185300 chr5A 78.545 797 153 11 3417 4204 662349749 662350536 5.850000e-140 508.0
22 TraesCS1A01G185300 chr5A 96.528 144 4 1 3235 3378 235283393 235283535 3.050000e-58 237.0
23 TraesCS1A01G185300 chr5A 76.905 420 74 19 2309 2718 662348961 662349367 3.970000e-52 217.0
24 TraesCS1A01G185300 chr5A 87.356 174 12 7 5755 5927 37967869 37968033 2.410000e-44 191.0
25 TraesCS1A01G185300 chr4D 85.565 575 65 14 1047 1610 481141367 481140800 2.630000e-163 586.0
26 TraesCS1A01G185300 chr4D 78.277 801 148 19 3417 4204 481139571 481138784 5.890000e-135 492.0
27 TraesCS1A01G185300 chr4D 76.755 413 86 10 2309 2718 481140412 481140007 8.540000e-54 222.0
28 TraesCS1A01G185300 chr4D 97.143 105 3 0 5660 5764 348307126 348307230 1.870000e-40 178.0
29 TraesCS1A01G185300 chr4D 90.351 114 8 1 5817 5927 348307238 348307351 5.290000e-31 147.0
30 TraesCS1A01G185300 chr5B 92.231 399 30 1 1080 1477 493287066 493287464 1.230000e-156 564.0
31 TraesCS1A01G185300 chr5B 92.793 111 8 0 5817 5927 45021765 45021655 1.890000e-35 161.0
32 TraesCS1A01G185300 chr5B 97.368 38 1 0 1591 1628 364105266 364105229 1.520000e-06 65.8
33 TraesCS1A01G185300 chr5B 97.368 38 1 0 1591 1628 506503167 506503204 1.520000e-06 65.8
34 TraesCS1A01G185300 chr2D 89.975 399 28 2 1080 1477 69243472 69243085 7.570000e-139 505.0
35 TraesCS1A01G185300 chr2D 97.143 105 3 0 5660 5764 33946107 33946003 1.870000e-40 178.0
36 TraesCS1A01G185300 chr2D 96.190 105 4 0 5660 5764 56188904 56188800 8.720000e-39 172.0
37 TraesCS1A01G185300 chr2D 100.000 40 0 0 951 990 427554350 427554389 2.530000e-09 75.0
38 TraesCS1A01G185300 chr4B 86.758 438 48 7 1181 1610 609490663 609490228 4.590000e-131 479.0
39 TraesCS1A01G185300 chr4B 77.033 418 74 18 2309 2717 609489822 609489418 3.070000e-53 220.0
40 TraesCS1A01G185300 chr6A 100.000 150 0 0 548 697 330376524 330376673 1.800000e-70 278.0
41 TraesCS1A01G185300 chr6A 100.000 132 0 0 3235 3366 484161783 484161914 1.820000e-60 244.0
42 TraesCS1A01G185300 chr6A 97.222 144 3 1 3235 3378 392093155 392093013 6.550000e-60 243.0
43 TraesCS1A01G185300 chr6A 95.683 139 6 0 3235 3373 257264914 257265052 2.370000e-54 224.0
44 TraesCS1A01G185300 chr6A 90.090 111 11 0 5817 5927 41340332 41340222 1.900000e-30 145.0
45 TraesCS1A01G185300 chr7D 88.745 231 14 1 1164 1394 266895097 266894879 8.360000e-69 272.0
46 TraesCS1A01G185300 chr7D 97.222 144 2 2 3235 3377 299508043 299508185 6.550000e-60 243.0
47 TraesCS1A01G185300 chr7D 96.154 104 4 0 5661 5764 293591676 293591779 3.140000e-38 171.0
48 TraesCS1A01G185300 chr7D 97.368 38 1 0 1591 1628 587110782 587110819 1.520000e-06 65.8
49 TraesCS1A01G185300 chr7B 98.658 149 2 0 549 697 657528474 657528622 1.400000e-66 265.0
50 TraesCS1A01G185300 chr7A 98.658 149 2 0 549 697 664429167 664429315 1.400000e-66 265.0
51 TraesCS1A01G185300 chr7A 98.582 141 0 2 3235 3375 452303735 452303873 1.410000e-61 248.0
52 TraesCS1A01G185300 chr3A 99.275 138 0 1 3235 3372 703617046 703617182 1.410000e-61 248.0
53 TraesCS1A01G185300 chr2A 98.551 138 2 0 561 698 717254412 717254549 1.820000e-60 244.0
54 TraesCS1A01G185300 chr2A 95.302 149 7 0 549 697 696927351 696927499 3.050000e-58 237.0
55 TraesCS1A01G185300 chr2A 94.286 105 6 0 5817 5921 36029119 36029223 1.890000e-35 161.0
56 TraesCS1A01G185300 chr4A 95.973 149 6 0 549 697 541884851 541884999 6.550000e-60 243.0
57 TraesCS1A01G185300 chr2B 97.222 144 3 1 3235 3378 182243457 182243599 6.550000e-60 243.0
58 TraesCS1A01G185300 chr2B 96.000 150 3 3 3235 3381 168551033 168550884 2.360000e-59 241.0
59 TraesCS1A01G185300 chr5D 97.143 105 3 0 5660 5764 563593129 563593025 1.870000e-40 178.0
60 TraesCS1A01G185300 chr5D 96.190 105 4 0 5660 5764 213075030 213075134 8.720000e-39 172.0
61 TraesCS1A01G185300 chr6D 95.238 105 5 0 5660 5764 263961767 263961663 4.060000e-37 167.0
62 TraesCS1A01G185300 chr3B 91.429 105 9 0 5817 5921 262837402 262837506 1.900000e-30 145.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G185300 chr1A 335830553 335837094 6541 True 4086.866667 12081 92.592667 1 6542 3 chr1A.!!$R2 6541
1 TraesCS1A01G185300 chr1B 346168538 346174522 5984 True 2232.750000 4525 91.683500 23 6351 4 chr1B.!!$R3 6328
2 TraesCS1A01G185300 chr1D 267374984 267380899 5915 False 1518.166667 2385 93.319000 23 6381 6 chr1D.!!$F1 6358
3 TraesCS1A01G185300 chr5A 662348008 662350536 2528 False 439.000000 592 80.396333 1047 4204 3 chr5A.!!$F3 3157
4 TraesCS1A01G185300 chr4D 481138784 481141367 2583 True 433.333333 586 80.199000 1047 4204 3 chr4D.!!$R1 3157
5 TraesCS1A01G185300 chr4B 609489418 609490663 1245 True 349.500000 479 81.895500 1181 2717 2 chr4B.!!$R1 1536

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
645 649 0.036952 CCACACTCTGTTCGCTGGAT 60.037 55.000 0.00 0.00 0.00 3.41 F
691 695 0.105778 TGATGTCGTGTGTGGAGCAA 59.894 50.000 0.00 0.00 0.00 3.91 F
695 699 0.517316 GTCGTGTGTGGAGCAATTCC 59.483 55.000 0.00 0.00 46.98 3.01 F
831 835 1.225854 GTTGACGAGCAAGCGCATC 60.226 57.895 11.47 0.45 42.27 3.91 F
2648 2756 1.813513 AACAACTCTTGCTCGATGGG 58.186 50.000 0.00 0.00 0.00 4.00 F
3264 3378 0.104356 TAGTGGTGGGAAGGGGTTGA 60.104 55.000 0.00 0.00 0.00 3.18 F
3298 3412 0.331278 CCCAGGTTCAAGGCATGGTA 59.669 55.000 0.00 0.00 36.19 3.25 F
4177 4645 0.619832 AGAGGGATCCTGCTGCTCAA 60.620 55.000 12.58 0.00 31.76 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1655 1671 1.804748 ACTGTAAAAACCTAGCAGCGC 59.195 47.619 0.00 0.00 0.00 5.92 R
2295 2395 2.107953 GCCGCTTTGTTTTGCCCA 59.892 55.556 0.00 0.00 0.00 5.36 R
2627 2735 2.160417 CCCATCGAGCAAGAGTTGTTTC 59.840 50.000 0.00 0.00 0.00 2.78 R
2827 2938 2.101415 AGGTTTGCTGGAAAGAAACTGC 59.899 45.455 0.00 0.00 31.54 4.40 R
3748 4213 3.378742 TGCTACGTCTTCCTTCTGATCTC 59.621 47.826 0.00 0.00 0.00 2.75 R
4942 5426 0.249031 GGTTGACCAGTTTGCAGCAC 60.249 55.000 0.00 0.00 35.64 4.40 R
5116 5600 0.682855 TCATGGCGGTGGAAATTCCC 60.683 55.000 9.87 0.79 35.03 3.97 R
6092 6584 0.613260 TCCATCCTTTCACCACCTCG 59.387 55.000 0.00 0.00 0.00 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 3.873952 CCAAGAAGTACTAGCTCAATGCC 59.126 47.826 0.00 0.00 44.23 4.40
36 37 1.123077 ACTAGCTCAATGCCGGATCA 58.877 50.000 5.05 0.00 44.23 2.92
146 148 2.034532 TGTAGGTGCTCGGACCGA 59.965 61.111 17.28 17.28 41.35 4.69
148 150 2.034532 TAGGTGCTCGGACCGACA 59.965 61.111 13.88 13.37 41.35 4.35
164 166 0.676151 GACACGTCTCTACCCGTCCT 60.676 60.000 0.00 0.00 34.59 3.85
172 174 1.212934 TCTACCCGTCCTCCTGTCCT 61.213 60.000 0.00 0.00 0.00 3.85
233 235 0.834612 AGGAGGTGACCAACGTTGAA 59.165 50.000 29.35 11.69 0.00 2.69
283 286 3.624861 AGGCAAGATAACGCTGAATTCTG 59.375 43.478 7.05 7.51 0.00 3.02
291 294 1.203928 CGCTGAATTCTGCCTCGTAG 58.796 55.000 25.89 11.23 37.50 3.51
323 326 0.337428 AGCAATCCTGGAGCCCAAAT 59.663 50.000 1.52 0.00 30.80 2.32
343 346 5.947228 AATGAGCTTTCTGTGAAAATCGA 57.053 34.783 0.00 0.00 0.00 3.59
347 350 3.372206 AGCTTTCTGTGAAAATCGATCGG 59.628 43.478 16.41 0.00 0.00 4.18
352 355 3.132111 TCTGTGAAAATCGATCGGGATCA 59.868 43.478 16.41 11.83 37.69 2.92
353 356 3.867857 TGTGAAAATCGATCGGGATCAA 58.132 40.909 16.41 0.00 37.69 2.57
372 375 3.521937 TCAACCGGGATTAGAAAGGACAT 59.478 43.478 6.32 0.00 0.00 3.06
384 387 2.969821 AAGGACATGGTGCCAGTTTA 57.030 45.000 0.00 0.00 0.00 2.01
397 400 5.479027 GGTGCCAGTTTAAGGGATTTTAAGA 59.521 40.000 0.00 0.00 0.00 2.10
420 423 3.771577 AGGGTTTGATTCAGACTTCGT 57.228 42.857 7.22 0.00 0.00 3.85
444 447 6.577427 GTGTACGAATTCAAGGTTGATTTCAC 59.423 38.462 19.67 14.21 42.91 3.18
446 449 6.331369 ACGAATTCAAGGTTGATTTCACAT 57.669 33.333 19.67 8.13 42.91 3.21
548 552 1.803334 TCCATCGGCGGCATTATTAC 58.197 50.000 10.53 0.00 0.00 1.89
549 553 1.070914 TCCATCGGCGGCATTATTACA 59.929 47.619 10.53 0.00 0.00 2.41
550 554 1.876799 CCATCGGCGGCATTATTACAA 59.123 47.619 10.53 0.00 0.00 2.41
551 555 2.350388 CCATCGGCGGCATTATTACAAC 60.350 50.000 10.53 0.00 0.00 3.32
552 556 2.025589 TCGGCGGCATTATTACAACA 57.974 45.000 10.53 0.00 0.00 3.33
553 557 1.666700 TCGGCGGCATTATTACAACAC 59.333 47.619 10.53 0.00 0.00 3.32
554 558 1.668751 CGGCGGCATTATTACAACACT 59.331 47.619 10.53 0.00 0.00 3.55
555 559 2.538737 CGGCGGCATTATTACAACACTG 60.539 50.000 10.53 0.00 0.00 3.66
556 560 2.450160 GCGGCATTATTACAACACTGC 58.550 47.619 0.00 0.00 0.00 4.40
557 561 2.097466 GCGGCATTATTACAACACTGCT 59.903 45.455 0.00 0.00 0.00 4.24
558 562 3.311322 GCGGCATTATTACAACACTGCTA 59.689 43.478 0.00 0.00 0.00 3.49
559 563 4.552767 GCGGCATTATTACAACACTGCTAG 60.553 45.833 0.00 0.00 0.00 3.42
560 564 4.024893 CGGCATTATTACAACACTGCTAGG 60.025 45.833 0.00 0.00 0.00 3.02
561 565 4.261197 GGCATTATTACAACACTGCTAGGC 60.261 45.833 0.00 0.00 0.00 3.93
562 566 4.552767 GCATTATTACAACACTGCTAGGCG 60.553 45.833 0.00 0.00 0.00 5.52
563 567 2.024176 ATTACAACACTGCTAGGCGG 57.976 50.000 0.00 0.00 41.29 6.13
564 568 0.970640 TTACAACACTGCTAGGCGGA 59.029 50.000 5.30 0.00 38.46 5.54
565 569 0.245539 TACAACACTGCTAGGCGGAC 59.754 55.000 5.30 0.00 38.46 4.79
566 570 2.094659 CAACACTGCTAGGCGGACG 61.095 63.158 5.30 0.00 38.46 4.79
567 571 2.273179 AACACTGCTAGGCGGACGA 61.273 57.895 5.30 0.00 38.46 4.20
568 572 2.202623 CACTGCTAGGCGGACGAC 60.203 66.667 5.30 0.00 38.46 4.34
569 573 2.361357 ACTGCTAGGCGGACGACT 60.361 61.111 5.07 5.07 38.46 4.18
570 574 1.077930 ACTGCTAGGCGGACGACTA 60.078 57.895 7.13 7.13 38.46 2.59
571 575 0.679002 ACTGCTAGGCGGACGACTAA 60.679 55.000 8.79 0.00 38.46 2.24
572 576 0.669077 CTGCTAGGCGGACGACTAAT 59.331 55.000 8.79 0.00 34.97 1.73
573 577 1.067212 CTGCTAGGCGGACGACTAATT 59.933 52.381 8.79 0.00 34.97 1.40
574 578 1.479323 TGCTAGGCGGACGACTAATTT 59.521 47.619 8.79 0.00 34.97 1.82
575 579 2.689471 TGCTAGGCGGACGACTAATTTA 59.311 45.455 8.79 0.00 34.97 1.40
576 580 3.243301 TGCTAGGCGGACGACTAATTTAG 60.243 47.826 8.79 1.79 34.97 1.85
577 581 3.004106 GCTAGGCGGACGACTAATTTAGA 59.996 47.826 8.79 0.00 34.97 2.10
578 582 3.433513 AGGCGGACGACTAATTTAGAC 57.566 47.619 10.39 3.33 0.00 2.59
579 583 2.114825 GGCGGACGACTAATTTAGACG 58.885 52.381 21.13 21.13 46.46 4.18
580 584 2.223340 GGCGGACGACTAATTTAGACGA 60.223 50.000 26.80 0.00 44.50 4.20
581 585 2.780557 GCGGACGACTAATTTAGACGAC 59.219 50.000 26.80 21.74 44.50 4.34
585 589 4.979388 GACGACTAATTTAGACGACCAGT 58.021 43.478 26.80 10.43 44.50 4.00
586 590 4.730657 ACGACTAATTTAGACGACCAGTG 58.269 43.478 26.80 4.83 44.50 3.66
587 591 3.546670 CGACTAATTTAGACGACCAGTGC 59.453 47.826 19.03 0.00 44.50 4.40
588 592 4.491676 GACTAATTTAGACGACCAGTGCA 58.508 43.478 10.39 0.00 0.00 4.57
589 593 4.243270 ACTAATTTAGACGACCAGTGCAC 58.757 43.478 9.40 9.40 0.00 4.57
590 594 1.710013 ATTTAGACGACCAGTGCACG 58.290 50.000 12.01 6.45 0.00 5.34
591 595 0.669619 TTTAGACGACCAGTGCACGA 59.330 50.000 12.01 0.00 0.00 4.35
592 596 0.039798 TTAGACGACCAGTGCACGAC 60.040 55.000 12.01 0.00 0.00 4.34
593 597 2.178892 TAGACGACCAGTGCACGACG 62.179 60.000 12.01 16.92 0.00 5.12
594 598 3.531920 GACGACCAGTGCACGACGA 62.532 63.158 24.88 0.00 0.00 4.20
595 599 2.126463 CGACCAGTGCACGACGAT 60.126 61.111 12.01 0.00 0.00 3.73
596 600 2.436539 CGACCAGTGCACGACGATG 61.437 63.158 12.01 3.42 0.00 3.84
597 601 1.080772 GACCAGTGCACGACGATGA 60.081 57.895 12.01 0.00 0.00 2.92
598 602 0.666274 GACCAGTGCACGACGATGAA 60.666 55.000 12.01 0.00 0.00 2.57
599 603 0.037326 ACCAGTGCACGACGATGAAT 60.037 50.000 12.01 0.00 0.00 2.57
600 604 0.647410 CCAGTGCACGACGATGAATC 59.353 55.000 12.01 0.00 0.00 2.52
601 605 0.647410 CAGTGCACGACGATGAATCC 59.353 55.000 12.01 0.00 0.00 3.01
602 606 0.460284 AGTGCACGACGATGAATCCC 60.460 55.000 12.01 0.00 0.00 3.85
603 607 0.739462 GTGCACGACGATGAATCCCA 60.739 55.000 0.00 0.00 0.00 4.37
604 608 0.460109 TGCACGACGATGAATCCCAG 60.460 55.000 0.00 0.00 0.00 4.45
605 609 1.766143 GCACGACGATGAATCCCAGC 61.766 60.000 0.00 0.00 0.00 4.85
606 610 1.144057 ACGACGATGAATCCCAGCC 59.856 57.895 0.00 0.00 0.00 4.85
607 611 1.143838 CGACGATGAATCCCAGCCA 59.856 57.895 0.00 0.00 0.00 4.75
608 612 1.154205 CGACGATGAATCCCAGCCAC 61.154 60.000 0.00 0.00 0.00 5.01
609 613 0.815615 GACGATGAATCCCAGCCACC 60.816 60.000 0.00 0.00 0.00 4.61
610 614 1.889105 CGATGAATCCCAGCCACCG 60.889 63.158 0.00 0.00 0.00 4.94
611 615 1.526887 GATGAATCCCAGCCACCGA 59.473 57.895 0.00 0.00 0.00 4.69
612 616 0.107214 GATGAATCCCAGCCACCGAA 60.107 55.000 0.00 0.00 0.00 4.30
613 617 0.331278 ATGAATCCCAGCCACCGAAA 59.669 50.000 0.00 0.00 0.00 3.46
614 618 0.608035 TGAATCCCAGCCACCGAAAC 60.608 55.000 0.00 0.00 0.00 2.78
615 619 0.322546 GAATCCCAGCCACCGAAACT 60.323 55.000 0.00 0.00 0.00 2.66
616 620 0.322546 AATCCCAGCCACCGAAACTC 60.323 55.000 0.00 0.00 0.00 3.01
617 621 2.521958 ATCCCAGCCACCGAAACTCG 62.522 60.000 0.00 0.00 40.07 4.18
618 622 2.030562 CCAGCCACCGAAACTCGT 59.969 61.111 0.00 0.00 38.40 4.18
619 623 2.027625 CCAGCCACCGAAACTCGTC 61.028 63.158 0.00 0.00 38.40 4.20
620 624 2.027625 CAGCCACCGAAACTCGTCC 61.028 63.158 0.00 0.00 38.40 4.79
621 625 2.029964 GCCACCGAAACTCGTCCA 59.970 61.111 0.00 0.00 38.40 4.02
622 626 2.315386 GCCACCGAAACTCGTCCAC 61.315 63.158 0.00 0.00 38.40 4.02
623 627 1.068417 CCACCGAAACTCGTCCACA 59.932 57.895 0.00 0.00 38.40 4.17
624 628 0.944311 CCACCGAAACTCGTCCACAG 60.944 60.000 0.00 0.00 38.40 3.66
625 629 1.300697 ACCGAAACTCGTCCACAGC 60.301 57.895 0.00 0.00 38.40 4.40
626 630 2.027625 CCGAAACTCGTCCACAGCC 61.028 63.158 0.00 0.00 38.40 4.85
627 631 2.027625 CGAAACTCGTCCACAGCCC 61.028 63.158 0.00 0.00 34.72 5.19
628 632 1.070786 GAAACTCGTCCACAGCCCA 59.929 57.895 0.00 0.00 0.00 5.36
629 633 1.227853 AAACTCGTCCACAGCCCAC 60.228 57.895 0.00 0.00 0.00 4.61
630 634 1.978455 AAACTCGTCCACAGCCCACA 61.978 55.000 0.00 0.00 0.00 4.17
631 635 2.357517 CTCGTCCACAGCCCACAC 60.358 66.667 0.00 0.00 0.00 3.82
632 636 2.842462 TCGTCCACAGCCCACACT 60.842 61.111 0.00 0.00 0.00 3.55
633 637 2.357517 CGTCCACAGCCCACACTC 60.358 66.667 0.00 0.00 0.00 3.51
634 638 2.872388 CGTCCACAGCCCACACTCT 61.872 63.158 0.00 0.00 0.00 3.24
635 639 1.302033 GTCCACAGCCCACACTCTG 60.302 63.158 0.00 0.00 36.45 3.35
636 640 1.766059 TCCACAGCCCACACTCTGT 60.766 57.895 0.00 0.00 43.67 3.41
637 641 1.149174 CCACAGCCCACACTCTGTT 59.851 57.895 0.00 0.00 41.19 3.16
638 642 0.886490 CCACAGCCCACACTCTGTTC 60.886 60.000 0.00 0.00 41.19 3.18
639 643 1.069765 ACAGCCCACACTCTGTTCG 59.930 57.895 0.00 0.00 40.32 3.95
640 644 2.031163 AGCCCACACTCTGTTCGC 59.969 61.111 0.00 0.00 0.00 4.70
641 645 2.031163 GCCCACACTCTGTTCGCT 59.969 61.111 0.00 0.00 0.00 4.93
642 646 2.320587 GCCCACACTCTGTTCGCTG 61.321 63.158 0.00 0.00 0.00 5.18
643 647 1.669115 CCCACACTCTGTTCGCTGG 60.669 63.158 0.00 0.00 0.00 4.85
644 648 1.367471 CCACACTCTGTTCGCTGGA 59.633 57.895 0.00 0.00 0.00 3.86
645 649 0.036952 CCACACTCTGTTCGCTGGAT 60.037 55.000 0.00 0.00 0.00 3.41
646 650 1.609061 CCACACTCTGTTCGCTGGATT 60.609 52.381 0.00 0.00 0.00 3.01
647 651 2.146342 CACACTCTGTTCGCTGGATTT 58.854 47.619 0.00 0.00 0.00 2.17
648 652 3.325870 CACACTCTGTTCGCTGGATTTA 58.674 45.455 0.00 0.00 0.00 1.40
649 653 3.935203 CACACTCTGTTCGCTGGATTTAT 59.065 43.478 0.00 0.00 0.00 1.40
650 654 4.393062 CACACTCTGTTCGCTGGATTTATT 59.607 41.667 0.00 0.00 0.00 1.40
651 655 4.393062 ACACTCTGTTCGCTGGATTTATTG 59.607 41.667 0.00 0.00 0.00 1.90
652 656 4.393062 CACTCTGTTCGCTGGATTTATTGT 59.607 41.667 0.00 0.00 0.00 2.71
653 657 4.631813 ACTCTGTTCGCTGGATTTATTGTC 59.368 41.667 0.00 0.00 0.00 3.18
654 658 3.616821 TCTGTTCGCTGGATTTATTGTCG 59.383 43.478 0.00 0.00 0.00 4.35
655 659 3.331150 TGTTCGCTGGATTTATTGTCGT 58.669 40.909 0.00 0.00 0.00 4.34
656 660 3.749088 TGTTCGCTGGATTTATTGTCGTT 59.251 39.130 0.00 0.00 0.00 3.85
657 661 4.142988 TGTTCGCTGGATTTATTGTCGTTC 60.143 41.667 0.00 0.00 0.00 3.95
658 662 3.591023 TCGCTGGATTTATTGTCGTTCA 58.409 40.909 0.00 0.00 0.00 3.18
659 663 4.188462 TCGCTGGATTTATTGTCGTTCAT 58.812 39.130 0.00 0.00 0.00 2.57
660 664 4.033932 TCGCTGGATTTATTGTCGTTCATG 59.966 41.667 0.00 0.00 0.00 3.07
661 665 4.601019 GCTGGATTTATTGTCGTTCATGG 58.399 43.478 0.00 0.00 0.00 3.66
662 666 4.335315 GCTGGATTTATTGTCGTTCATGGA 59.665 41.667 0.00 0.00 0.00 3.41
663 667 5.009010 GCTGGATTTATTGTCGTTCATGGAT 59.991 40.000 0.00 0.00 0.00 3.41
664 668 6.618287 TGGATTTATTGTCGTTCATGGATC 57.382 37.500 0.00 0.00 0.00 3.36
665 669 5.236263 TGGATTTATTGTCGTTCATGGATCG 59.764 40.000 0.00 0.00 0.00 3.69
666 670 5.334105 GGATTTATTGTCGTTCATGGATCGG 60.334 44.000 0.00 0.00 0.00 4.18
667 671 1.299541 ATTGTCGTTCATGGATCGGC 58.700 50.000 0.00 0.00 31.23 5.54
668 672 0.742990 TTGTCGTTCATGGATCGGCC 60.743 55.000 0.00 0.00 29.74 6.13
676 680 4.883240 TGGATCGGCCACATGATG 57.117 55.556 2.24 0.00 43.33 3.07
677 681 1.914475 TGGATCGGCCACATGATGT 59.086 52.632 2.24 0.00 43.33 3.06
678 682 0.179048 TGGATCGGCCACATGATGTC 60.179 55.000 2.24 0.00 43.33 3.06
679 683 1.224069 GGATCGGCCACATGATGTCG 61.224 60.000 2.24 2.98 36.34 4.35
680 684 0.530650 GATCGGCCACATGATGTCGT 60.531 55.000 2.24 0.00 0.00 4.34
681 685 0.811219 ATCGGCCACATGATGTCGTG 60.811 55.000 2.24 0.80 38.76 4.35
682 686 1.741401 CGGCCACATGATGTCGTGT 60.741 57.895 2.24 2.10 46.18 4.49
688 692 2.084610 ACATGATGTCGTGTGTGGAG 57.915 50.000 7.05 0.00 43.82 3.86
689 693 0.723414 CATGATGTCGTGTGTGGAGC 59.277 55.000 0.00 0.00 0.00 4.70
690 694 0.321346 ATGATGTCGTGTGTGGAGCA 59.679 50.000 0.00 0.00 0.00 4.26
691 695 0.105778 TGATGTCGTGTGTGGAGCAA 59.894 50.000 0.00 0.00 0.00 3.91
692 696 1.270785 TGATGTCGTGTGTGGAGCAAT 60.271 47.619 0.00 0.00 0.00 3.56
693 697 1.806542 GATGTCGTGTGTGGAGCAATT 59.193 47.619 0.00 0.00 0.00 2.32
694 698 1.225855 TGTCGTGTGTGGAGCAATTC 58.774 50.000 0.00 0.00 0.00 2.17
695 699 0.517316 GTCGTGTGTGGAGCAATTCC 59.483 55.000 0.00 0.00 46.98 3.01
831 835 1.225854 GTTGACGAGCAAGCGCATC 60.226 57.895 11.47 0.45 42.27 3.91
909 913 2.403259 GGAGCACCAAAATCCAAAACG 58.597 47.619 0.00 0.00 35.97 3.60
1655 1671 4.371786 TGCGCTTATAAACCTCTGATCTG 58.628 43.478 9.73 0.00 0.00 2.90
1657 1673 3.426859 CGCTTATAAACCTCTGATCTGCG 59.573 47.826 0.00 0.00 0.00 5.18
1682 1698 8.231837 CGCTGCTAGGTTTTTACAGTTAAATTA 58.768 33.333 0.00 0.00 0.00 1.40
1781 1804 5.535030 GGGTGGTTTTGAAGACTTCATAGTT 59.465 40.000 18.38 0.00 39.84 2.24
1818 1843 7.090173 GCTAACTTCCAGCATTTGTTTCATAA 58.910 34.615 0.00 0.00 38.93 1.90
1819 1844 7.598493 GCTAACTTCCAGCATTTGTTTCATAAA 59.402 33.333 0.00 0.00 38.93 1.40
1820 1845 7.951530 AACTTCCAGCATTTGTTTCATAAAG 57.048 32.000 0.00 0.00 0.00 1.85
1821 1846 7.054491 ACTTCCAGCATTTGTTTCATAAAGT 57.946 32.000 0.00 0.00 0.00 2.66
1822 1847 8.177119 ACTTCCAGCATTTGTTTCATAAAGTA 57.823 30.769 0.00 0.00 0.00 2.24
1823 1848 8.806146 ACTTCCAGCATTTGTTTCATAAAGTAT 58.194 29.630 0.00 0.00 0.00 2.12
1948 1974 6.311200 GCTAAAGTTAAACCATTGCATTCCTG 59.689 38.462 0.00 0.00 0.00 3.86
2077 2111 6.851222 TCTTGTCTTGAGAGCTAAAAACTG 57.149 37.500 0.00 0.00 0.00 3.16
2110 2146 1.933181 CACAACAAGCTGTCTGACGAA 59.067 47.619 2.98 0.00 0.00 3.85
2275 2311 2.951642 ACCACACTGATTTCCAACTGTG 59.048 45.455 0.00 0.00 40.18 3.66
2295 2395 4.221703 TGTGAAACATTTTGTGAAGGGTGT 59.778 37.500 0.00 0.00 45.67 4.16
2335 2435 5.163509 GCCTTCCATTGTATTTCCTTCTTCC 60.164 44.000 0.00 0.00 0.00 3.46
2482 2582 7.442666 CCTGGTAAGATAGTTGCTTCCTATTTC 59.557 40.741 0.00 0.00 0.00 2.17
2489 2589 9.732130 AGATAGTTGCTTCCTATTTCCATATTC 57.268 33.333 0.00 0.00 0.00 1.75
2491 2591 7.814264 AGTTGCTTCCTATTTCCATATTCTG 57.186 36.000 0.00 0.00 0.00 3.02
2495 2595 8.225603 TGCTTCCTATTTCCATATTCTGTTTC 57.774 34.615 0.00 0.00 0.00 2.78
2519 2619 4.386312 CCCCTTATATTTGGCCTTGACAGA 60.386 45.833 3.32 0.00 0.00 3.41
2545 2645 9.220767 ACTTACTGGTTTTCTTCAATCATAGTC 57.779 33.333 0.00 0.00 0.00 2.59
2547 2647 7.913674 ACTGGTTTTCTTCAATCATAGTCTC 57.086 36.000 0.00 0.00 0.00 3.36
2627 2735 2.864946 GCTGATAGATGACTGTGCACTG 59.135 50.000 20.83 20.83 0.00 3.66
2648 2756 1.813513 AACAACTCTTGCTCGATGGG 58.186 50.000 0.00 0.00 0.00 4.00
2725 2836 6.595682 CATGGGTATGAAACTTAGATCTGGT 58.404 40.000 5.18 1.19 36.36 4.00
2827 2938 6.662414 TTTCAGTACGCCTTATTTGAGATG 57.338 37.500 0.00 0.00 0.00 2.90
2836 2947 5.392380 CGCCTTATTTGAGATGCAGTTTCTT 60.392 40.000 0.00 0.00 0.00 2.52
2837 2948 6.393171 GCCTTATTTGAGATGCAGTTTCTTT 58.607 36.000 0.00 0.00 0.00 2.52
2838 2949 6.529477 GCCTTATTTGAGATGCAGTTTCTTTC 59.471 38.462 0.00 0.00 0.00 2.62
2839 2950 7.031975 CCTTATTTGAGATGCAGTTTCTTTCC 58.968 38.462 0.00 0.00 0.00 3.13
2840 2951 7.309377 CCTTATTTGAGATGCAGTTTCTTTCCA 60.309 37.037 0.00 0.00 0.00 3.53
2841 2952 5.443185 TTTGAGATGCAGTTTCTTTCCAG 57.557 39.130 0.00 0.00 0.00 3.86
2842 2953 2.816087 TGAGATGCAGTTTCTTTCCAGC 59.184 45.455 0.00 0.00 0.00 4.85
2843 2954 2.816087 GAGATGCAGTTTCTTTCCAGCA 59.184 45.455 0.00 0.00 36.34 4.41
2844 2955 3.225104 AGATGCAGTTTCTTTCCAGCAA 58.775 40.909 0.00 0.00 35.45 3.91
2845 2956 3.638160 AGATGCAGTTTCTTTCCAGCAAA 59.362 39.130 0.00 0.00 35.45 3.68
2846 2957 3.163630 TGCAGTTTCTTTCCAGCAAAC 57.836 42.857 0.00 0.00 0.00 2.93
2847 2958 2.159114 TGCAGTTTCTTTCCAGCAAACC 60.159 45.455 0.00 0.00 31.50 3.27
2848 2959 2.101415 GCAGTTTCTTTCCAGCAAACCT 59.899 45.455 0.00 0.00 31.50 3.50
2849 2960 3.430790 GCAGTTTCTTTCCAGCAAACCTT 60.431 43.478 0.00 0.00 31.50 3.50
2850 2961 4.363138 CAGTTTCTTTCCAGCAAACCTTC 58.637 43.478 0.00 0.00 31.50 3.46
2851 2962 4.098501 CAGTTTCTTTCCAGCAAACCTTCT 59.901 41.667 0.00 0.00 31.50 2.85
2852 2963 4.711846 AGTTTCTTTCCAGCAAACCTTCTT 59.288 37.500 0.00 0.00 31.50 2.52
2853 2964 5.187772 AGTTTCTTTCCAGCAAACCTTCTTT 59.812 36.000 0.00 0.00 31.50 2.52
2854 2965 4.654091 TCTTTCCAGCAAACCTTCTTTG 57.346 40.909 0.00 0.00 0.00 2.77
2855 2966 4.277476 TCTTTCCAGCAAACCTTCTTTGA 58.723 39.130 0.00 0.00 0.00 2.69
2856 2967 4.339247 TCTTTCCAGCAAACCTTCTTTGAG 59.661 41.667 0.00 0.00 0.00 3.02
2857 2968 3.297134 TCCAGCAAACCTTCTTTGAGT 57.703 42.857 0.00 0.00 0.00 3.41
2858 2969 3.631250 TCCAGCAAACCTTCTTTGAGTT 58.369 40.909 0.00 0.00 0.00 3.01
2859 2970 4.023291 TCCAGCAAACCTTCTTTGAGTTT 58.977 39.130 0.00 0.00 34.13 2.66
2860 2971 4.097892 TCCAGCAAACCTTCTTTGAGTTTC 59.902 41.667 0.00 0.00 31.54 2.78
2861 2972 4.142182 CCAGCAAACCTTCTTTGAGTTTCA 60.142 41.667 0.00 0.00 31.54 2.69
2862 2973 5.039333 CAGCAAACCTTCTTTGAGTTTCAG 58.961 41.667 0.00 0.00 31.54 3.02
2863 2974 4.706962 AGCAAACCTTCTTTGAGTTTCAGT 59.293 37.500 0.00 0.00 31.54 3.41
2864 2975 5.185828 AGCAAACCTTCTTTGAGTTTCAGTT 59.814 36.000 0.00 0.00 31.54 3.16
2865 2976 5.869344 GCAAACCTTCTTTGAGTTTCAGTTT 59.131 36.000 0.00 0.00 31.54 2.66
2866 2977 6.035005 GCAAACCTTCTTTGAGTTTCAGTTTC 59.965 38.462 0.00 0.00 31.54 2.78
2867 2978 7.315890 CAAACCTTCTTTGAGTTTCAGTTTCT 58.684 34.615 0.00 0.00 31.54 2.52
2877 2988 7.931578 TGAGTTTCAGTTTCTTTCCAGTAAA 57.068 32.000 0.00 0.00 0.00 2.01
2908 3020 5.445069 TGAGTTTCAGTTTCTTTCCCATGA 58.555 37.500 0.00 0.00 0.00 3.07
2956 3069 6.452242 TGTCGTGACACTGTATTACATTTCT 58.548 36.000 3.68 0.00 36.21 2.52
2966 3079 8.656849 CACTGTATTACATTTCTAGTTCACCAC 58.343 37.037 0.00 0.00 0.00 4.16
2970 3083 9.216117 GTATTACATTTCTAGTTCACCACTTGT 57.784 33.333 0.00 0.00 36.88 3.16
2971 3084 7.490962 TTACATTTCTAGTTCACCACTTGTG 57.509 36.000 0.00 0.00 46.88 3.33
2977 3090 0.668535 GTTCACCACTTGTGGAAGGC 59.331 55.000 24.67 9.39 45.48 4.35
2996 3109 5.291905 AGGCGCTCCTTATTAACATAACT 57.708 39.130 7.64 0.00 40.66 2.24
3037 3151 5.939764 AGGAAGATAGTGCAAGTGATGTA 57.060 39.130 0.00 0.00 0.00 2.29
3038 3152 6.299805 AGGAAGATAGTGCAAGTGATGTAA 57.700 37.500 0.00 0.00 0.00 2.41
3039 3153 6.344500 AGGAAGATAGTGCAAGTGATGTAAG 58.656 40.000 0.00 0.00 0.00 2.34
3040 3154 6.070538 AGGAAGATAGTGCAAGTGATGTAAGT 60.071 38.462 0.00 0.00 0.00 2.24
3116 3230 2.237143 TGCCTACTGGTTCCAAGAGATG 59.763 50.000 0.00 0.00 35.27 2.90
3153 3267 3.749609 TCTTTAGTTCTTTTGCCCTACGC 59.250 43.478 0.00 0.00 38.31 4.42
3154 3268 3.412237 TTAGTTCTTTTGCCCTACGCT 57.588 42.857 0.00 0.00 38.78 5.07
3180 3294 9.601810 TTGGACTATGGTCACTATACTATGAAT 57.398 33.333 11.67 0.00 43.77 2.57
3192 3306 9.888878 CACTATACTATGAATTTTGGCAAGATG 57.111 33.333 3.79 0.00 0.00 2.90
3193 3307 9.851686 ACTATACTATGAATTTTGGCAAGATGA 57.148 29.630 3.79 0.00 0.00 2.92
3239 3353 2.753296 CGCAAGGAAAATGAAAAGGCA 58.247 42.857 0.00 0.00 0.00 4.75
3240 3354 3.328505 CGCAAGGAAAATGAAAAGGCAT 58.671 40.909 0.00 0.00 0.00 4.40
3241 3355 4.493547 CGCAAGGAAAATGAAAAGGCATA 58.506 39.130 0.00 0.00 0.00 3.14
3242 3356 4.563976 CGCAAGGAAAATGAAAAGGCATAG 59.436 41.667 0.00 0.00 0.00 2.23
3243 3357 4.330894 GCAAGGAAAATGAAAAGGCATAGC 59.669 41.667 0.00 0.00 0.00 2.97
3254 3368 1.451936 GGCATAGCCTAGTGGTGGG 59.548 63.158 0.00 0.00 46.69 4.61
3255 3369 1.054406 GGCATAGCCTAGTGGTGGGA 61.054 60.000 0.00 0.00 46.69 4.37
3256 3370 0.837272 GCATAGCCTAGTGGTGGGAA 59.163 55.000 0.00 0.00 35.27 3.97
3257 3371 1.202698 GCATAGCCTAGTGGTGGGAAG 60.203 57.143 0.00 0.00 35.27 3.46
3258 3372 1.417890 CATAGCCTAGTGGTGGGAAGG 59.582 57.143 0.00 0.00 35.27 3.46
3259 3373 0.326238 TAGCCTAGTGGTGGGAAGGG 60.326 60.000 0.00 0.00 35.27 3.95
3260 3374 2.680370 GCCTAGTGGTGGGAAGGGG 61.680 68.421 0.00 0.00 35.27 4.79
3261 3375 1.229853 CCTAGTGGTGGGAAGGGGT 60.230 63.158 0.00 0.00 0.00 4.95
3262 3376 0.845102 CCTAGTGGTGGGAAGGGGTT 60.845 60.000 0.00 0.00 0.00 4.11
3263 3377 0.328258 CTAGTGGTGGGAAGGGGTTG 59.672 60.000 0.00 0.00 0.00 3.77
3264 3378 0.104356 TAGTGGTGGGAAGGGGTTGA 60.104 55.000 0.00 0.00 0.00 3.18
3265 3379 0.776080 AGTGGTGGGAAGGGGTTGAT 60.776 55.000 0.00 0.00 0.00 2.57
3266 3380 0.611896 GTGGTGGGAAGGGGTTGATG 60.612 60.000 0.00 0.00 0.00 3.07
3267 3381 1.682344 GGTGGGAAGGGGTTGATGC 60.682 63.158 0.00 0.00 0.00 3.91
3268 3382 1.682344 GTGGGAAGGGGTTGATGCC 60.682 63.158 0.00 0.00 0.00 4.40
3269 3383 1.856873 TGGGAAGGGGTTGATGCCT 60.857 57.895 0.00 0.00 0.00 4.75
3270 3384 1.388133 GGGAAGGGGTTGATGCCTT 59.612 57.895 0.00 0.00 0.00 4.35
3271 3385 0.684479 GGGAAGGGGTTGATGCCTTC 60.684 60.000 0.00 0.00 38.23 3.46
3272 3386 2.887790 GAAGGGGTTGATGCCTTCC 58.112 57.895 0.00 0.00 34.40 3.46
3273 3387 0.684479 GAAGGGGTTGATGCCTTCCC 60.684 60.000 0.00 0.00 39.22 3.97
3274 3388 1.442886 AAGGGGTTGATGCCTTCCCA 61.443 55.000 0.00 0.00 41.51 4.37
3275 3389 1.682344 GGGGTTGATGCCTTCCCAC 60.682 63.158 0.00 0.00 41.51 4.61
3276 3390 1.682344 GGGTTGATGCCTTCCCACC 60.682 63.158 0.00 0.00 39.68 4.61
3277 3391 1.682344 GGTTGATGCCTTCCCACCC 60.682 63.158 0.00 0.00 0.00 4.61
3278 3392 1.076549 GTTGATGCCTTCCCACCCA 59.923 57.895 0.00 0.00 0.00 4.51
3279 3393 1.076549 TTGATGCCTTCCCACCCAC 59.923 57.895 0.00 0.00 0.00 4.61
3280 3394 2.043953 GATGCCTTCCCACCCACC 60.044 66.667 0.00 0.00 0.00 4.61
3281 3395 3.662117 GATGCCTTCCCACCCACCC 62.662 68.421 0.00 0.00 0.00 4.61
3283 3397 4.366684 GCCTTCCCACCCACCCAG 62.367 72.222 0.00 0.00 0.00 4.45
3284 3398 3.661648 CCTTCCCACCCACCCAGG 61.662 72.222 0.00 0.00 37.03 4.45
3285 3399 2.858974 CTTCCCACCCACCCAGGT 60.859 66.667 0.00 0.00 42.40 4.00
3286 3400 2.370403 TTCCCACCCACCCAGGTT 60.370 61.111 0.00 0.00 38.39 3.50
3287 3401 2.426305 CTTCCCACCCACCCAGGTTC 62.426 65.000 0.00 0.00 38.39 3.62
3288 3402 3.182263 CCCACCCACCCAGGTTCA 61.182 66.667 0.00 0.00 38.39 3.18
3289 3403 2.773527 CCCACCCACCCAGGTTCAA 61.774 63.158 0.00 0.00 38.39 2.69
3290 3404 1.228552 CCACCCACCCAGGTTCAAG 60.229 63.158 0.00 0.00 38.39 3.02
3291 3405 1.228552 CACCCACCCAGGTTCAAGG 60.229 63.158 0.00 0.00 38.39 3.61
3292 3406 2.283173 CCCACCCAGGTTCAAGGC 60.283 66.667 0.00 0.00 34.66 4.35
3293 3407 2.520458 CCACCCAGGTTCAAGGCA 59.480 61.111 0.00 0.00 0.00 4.75
3294 3408 1.077265 CCACCCAGGTTCAAGGCAT 59.923 57.895 0.00 0.00 0.00 4.40
3295 3409 1.252904 CCACCCAGGTTCAAGGCATG 61.253 60.000 0.00 0.00 0.00 4.06
3296 3410 1.077265 ACCCAGGTTCAAGGCATGG 59.923 57.895 0.00 0.00 37.52 3.66
3297 3411 1.077265 CCCAGGTTCAAGGCATGGT 59.923 57.895 0.00 0.00 36.19 3.55
3298 3412 0.331278 CCCAGGTTCAAGGCATGGTA 59.669 55.000 0.00 0.00 36.19 3.25
3299 3413 1.463674 CCAGGTTCAAGGCATGGTAC 58.536 55.000 0.00 0.00 33.58 3.34
3300 3414 1.004745 CCAGGTTCAAGGCATGGTACT 59.995 52.381 0.00 0.00 33.58 2.73
3301 3415 2.555227 CCAGGTTCAAGGCATGGTACTT 60.555 50.000 0.00 0.00 33.58 2.24
3302 3416 2.489329 CAGGTTCAAGGCATGGTACTTG 59.511 50.000 0.00 0.00 44.09 3.16
3303 3417 1.202348 GGTTCAAGGCATGGTACTTGC 59.798 52.381 11.43 11.43 42.82 4.01
3304 3418 1.885887 GTTCAAGGCATGGTACTTGCA 59.114 47.619 18.60 0.00 42.82 4.08
3305 3419 2.284754 TCAAGGCATGGTACTTGCAA 57.715 45.000 18.60 0.00 42.82 4.08
3306 3420 2.806434 TCAAGGCATGGTACTTGCAAT 58.194 42.857 18.60 7.66 42.82 3.56
3307 3421 3.164268 TCAAGGCATGGTACTTGCAATT 58.836 40.909 18.60 0.00 42.82 2.32
3308 3422 3.577848 TCAAGGCATGGTACTTGCAATTT 59.422 39.130 18.60 9.78 42.82 1.82
3309 3423 3.598019 AGGCATGGTACTTGCAATTTG 57.402 42.857 18.60 0.00 41.95 2.32
3310 3424 2.234414 AGGCATGGTACTTGCAATTTGG 59.766 45.455 18.60 0.00 41.95 3.28
3311 3425 2.620242 GCATGGTACTTGCAATTTGGG 58.380 47.619 14.01 0.00 39.90 4.12
3312 3426 2.028203 GCATGGTACTTGCAATTTGGGT 60.028 45.455 14.01 0.00 39.90 4.51
3313 3427 3.556843 GCATGGTACTTGCAATTTGGGTT 60.557 43.478 14.01 0.00 39.90 4.11
3314 3428 4.640364 CATGGTACTTGCAATTTGGGTTT 58.360 39.130 0.00 0.00 0.00 3.27
3315 3429 4.065321 TGGTACTTGCAATTTGGGTTTG 57.935 40.909 0.00 0.00 0.00 2.93
3316 3430 3.452627 TGGTACTTGCAATTTGGGTTTGT 59.547 39.130 0.00 0.00 0.00 2.83
3317 3431 4.080863 TGGTACTTGCAATTTGGGTTTGTT 60.081 37.500 0.00 0.00 0.00 2.83
3318 3432 4.272261 GGTACTTGCAATTTGGGTTTGTTG 59.728 41.667 0.00 0.00 0.00 3.33
3319 3433 2.682352 ACTTGCAATTTGGGTTTGTTGC 59.318 40.909 0.00 2.25 45.27 4.17
3321 3435 2.753989 GCAATTTGGGTTTGTTGCAC 57.246 45.000 4.26 0.00 44.63 4.57
3322 3436 1.333308 GCAATTTGGGTTTGTTGCACC 59.667 47.619 4.26 0.00 44.63 5.01
3323 3437 2.636830 CAATTTGGGTTTGTTGCACCA 58.363 42.857 0.00 0.00 35.80 4.17
3324 3438 3.012518 CAATTTGGGTTTGTTGCACCAA 58.987 40.909 0.00 0.00 40.94 3.67
3325 3439 3.574354 ATTTGGGTTTGTTGCACCAAT 57.426 38.095 0.00 0.00 42.09 3.16
3326 3440 3.356529 TTTGGGTTTGTTGCACCAATT 57.643 38.095 0.00 0.00 42.09 2.32
3327 3441 4.487714 TTTGGGTTTGTTGCACCAATTA 57.512 36.364 0.00 0.00 42.09 1.40
3328 3442 4.696479 TTGGGTTTGTTGCACCAATTAT 57.304 36.364 0.00 0.00 38.02 1.28
3329 3443 5.808366 TTGGGTTTGTTGCACCAATTATA 57.192 34.783 0.00 0.00 38.02 0.98
3330 3444 5.140747 TGGGTTTGTTGCACCAATTATAC 57.859 39.130 0.00 0.00 35.80 1.47
3331 3445 4.835615 TGGGTTTGTTGCACCAATTATACT 59.164 37.500 0.00 0.00 35.80 2.12
3332 3446 5.167845 GGGTTTGTTGCACCAATTATACTG 58.832 41.667 0.00 0.00 35.80 2.74
3333 3447 5.279256 GGGTTTGTTGCACCAATTATACTGT 60.279 40.000 0.00 0.00 35.80 3.55
3334 3448 6.071840 GGGTTTGTTGCACCAATTATACTGTA 60.072 38.462 0.00 0.00 35.80 2.74
3335 3449 7.027161 GGTTTGTTGCACCAATTATACTGTAG 58.973 38.462 0.00 0.00 34.04 2.74
3336 3450 6.751514 TTGTTGCACCAATTATACTGTAGG 57.248 37.500 0.00 0.00 0.00 3.18
3337 3451 5.189928 TGTTGCACCAATTATACTGTAGGG 58.810 41.667 0.00 0.00 0.00 3.53
3338 3452 4.431416 TGCACCAATTATACTGTAGGGG 57.569 45.455 0.00 0.00 0.00 4.79
3339 3453 3.137544 TGCACCAATTATACTGTAGGGGG 59.862 47.826 0.00 0.00 0.00 5.40
3340 3454 3.137728 GCACCAATTATACTGTAGGGGGT 59.862 47.826 0.00 0.00 0.00 4.95
3341 3455 4.385977 GCACCAATTATACTGTAGGGGGTT 60.386 45.833 0.00 0.00 0.00 4.11
3342 3456 5.374071 CACCAATTATACTGTAGGGGGTTC 58.626 45.833 0.00 0.00 0.00 3.62
3343 3457 4.414514 ACCAATTATACTGTAGGGGGTTCC 59.585 45.833 0.00 0.00 0.00 3.62
3356 3470 3.069079 GGGGTTCCCTTACAGTCTTTC 57.931 52.381 7.87 0.00 41.34 2.62
3357 3471 2.643304 GGGGTTCCCTTACAGTCTTTCT 59.357 50.000 7.87 0.00 41.34 2.52
3358 3472 3.559384 GGGGTTCCCTTACAGTCTTTCTG 60.559 52.174 7.87 0.00 44.11 3.02
3360 3474 7.771544 GGGGTTCCCTTACAGTCTTTCTGTC 62.772 52.000 7.87 0.00 46.24 3.51
3712 4174 1.747709 CCATCTCCAAGCCTGAAGTG 58.252 55.000 0.00 0.00 0.00 3.16
3850 4315 3.141398 TGAATTGTCAACTGTGGAGAGC 58.859 45.455 0.00 0.00 0.00 4.09
3910 4375 3.607370 GAGTGGCCGGGACCAAGTC 62.607 68.421 2.18 8.06 42.70 3.01
4177 4645 0.619832 AGAGGGATCCTGCTGCTCAA 60.620 55.000 12.58 0.00 31.76 3.02
4228 4698 1.202817 GTCGGGTTTCCTCTGTCTCTC 59.797 57.143 0.00 0.00 0.00 3.20
4229 4699 1.075698 TCGGGTTTCCTCTGTCTCTCT 59.924 52.381 0.00 0.00 0.00 3.10
4530 5002 4.219264 TGCAATGACATCTATGGTCACA 57.781 40.909 0.00 0.00 46.99 3.58
4531 5003 3.940852 TGCAATGACATCTATGGTCACAC 59.059 43.478 0.00 0.00 46.99 3.82
4600 5073 5.385509 AAATTACCAACTTGATTCCACGG 57.614 39.130 0.00 0.00 0.00 4.94
4612 5085 5.554822 TGATTCCACGGTATGCTTAAAAC 57.445 39.130 0.00 0.00 0.00 2.43
4629 5106 9.991906 TGCTTAAAACAAGTACTAGTGTATCTT 57.008 29.630 5.39 2.48 0.00 2.40
4649 5126 5.766222 TCTTGTACTACTCTTCCGTTTGAC 58.234 41.667 0.00 0.00 0.00 3.18
4656 5133 4.632538 ACTCTTCCGTTTGACCTTTTTG 57.367 40.909 0.00 0.00 0.00 2.44
4720 5204 1.590932 CTCGATTCCATTGCAGGAGG 58.409 55.000 0.00 0.00 39.25 4.30
4723 5207 2.094675 CGATTCCATTGCAGGAGGTTT 58.905 47.619 0.00 0.00 39.25 3.27
4724 5208 3.054728 TCGATTCCATTGCAGGAGGTTTA 60.055 43.478 0.00 0.00 39.25 2.01
4839 5323 9.953825 GATTGCCGATTTACTATATTTAACTCG 57.046 33.333 8.44 8.44 33.64 4.18
4900 5384 3.505680 TCGTATTTGCCAGTCATGCTTTT 59.494 39.130 0.00 0.00 0.00 2.27
4942 5426 2.355209 GCTGGAAGGGTCTTTACTGGAG 60.355 54.545 0.00 0.00 0.00 3.86
4988 5472 4.758773 AATCCTTTGGTATGCCCATTTG 57.241 40.909 0.00 0.00 44.74 2.32
5019 5503 5.868801 ACCATTTTATGCACATAACAGCAAC 59.131 36.000 2.59 0.00 44.88 4.17
5050 5534 4.345257 AGTTATAAGATGCACATCCGTCCT 59.655 41.667 7.01 0.00 38.58 3.85
5055 5539 2.202756 GCACATCCGTCCTCGTCC 60.203 66.667 0.00 0.00 35.01 4.79
5056 5540 2.494918 CACATCCGTCCTCGTCCC 59.505 66.667 0.00 0.00 35.01 4.46
5062 5546 2.511600 CGTCCTCGTCCCAATGGC 60.512 66.667 0.00 0.00 0.00 4.40
5085 5569 7.781548 GCAATAGCCAATCTTCATTTTCATT 57.218 32.000 0.00 0.00 33.58 2.57
5086 5570 7.627340 GCAATAGCCAATCTTCATTTTCATTG 58.373 34.615 0.00 0.00 33.58 2.82
5099 5583 4.478206 TTTTCATTGCAAAACAGGACCA 57.522 36.364 1.71 0.00 0.00 4.02
5143 5629 0.249120 CCACCGCCATGACTAACTCA 59.751 55.000 0.00 0.00 0.00 3.41
5184 5672 7.835822 TGGTAATATTTTGTTTCCTGATGGTG 58.164 34.615 0.00 0.00 34.23 4.17
5188 5676 5.628797 ATTTTGTTTCCTGATGGTGGTTT 57.371 34.783 0.00 0.00 34.23 3.27
5196 5684 5.720371 TCCTGATGGTGGTTTAAATTGTG 57.280 39.130 0.00 0.00 34.23 3.33
5197 5685 4.021544 TCCTGATGGTGGTTTAAATTGTGC 60.022 41.667 0.00 0.00 34.23 4.57
5199 5687 3.319405 TGATGGTGGTTTAAATTGTGCGT 59.681 39.130 0.00 0.00 0.00 5.24
5206 5694 2.911819 TTAAATTGTGCGTAGGCTGC 57.088 45.000 9.11 0.00 40.82 5.25
5310 5798 3.914426 TCCATCTGCTTTAGGAGAACC 57.086 47.619 5.04 0.00 45.49 3.62
5370 5859 2.243736 TGGGGGTTCACTCAGTTTTCTT 59.756 45.455 0.00 0.00 0.00 2.52
5372 5861 4.079672 TGGGGGTTCACTCAGTTTTCTTTA 60.080 41.667 0.00 0.00 0.00 1.85
5390 5879 7.589958 TTCTTTATTTTCCTGCCAAGTGTTA 57.410 32.000 0.00 0.00 0.00 2.41
5445 5934 2.053627 CAAAGCCACTGCGAATTGTTC 58.946 47.619 0.00 0.00 44.33 3.18
5459 5948 5.334879 GCGAATTGTTCCATAGTTTCACTGT 60.335 40.000 0.00 0.00 0.00 3.55
5985 6477 2.262915 CTTCTCCTTGCGGCTCGT 59.737 61.111 0.00 0.00 0.00 4.18
5995 6487 0.531974 TGCGGCTCGTCTTCTTGTTT 60.532 50.000 0.00 0.00 0.00 2.83
5997 6489 0.790814 CGGCTCGTCTTCTTGTTTCC 59.209 55.000 0.00 0.00 0.00 3.13
6117 6609 2.061848 TGGTGAAAGGATGGAAGTGGA 58.938 47.619 0.00 0.00 0.00 4.02
6134 6626 1.055040 GGAGGATAGGCTGTGCATCT 58.945 55.000 5.44 0.00 0.00 2.90
6219 6720 1.740285 CCGGTGGATTCGTAGGAGG 59.260 63.158 0.00 0.00 0.00 4.30
6222 6723 1.067582 GTGGATTCGTAGGAGGCGG 59.932 63.158 0.00 0.00 0.00 6.13
6345 6846 2.517402 GTGTGTCGGCCCCACAAA 60.517 61.111 21.03 6.38 43.87 2.83
6352 6853 0.988832 TCGGCCCCACAAAAGATAGT 59.011 50.000 0.00 0.00 0.00 2.12
6354 6855 1.339631 CGGCCCCACAAAAGATAGTCA 60.340 52.381 0.00 0.00 0.00 3.41
6382 6883 4.832608 GCCCGGCCGTCTGGTTAG 62.833 72.222 26.12 5.50 37.01 2.34
6383 6884 3.072468 CCCGGCCGTCTGGTTAGA 61.072 66.667 26.12 0.00 37.01 2.10
6384 6885 2.652095 CCCGGCCGTCTGGTTAGAA 61.652 63.158 26.12 0.00 37.01 2.10
6385 6886 1.294138 CCGGCCGTCTGGTTAGAAA 59.706 57.895 26.12 0.00 37.67 2.52
6386 6887 1.017701 CCGGCCGTCTGGTTAGAAAC 61.018 60.000 26.12 0.00 37.67 2.78
6387 6888 0.037605 CGGCCGTCTGGTTAGAAACT 60.038 55.000 19.50 0.00 37.67 2.66
6388 6889 1.607251 CGGCCGTCTGGTTAGAAACTT 60.607 52.381 19.50 0.00 37.67 2.66
6389 6890 2.074576 GGCCGTCTGGTTAGAAACTTC 58.925 52.381 0.00 0.00 37.67 3.01
6390 6891 1.725164 GCCGTCTGGTTAGAAACTTCG 59.275 52.381 0.00 0.00 37.67 3.79
6391 6892 2.334838 CCGTCTGGTTAGAAACTTCGG 58.665 52.381 0.00 0.00 34.01 4.30
6392 6893 1.725164 CGTCTGGTTAGAAACTTCGGC 59.275 52.381 0.00 0.00 34.01 5.54
6393 6894 2.074576 GTCTGGTTAGAAACTTCGGCC 58.925 52.381 0.00 0.00 34.01 6.13
6394 6895 1.076332 CTGGTTAGAAACTTCGGCCG 58.924 55.000 22.12 22.12 0.00 6.13
6395 6896 0.320946 TGGTTAGAAACTTCGGCCGG 60.321 55.000 27.83 13.23 0.00 6.13
6396 6897 0.321034 GGTTAGAAACTTCGGCCGGT 60.321 55.000 27.83 14.02 0.00 5.28
6397 6898 1.073964 GTTAGAAACTTCGGCCGGTC 58.926 55.000 27.83 14.70 0.00 4.79
6398 6899 0.388907 TTAGAAACTTCGGCCGGTCG 60.389 55.000 25.52 25.52 0.00 4.79
6399 6900 2.824071 TAGAAACTTCGGCCGGTCGC 62.824 60.000 26.77 8.75 0.00 5.19
6400 6901 4.612412 AAACTTCGGCCGGTCGCA 62.612 61.111 26.77 13.58 40.31 5.10
6416 6917 2.951745 CACGCGAGCCTGACGATC 60.952 66.667 15.93 0.00 0.00 3.69
6417 6918 3.440415 ACGCGAGCCTGACGATCA 61.440 61.111 15.93 0.00 0.00 2.92
6418 6919 2.202610 CGCGAGCCTGACGATCAA 60.203 61.111 0.00 0.00 0.00 2.57
6419 6920 2.226896 CGCGAGCCTGACGATCAAG 61.227 63.158 0.00 0.00 0.00 3.02
6420 6921 2.520904 GCGAGCCTGACGATCAAGC 61.521 63.158 0.00 0.00 34.16 4.01
6421 6922 1.880340 CGAGCCTGACGATCAAGCC 60.880 63.158 0.00 0.00 34.47 4.35
6422 6923 1.519719 GAGCCTGACGATCAAGCCT 59.480 57.895 0.00 0.00 34.47 4.58
6423 6924 0.809241 GAGCCTGACGATCAAGCCTG 60.809 60.000 0.00 0.00 34.47 4.85
6424 6925 1.078848 GCCTGACGATCAAGCCTGT 60.079 57.895 0.00 0.00 27.82 4.00
6425 6926 1.086634 GCCTGACGATCAAGCCTGTC 61.087 60.000 0.00 0.00 27.82 3.51
6426 6927 0.803768 CCTGACGATCAAGCCTGTCG 60.804 60.000 0.00 5.97 40.91 4.35
6429 6930 3.715854 ACGATCAAGCCTGTCGTAC 57.284 52.632 10.02 0.00 45.64 3.67
6430 6931 0.885879 ACGATCAAGCCTGTCGTACA 59.114 50.000 10.02 0.00 45.64 2.90
6431 6932 1.476891 ACGATCAAGCCTGTCGTACAT 59.523 47.619 10.02 0.00 45.64 2.29
6432 6933 2.120232 CGATCAAGCCTGTCGTACATC 58.880 52.381 0.00 0.00 0.00 3.06
6433 6934 2.223595 CGATCAAGCCTGTCGTACATCT 60.224 50.000 0.00 0.00 0.00 2.90
6434 6935 3.003378 CGATCAAGCCTGTCGTACATCTA 59.997 47.826 0.00 0.00 0.00 1.98
6435 6936 4.541779 GATCAAGCCTGTCGTACATCTAG 58.458 47.826 0.00 0.00 0.00 2.43
6436 6937 3.353557 TCAAGCCTGTCGTACATCTAGT 58.646 45.455 0.00 0.00 0.00 2.57
6437 6938 3.762288 TCAAGCCTGTCGTACATCTAGTT 59.238 43.478 0.00 0.00 0.00 2.24
6438 6939 4.945543 TCAAGCCTGTCGTACATCTAGTTA 59.054 41.667 0.00 0.00 0.00 2.24
6439 6940 5.416639 TCAAGCCTGTCGTACATCTAGTTAA 59.583 40.000 0.00 0.00 0.00 2.01
6440 6941 5.909621 AGCCTGTCGTACATCTAGTTAAA 57.090 39.130 0.00 0.00 0.00 1.52
6441 6942 6.276832 AGCCTGTCGTACATCTAGTTAAAA 57.723 37.500 0.00 0.00 0.00 1.52
6442 6943 6.694447 AGCCTGTCGTACATCTAGTTAAAAA 58.306 36.000 0.00 0.00 0.00 1.94
6460 6961 3.746045 AAAAAGAGAGGCTGTCGTACA 57.254 42.857 5.96 0.00 0.00 2.90
6461 6962 3.963428 AAAAGAGAGGCTGTCGTACAT 57.037 42.857 5.96 0.00 0.00 2.29
6462 6963 3.512033 AAAGAGAGGCTGTCGTACATC 57.488 47.619 5.96 0.00 0.00 3.06
6463 6964 2.428544 AGAGAGGCTGTCGTACATCT 57.571 50.000 5.96 0.00 0.00 2.90
6464 6965 2.294074 AGAGAGGCTGTCGTACATCTC 58.706 52.381 5.96 0.00 33.93 2.75
6465 6966 2.017782 GAGAGGCTGTCGTACATCTCA 58.982 52.381 0.00 0.00 33.93 3.27
6466 6967 1.746220 AGAGGCTGTCGTACATCTCAC 59.254 52.381 0.00 0.00 33.59 3.51
6467 6968 0.818296 AGGCTGTCGTACATCTCACC 59.182 55.000 0.00 0.00 0.00 4.02
6468 6969 0.179108 GGCTGTCGTACATCTCACCC 60.179 60.000 0.00 0.00 0.00 4.61
6469 6970 0.179108 GCTGTCGTACATCTCACCCC 60.179 60.000 0.00 0.00 0.00 4.95
6470 6971 1.475403 CTGTCGTACATCTCACCCCT 58.525 55.000 0.00 0.00 0.00 4.79
6471 6972 1.135139 CTGTCGTACATCTCACCCCTG 59.865 57.143 0.00 0.00 0.00 4.45
6472 6973 0.179108 GTCGTACATCTCACCCCTGC 60.179 60.000 0.00 0.00 0.00 4.85
6473 6974 0.613572 TCGTACATCTCACCCCTGCA 60.614 55.000 0.00 0.00 0.00 4.41
6474 6975 0.460284 CGTACATCTCACCCCTGCAC 60.460 60.000 0.00 0.00 0.00 4.57
6475 6976 0.107654 GTACATCTCACCCCTGCACC 60.108 60.000 0.00 0.00 0.00 5.01
6476 6977 0.546507 TACATCTCACCCCTGCACCA 60.547 55.000 0.00 0.00 0.00 4.17
6477 6978 1.210204 ACATCTCACCCCTGCACCAT 61.210 55.000 0.00 0.00 0.00 3.55
6478 6979 0.465097 CATCTCACCCCTGCACCATC 60.465 60.000 0.00 0.00 0.00 3.51
6479 6980 0.622738 ATCTCACCCCTGCACCATCT 60.623 55.000 0.00 0.00 0.00 2.90
6480 6981 1.077930 CTCACCCCTGCACCATCTG 60.078 63.158 0.00 0.00 0.00 2.90
6481 6982 1.845627 CTCACCCCTGCACCATCTGT 61.846 60.000 0.00 0.00 0.00 3.41
6482 6983 1.377725 CACCCCTGCACCATCTGTC 60.378 63.158 0.00 0.00 0.00 3.51
6483 6984 2.273449 CCCCTGCACCATCTGTCC 59.727 66.667 0.00 0.00 0.00 4.02
6484 6985 2.605607 CCCCTGCACCATCTGTCCA 61.606 63.158 0.00 0.00 0.00 4.02
6485 6986 1.611419 CCCTGCACCATCTGTCCAT 59.389 57.895 0.00 0.00 0.00 3.41
6486 6987 0.465097 CCCTGCACCATCTGTCCATC 60.465 60.000 0.00 0.00 0.00 3.51
6487 6988 0.545171 CCTGCACCATCTGTCCATCT 59.455 55.000 0.00 0.00 0.00 2.90
6488 6989 1.064906 CCTGCACCATCTGTCCATCTT 60.065 52.381 0.00 0.00 0.00 2.40
6489 6990 2.171237 CCTGCACCATCTGTCCATCTTA 59.829 50.000 0.00 0.00 0.00 2.10
6490 6991 3.181447 CCTGCACCATCTGTCCATCTTAT 60.181 47.826 0.00 0.00 0.00 1.73
6491 6992 4.040829 CCTGCACCATCTGTCCATCTTATA 59.959 45.833 0.00 0.00 0.00 0.98
6492 6993 4.960938 TGCACCATCTGTCCATCTTATAC 58.039 43.478 0.00 0.00 0.00 1.47
6493 6994 4.655649 TGCACCATCTGTCCATCTTATACT 59.344 41.667 0.00 0.00 0.00 2.12
6494 6995 5.130975 TGCACCATCTGTCCATCTTATACTT 59.869 40.000 0.00 0.00 0.00 2.24
6495 6996 6.326323 TGCACCATCTGTCCATCTTATACTTA 59.674 38.462 0.00 0.00 0.00 2.24
6496 6997 7.016563 TGCACCATCTGTCCATCTTATACTTAT 59.983 37.037 0.00 0.00 0.00 1.73
6497 6998 7.880195 GCACCATCTGTCCATCTTATACTTATT 59.120 37.037 0.00 0.00 0.00 1.40
6498 6999 9.784531 CACCATCTGTCCATCTTATACTTATTT 57.215 33.333 0.00 0.00 0.00 1.40
6518 7019 3.926821 TTTTTCGGGCGCTTATCTTTT 57.073 38.095 7.64 0.00 0.00 2.27
6519 7020 3.926821 TTTTCGGGCGCTTATCTTTTT 57.073 38.095 7.64 0.00 0.00 1.94
6540 7041 7.793927 TTTTTCTTTCTCTGTCTTCTTCCTC 57.206 36.000 0.00 0.00 0.00 3.71
6541 7042 5.476091 TTCTTTCTCTGTCTTCTTCCTCC 57.524 43.478 0.00 0.00 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.349809 AGCTAGTACTTCTTGGCGAAATAC 58.650 41.667 0.00 0.00 35.21 1.89
1 2 5.126545 TGAGCTAGTACTTCTTGGCGAAATA 59.873 40.000 0.00 0.00 0.00 1.40
2 3 4.081642 TGAGCTAGTACTTCTTGGCGAAAT 60.082 41.667 0.00 0.00 0.00 2.17
3 4 3.257375 TGAGCTAGTACTTCTTGGCGAAA 59.743 43.478 0.00 0.00 0.00 3.46
4 5 2.823747 TGAGCTAGTACTTCTTGGCGAA 59.176 45.455 0.00 0.00 0.00 4.70
5 6 2.443416 TGAGCTAGTACTTCTTGGCGA 58.557 47.619 0.00 0.00 0.00 5.54
6 7 2.941453 TGAGCTAGTACTTCTTGGCG 57.059 50.000 0.00 0.00 0.00 5.69
7 8 3.311048 GCATTGAGCTAGTACTTCTTGGC 59.689 47.826 0.00 0.00 41.15 4.52
8 9 3.873952 GGCATTGAGCTAGTACTTCTTGG 59.126 47.826 0.00 0.00 44.79 3.61
9 10 3.553511 CGGCATTGAGCTAGTACTTCTTG 59.446 47.826 0.00 0.00 44.79 3.02
10 11 3.430929 CCGGCATTGAGCTAGTACTTCTT 60.431 47.826 0.00 0.00 44.79 2.52
11 12 2.101582 CCGGCATTGAGCTAGTACTTCT 59.898 50.000 0.00 0.00 44.79 2.85
12 13 2.100916 TCCGGCATTGAGCTAGTACTTC 59.899 50.000 0.00 0.00 44.79 3.01
13 14 2.108168 TCCGGCATTGAGCTAGTACTT 58.892 47.619 0.00 0.00 44.79 2.24
14 15 1.776662 TCCGGCATTGAGCTAGTACT 58.223 50.000 0.00 0.00 44.79 2.73
15 16 2.035961 TGATCCGGCATTGAGCTAGTAC 59.964 50.000 0.00 0.00 44.79 2.73
16 17 2.297315 CTGATCCGGCATTGAGCTAGTA 59.703 50.000 0.00 0.00 44.79 1.82
17 18 1.069823 CTGATCCGGCATTGAGCTAGT 59.930 52.381 0.00 0.00 44.79 2.57
18 19 1.069823 ACTGATCCGGCATTGAGCTAG 59.930 52.381 0.00 0.00 44.79 3.42
19 20 1.123077 ACTGATCCGGCATTGAGCTA 58.877 50.000 0.00 0.00 44.79 3.32
20 21 0.463295 CACTGATCCGGCATTGAGCT 60.463 55.000 0.00 0.00 44.79 4.09
21 22 1.442526 CCACTGATCCGGCATTGAGC 61.443 60.000 0.00 0.00 44.65 4.26
30 31 3.377172 GTCCCAAATAAACCACTGATCCG 59.623 47.826 0.00 0.00 0.00 4.18
36 37 3.831911 CCATGTGTCCCAAATAAACCACT 59.168 43.478 0.00 0.00 0.00 4.00
146 148 0.676151 GAGGACGGGTAGAGACGTGT 60.676 60.000 0.00 0.00 44.24 4.49
164 166 4.742201 GAAGCGCGCAGGACAGGA 62.742 66.667 35.10 0.00 0.00 3.86
291 294 2.988942 GATTGCTTACATGGCGCGCC 62.989 60.000 42.35 42.35 0.00 6.53
293 296 1.009675 GGATTGCTTACATGGCGCG 60.010 57.895 0.00 0.00 0.00 6.86
323 326 4.091945 CGATCGATTTTCACAGAAAGCTCA 59.908 41.667 10.26 0.00 0.00 4.26
347 350 3.135895 TCCTTTCTAATCCCGGTTGATCC 59.864 47.826 0.00 0.00 0.00 3.36
352 355 3.371595 CCATGTCCTTTCTAATCCCGGTT 60.372 47.826 0.00 0.00 0.00 4.44
353 356 2.172717 CCATGTCCTTTCTAATCCCGGT 59.827 50.000 0.00 0.00 0.00 5.28
356 359 2.952310 GCACCATGTCCTTTCTAATCCC 59.048 50.000 0.00 0.00 0.00 3.85
372 375 2.990740 AATCCCTTAAACTGGCACCA 57.009 45.000 0.00 0.00 0.00 4.17
384 387 9.560860 AATCAAACCCTAATCTTAAAATCCCTT 57.439 29.630 0.00 0.00 0.00 3.95
397 400 5.643777 CACGAAGTCTGAATCAAACCCTAAT 59.356 40.000 0.00 0.00 41.61 1.73
420 423 6.261158 TGTGAAATCAACCTTGAATTCGTACA 59.739 34.615 10.02 7.64 45.53 2.90
494 498 5.163530 AAACGATTTTCGGTGTTTTACCCTT 60.164 36.000 1.69 0.00 39.92 3.95
498 502 5.967088 AGTCAAACGATTTTCGGTGTTTTAC 59.033 36.000 1.69 0.00 39.92 2.01
505 509 4.124238 TCAAGAGTCAAACGATTTTCGGT 58.876 39.130 1.69 0.00 44.55 4.69
506 510 4.725556 TCAAGAGTCAAACGATTTTCGG 57.274 40.909 1.69 0.00 45.59 4.30
515 519 3.181506 GCCGATGGATTCAAGAGTCAAAC 60.182 47.826 0.00 0.00 0.00 2.93
548 552 2.094659 CGTCCGCCTAGCAGTGTTG 61.095 63.158 0.00 0.00 0.00 3.33
549 553 2.261671 CGTCCGCCTAGCAGTGTT 59.738 61.111 0.00 0.00 0.00 3.32
550 554 2.675423 TCGTCCGCCTAGCAGTGT 60.675 61.111 0.00 0.00 0.00 3.55
551 555 1.374343 TAGTCGTCCGCCTAGCAGTG 61.374 60.000 0.00 0.00 0.00 3.66
552 556 0.679002 TTAGTCGTCCGCCTAGCAGT 60.679 55.000 0.00 0.00 0.00 4.40
553 557 0.669077 ATTAGTCGTCCGCCTAGCAG 59.331 55.000 0.00 0.00 0.00 4.24
554 558 1.108776 AATTAGTCGTCCGCCTAGCA 58.891 50.000 0.00 0.00 0.00 3.49
555 559 2.220479 AAATTAGTCGTCCGCCTAGC 57.780 50.000 0.00 0.00 0.00 3.42
556 560 4.535116 GTCTAAATTAGTCGTCCGCCTAG 58.465 47.826 0.00 0.00 0.00 3.02
557 561 3.002656 CGTCTAAATTAGTCGTCCGCCTA 59.997 47.826 10.60 0.00 33.70 3.93
558 562 2.223433 CGTCTAAATTAGTCGTCCGCCT 60.223 50.000 10.60 0.00 33.70 5.52
559 563 2.114825 CGTCTAAATTAGTCGTCCGCC 58.885 52.381 10.60 0.00 33.70 6.13
560 564 2.780557 GTCGTCTAAATTAGTCGTCCGC 59.219 50.000 16.44 5.52 38.25 5.54
561 565 3.181507 TGGTCGTCTAAATTAGTCGTCCG 60.182 47.826 21.75 10.06 43.70 4.79
562 566 4.142513 ACTGGTCGTCTAAATTAGTCGTCC 60.143 45.833 21.03 21.03 42.23 4.79
563 567 4.792189 CACTGGTCGTCTAAATTAGTCGTC 59.208 45.833 16.44 12.11 38.25 4.20
564 568 4.730657 CACTGGTCGTCTAAATTAGTCGT 58.269 43.478 16.44 0.00 38.25 4.34
565 569 3.546670 GCACTGGTCGTCTAAATTAGTCG 59.453 47.826 12.18 12.18 38.40 4.18
566 570 4.326548 GTGCACTGGTCGTCTAAATTAGTC 59.673 45.833 10.32 0.00 0.00 2.59
567 571 4.243270 GTGCACTGGTCGTCTAAATTAGT 58.757 43.478 10.32 0.00 0.00 2.24
568 572 3.303495 CGTGCACTGGTCGTCTAAATTAG 59.697 47.826 16.19 0.00 0.00 1.73
569 573 3.057386 TCGTGCACTGGTCGTCTAAATTA 60.057 43.478 16.19 0.00 0.00 1.40
570 574 2.066262 CGTGCACTGGTCGTCTAAATT 58.934 47.619 16.19 0.00 0.00 1.82
571 575 1.271379 TCGTGCACTGGTCGTCTAAAT 59.729 47.619 16.19 0.00 0.00 1.40
572 576 0.669619 TCGTGCACTGGTCGTCTAAA 59.330 50.000 16.19 0.00 0.00 1.85
573 577 0.039798 GTCGTGCACTGGTCGTCTAA 60.040 55.000 16.19 0.00 0.00 2.10
574 578 1.577922 GTCGTGCACTGGTCGTCTA 59.422 57.895 16.19 0.00 0.00 2.59
575 579 2.335369 GTCGTGCACTGGTCGTCT 59.665 61.111 16.19 0.00 0.00 4.18
576 580 2.797866 ATCGTCGTGCACTGGTCGTC 62.798 60.000 16.19 0.00 0.00 4.20
577 581 2.916052 ATCGTCGTGCACTGGTCGT 61.916 57.895 16.19 3.04 0.00 4.34
578 582 2.126463 ATCGTCGTGCACTGGTCG 60.126 61.111 16.19 13.31 0.00 4.79
579 583 0.666274 TTCATCGTCGTGCACTGGTC 60.666 55.000 16.19 1.56 0.00 4.02
580 584 0.037326 ATTCATCGTCGTGCACTGGT 60.037 50.000 16.19 0.00 0.00 4.00
581 585 0.647410 GATTCATCGTCGTGCACTGG 59.353 55.000 16.19 3.75 0.00 4.00
582 586 0.647410 GGATTCATCGTCGTGCACTG 59.353 55.000 16.19 8.79 0.00 3.66
583 587 0.460284 GGGATTCATCGTCGTGCACT 60.460 55.000 16.19 0.00 0.00 4.40
584 588 0.739462 TGGGATTCATCGTCGTGCAC 60.739 55.000 6.82 6.82 0.00 4.57
585 589 0.460109 CTGGGATTCATCGTCGTGCA 60.460 55.000 0.00 0.00 0.00 4.57
586 590 1.766143 GCTGGGATTCATCGTCGTGC 61.766 60.000 0.00 0.00 0.00 5.34
587 591 1.154205 GGCTGGGATTCATCGTCGTG 61.154 60.000 0.00 0.00 0.00 4.35
588 592 1.144057 GGCTGGGATTCATCGTCGT 59.856 57.895 0.00 0.00 0.00 4.34
589 593 1.143838 TGGCTGGGATTCATCGTCG 59.856 57.895 0.00 0.00 0.00 5.12
590 594 0.815615 GGTGGCTGGGATTCATCGTC 60.816 60.000 0.00 0.00 0.00 4.20
591 595 1.224592 GGTGGCTGGGATTCATCGT 59.775 57.895 0.00 0.00 0.00 3.73
592 596 1.889105 CGGTGGCTGGGATTCATCG 60.889 63.158 0.00 0.00 0.00 3.84
593 597 0.107214 TTCGGTGGCTGGGATTCATC 60.107 55.000 0.00 0.00 0.00 2.92
594 598 0.331278 TTTCGGTGGCTGGGATTCAT 59.669 50.000 0.00 0.00 0.00 2.57
595 599 0.608035 GTTTCGGTGGCTGGGATTCA 60.608 55.000 0.00 0.00 0.00 2.57
596 600 0.322546 AGTTTCGGTGGCTGGGATTC 60.323 55.000 0.00 0.00 0.00 2.52
597 601 0.322546 GAGTTTCGGTGGCTGGGATT 60.323 55.000 0.00 0.00 0.00 3.01
598 602 1.299976 GAGTTTCGGTGGCTGGGAT 59.700 57.895 0.00 0.00 0.00 3.85
599 603 2.747686 GAGTTTCGGTGGCTGGGA 59.252 61.111 0.00 0.00 0.00 4.37
600 604 2.742372 CGAGTTTCGGTGGCTGGG 60.742 66.667 0.00 0.00 36.00 4.45
601 605 2.027625 GACGAGTTTCGGTGGCTGG 61.028 63.158 3.37 0.00 45.59 4.85
602 606 2.027625 GGACGAGTTTCGGTGGCTG 61.028 63.158 3.37 0.00 45.59 4.85
603 607 2.342648 GGACGAGTTTCGGTGGCT 59.657 61.111 3.37 0.00 45.59 4.75
604 608 2.029964 TGGACGAGTTTCGGTGGC 59.970 61.111 3.37 0.00 45.59 5.01
605 609 0.944311 CTGTGGACGAGTTTCGGTGG 60.944 60.000 3.37 0.00 45.59 4.61
606 610 1.557443 GCTGTGGACGAGTTTCGGTG 61.557 60.000 3.37 0.00 45.59 4.94
607 611 1.300697 GCTGTGGACGAGTTTCGGT 60.301 57.895 3.37 0.00 45.59 4.69
608 612 2.027625 GGCTGTGGACGAGTTTCGG 61.028 63.158 3.37 0.00 45.59 4.30
609 613 2.027625 GGGCTGTGGACGAGTTTCG 61.028 63.158 0.00 0.00 46.93 3.46
610 614 1.070786 TGGGCTGTGGACGAGTTTC 59.929 57.895 0.00 0.00 0.00 2.78
611 615 1.227853 GTGGGCTGTGGACGAGTTT 60.228 57.895 0.00 0.00 0.00 2.66
612 616 2.426023 GTGGGCTGTGGACGAGTT 59.574 61.111 0.00 0.00 0.00 3.01
613 617 2.842462 TGTGGGCTGTGGACGAGT 60.842 61.111 0.00 0.00 0.00 4.18
614 618 2.357517 GTGTGGGCTGTGGACGAG 60.358 66.667 0.00 0.00 0.00 4.18
615 619 2.842462 AGTGTGGGCTGTGGACGA 60.842 61.111 0.00 0.00 0.00 4.20
616 620 2.357517 GAGTGTGGGCTGTGGACG 60.358 66.667 0.00 0.00 0.00 4.79
617 621 1.302033 CAGAGTGTGGGCTGTGGAC 60.302 63.158 0.00 0.00 0.00 4.02
618 622 1.344953 AACAGAGTGTGGGCTGTGGA 61.345 55.000 0.00 0.00 44.06 4.02
619 623 0.886490 GAACAGAGTGTGGGCTGTGG 60.886 60.000 0.00 0.00 44.06 4.17
620 624 1.224069 CGAACAGAGTGTGGGCTGTG 61.224 60.000 0.00 0.00 44.06 3.66
621 625 1.069765 CGAACAGAGTGTGGGCTGT 59.930 57.895 0.00 0.00 46.59 4.40
622 626 2.320587 GCGAACAGAGTGTGGGCTG 61.321 63.158 0.00 0.00 38.10 4.85
623 627 2.031163 GCGAACAGAGTGTGGGCT 59.969 61.111 0.00 0.00 0.00 5.19
624 628 2.031163 AGCGAACAGAGTGTGGGC 59.969 61.111 0.00 0.00 31.88 5.36
625 629 1.669115 CCAGCGAACAGAGTGTGGG 60.669 63.158 0.00 0.00 0.00 4.61
626 630 0.036952 ATCCAGCGAACAGAGTGTGG 60.037 55.000 0.00 0.00 0.00 4.17
627 631 1.800805 AATCCAGCGAACAGAGTGTG 58.199 50.000 0.00 0.00 0.00 3.82
628 632 2.550830 AAATCCAGCGAACAGAGTGT 57.449 45.000 0.00 0.00 0.00 3.55
629 633 4.393062 ACAATAAATCCAGCGAACAGAGTG 59.607 41.667 0.00 0.00 0.00 3.51
630 634 4.579869 ACAATAAATCCAGCGAACAGAGT 58.420 39.130 0.00 0.00 0.00 3.24
631 635 4.259970 CGACAATAAATCCAGCGAACAGAG 60.260 45.833 0.00 0.00 0.00 3.35
632 636 3.616821 CGACAATAAATCCAGCGAACAGA 59.383 43.478 0.00 0.00 0.00 3.41
633 637 3.370978 ACGACAATAAATCCAGCGAACAG 59.629 43.478 0.00 0.00 0.00 3.16
634 638 3.331150 ACGACAATAAATCCAGCGAACA 58.669 40.909 0.00 0.00 0.00 3.18
635 639 4.142988 TGAACGACAATAAATCCAGCGAAC 60.143 41.667 0.00 0.00 0.00 3.95
636 640 3.997681 TGAACGACAATAAATCCAGCGAA 59.002 39.130 0.00 0.00 0.00 4.70
637 641 3.591023 TGAACGACAATAAATCCAGCGA 58.409 40.909 0.00 0.00 0.00 4.93
638 642 4.274069 CATGAACGACAATAAATCCAGCG 58.726 43.478 0.00 0.00 0.00 5.18
639 643 4.335315 TCCATGAACGACAATAAATCCAGC 59.665 41.667 0.00 0.00 0.00 4.85
640 644 6.564686 CGATCCATGAACGACAATAAATCCAG 60.565 42.308 0.00 0.00 29.49 3.86
641 645 5.236263 CGATCCATGAACGACAATAAATCCA 59.764 40.000 0.00 0.00 29.49 3.41
642 646 5.334105 CCGATCCATGAACGACAATAAATCC 60.334 44.000 0.00 0.00 29.49 3.01
643 647 5.679906 CCGATCCATGAACGACAATAAATC 58.320 41.667 0.00 0.00 29.49 2.17
644 648 4.024048 GCCGATCCATGAACGACAATAAAT 60.024 41.667 0.00 0.00 29.49 1.40
645 649 3.311322 GCCGATCCATGAACGACAATAAA 59.689 43.478 0.00 0.00 29.49 1.40
646 650 2.869801 GCCGATCCATGAACGACAATAA 59.130 45.455 0.00 0.00 29.49 1.40
647 651 2.479837 GCCGATCCATGAACGACAATA 58.520 47.619 0.00 0.00 29.49 1.90
648 652 1.299541 GCCGATCCATGAACGACAAT 58.700 50.000 0.00 0.00 29.49 2.71
649 653 0.742990 GGCCGATCCATGAACGACAA 60.743 55.000 0.00 0.00 29.49 3.18
650 654 1.153449 GGCCGATCCATGAACGACA 60.153 57.895 0.00 0.00 29.49 4.35
651 655 1.153449 TGGCCGATCCATGAACGAC 60.153 57.895 0.00 0.00 40.72 4.34
652 656 3.304251 TGGCCGATCCATGAACGA 58.696 55.556 0.00 0.00 40.72 3.85
659 663 0.179048 GACATCATGTGGCCGATCCA 60.179 55.000 0.00 0.00 44.18 3.41
660 664 1.224069 CGACATCATGTGGCCGATCC 61.224 60.000 0.00 0.00 29.16 3.36
661 665 0.530650 ACGACATCATGTGGCCGATC 60.531 55.000 0.00 0.00 33.92 3.69
662 666 0.811219 CACGACATCATGTGGCCGAT 60.811 55.000 0.00 0.00 33.92 4.18
663 667 1.447663 CACGACATCATGTGGCCGA 60.448 57.895 0.00 0.00 33.92 5.54
664 668 1.741401 ACACGACATCATGTGGCCG 60.741 57.895 0.00 0.00 40.39 6.13
665 669 1.796151 CACACGACATCATGTGGCC 59.204 57.895 0.00 0.00 42.08 5.36
669 673 1.941209 GCTCCACACACGACATCATGT 60.941 52.381 0.00 0.00 0.00 3.21
670 674 0.723414 GCTCCACACACGACATCATG 59.277 55.000 0.00 0.00 0.00 3.07
671 675 0.321346 TGCTCCACACACGACATCAT 59.679 50.000 0.00 0.00 0.00 2.45
672 676 0.105778 TTGCTCCACACACGACATCA 59.894 50.000 0.00 0.00 0.00 3.07
673 677 1.442769 ATTGCTCCACACACGACATC 58.557 50.000 0.00 0.00 0.00 3.06
674 678 1.806542 GAATTGCTCCACACACGACAT 59.193 47.619 0.00 0.00 0.00 3.06
675 679 1.225855 GAATTGCTCCACACACGACA 58.774 50.000 0.00 0.00 0.00 4.35
676 680 0.517316 GGAATTGCTCCACACACGAC 59.483 55.000 0.00 0.00 44.67 4.34
677 681 0.948623 CGGAATTGCTCCACACACGA 60.949 55.000 0.00 0.00 45.74 4.35
678 682 1.497278 CGGAATTGCTCCACACACG 59.503 57.895 0.00 0.00 45.74 4.49
679 683 1.875963 CCGGAATTGCTCCACACAC 59.124 57.895 0.00 0.00 45.74 3.82
680 684 1.971167 GCCGGAATTGCTCCACACA 60.971 57.895 5.05 0.00 45.74 3.72
681 685 1.315257 ATGCCGGAATTGCTCCACAC 61.315 55.000 5.05 0.00 45.74 3.82
682 686 0.611618 AATGCCGGAATTGCTCCACA 60.612 50.000 6.94 0.00 45.74 4.17
683 687 1.388547 TAATGCCGGAATTGCTCCAC 58.611 50.000 18.71 0.00 45.74 4.02
684 688 2.363306 ATAATGCCGGAATTGCTCCA 57.637 45.000 18.71 0.00 45.74 3.86
685 689 4.702131 AGATAATAATGCCGGAATTGCTCC 59.298 41.667 18.71 3.37 41.40 4.70
686 690 5.634896 CAGATAATAATGCCGGAATTGCTC 58.365 41.667 18.71 8.66 0.00 4.26
687 691 4.082571 GCAGATAATAATGCCGGAATTGCT 60.083 41.667 18.71 6.98 36.41 3.91
688 692 4.168760 GCAGATAATAATGCCGGAATTGC 58.831 43.478 18.71 7.62 36.41 3.56
719 723 4.210331 GTTGGATAACATGCTTCCATCCT 58.790 43.478 11.42 0.00 39.22 3.24
722 726 3.299503 GGGTTGGATAACATGCTTCCAT 58.700 45.455 11.42 0.00 39.22 3.41
843 847 1.263776 CTAAACGCACGAGCAGAGAG 58.736 55.000 5.50 0.00 42.27 3.20
844 848 0.732880 GCTAAACGCACGAGCAGAGA 60.733 55.000 5.50 0.00 42.27 3.10
1655 1671 1.804748 ACTGTAAAAACCTAGCAGCGC 59.195 47.619 0.00 0.00 0.00 5.92
1733 1750 2.870411 ACTAGCAACGAACAAGAACCAC 59.130 45.455 0.00 0.00 0.00 4.16
1781 1804 5.579511 GCTGGAAGTTAGCGAACAATTAGTA 59.420 40.000 12.42 0.00 38.10 1.82
1906 1932 7.316544 ACTTTAGCATACAAAAATAGGACGG 57.683 36.000 0.00 0.00 0.00 4.79
2077 2111 9.636965 GACAGCTTGTTGTGAAAAATTAAATTC 57.363 29.630 0.00 0.00 0.00 2.17
2110 2146 9.817809 CATGTGGTCATACTAACATAAACTACT 57.182 33.333 0.00 0.00 32.15 2.57
2154 2190 5.538118 TGTGTAGATACTAATTCCGCCATG 58.462 41.667 0.00 0.00 0.00 3.66
2275 2311 4.119136 CCACACCCTTCACAAAATGTTTC 58.881 43.478 0.00 0.00 0.00 2.78
2295 2395 2.107953 GCCGCTTTGTTTTGCCCA 59.892 55.556 0.00 0.00 0.00 5.36
2335 2435 3.068732 TGAGAGTATCCATTCTTCTGGCG 59.931 47.826 0.00 0.00 36.16 5.69
2482 2582 8.806146 CAAATATAAGGGGGAAACAGAATATGG 58.194 37.037 0.00 0.00 0.00 2.74
2489 2589 3.641436 GGCCAAATATAAGGGGGAAACAG 59.359 47.826 0.00 0.00 0.00 3.16
2491 2591 3.923648 AGGCCAAATATAAGGGGGAAAC 58.076 45.455 5.01 0.00 0.00 2.78
2495 2595 3.230976 GTCAAGGCCAAATATAAGGGGG 58.769 50.000 5.01 0.00 0.00 5.40
2519 2619 9.220767 GACTATGATTGAAGAAAACCAGTAAGT 57.779 33.333 0.00 0.00 0.00 2.24
2545 2645 5.526846 GGGCTCAAAAGATAGTCAATGAGAG 59.473 44.000 4.87 0.00 37.14 3.20
2547 2647 5.296283 CAGGGCTCAAAAGATAGTCAATGAG 59.704 44.000 0.00 0.00 37.83 2.90
2627 2735 2.160417 CCCATCGAGCAAGAGTTGTTTC 59.840 50.000 0.00 0.00 0.00 2.78
2648 2756 3.243301 CCAATGCACATCCAGCAATAGTC 60.243 47.826 0.00 0.00 46.27 2.59
2725 2836 9.620259 AGCCTTTTGGACAAAATTTAATTGTAA 57.380 25.926 10.31 0.00 40.90 2.41
2733 2844 5.942826 TCAAACAGCCTTTTGGACAAAATTT 59.057 32.000 10.31 5.69 44.07 1.82
2827 2938 2.101415 AGGTTTGCTGGAAAGAAACTGC 59.899 45.455 0.00 0.00 31.54 4.40
2836 2947 3.631250 ACTCAAAGAAGGTTTGCTGGAA 58.369 40.909 0.00 0.00 0.00 3.53
2837 2948 3.297134 ACTCAAAGAAGGTTTGCTGGA 57.703 42.857 0.00 0.00 0.00 3.86
2838 2949 4.142182 TGAAACTCAAAGAAGGTTTGCTGG 60.142 41.667 0.00 0.00 34.00 4.85
2839 2950 4.997565 TGAAACTCAAAGAAGGTTTGCTG 58.002 39.130 0.00 0.00 34.00 4.41
2840 2951 4.706962 ACTGAAACTCAAAGAAGGTTTGCT 59.293 37.500 0.00 0.00 34.00 3.91
2841 2952 4.998788 ACTGAAACTCAAAGAAGGTTTGC 58.001 39.130 0.00 0.00 34.00 3.68
2842 2953 7.315890 AGAAACTGAAACTCAAAGAAGGTTTG 58.684 34.615 0.00 0.00 34.00 2.93
2843 2954 7.468141 AGAAACTGAAACTCAAAGAAGGTTT 57.532 32.000 0.00 0.00 36.12 3.27
2844 2955 7.468141 AAGAAACTGAAACTCAAAGAAGGTT 57.532 32.000 0.00 0.00 0.00 3.50
2845 2956 7.363007 GGAAAGAAACTGAAACTCAAAGAAGGT 60.363 37.037 0.00 0.00 0.00 3.50
2846 2957 6.975197 GGAAAGAAACTGAAACTCAAAGAAGG 59.025 38.462 0.00 0.00 0.00 3.46
2847 2958 7.538575 TGGAAAGAAACTGAAACTCAAAGAAG 58.461 34.615 0.00 0.00 0.00 2.85
2848 2959 7.176690 ACTGGAAAGAAACTGAAACTCAAAGAA 59.823 33.333 0.00 0.00 0.00 2.52
2849 2960 6.659242 ACTGGAAAGAAACTGAAACTCAAAGA 59.341 34.615 0.00 0.00 0.00 2.52
2850 2961 6.856895 ACTGGAAAGAAACTGAAACTCAAAG 58.143 36.000 0.00 0.00 0.00 2.77
2851 2962 6.834168 ACTGGAAAGAAACTGAAACTCAAA 57.166 33.333 0.00 0.00 0.00 2.69
2852 2963 7.931578 TTACTGGAAAGAAACTGAAACTCAA 57.068 32.000 0.00 0.00 0.00 3.02
2853 2964 7.148137 GGTTTACTGGAAAGAAACTGAAACTCA 60.148 37.037 0.00 0.00 34.26 3.41
2854 2965 7.067129 AGGTTTACTGGAAAGAAACTGAAACTC 59.933 37.037 0.00 0.00 34.26 3.01
2855 2966 6.890268 AGGTTTACTGGAAAGAAACTGAAACT 59.110 34.615 0.00 0.00 34.26 2.66
2856 2967 7.096884 AGGTTTACTGGAAAGAAACTGAAAC 57.903 36.000 0.00 0.00 34.26 2.78
2857 2968 7.614192 AGAAGGTTTACTGGAAAGAAACTGAAA 59.386 33.333 0.00 0.00 34.26 2.69
2858 2969 7.116736 AGAAGGTTTACTGGAAAGAAACTGAA 58.883 34.615 0.00 0.00 34.26 3.02
2859 2970 6.659824 AGAAGGTTTACTGGAAAGAAACTGA 58.340 36.000 0.00 0.00 34.26 3.41
2860 2971 6.944234 AGAAGGTTTACTGGAAAGAAACTG 57.056 37.500 0.00 0.00 34.26 3.16
2861 2972 7.614192 TCAAAGAAGGTTTACTGGAAAGAAACT 59.386 33.333 0.00 0.00 34.26 2.66
2862 2973 7.768240 TCAAAGAAGGTTTACTGGAAAGAAAC 58.232 34.615 0.00 0.00 33.27 2.78
2863 2974 7.614192 ACTCAAAGAAGGTTTACTGGAAAGAAA 59.386 33.333 0.00 0.00 0.00 2.52
2864 2975 7.116736 ACTCAAAGAAGGTTTACTGGAAAGAA 58.883 34.615 0.00 0.00 0.00 2.52
2865 2976 6.659824 ACTCAAAGAAGGTTTACTGGAAAGA 58.340 36.000 0.00 0.00 0.00 2.52
2866 2977 6.944234 ACTCAAAGAAGGTTTACTGGAAAG 57.056 37.500 0.00 0.00 0.00 2.62
2867 2978 7.394923 TGAAACTCAAAGAAGGTTTACTGGAAA 59.605 33.333 0.00 0.00 34.00 3.13
2877 2988 7.363007 GGAAAGAAACTGAAACTCAAAGAAGGT 60.363 37.037 0.00 0.00 0.00 3.50
2908 3020 7.289782 ACATATCCTAGCAGAACTGAATCTTCT 59.710 37.037 5.97 0.00 0.00 2.85
2966 3079 2.348998 AGGAGCGCCTTCCACAAG 59.651 61.111 17.13 0.00 43.90 3.16
2977 3090 8.847567 CGTATGTAGTTATGTTAATAAGGAGCG 58.152 37.037 0.00 0.00 0.00 5.03
2985 3098 9.731819 CTCACTGACGTATGTAGTTATGTTAAT 57.268 33.333 0.00 0.00 0.00 1.40
2996 3109 5.300411 TCCTATCCTCACTGACGTATGTA 57.700 43.478 0.00 0.00 0.00 2.29
3090 3204 0.472925 TGGAACCAGTAGGCAGGTCA 60.473 55.000 0.00 0.00 37.07 4.02
3116 3230 3.499918 ACTAAAGAGTGCATCAGTTGTGC 59.500 43.478 0.00 0.00 42.81 4.57
3130 3244 4.142881 GCGTAGGGCAAAAGAACTAAAGAG 60.143 45.833 0.00 0.00 42.87 2.85
3153 3267 8.637196 TCATAGTATAGTGACCATAGTCCAAG 57.363 38.462 0.00 0.00 42.81 3.61
3154 3268 9.601810 ATTCATAGTATAGTGACCATAGTCCAA 57.398 33.333 0.00 0.00 42.81 3.53
3183 3297 8.256605 GCTCTTCTAGATATAATCATCTTGCCA 58.743 37.037 0.00 0.00 36.63 4.92
3194 3308 9.692749 CGGTAAAACATGCTCTTCTAGATATAA 57.307 33.333 0.00 0.00 0.00 0.98
3195 3309 7.813148 GCGGTAAAACATGCTCTTCTAGATATA 59.187 37.037 0.00 0.00 0.00 0.86
3196 3310 6.647067 GCGGTAAAACATGCTCTTCTAGATAT 59.353 38.462 0.00 0.00 0.00 1.63
3197 3311 5.983720 GCGGTAAAACATGCTCTTCTAGATA 59.016 40.000 0.00 0.00 0.00 1.98
3198 3312 4.811557 GCGGTAAAACATGCTCTTCTAGAT 59.188 41.667 0.00 0.00 0.00 1.98
3199 3313 4.181578 GCGGTAAAACATGCTCTTCTAGA 58.818 43.478 0.00 0.00 0.00 2.43
3200 3314 3.932710 TGCGGTAAAACATGCTCTTCTAG 59.067 43.478 0.00 0.00 0.00 2.43
3201 3315 3.932822 TGCGGTAAAACATGCTCTTCTA 58.067 40.909 0.00 0.00 0.00 2.10
3202 3316 2.778299 TGCGGTAAAACATGCTCTTCT 58.222 42.857 0.00 0.00 0.00 2.85
3203 3317 3.492313 CTTGCGGTAAAACATGCTCTTC 58.508 45.455 0.00 0.00 0.00 2.87
3237 3351 0.837272 TTCCCACCACTAGGCTATGC 59.163 55.000 0.00 0.00 39.06 3.14
3238 3352 1.417890 CCTTCCCACCACTAGGCTATG 59.582 57.143 0.00 0.00 39.06 2.23
3239 3353 1.695989 CCCTTCCCACCACTAGGCTAT 60.696 57.143 0.00 0.00 39.06 2.97
3240 3354 0.326238 CCCTTCCCACCACTAGGCTA 60.326 60.000 0.00 0.00 39.06 3.93
3241 3355 1.616628 CCCTTCCCACCACTAGGCT 60.617 63.158 0.00 0.00 39.06 4.58
3242 3356 2.680370 CCCCTTCCCACCACTAGGC 61.680 68.421 0.00 0.00 39.06 3.93
3243 3357 0.845102 AACCCCTTCCCACCACTAGG 60.845 60.000 0.00 0.00 42.21 3.02
3244 3358 0.328258 CAACCCCTTCCCACCACTAG 59.672 60.000 0.00 0.00 0.00 2.57
3245 3359 0.104356 TCAACCCCTTCCCACCACTA 60.104 55.000 0.00 0.00 0.00 2.74
3246 3360 0.776080 ATCAACCCCTTCCCACCACT 60.776 55.000 0.00 0.00 0.00 4.00
3247 3361 0.611896 CATCAACCCCTTCCCACCAC 60.612 60.000 0.00 0.00 0.00 4.16
3248 3362 1.773635 CATCAACCCCTTCCCACCA 59.226 57.895 0.00 0.00 0.00 4.17
3249 3363 1.682344 GCATCAACCCCTTCCCACC 60.682 63.158 0.00 0.00 0.00 4.61
3250 3364 1.682344 GGCATCAACCCCTTCCCAC 60.682 63.158 0.00 0.00 0.00 4.61
3251 3365 1.442886 AAGGCATCAACCCCTTCCCA 61.443 55.000 0.00 0.00 36.78 4.37
3252 3366 1.388133 AAGGCATCAACCCCTTCCC 59.612 57.895 0.00 0.00 36.78 3.97
3255 3369 1.388133 GGGAAGGCATCAACCCCTT 59.612 57.895 0.00 0.00 43.87 3.95
3256 3370 1.856873 TGGGAAGGCATCAACCCCT 60.857 57.895 0.00 0.00 41.44 4.79
3257 3371 1.682344 GTGGGAAGGCATCAACCCC 60.682 63.158 0.00 0.00 41.44 4.95
3258 3372 1.682344 GGTGGGAAGGCATCAACCC 60.682 63.158 0.00 0.00 42.37 4.11
3259 3373 1.682344 GGGTGGGAAGGCATCAACC 60.682 63.158 5.53 5.53 36.20 3.77
3260 3374 1.076549 TGGGTGGGAAGGCATCAAC 59.923 57.895 0.00 0.00 0.00 3.18
3261 3375 1.076549 GTGGGTGGGAAGGCATCAA 59.923 57.895 0.00 0.00 0.00 2.57
3262 3376 2.763215 GTGGGTGGGAAGGCATCA 59.237 61.111 0.00 0.00 0.00 3.07
3263 3377 2.043953 GGTGGGTGGGAAGGCATC 60.044 66.667 0.00 0.00 0.00 3.91
3264 3378 3.672503 GGGTGGGTGGGAAGGCAT 61.673 66.667 0.00 0.00 0.00 4.40
3266 3380 4.366684 CTGGGTGGGTGGGAAGGC 62.367 72.222 0.00 0.00 0.00 4.35
3267 3381 3.661648 CCTGGGTGGGTGGGAAGG 61.662 72.222 0.00 0.00 0.00 3.46
3268 3382 2.426305 GAACCTGGGTGGGTGGGAAG 62.426 65.000 0.00 0.00 39.85 3.46
3269 3383 2.370403 AACCTGGGTGGGTGGGAA 60.370 61.111 0.00 0.00 39.85 3.97
3270 3384 2.856988 GAACCTGGGTGGGTGGGA 60.857 66.667 0.00 0.00 39.85 4.37
3271 3385 2.713531 CTTGAACCTGGGTGGGTGGG 62.714 65.000 0.00 0.00 39.85 4.61
3272 3386 1.228552 CTTGAACCTGGGTGGGTGG 60.229 63.158 0.00 0.00 39.85 4.61
3273 3387 1.228552 CCTTGAACCTGGGTGGGTG 60.229 63.158 0.00 0.00 39.85 4.61
3274 3388 3.146828 GCCTTGAACCTGGGTGGGT 62.147 63.158 0.00 0.00 42.05 4.51
3275 3389 2.283173 GCCTTGAACCTGGGTGGG 60.283 66.667 0.00 0.00 41.11 4.61
3276 3390 1.077265 ATGCCTTGAACCTGGGTGG 59.923 57.895 0.00 0.00 42.93 4.61
3277 3391 1.252904 CCATGCCTTGAACCTGGGTG 61.253 60.000 0.00 0.00 0.00 4.61
3278 3392 1.077265 CCATGCCTTGAACCTGGGT 59.923 57.895 0.00 0.00 0.00 4.51
3279 3393 0.331278 TACCATGCCTTGAACCTGGG 59.669 55.000 0.00 0.00 0.00 4.45
3280 3394 1.004745 AGTACCATGCCTTGAACCTGG 59.995 52.381 0.00 0.00 0.00 4.45
3281 3395 2.489329 CAAGTACCATGCCTTGAACCTG 59.511 50.000 10.72 0.00 40.36 4.00
3282 3396 2.795329 CAAGTACCATGCCTTGAACCT 58.205 47.619 10.72 0.00 40.36 3.50
3283 3397 1.202348 GCAAGTACCATGCCTTGAACC 59.798 52.381 17.22 2.20 40.36 3.62
3284 3398 1.885887 TGCAAGTACCATGCCTTGAAC 59.114 47.619 16.17 5.82 43.16 3.18
3285 3399 2.284754 TGCAAGTACCATGCCTTGAA 57.715 45.000 16.17 7.93 43.16 2.69
3286 3400 2.284754 TTGCAAGTACCATGCCTTGA 57.715 45.000 16.17 0.00 43.16 3.02
3287 3401 3.598019 AATTGCAAGTACCATGCCTTG 57.402 42.857 16.17 11.51 43.16 3.61
3288 3402 3.306919 CCAAATTGCAAGTACCATGCCTT 60.307 43.478 16.17 8.78 43.16 4.35
3289 3403 2.234414 CCAAATTGCAAGTACCATGCCT 59.766 45.455 16.17 3.91 43.16 4.75
3290 3404 2.620242 CCAAATTGCAAGTACCATGCC 58.380 47.619 16.17 2.49 43.16 4.40
3291 3405 2.028203 ACCCAAATTGCAAGTACCATGC 60.028 45.455 4.94 12.96 44.08 4.06
3292 3406 3.959535 ACCCAAATTGCAAGTACCATG 57.040 42.857 4.94 0.00 0.00 3.66
3293 3407 4.102367 ACAAACCCAAATTGCAAGTACCAT 59.898 37.500 4.94 0.00 0.00 3.55
3294 3408 3.452627 ACAAACCCAAATTGCAAGTACCA 59.547 39.130 4.94 0.00 0.00 3.25
3295 3409 4.066646 ACAAACCCAAATTGCAAGTACC 57.933 40.909 4.94 0.00 0.00 3.34
3296 3410 4.260579 GCAACAAACCCAAATTGCAAGTAC 60.261 41.667 4.94 0.00 45.38 2.73
3297 3411 3.873952 GCAACAAACCCAAATTGCAAGTA 59.126 39.130 4.94 0.00 45.38 2.24
3298 3412 2.682352 GCAACAAACCCAAATTGCAAGT 59.318 40.909 4.94 0.00 45.38 3.16
3299 3413 3.337301 GCAACAAACCCAAATTGCAAG 57.663 42.857 4.94 0.00 45.38 4.01
3302 3416 1.333308 GGTGCAACAAACCCAAATTGC 59.667 47.619 0.00 0.94 46.08 3.56
3303 3417 2.636830 TGGTGCAACAAACCCAAATTG 58.363 42.857 0.00 0.00 39.98 2.32
3304 3418 3.356529 TTGGTGCAACAAACCCAAATT 57.643 38.095 16.46 0.00 39.98 1.82
3305 3419 3.574354 ATTGGTGCAACAAACCCAAAT 57.426 38.095 23.14 0.00 40.16 2.32
3306 3420 3.356529 AATTGGTGCAACAAACCCAAA 57.643 38.095 23.14 0.00 40.16 3.28
3307 3421 4.696479 ATAATTGGTGCAACAAACCCAA 57.304 36.364 23.14 14.03 39.98 4.12
3308 3422 4.835615 AGTATAATTGGTGCAACAAACCCA 59.164 37.500 23.14 3.95 39.98 4.51
3309 3423 5.167845 CAGTATAATTGGTGCAACAAACCC 58.832 41.667 23.14 7.99 39.98 4.11
3310 3424 5.778862 ACAGTATAATTGGTGCAACAAACC 58.221 37.500 23.14 7.62 39.98 3.27
3311 3425 7.027161 CCTACAGTATAATTGGTGCAACAAAC 58.973 38.462 23.14 15.04 39.98 2.93
3312 3426 6.151985 CCCTACAGTATAATTGGTGCAACAAA 59.848 38.462 23.14 6.25 39.98 2.83
3313 3427 5.650266 CCCTACAGTATAATTGGTGCAACAA 59.350 40.000 21.46 21.46 39.98 2.83
3314 3428 5.189928 CCCTACAGTATAATTGGTGCAACA 58.810 41.667 0.00 0.00 39.98 3.33
3315 3429 4.578928 CCCCTACAGTATAATTGGTGCAAC 59.421 45.833 0.00 0.00 0.00 4.17
3316 3430 4.385865 CCCCCTACAGTATAATTGGTGCAA 60.386 45.833 0.00 0.00 0.00 4.08
3317 3431 3.137544 CCCCCTACAGTATAATTGGTGCA 59.862 47.826 0.00 0.00 0.00 4.57
3318 3432 3.137728 ACCCCCTACAGTATAATTGGTGC 59.862 47.826 0.00 0.00 0.00 5.01
3319 3433 5.374071 GAACCCCCTACAGTATAATTGGTG 58.626 45.833 0.00 0.00 0.00 4.17
3320 3434 4.414514 GGAACCCCCTACAGTATAATTGGT 59.585 45.833 0.00 0.00 0.00 3.67
3321 3435 4.981812 GGAACCCCCTACAGTATAATTGG 58.018 47.826 0.00 0.00 0.00 3.16
3335 3449 6.627612 CAGAAAGACTGTAAGGGAACCCCC 62.628 54.167 6.23 0.00 45.84 5.40
3336 3450 3.559384 CAGAAAGACTGTAAGGGAACCCC 60.559 52.174 6.23 0.00 45.84 4.95
3337 3451 3.676093 CAGAAAGACTGTAAGGGAACCC 58.324 50.000 0.94 0.94 45.84 4.11
3415 3877 2.442212 TTAACACGTTCGGCATCTCA 57.558 45.000 0.00 0.00 0.00 3.27
3550 4012 6.594284 TCACTTATTGCTTCATCTTCATCG 57.406 37.500 0.00 0.00 0.00 3.84
3745 4210 4.873746 ACGTCTTCCTTCTGATCTCAAA 57.126 40.909 0.00 0.00 0.00 2.69
3748 4213 3.378742 TGCTACGTCTTCCTTCTGATCTC 59.621 47.826 0.00 0.00 0.00 2.75
3850 4315 7.701078 TCTCTTCGTGAAGAATAATTACTTCCG 59.299 37.037 12.94 12.87 45.75 4.30
3910 4375 5.049405 AGCAAATCGTGAACTGGAACTTAAG 60.049 40.000 0.00 0.00 0.00 1.85
4571 5044 8.428063 TGGAATCAAGTTGGTAATTTTCAACAT 58.572 29.630 19.06 9.58 43.91 2.71
4629 5106 4.147321 AGGTCAAACGGAAGAGTAGTACA 58.853 43.478 2.52 0.00 0.00 2.90
4684 5168 4.521075 GCATGGAGCGAGCACTTA 57.479 55.556 0.00 0.00 0.00 2.24
4798 5282 6.060028 TCGGCAATCTACATAAAGCATTTC 57.940 37.500 0.00 0.00 40.09 2.17
4900 5384 1.003580 GTCCAGCTCTCCCAAACATCA 59.996 52.381 0.00 0.00 0.00 3.07
4942 5426 0.249031 GGTTGACCAGTTTGCAGCAC 60.249 55.000 0.00 0.00 35.64 4.40
4988 5472 8.187480 TGTTATGTGCATAAAATGGTGATACAC 58.813 33.333 6.24 0.00 35.30 2.90
5045 5529 2.511600 GCCATTGGGACGAGGACG 60.512 66.667 4.53 0.00 39.09 4.79
5050 5534 3.094386 GCTATTGCCATTGGGACGA 57.906 52.632 4.53 0.00 35.59 4.20
5062 5546 7.279090 TGCAATGAAAATGAAGATTGGCTATTG 59.721 33.333 0.00 0.00 0.00 1.90
5069 5553 7.801315 CCTGTTTTGCAATGAAAATGAAGATTG 59.199 33.333 0.00 0.00 0.00 2.67
5076 5560 4.815308 TGGTCCTGTTTTGCAATGAAAATG 59.185 37.500 0.00 0.00 0.00 2.32
5085 5569 3.957497 ACATTAACTGGTCCTGTTTTGCA 59.043 39.130 18.17 0.00 0.00 4.08
5086 5570 4.584327 ACATTAACTGGTCCTGTTTTGC 57.416 40.909 18.17 0.00 0.00 3.68
5099 5583 2.262637 TCCCGGTCCAGAACATTAACT 58.737 47.619 0.00 0.00 0.00 2.24
5116 5600 0.682855 TCATGGCGGTGGAAATTCCC 60.683 55.000 9.87 0.79 35.03 3.97
5164 5652 6.933514 AACCACCATCAGGAAACAAAATAT 57.066 33.333 0.00 0.00 38.69 1.28
5168 5656 6.546428 TTTAAACCACCATCAGGAAACAAA 57.454 33.333 0.00 0.00 38.69 2.83
5184 5672 3.498082 CAGCCTACGCACAATTTAAACC 58.502 45.455 0.00 0.00 37.52 3.27
5188 5676 1.814793 TGCAGCCTACGCACAATTTA 58.185 45.000 0.00 0.00 37.52 1.40
5196 5684 2.182842 CCTCCAATGCAGCCTACGC 61.183 63.158 0.00 0.00 0.00 4.42
5197 5685 0.811616 GACCTCCAATGCAGCCTACG 60.812 60.000 0.00 0.00 0.00 3.51
5199 5687 2.174685 TAGACCTCCAATGCAGCCTA 57.825 50.000 0.00 0.00 0.00 3.93
5206 5694 5.890985 AGGATCTCGATATAGACCTCCAATG 59.109 44.000 9.98 0.00 30.18 2.82
5370 5859 6.969993 ACTTAACACTTGGCAGGAAAATAA 57.030 33.333 2.65 0.00 0.00 1.40
5372 5861 5.869649 AACTTAACACTTGGCAGGAAAAT 57.130 34.783 2.65 0.00 0.00 1.82
5390 5879 5.105351 GCAATAGGTAGAATGGCCAAAACTT 60.105 40.000 10.96 0.00 0.00 2.66
5459 5948 4.703575 ACTTGATACTCGTACAGGCTACAA 59.296 41.667 0.00 0.00 0.00 2.41
5985 6477 3.206150 GACAGCACAGGAAACAAGAAGA 58.794 45.455 0.00 0.00 0.00 2.87
6087 6579 4.287781 TTTCACCACCTCGCGCGA 62.288 61.111 32.60 32.60 0.00 5.87
6088 6580 3.777925 CTTTCACCACCTCGCGCG 61.778 66.667 26.76 26.76 0.00 6.86
6092 6584 0.613260 TCCATCCTTTCACCACCTCG 59.387 55.000 0.00 0.00 0.00 4.63
6100 6592 2.631384 TCCTCCACTTCCATCCTTTCA 58.369 47.619 0.00 0.00 0.00 2.69
6117 6609 1.504912 ACAGATGCACAGCCTATCCT 58.495 50.000 0.00 0.00 0.00 3.24
6134 6626 1.633432 CCCTTACCCTCATCACCAACA 59.367 52.381 0.00 0.00 0.00 3.33
6170 6671 1.449601 CCGCCTTGCTCCACGTAAT 60.450 57.895 0.00 0.00 0.00 1.89
6171 6672 2.047655 CCGCCTTGCTCCACGTAA 60.048 61.111 0.00 0.00 0.00 3.18
6237 6738 1.413077 AGGCTATTACCACGAGGAAGC 59.587 52.381 5.68 8.58 38.69 3.86
6308 6809 2.283173 GGCACCCAACCCAGGAAG 60.283 66.667 0.00 0.00 0.00 3.46
6345 6846 4.261447 GGGCACAAACGTTTTGACTATCTT 60.261 41.667 20.74 0.00 0.00 2.40
6352 6853 1.433879 CCGGGCACAAACGTTTTGA 59.566 52.632 11.66 0.00 0.00 2.69
6354 6855 2.105328 GCCGGGCACAAACGTTTT 59.895 55.556 15.62 0.20 0.00 2.43
6374 6875 1.337447 CGGCCGAAGTTTCTAACCAGA 60.337 52.381 24.07 0.00 0.00 3.86
6376 6877 0.320946 CCGGCCGAAGTTTCTAACCA 60.321 55.000 30.73 0.00 0.00 3.67
6381 6882 2.048503 CGACCGGCCGAAGTTTCT 60.049 61.111 30.73 0.00 0.00 2.52
6382 6883 3.785499 GCGACCGGCCGAAGTTTC 61.785 66.667 30.73 13.29 34.80 2.78
6383 6884 4.612412 TGCGACCGGCCGAAGTTT 62.612 61.111 30.73 4.57 42.61 2.66
6399 6900 2.951745 GATCGTCAGGCTCGCGTG 60.952 66.667 5.77 4.44 0.00 5.34
6400 6901 2.874010 CTTGATCGTCAGGCTCGCGT 62.874 60.000 5.77 0.00 0.00 6.01
6401 6902 2.202610 TTGATCGTCAGGCTCGCG 60.203 61.111 0.00 0.00 0.00 5.87
6402 6903 2.520904 GCTTGATCGTCAGGCTCGC 61.521 63.158 12.51 0.00 44.80 5.03
6403 6904 1.880340 GGCTTGATCGTCAGGCTCG 60.880 63.158 16.98 0.00 46.99 5.03
6404 6905 0.809241 CAGGCTTGATCGTCAGGCTC 60.809 60.000 16.98 10.23 46.99 4.70
6405 6906 1.220206 CAGGCTTGATCGTCAGGCT 59.780 57.895 16.98 9.02 46.99 4.58
6407 6908 0.803768 CGACAGGCTTGATCGTCAGG 60.804 60.000 1.40 0.00 0.00 3.86
6408 6909 0.109086 ACGACAGGCTTGATCGTCAG 60.109 55.000 16.49 3.35 45.50 3.51
6409 6910 1.135489 GTACGACAGGCTTGATCGTCA 60.135 52.381 22.42 11.50 45.50 4.35
6410 6911 1.135489 TGTACGACAGGCTTGATCGTC 60.135 52.381 22.42 16.42 45.50 4.20
6412 6913 2.120232 GATGTACGACAGGCTTGATCG 58.880 52.381 15.48 15.48 41.60 3.69
6413 6914 3.444703 AGATGTACGACAGGCTTGATC 57.555 47.619 1.40 0.00 0.00 2.92
6414 6915 3.954904 ACTAGATGTACGACAGGCTTGAT 59.045 43.478 1.40 0.00 0.00 2.57
6415 6916 3.353557 ACTAGATGTACGACAGGCTTGA 58.646 45.455 1.40 0.00 0.00 3.02
6416 6917 3.784701 ACTAGATGTACGACAGGCTTG 57.215 47.619 0.00 0.00 0.00 4.01
6417 6918 5.909621 TTAACTAGATGTACGACAGGCTT 57.090 39.130 0.00 0.00 0.00 4.35
6418 6919 5.909621 TTTAACTAGATGTACGACAGGCT 57.090 39.130 0.00 0.00 0.00 4.58
6419 6920 6.956299 TTTTTAACTAGATGTACGACAGGC 57.044 37.500 0.00 0.00 0.00 4.85
6440 6941 3.746045 TGTACGACAGCCTCTCTTTTT 57.254 42.857 0.00 0.00 0.00 1.94
6441 6942 3.511934 AGATGTACGACAGCCTCTCTTTT 59.488 43.478 0.00 0.00 34.53 2.27
6442 6943 3.093057 AGATGTACGACAGCCTCTCTTT 58.907 45.455 0.00 0.00 34.53 2.52
6443 6944 2.685897 GAGATGTACGACAGCCTCTCTT 59.314 50.000 0.00 0.00 34.53 2.85
6444 6945 2.294074 GAGATGTACGACAGCCTCTCT 58.706 52.381 0.00 0.00 34.53 3.10
6445 6946 2.017782 TGAGATGTACGACAGCCTCTC 58.982 52.381 14.66 11.89 34.53 3.20
6446 6947 1.746220 GTGAGATGTACGACAGCCTCT 59.254 52.381 14.66 5.93 34.53 3.69
6447 6948 1.202313 GGTGAGATGTACGACAGCCTC 60.202 57.143 0.00 1.87 34.53 4.70
6448 6949 0.818296 GGTGAGATGTACGACAGCCT 59.182 55.000 0.00 0.00 34.53 4.58
6449 6950 0.179108 GGGTGAGATGTACGACAGCC 60.179 60.000 11.56 11.56 34.53 4.85
6450 6951 0.179108 GGGGTGAGATGTACGACAGC 60.179 60.000 0.00 0.00 34.13 4.40
6451 6952 1.135139 CAGGGGTGAGATGTACGACAG 59.865 57.143 0.00 0.00 0.00 3.51
6452 6953 1.182667 CAGGGGTGAGATGTACGACA 58.817 55.000 0.00 0.00 0.00 4.35
6453 6954 0.179108 GCAGGGGTGAGATGTACGAC 60.179 60.000 0.00 0.00 0.00 4.34
6454 6955 0.613572 TGCAGGGGTGAGATGTACGA 60.614 55.000 0.00 0.00 0.00 3.43
6455 6956 0.460284 GTGCAGGGGTGAGATGTACG 60.460 60.000 0.00 0.00 0.00 3.67
6456 6957 0.107654 GGTGCAGGGGTGAGATGTAC 60.108 60.000 0.00 0.00 0.00 2.90
6457 6958 0.546507 TGGTGCAGGGGTGAGATGTA 60.547 55.000 0.00 0.00 0.00 2.29
6458 6959 1.210204 ATGGTGCAGGGGTGAGATGT 61.210 55.000 0.00 0.00 0.00 3.06
6459 6960 0.465097 GATGGTGCAGGGGTGAGATG 60.465 60.000 0.00 0.00 0.00 2.90
6460 6961 0.622738 AGATGGTGCAGGGGTGAGAT 60.623 55.000 0.00 0.00 0.00 2.75
6461 6962 1.229625 AGATGGTGCAGGGGTGAGA 60.230 57.895 0.00 0.00 0.00 3.27
6462 6963 1.077930 CAGATGGTGCAGGGGTGAG 60.078 63.158 0.00 0.00 0.00 3.51
6463 6964 1.841302 GACAGATGGTGCAGGGGTGA 61.841 60.000 0.00 0.00 0.00 4.02
6464 6965 1.377725 GACAGATGGTGCAGGGGTG 60.378 63.158 0.00 0.00 0.00 4.61
6465 6966 2.606587 GGACAGATGGTGCAGGGGT 61.607 63.158 0.00 0.00 37.84 4.95
6466 6967 2.273449 GGACAGATGGTGCAGGGG 59.727 66.667 0.00 0.00 37.84 4.79
6467 6968 3.080641 TGGACAGATGGTGCAGGG 58.919 61.111 0.00 0.00 43.49 4.45
6471 6972 5.220710 AGTATAAGATGGACAGATGGTGC 57.779 43.478 0.00 0.00 38.51 5.01
6472 6973 9.784531 AAATAAGTATAAGATGGACAGATGGTG 57.215 33.333 0.00 0.00 0.00 4.17
6498 6999 3.926821 AAAAGATAAGCGCCCGAAAAA 57.073 38.095 2.29 0.00 0.00 1.94
6499 7000 3.926821 AAAAAGATAAGCGCCCGAAAA 57.073 38.095 2.29 0.00 0.00 2.29
6516 7017 6.768381 GGAGGAAGAAGACAGAGAAAGAAAAA 59.232 38.462 0.00 0.00 0.00 1.94
6517 7018 6.292150 GGAGGAAGAAGACAGAGAAAGAAAA 58.708 40.000 0.00 0.00 0.00 2.29
6518 7019 5.859495 GGAGGAAGAAGACAGAGAAAGAAA 58.141 41.667 0.00 0.00 0.00 2.52
6519 7020 5.476091 GGAGGAAGAAGACAGAGAAAGAA 57.524 43.478 0.00 0.00 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.