Multiple sequence alignment - TraesCS1A01G182700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G182700 chr1A 100.000 7057 0 0 1 7057 330772381 330765325 0.000000e+00 13032.0
1 TraesCS1A01G182700 chr1A 96.465 198 5 2 6321 6518 398058678 398058483 6.830000e-85 326.0
2 TraesCS1A01G182700 chr1D 95.760 3797 106 21 2400 6151 257002989 256999203 0.000000e+00 6069.0
3 TraesCS1A01G182700 chr1D 93.813 1794 54 16 645 2403 257004846 257003075 0.000000e+00 2645.0
4 TraesCS1A01G182700 chr1D 92.990 485 26 4 180 657 257005349 257004866 0.000000e+00 701.0
5 TraesCS1A01G182700 chr1D 89.021 337 31 4 6723 7057 256998484 256998152 5.090000e-111 412.0
6 TraesCS1A01G182700 chr1D 95.361 194 9 0 1 194 257020421 257020228 6.880000e-80 309.0
7 TraesCS1A01G182700 chr1D 93.671 158 9 1 6173 6330 256998754 256998598 1.180000e-57 235.0
8 TraesCS1A01G182700 chr1D 88.298 94 9 2 5440 5533 249030403 249030312 2.080000e-20 111.0
9 TraesCS1A01G182700 chr1B 97.049 2643 63 10 3502 6136 356205742 356208377 0.000000e+00 4434.0
10 TraesCS1A01G182700 chr1B 92.021 1880 88 26 149 1998 356202485 356204332 0.000000e+00 2584.0
11 TraesCS1A01G182700 chr1B 95.408 980 27 8 2400 3376 356204781 356205745 0.000000e+00 1544.0
12 TraesCS1A01G182700 chr1B 91.892 407 19 7 1999 2401 356204296 356204692 2.220000e-154 556.0
13 TraesCS1A01G182700 chr1B 89.677 155 10 2 6173 6327 356209121 356209269 7.220000e-45 193.0
14 TraesCS1A01G182700 chr1B 92.473 93 6 1 3061 3152 597156890 597156798 1.600000e-26 132.0
15 TraesCS1A01G182700 chr1B 92.857 84 5 1 5445 5527 356207766 356207683 3.460000e-23 121.0
16 TraesCS1A01G182700 chr6D 94.444 234 10 2 1228 1461 245266809 245267039 2.420000e-94 357.0
17 TraesCS1A01G182700 chr6D 94.872 117 5 1 1124 1239 245267039 245267155 1.560000e-41 182.0
18 TraesCS1A01G182700 chr6D 91.765 85 5 2 5437 5520 84938454 84938537 4.470000e-22 117.0
19 TraesCS1A01G182700 chr2A 98.421 190 3 0 6330 6519 631865121 631864932 1.130000e-87 335.0
20 TraesCS1A01G182700 chr2A 98.925 186 2 0 6331 6516 38649769 38649954 4.080000e-87 333.0
21 TraesCS1A01G182700 chr2A 98.919 185 2 0 6331 6515 63805709 63805893 1.470000e-86 331.0
22 TraesCS1A01G182700 chr2A 98.919 185 2 0 6330 6514 196517964 196518148 1.470000e-86 331.0
23 TraesCS1A01G182700 chr2A 93.023 86 6 0 3063 3148 182008967 182009052 7.430000e-25 126.0
24 TraesCS1A01G182700 chr7A 99.451 182 1 0 6334 6515 130378374 130378193 1.470000e-86 331.0
25 TraesCS1A01G182700 chr6A 98.396 187 2 1 6334 6520 180309337 180309152 1.900000e-85 327.0
26 TraesCS1A01G182700 chr4A 97.895 190 3 1 6331 6519 47137894 47138083 1.900000e-85 327.0
27 TraesCS1A01G182700 chr3A 97.838 185 4 0 6334 6518 466246604 466246420 3.180000e-83 320.0
28 TraesCS1A01G182700 chr7B 88.182 110 10 3 5426 5534 559531921 559532028 2.070000e-25 128.0
29 TraesCS1A01G182700 chr7B 90.909 88 7 1 5439 5526 559532021 559531935 4.470000e-22 117.0
30 TraesCS1A01G182700 chr2D 91.860 86 7 0 3063 3148 168426074 168425989 3.460000e-23 121.0
31 TraesCS1A01G182700 chr2D 88.000 100 10 2 5437 5536 500366521 500366618 4.470000e-22 117.0
32 TraesCS1A01G182700 chr2D 89.535 86 8 1 3062 3146 74975995 74975910 2.690000e-19 108.0
33 TraesCS1A01G182700 chr3D 87.037 108 10 4 5437 5542 181108122 181108017 1.240000e-22 119.0
34 TraesCS1A01G182700 chr3D 84.615 78 10 2 6917 6993 466818566 466818642 7.590000e-10 76.8
35 TraesCS1A01G182700 chr4B 87.255 102 9 4 3054 3153 612214256 612214157 5.790000e-21 113.0
36 TraesCS1A01G182700 chr2B 90.588 85 7 1 3063 3146 247368538 247368622 2.080000e-20 111.0
37 TraesCS1A01G182700 chr2B 92.405 79 5 1 3062 3139 633391598 633391676 2.080000e-20 111.0
38 TraesCS1A01G182700 chr3B 85.000 100 12 3 3051 3147 108816168 108816069 1.620000e-16 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G182700 chr1A 330765325 330772381 7056 True 13032.0 13032 100.0000 1 7057 1 chr1A.!!$R1 7056
1 TraesCS1A01G182700 chr1D 256998152 257005349 7197 True 2012.4 6069 93.0510 180 7057 5 chr1D.!!$R3 6877
2 TraesCS1A01G182700 chr1B 356202485 356209269 6784 False 1862.2 4434 93.2094 149 6327 5 chr1B.!!$F1 6178

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
302 303 0.319297 ACTGTTTACTCGCGTCACCC 60.319 55.000 5.77 0.00 0.00 4.61 F
891 939 1.131504 CGTGAAGGAAGAGGAGACGAG 59.868 57.143 0.00 0.00 0.00 4.18 F
1996 2106 0.928229 CGAGTATGCGGGTTACTTGC 59.072 55.000 0.00 0.00 30.15 4.01 F
2135 2246 0.396811 ACAGTTACAGACCTGTGGCC 59.603 55.000 12.54 0.00 44.63 5.36 F
3932 4147 0.041684 TCAGATCTGGGGTGAGAGCA 59.958 55.000 22.42 0.00 30.38 4.26 F
4062 4279 0.987613 TGGTGCTCAGATATGGGCCA 60.988 55.000 9.61 9.61 0.00 5.36 F
5421 5652 1.043022 CCTTATGCTGCATTTCCCCC 58.957 55.000 21.56 0.00 0.00 5.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1593 1642 0.440371 GAAGCTTGTACTCACGCTGC 59.560 55.000 2.10 0.00 46.03 5.25 R
2022 2132 0.476023 TACCCCCTGCAAGTAACCCA 60.476 55.000 0.00 0.00 0.00 4.51 R
3136 3343 0.315568 CGCAGCCATCTACTACCTCC 59.684 60.000 0.00 0.00 0.00 4.30 R
3960 4175 1.107114 GAGAAGGAGATGAGCGGTCA 58.893 55.000 21.02 21.02 37.02 4.02 R
5145 5374 1.073722 CCTGGCTTGTGCTTCCTCA 59.926 57.895 0.00 0.00 39.59 3.86 R
5500 5750 2.288666 TCTCCGTTCCATAATGCTTGC 58.711 47.619 0.00 0.00 0.00 4.01 R
6885 7895 0.103208 GATGAGTTCGGTCGAGCCAT 59.897 55.000 9.39 6.02 36.97 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 8.933522 ATATATGGGGACTATGGTGAAATAGT 57.066 34.615 0.00 0.00 44.30 2.12
27 28 5.994416 ATGGGGACTATGGTGAAATAGTT 57.006 39.130 0.00 0.00 42.22 2.24
28 29 8.751215 ATATGGGGACTATGGTGAAATAGTTA 57.249 34.615 0.00 0.00 42.22 2.24
29 30 6.243216 TGGGGACTATGGTGAAATAGTTAC 57.757 41.667 0.00 0.00 42.22 2.50
30 31 5.727279 TGGGGACTATGGTGAAATAGTTACA 59.273 40.000 0.00 0.00 42.22 2.41
31 32 6.388689 TGGGGACTATGGTGAAATAGTTACAT 59.611 38.462 0.00 0.00 42.22 2.29
32 33 6.710744 GGGGACTATGGTGAAATAGTTACATG 59.289 42.308 0.00 0.00 42.22 3.21
33 34 7.280356 GGGACTATGGTGAAATAGTTACATGT 58.720 38.462 2.69 2.69 42.22 3.21
34 35 8.426489 GGGACTATGGTGAAATAGTTACATGTA 58.574 37.037 0.08 0.08 42.22 2.29
35 36 9.477484 GGACTATGGTGAAATAGTTACATGTAG 57.523 37.037 5.56 0.00 42.22 2.74
37 38 9.817809 ACTATGGTGAAATAGTTACATGTAGTG 57.182 33.333 5.56 0.00 39.80 2.74
38 39 6.978343 TGGTGAAATAGTTACATGTAGTGC 57.022 37.500 5.56 1.30 0.00 4.40
39 40 6.468543 TGGTGAAATAGTTACATGTAGTGCA 58.531 36.000 5.56 0.00 0.00 4.57
40 41 6.370442 TGGTGAAATAGTTACATGTAGTGCAC 59.630 38.462 9.40 9.40 0.00 4.57
41 42 6.455113 GGTGAAATAGTTACATGTAGTGCACG 60.455 42.308 12.01 0.00 0.00 5.34
42 43 5.062934 TGAAATAGTTACATGTAGTGCACGC 59.937 40.000 12.01 9.34 0.00 5.34
43 44 2.743636 AGTTACATGTAGTGCACGCT 57.256 45.000 12.01 0.00 0.00 5.07
44 45 3.040147 AGTTACATGTAGTGCACGCTT 57.960 42.857 12.01 4.20 0.00 4.68
45 46 2.736721 AGTTACATGTAGTGCACGCTTG 59.263 45.455 12.01 17.45 0.00 4.01
66 67 6.500589 TTGCAGATAAGCTAGGTATTCCTT 57.499 37.500 0.00 0.00 44.58 3.36
67 68 6.102897 TGCAGATAAGCTAGGTATTCCTTC 57.897 41.667 0.00 0.00 44.58 3.46
68 69 5.841237 TGCAGATAAGCTAGGTATTCCTTCT 59.159 40.000 0.00 0.00 44.58 2.85
69 70 6.327626 TGCAGATAAGCTAGGTATTCCTTCTT 59.672 38.462 0.00 3.83 44.58 2.52
70 71 6.648725 GCAGATAAGCTAGGTATTCCTTCTTG 59.351 42.308 12.67 2.62 42.12 3.02
71 72 7.688083 GCAGATAAGCTAGGTATTCCTTCTTGT 60.688 40.741 12.67 8.19 42.12 3.16
72 73 8.207545 CAGATAAGCTAGGTATTCCTTCTTGTT 58.792 37.037 12.67 4.25 42.12 2.83
73 74 8.207545 AGATAAGCTAGGTATTCCTTCTTGTTG 58.792 37.037 12.67 0.00 42.12 3.33
74 75 5.763876 AGCTAGGTATTCCTTCTTGTTGT 57.236 39.130 0.00 0.00 42.12 3.32
75 76 6.869206 AGCTAGGTATTCCTTCTTGTTGTA 57.131 37.500 0.00 0.00 42.12 2.41
76 77 7.439108 AGCTAGGTATTCCTTCTTGTTGTAT 57.561 36.000 0.00 0.00 42.12 2.29
77 78 7.275920 AGCTAGGTATTCCTTCTTGTTGTATG 58.724 38.462 0.00 0.00 42.12 2.39
78 79 6.017852 GCTAGGTATTCCTTCTTGTTGTATGC 60.018 42.308 0.00 0.00 42.12 3.14
79 80 5.815581 AGGTATTCCTTCTTGTTGTATGCA 58.184 37.500 0.00 0.00 42.12 3.96
80 81 6.426587 AGGTATTCCTTCTTGTTGTATGCAT 58.573 36.000 3.79 3.79 42.12 3.96
81 82 6.319658 AGGTATTCCTTCTTGTTGTATGCATG 59.680 38.462 10.16 0.00 42.12 4.06
82 83 6.095440 GGTATTCCTTCTTGTTGTATGCATGT 59.905 38.462 10.16 0.00 0.00 3.21
83 84 7.282224 GGTATTCCTTCTTGTTGTATGCATGTA 59.718 37.037 10.16 0.00 0.00 2.29
84 85 7.886629 ATTCCTTCTTGTTGTATGCATGTAT 57.113 32.000 10.16 0.82 0.00 2.29
85 86 6.925610 TCCTTCTTGTTGTATGCATGTATC 57.074 37.500 10.16 0.00 0.00 2.24
86 87 5.822519 TCCTTCTTGTTGTATGCATGTATCC 59.177 40.000 10.16 0.00 0.00 2.59
87 88 5.589855 CCTTCTTGTTGTATGCATGTATCCA 59.410 40.000 10.16 0.00 0.00 3.41
88 89 6.263842 CCTTCTTGTTGTATGCATGTATCCAT 59.736 38.462 10.16 0.00 0.00 3.41
89 90 7.445096 CCTTCTTGTTGTATGCATGTATCCATA 59.555 37.037 10.16 0.00 0.00 2.74
90 91 7.967890 TCTTGTTGTATGCATGTATCCATAG 57.032 36.000 10.16 0.00 0.00 2.23
91 92 6.427853 TCTTGTTGTATGCATGTATCCATAGC 59.572 38.462 10.16 0.00 0.00 2.97
92 93 4.690280 TGTTGTATGCATGTATCCATAGCG 59.310 41.667 10.16 0.00 31.71 4.26
93 94 4.535526 TGTATGCATGTATCCATAGCGT 57.464 40.909 10.16 0.00 32.68 5.07
94 95 4.244862 TGTATGCATGTATCCATAGCGTG 58.755 43.478 10.16 0.00 31.39 5.34
95 96 2.908688 TGCATGTATCCATAGCGTGT 57.091 45.000 0.00 0.00 31.71 4.49
96 97 4.535526 ATGCATGTATCCATAGCGTGTA 57.464 40.909 0.00 0.00 31.71 2.90
97 98 3.913089 TGCATGTATCCATAGCGTGTAG 58.087 45.455 0.00 0.00 31.71 2.74
110 111 2.876091 GCGTGTAGCTATGACTGTTGA 58.124 47.619 0.00 0.00 44.04 3.18
111 112 2.599082 GCGTGTAGCTATGACTGTTGAC 59.401 50.000 0.00 0.00 44.04 3.18
112 113 3.179830 CGTGTAGCTATGACTGTTGACC 58.820 50.000 0.00 0.00 0.00 4.02
113 114 3.179830 GTGTAGCTATGACTGTTGACCG 58.820 50.000 0.00 0.00 0.00 4.79
114 115 2.823747 TGTAGCTATGACTGTTGACCGT 59.176 45.455 0.00 0.00 0.00 4.83
115 116 2.656560 AGCTATGACTGTTGACCGTC 57.343 50.000 0.00 0.00 0.00 4.79
116 117 2.171840 AGCTATGACTGTTGACCGTCT 58.828 47.619 0.00 0.00 0.00 4.18
117 118 2.563179 AGCTATGACTGTTGACCGTCTT 59.437 45.455 0.00 4.02 0.00 3.01
118 119 3.762288 AGCTATGACTGTTGACCGTCTTA 59.238 43.478 0.00 4.82 0.00 2.10
119 120 4.402793 AGCTATGACTGTTGACCGTCTTAT 59.597 41.667 0.00 0.00 0.00 1.73
120 121 5.105310 AGCTATGACTGTTGACCGTCTTATT 60.105 40.000 0.00 0.00 0.00 1.40
121 122 6.096423 AGCTATGACTGTTGACCGTCTTATTA 59.904 38.462 0.00 0.00 0.00 0.98
122 123 6.418226 GCTATGACTGTTGACCGTCTTATTAG 59.582 42.308 0.00 5.04 0.00 1.73
123 124 5.970317 TGACTGTTGACCGTCTTATTAGA 57.030 39.130 0.00 0.00 0.00 2.10
124 125 5.706916 TGACTGTTGACCGTCTTATTAGAC 58.293 41.667 1.66 1.66 46.01 2.59
125 126 5.069501 ACTGTTGACCGTCTTATTAGACC 57.930 43.478 6.30 0.00 46.63 3.85
126 127 4.100707 TGTTGACCGTCTTATTAGACCG 57.899 45.455 6.30 2.81 46.63 4.79
127 128 3.758023 TGTTGACCGTCTTATTAGACCGA 59.242 43.478 6.30 0.00 46.63 4.69
128 129 4.400251 TGTTGACCGTCTTATTAGACCGAT 59.600 41.667 6.30 0.00 46.63 4.18
129 130 5.105635 TGTTGACCGTCTTATTAGACCGATT 60.106 40.000 6.30 0.00 46.63 3.34
130 131 5.587388 TGACCGTCTTATTAGACCGATTT 57.413 39.130 6.30 0.00 46.63 2.17
131 132 5.345702 TGACCGTCTTATTAGACCGATTTG 58.654 41.667 6.30 0.00 46.63 2.32
132 133 5.105635 TGACCGTCTTATTAGACCGATTTGT 60.106 40.000 6.30 0.00 46.63 2.83
133 134 5.107133 ACCGTCTTATTAGACCGATTTGTG 58.893 41.667 6.30 0.00 46.63 3.33
134 135 5.107133 CCGTCTTATTAGACCGATTTGTGT 58.893 41.667 6.30 0.00 46.63 3.72
135 136 5.005394 CCGTCTTATTAGACCGATTTGTGTG 59.995 44.000 6.30 0.00 46.63 3.82
136 137 5.575606 CGTCTTATTAGACCGATTTGTGTGT 59.424 40.000 6.30 0.00 46.63 3.72
137 138 6.090358 CGTCTTATTAGACCGATTTGTGTGTT 59.910 38.462 6.30 0.00 46.63 3.32
138 139 7.359765 CGTCTTATTAGACCGATTTGTGTGTTT 60.360 37.037 6.30 0.00 46.63 2.83
139 140 7.744715 GTCTTATTAGACCGATTTGTGTGTTTG 59.255 37.037 0.17 0.00 44.15 2.93
140 141 2.774439 AGACCGATTTGTGTGTTTGC 57.226 45.000 0.00 0.00 0.00 3.68
141 142 1.002900 AGACCGATTTGTGTGTTTGCG 60.003 47.619 0.00 0.00 0.00 4.85
142 143 0.593773 ACCGATTTGTGTGTTTGCGC 60.594 50.000 0.00 0.00 0.00 6.09
143 144 0.593518 CCGATTTGTGTGTTTGCGCA 60.594 50.000 5.66 5.66 0.00 6.09
144 145 1.407434 CGATTTGTGTGTTTGCGCAT 58.593 45.000 12.75 0.00 37.46 4.73
145 146 1.383080 CGATTTGTGTGTTTGCGCATC 59.617 47.619 12.75 8.68 37.46 3.91
146 147 2.664916 GATTTGTGTGTTTGCGCATCT 58.335 42.857 12.75 0.00 37.46 2.90
147 148 3.666638 CGATTTGTGTGTTTGCGCATCTA 60.667 43.478 12.75 0.00 37.46 1.98
156 157 5.149273 GTGTTTGCGCATCTATGATATTGG 58.851 41.667 12.75 0.00 0.00 3.16
160 161 5.088680 TGCGCATCTATGATATTGGATGA 57.911 39.130 5.66 0.00 38.14 2.92
163 164 5.756833 GCGCATCTATGATATTGGATGATCA 59.243 40.000 0.30 0.00 38.14 2.92
185 186 3.945346 TGTGATGTGTTATAGCCGGTTT 58.055 40.909 1.90 0.00 0.00 3.27
284 285 2.870411 GGCCGTACCATGAGAACATAAC 59.130 50.000 0.00 0.00 38.86 1.89
302 303 0.319297 ACTGTTTACTCGCGTCACCC 60.319 55.000 5.77 0.00 0.00 4.61
325 326 4.281182 CCCCATAGCTAAGTACGAATCTGT 59.719 45.833 0.00 0.00 0.00 3.41
391 392 2.095059 ACAATGTGCTCTGATTTTCGCC 60.095 45.455 0.00 0.00 0.00 5.54
488 489 9.702494 TGAACTATCACTAGATATTCAAGCATG 57.298 33.333 0.00 0.00 36.21 4.06
491 492 5.200368 TCACTAGATATTCAAGCATGCGA 57.800 39.130 13.01 0.89 0.00 5.10
497 498 5.953183 AGATATTCAAGCATGCGAAACAAA 58.047 33.333 13.01 2.89 0.00 2.83
508 509 8.153479 AGCATGCGAAACAAATATAGAATGTA 57.847 30.769 13.01 0.00 0.00 2.29
668 708 4.745649 AGTAACAGTAGAATCAACGGAGC 58.254 43.478 0.00 0.00 0.00 4.70
890 938 1.166129 CGTGAAGGAAGAGGAGACGA 58.834 55.000 0.00 0.00 0.00 4.20
891 939 1.131504 CGTGAAGGAAGAGGAGACGAG 59.868 57.143 0.00 0.00 0.00 4.18
892 940 2.438411 GTGAAGGAAGAGGAGACGAGA 58.562 52.381 0.00 0.00 0.00 4.04
893 941 2.162809 GTGAAGGAAGAGGAGACGAGAC 59.837 54.545 0.00 0.00 0.00 3.36
894 942 1.399089 GAAGGAAGAGGAGACGAGACG 59.601 57.143 0.00 0.00 0.00 4.18
933 981 1.445066 CTCTTTGCTCGCTCTCGCA 60.445 57.895 0.00 0.00 35.30 5.10
1575 1624 1.702182 TTGTTGCTGAGGGATTTGCA 58.298 45.000 0.00 0.00 0.00 4.08
1957 2030 4.213482 GTGTGGGGATCGATATAACTTTGC 59.787 45.833 0.00 0.00 0.00 3.68
1977 2087 8.787852 ACTTTGCATTATTAGATAAGCTTAGCC 58.212 33.333 17.80 9.05 0.00 3.93
1978 2088 6.968131 TGCATTATTAGATAAGCTTAGCCG 57.032 37.500 17.80 0.38 0.00 5.52
1979 2089 6.697395 TGCATTATTAGATAAGCTTAGCCGA 58.303 36.000 17.80 7.54 0.00 5.54
1980 2090 6.813649 TGCATTATTAGATAAGCTTAGCCGAG 59.186 38.462 17.80 3.38 0.00 4.63
1981 2091 6.814146 GCATTATTAGATAAGCTTAGCCGAGT 59.186 38.462 17.80 6.34 0.00 4.18
1982 2092 7.974501 GCATTATTAGATAAGCTTAGCCGAGTA 59.025 37.037 17.80 5.42 0.00 2.59
1985 2095 4.181309 AGATAAGCTTAGCCGAGTATGC 57.819 45.455 17.80 0.00 0.00 3.14
1986 2096 2.417339 TAAGCTTAGCCGAGTATGCG 57.583 50.000 0.86 0.00 0.00 4.73
1996 2106 0.928229 CGAGTATGCGGGTTACTTGC 59.072 55.000 0.00 0.00 30.15 4.01
1997 2107 1.737696 CGAGTATGCGGGTTACTTGCA 60.738 52.381 4.78 4.78 43.67 4.08
1998 2108 2.352388 GAGTATGCGGGTTACTTGCAA 58.648 47.619 0.00 0.00 42.65 4.08
1999 2109 2.943033 GAGTATGCGGGTTACTTGCAAT 59.057 45.455 0.00 0.00 42.65 3.56
2000 2110 3.352648 AGTATGCGGGTTACTTGCAATT 58.647 40.909 0.00 0.00 42.65 2.32
2001 2111 4.519213 AGTATGCGGGTTACTTGCAATTA 58.481 39.130 0.00 0.00 42.65 1.40
2002 2112 4.574828 AGTATGCGGGTTACTTGCAATTAG 59.425 41.667 0.00 0.00 42.65 1.73
2003 2113 3.060736 TGCGGGTTACTTGCAATTAGA 57.939 42.857 0.00 0.00 35.33 2.10
2004 2114 3.616219 TGCGGGTTACTTGCAATTAGAT 58.384 40.909 0.00 0.00 35.33 1.98
2005 2115 4.771903 TGCGGGTTACTTGCAATTAGATA 58.228 39.130 0.00 0.00 35.33 1.98
2022 2132 9.703892 CAATTAGATAAGCTTAGCTGAGTATGT 57.296 33.333 29.75 7.51 39.62 2.29
2039 2149 1.304134 GTGGGTTACTTGCAGGGGG 60.304 63.158 0.00 0.00 0.00 5.40
2053 2164 2.508300 GCAGGGGGTATGTAAAAGGAGA 59.492 50.000 0.00 0.00 0.00 3.71
2072 2183 7.497925 AGGAGATTGCGATTCTTTAATTACC 57.502 36.000 0.00 0.00 0.00 2.85
2079 2190 8.459521 TTGCGATTCTTTAATTACCATGTTTG 57.540 30.769 0.00 0.00 0.00 2.93
2105 2216 7.862512 TTCATTATGATGTGTTCATGCAGTA 57.137 32.000 0.00 0.00 44.90 2.74
2117 2228 5.179368 TGTTCATGCAGTAGCTTAGAACAAC 59.821 40.000 15.08 0.00 39.65 3.32
2127 2238 7.115095 CAGTAGCTTAGAACAACAGTTACAGAC 59.885 40.741 0.00 0.00 29.24 3.51
2135 2246 0.396811 ACAGTTACAGACCTGTGGCC 59.603 55.000 12.54 0.00 44.63 5.36
2136 2247 0.687354 CAGTTACAGACCTGTGGCCT 59.313 55.000 12.54 3.24 44.63 5.19
2197 2308 7.918562 GCTGATAGACTAATAGCTGGTTATAGC 59.081 40.741 11.89 0.00 44.01 2.97
2269 2380 3.005791 TGTCCTGGAGATGTATATGTGCG 59.994 47.826 0.00 0.00 0.00 5.34
2323 2437 6.763610 TGTTTGTGATGTATGTGTGAACACTA 59.236 34.615 14.28 2.29 46.55 2.74
2324 2438 7.443879 TGTTTGTGATGTATGTGTGAACACTAT 59.556 33.333 14.28 8.81 46.55 2.12
2325 2439 6.966435 TGTGATGTATGTGTGAACACTATG 57.034 37.500 14.28 0.00 46.55 2.23
2350 2464 8.816144 TGATGAAGTAATCAAAAACAAAAGTGC 58.184 29.630 0.00 0.00 42.54 4.40
2351 2465 8.715191 ATGAAGTAATCAAAAACAAAAGTGCA 57.285 26.923 0.00 0.00 42.54 4.57
2352 2466 8.715191 TGAAGTAATCAAAAACAAAAGTGCAT 57.285 26.923 0.00 0.00 34.30 3.96
2353 2467 8.602328 TGAAGTAATCAAAAACAAAAGTGCATG 58.398 29.630 0.00 0.00 34.30 4.06
2354 2468 8.715191 AAGTAATCAAAAACAAAAGTGCATGA 57.285 26.923 0.00 0.00 0.00 3.07
2355 2469 8.891671 AGTAATCAAAAACAAAAGTGCATGAT 57.108 26.923 0.00 0.00 0.00 2.45
2356 2470 9.979578 AGTAATCAAAAACAAAAGTGCATGATA 57.020 25.926 0.00 0.00 0.00 2.15
2417 2621 8.969121 TGTCTAATTGTTTTACTGCAATGATG 57.031 30.769 0.00 0.00 35.72 3.07
2476 2680 8.792830 TCTTATACTCAGTTTTCAATTCCAGG 57.207 34.615 0.00 0.00 0.00 4.45
2548 2752 8.859090 CCTGAATATCTTGAGATCTTGTAGTCT 58.141 37.037 0.00 0.00 36.05 3.24
2570 2774 3.685836 ACAACGAACAACTAAACCTGC 57.314 42.857 0.00 0.00 0.00 4.85
2698 2902 6.538444 GCTACTCTAATGAACTTGAGCAAAC 58.462 40.000 0.00 0.00 0.00 2.93
2946 3152 3.588842 TCCAGGATCTCACCTCATTTTGT 59.411 43.478 0.00 0.00 38.32 2.83
2972 3178 0.518636 ACATCATGACTTGCGCACAC 59.481 50.000 11.12 5.00 0.00 3.82
3072 3278 4.033009 TGCATTCTCTTCTACTCCATCCA 58.967 43.478 0.00 0.00 0.00 3.41
3089 3295 8.723365 ACTCCATCCATACCAAAATATAAGACA 58.277 33.333 0.00 0.00 0.00 3.41
3136 3343 7.534578 TGCAAAAACGTCTTATATTTTGGTACG 59.465 33.333 17.78 0.00 41.02 3.67
3430 3640 5.439721 TGTATGATTCCAGCTAAGTTGCAT 58.560 37.500 0.00 0.00 34.99 3.96
3460 3670 6.537301 ACAACAATACAGATACCACAATACCG 59.463 38.462 0.00 0.00 0.00 4.02
3469 3679 5.542635 AGATACCACAATACCGTGATATGGT 59.457 40.000 0.00 0.00 41.23 3.55
3563 3777 1.675552 AAACGATAATTCAGGGGCGG 58.324 50.000 0.00 0.00 0.00 6.13
3648 3862 1.799933 TGGCAAGAAAACCCCATTGT 58.200 45.000 0.00 0.00 0.00 2.71
3932 4147 0.041684 TCAGATCTGGGGTGAGAGCA 59.958 55.000 22.42 0.00 30.38 4.26
4062 4279 0.987613 TGGTGCTCAGATATGGGCCA 60.988 55.000 9.61 9.61 0.00 5.36
4101 4318 2.094182 GCGCATCGAGGGGAGAATAATA 60.094 50.000 18.88 0.00 0.00 0.98
4152 4370 7.656542 GCTTTTGTACTAGAGTGTTAGGTTTCT 59.343 37.037 0.00 0.00 0.00 2.52
4288 4506 2.756760 CCTGGTATGCTGATTTTGTGCT 59.243 45.455 0.00 0.00 0.00 4.40
4374 4594 4.155826 GCCTGCTTTTGTACATCATGTGTA 59.844 41.667 0.00 0.00 42.29 2.90
4409 4629 7.002250 TGGATCCTGAGATTGTTGATAGATC 57.998 40.000 14.23 0.00 30.90 2.75
4769 4994 3.866066 GCACTTGAAGCTGATCAGGTACA 60.866 47.826 26.71 13.00 37.52 2.90
4798 5025 8.686739 AGCTATATATGACTTATGGGTCCTTT 57.313 34.615 0.00 0.00 35.54 3.11
5070 5299 1.746861 CGCAATTATGACCAGGCCAGA 60.747 52.381 5.01 0.00 0.00 3.86
5117 5346 1.343069 AGACTTGAAAGAGAGGCCGT 58.657 50.000 0.00 0.00 0.00 5.68
5145 5374 4.217550 GCTGAGAGGAAGCGTATAGAAGAT 59.782 45.833 0.00 0.00 0.00 2.40
5281 5510 5.689819 ACGTTACTCGAGTATGTTTAACGT 58.310 37.500 32.78 32.78 42.86 3.99
5342 5573 7.124573 TCTAGTATAACATGTGCAGAACCAT 57.875 36.000 0.00 0.00 0.00 3.55
5417 5648 5.817816 AGTGTAGTACCTTATGCTGCATTTC 59.182 40.000 21.56 0.44 37.90 2.17
5418 5649 5.007724 GTGTAGTACCTTATGCTGCATTTCC 59.992 44.000 21.56 3.70 37.90 3.13
5420 5651 1.780503 ACCTTATGCTGCATTTCCCC 58.219 50.000 21.56 0.00 0.00 4.81
5421 5652 1.043022 CCTTATGCTGCATTTCCCCC 58.957 55.000 21.56 0.00 0.00 5.40
5520 5770 2.288666 GCAAGCATTATGGAACGGAGA 58.711 47.619 0.00 0.00 0.00 3.71
5555 5805 2.089925 AGGGGCTAGATAGGGACACATT 60.090 50.000 0.00 0.00 0.00 2.71
5647 5897 9.979578 TCACTTGATAGTAGTAGTAGTAGTAGC 57.020 37.037 7.81 7.81 31.96 3.58
5773 6029 0.696501 AGTTCCGCCACCATTACCTT 59.303 50.000 0.00 0.00 0.00 3.50
5785 6041 6.942576 GCCACCATTACCTTGATATATGACTT 59.057 38.462 0.00 0.00 0.00 3.01
6185 7194 1.876799 TGTGGTTAATTCGGTGCACTG 59.123 47.619 20.12 20.12 0.00 3.66
6237 7246 4.266976 TCTTTACGCTAGCGCAAGAAATAC 59.733 41.667 33.72 0.00 44.19 1.89
6273 7282 9.248291 TGAAAATTAAAGACACTCAAAAGATGC 57.752 29.630 0.00 0.00 0.00 3.91
6292 7301 3.765505 GCGTACAGCCGTATATGTTTC 57.234 47.619 0.00 0.00 40.81 2.78
6330 7339 9.965824 AAGAAAGTTGTATATGTTTTTGACCTG 57.034 29.630 0.00 0.00 0.00 4.00
6331 7340 8.576442 AGAAAGTTGTATATGTTTTTGACCTGG 58.424 33.333 0.00 0.00 0.00 4.45
6332 7341 8.472007 AAAGTTGTATATGTTTTTGACCTGGA 57.528 30.769 0.00 0.00 0.00 3.86
6333 7342 8.650143 AAGTTGTATATGTTTTTGACCTGGAT 57.350 30.769 0.00 0.00 0.00 3.41
6334 7343 8.055279 AGTTGTATATGTTTTTGACCTGGATG 57.945 34.615 0.00 0.00 0.00 3.51
6335 7344 7.669722 AGTTGTATATGTTTTTGACCTGGATGT 59.330 33.333 0.00 0.00 0.00 3.06
6336 7345 7.389803 TGTATATGTTTTTGACCTGGATGTG 57.610 36.000 0.00 0.00 0.00 3.21
6337 7346 6.945435 TGTATATGTTTTTGACCTGGATGTGT 59.055 34.615 0.00 0.00 0.00 3.72
6338 7347 4.853924 ATGTTTTTGACCTGGATGTGTC 57.146 40.909 0.00 0.00 0.00 3.67
6339 7348 3.897239 TGTTTTTGACCTGGATGTGTCT 58.103 40.909 0.00 0.00 32.67 3.41
6340 7349 5.042463 TGTTTTTGACCTGGATGTGTCTA 57.958 39.130 0.00 0.00 32.67 2.59
6341 7350 5.063204 TGTTTTTGACCTGGATGTGTCTAG 58.937 41.667 0.00 0.00 33.10 2.43
6345 7354 2.607811 CCTGGATGTGTCTAGGGCA 58.392 57.895 0.32 0.00 46.39 5.36
6346 7355 0.179000 CCTGGATGTGTCTAGGGCAC 59.821 60.000 10.20 10.20 46.39 5.01
6347 7356 2.516978 CCTGGATGTGTCTAGGGCACA 61.517 57.143 18.48 18.48 46.39 4.57
6353 7362 3.382083 TGTGTCTAGGGCACATCTAGA 57.618 47.619 14.22 0.00 41.32 2.43
6354 7363 3.916035 TGTGTCTAGGGCACATCTAGAT 58.084 45.455 14.22 0.00 43.25 1.98
6355 7364 3.638627 TGTGTCTAGGGCACATCTAGATG 59.361 47.826 27.63 27.63 43.25 2.90
6380 7389 6.878317 TGCTCTAGTTATTGCACATCTAAGT 58.122 36.000 0.00 0.00 0.00 2.24
6381 7390 6.758416 TGCTCTAGTTATTGCACATCTAAGTG 59.242 38.462 0.00 0.00 42.37 3.16
6382 7391 6.980978 GCTCTAGTTATTGCACATCTAAGTGA 59.019 38.462 0.00 0.00 42.05 3.41
6383 7392 7.168972 GCTCTAGTTATTGCACATCTAAGTGAG 59.831 40.741 0.00 0.00 42.05 3.51
6384 7393 8.067751 TCTAGTTATTGCACATCTAAGTGAGT 57.932 34.615 0.00 0.00 42.05 3.41
6385 7394 6.974932 AGTTATTGCACATCTAAGTGAGTG 57.025 37.500 0.00 0.00 42.05 3.51
6386 7395 6.701340 AGTTATTGCACATCTAAGTGAGTGA 58.299 36.000 0.00 0.00 42.05 3.41
6387 7396 7.161404 AGTTATTGCACATCTAAGTGAGTGAA 58.839 34.615 0.00 0.00 42.05 3.18
6388 7397 7.826252 AGTTATTGCACATCTAAGTGAGTGAAT 59.174 33.333 0.00 0.00 42.05 2.57
6389 7398 6.674694 ATTGCACATCTAAGTGAGTGAATC 57.325 37.500 0.00 0.00 42.05 2.52
6390 7399 5.151297 TGCACATCTAAGTGAGTGAATCA 57.849 39.130 0.00 0.00 42.05 2.57
6391 7400 5.550290 TGCACATCTAAGTGAGTGAATCAA 58.450 37.500 0.00 0.00 42.05 2.57
6392 7401 5.640783 TGCACATCTAAGTGAGTGAATCAAG 59.359 40.000 0.00 0.00 42.05 3.02
6393 7402 5.447010 GCACATCTAAGTGAGTGAATCAAGC 60.447 44.000 0.00 0.00 42.05 4.01
6394 7403 5.640783 CACATCTAAGTGAGTGAATCAAGCA 59.359 40.000 0.00 0.00 42.05 3.91
6395 7404 6.315642 CACATCTAAGTGAGTGAATCAAGCAT 59.684 38.462 0.00 0.00 42.05 3.79
6396 7405 7.493645 CACATCTAAGTGAGTGAATCAAGCATA 59.506 37.037 0.00 0.00 42.05 3.14
6397 7406 8.043113 ACATCTAAGTGAGTGAATCAAGCATAA 58.957 33.333 0.00 0.00 40.43 1.90
6398 7407 8.886719 CATCTAAGTGAGTGAATCAAGCATAAA 58.113 33.333 0.00 0.00 40.43 1.40
6399 7408 8.484641 TCTAAGTGAGTGAATCAAGCATAAAG 57.515 34.615 0.00 0.00 40.43 1.85
6400 7409 8.314021 TCTAAGTGAGTGAATCAAGCATAAAGA 58.686 33.333 0.00 0.00 40.43 2.52
6401 7410 6.981762 AGTGAGTGAATCAAGCATAAAGAG 57.018 37.500 0.00 0.00 40.43 2.85
6402 7411 6.705302 AGTGAGTGAATCAAGCATAAAGAGA 58.295 36.000 0.00 0.00 40.43 3.10
6403 7412 7.164122 AGTGAGTGAATCAAGCATAAAGAGAA 58.836 34.615 0.00 0.00 40.43 2.87
6404 7413 7.663081 AGTGAGTGAATCAAGCATAAAGAGAAA 59.337 33.333 0.00 0.00 40.43 2.52
6405 7414 8.292448 GTGAGTGAATCAAGCATAAAGAGAAAA 58.708 33.333 0.00 0.00 40.43 2.29
6406 7415 8.849168 TGAGTGAATCAAGCATAAAGAGAAAAA 58.151 29.630 0.00 0.00 34.02 1.94
6407 7416 9.339492 GAGTGAATCAAGCATAAAGAGAAAAAG 57.661 33.333 0.00 0.00 0.00 2.27
6408 7417 9.071276 AGTGAATCAAGCATAAAGAGAAAAAGA 57.929 29.630 0.00 0.00 0.00 2.52
6409 7418 9.683069 GTGAATCAAGCATAAAGAGAAAAAGAA 57.317 29.630 0.00 0.00 0.00 2.52
6439 7448 9.442047 AGAGAAAGAAAATATTCACACGAATCT 57.558 29.630 0.00 0.00 41.09 2.40
6440 7449 9.695884 GAGAAAGAAAATATTCACACGAATCTC 57.304 33.333 0.00 0.00 41.09 2.75
6441 7450 9.219603 AGAAAGAAAATATTCACACGAATCTCA 57.780 29.630 0.00 0.00 41.09 3.27
6442 7451 9.825972 GAAAGAAAATATTCACACGAATCTCAA 57.174 29.630 0.00 0.00 41.09 3.02
6444 7453 9.778993 AAGAAAATATTCACACGAATCTCAATG 57.221 29.630 0.00 0.00 41.09 2.82
6445 7454 8.950210 AGAAAATATTCACACGAATCTCAATGT 58.050 29.630 0.00 0.00 41.09 2.71
6449 7458 9.599866 AATATTCACACGAATCTCAATGTAAGA 57.400 29.630 0.00 0.00 41.09 2.10
6450 7459 9.770097 ATATTCACACGAATCTCAATGTAAGAT 57.230 29.630 0.00 0.00 41.09 2.40
6451 7460 7.525688 TTCACACGAATCTCAATGTAAGATC 57.474 36.000 0.00 0.00 32.29 2.75
6452 7461 6.630071 TCACACGAATCTCAATGTAAGATCA 58.370 36.000 0.00 0.00 32.29 2.92
6453 7462 7.096551 TCACACGAATCTCAATGTAAGATCAA 58.903 34.615 0.00 0.00 32.29 2.57
6454 7463 7.765819 TCACACGAATCTCAATGTAAGATCAAT 59.234 33.333 0.00 0.00 32.29 2.57
6455 7464 7.849515 CACACGAATCTCAATGTAAGATCAATG 59.150 37.037 0.00 0.00 32.29 2.82
6456 7465 7.765819 ACACGAATCTCAATGTAAGATCAATGA 59.234 33.333 0.00 0.00 32.29 2.57
6457 7466 8.060679 CACGAATCTCAATGTAAGATCAATGAC 58.939 37.037 0.00 0.00 32.29 3.06
6458 7467 7.765819 ACGAATCTCAATGTAAGATCAATGACA 59.234 33.333 0.00 0.00 32.29 3.58
6459 7468 8.771766 CGAATCTCAATGTAAGATCAATGACAT 58.228 33.333 0.00 0.00 32.29 3.06
6473 7482 9.708092 AGATCAATGACATATGACTTAGATGTG 57.292 33.333 10.38 0.00 41.09 3.21
6474 7483 7.719778 TCAATGACATATGACTTAGATGTGC 57.280 36.000 10.38 0.00 41.09 4.57
6475 7484 7.274447 TCAATGACATATGACTTAGATGTGCA 58.726 34.615 10.38 0.00 41.09 4.57
6476 7485 7.769970 TCAATGACATATGACTTAGATGTGCAA 59.230 33.333 10.38 0.00 41.09 4.08
6477 7486 8.565416 CAATGACATATGACTTAGATGTGCAAT 58.435 33.333 10.38 0.00 41.09 3.56
6478 7487 9.783081 AATGACATATGACTTAGATGTGCAATA 57.217 29.630 10.38 0.00 41.09 1.90
6479 7488 8.593492 TGACATATGACTTAGATGTGCAATAC 57.407 34.615 10.38 0.00 41.09 1.89
6480 7489 8.424133 TGACATATGACTTAGATGTGCAATACT 58.576 33.333 10.38 0.00 41.09 2.12
6481 7490 9.265901 GACATATGACTTAGATGTGCAATACTT 57.734 33.333 10.38 0.00 41.09 2.24
6485 7494 8.613060 ATGACTTAGATGTGCAATACTTATGG 57.387 34.615 0.00 0.00 0.00 2.74
6486 7495 6.483307 TGACTTAGATGTGCAATACTTATGGC 59.517 38.462 0.00 0.00 33.16 4.40
6487 7496 6.356556 ACTTAGATGTGCAATACTTATGGCA 58.643 36.000 0.00 0.00 40.19 4.92
6537 7546 7.257722 TGTTTTGACCTTCTCAAACATTCTTC 58.742 34.615 0.00 0.00 46.56 2.87
6540 7549 3.412386 ACCTTCTCAAACATTCTTCGGG 58.588 45.455 0.00 0.00 0.00 5.14
6556 7565 1.353022 TCGGGGGCAGTTTCAAGTTAT 59.647 47.619 0.00 0.00 0.00 1.89
6562 7571 3.267483 GGCAGTTTCAAGTTATCCGCTA 58.733 45.455 0.00 0.00 0.00 4.26
6569 7578 1.679680 CAAGTTATCCGCTACTCCCGA 59.320 52.381 0.00 0.00 0.00 5.14
6570 7579 1.606903 AGTTATCCGCTACTCCCGAG 58.393 55.000 0.00 0.00 0.00 4.63
6575 7584 0.323178 TCCGCTACTCCCGAGAACTT 60.323 55.000 0.00 0.00 0.00 2.66
6577 7586 0.526662 CGCTACTCCCGAGAACTTGT 59.473 55.000 0.00 0.00 0.00 3.16
6586 7595 3.576982 TCCCGAGAACTTGTAAGATGTGT 59.423 43.478 0.00 0.00 0.00 3.72
6593 7602 7.794349 CGAGAACTTGTAAGATGTGTCTTTTTC 59.206 37.037 0.00 0.00 41.92 2.29
6596 7605 7.264373 ACTTGTAAGATGTGTCTTTTTCAGG 57.736 36.000 0.00 0.00 41.92 3.86
6609 7618 6.928492 TGTCTTTTTCAGGCATATTTGAAACC 59.072 34.615 6.39 0.00 41.51 3.27
6616 7625 4.586001 CAGGCATATTTGAAACCTAGCCAT 59.414 41.667 12.75 0.00 43.13 4.40
6617 7626 4.586001 AGGCATATTTGAAACCTAGCCATG 59.414 41.667 12.75 0.00 43.13 3.66
6618 7627 4.262164 GGCATATTTGAAACCTAGCCATGG 60.262 45.833 7.63 7.63 40.50 3.66
6624 7633 2.170607 TGAAACCTAGCCATGGTCTAGC 59.829 50.000 25.78 17.40 36.69 3.42
6625 7634 1.879575 AACCTAGCCATGGTCTAGCA 58.120 50.000 25.78 7.12 36.69 3.49
6629 7638 2.555199 CTAGCCATGGTCTAGCAACAC 58.445 52.381 22.24 1.37 0.00 3.32
6633 7642 2.625737 CCATGGTCTAGCAACACTCAG 58.374 52.381 2.57 0.00 0.00 3.35
6634 7643 2.234661 CCATGGTCTAGCAACACTCAGA 59.765 50.000 2.57 0.00 0.00 3.27
6635 7644 3.306989 CCATGGTCTAGCAACACTCAGAA 60.307 47.826 2.57 0.00 0.00 3.02
6636 7645 3.386768 TGGTCTAGCAACACTCAGAAC 57.613 47.619 0.00 0.00 0.00 3.01
6637 7646 2.698274 TGGTCTAGCAACACTCAGAACA 59.302 45.455 0.00 0.00 32.44 3.18
6638 7647 3.060602 GGTCTAGCAACACTCAGAACAC 58.939 50.000 0.00 0.00 0.00 3.32
6639 7648 3.492656 GGTCTAGCAACACTCAGAACACA 60.493 47.826 0.00 0.00 0.00 3.72
6640 7649 4.119862 GTCTAGCAACACTCAGAACACAA 58.880 43.478 0.00 0.00 0.00 3.33
6641 7650 4.752101 GTCTAGCAACACTCAGAACACAAT 59.248 41.667 0.00 0.00 0.00 2.71
6642 7651 5.926542 GTCTAGCAACACTCAGAACACAATA 59.073 40.000 0.00 0.00 0.00 1.90
6643 7652 6.090088 GTCTAGCAACACTCAGAACACAATAG 59.910 42.308 0.00 0.00 0.00 1.73
6644 7653 4.067896 AGCAACACTCAGAACACAATAGG 58.932 43.478 0.00 0.00 0.00 2.57
6645 7654 3.815401 GCAACACTCAGAACACAATAGGT 59.185 43.478 0.00 0.00 0.00 3.08
6646 7655 4.994852 GCAACACTCAGAACACAATAGGTA 59.005 41.667 0.00 0.00 0.00 3.08
6647 7656 5.643777 GCAACACTCAGAACACAATAGGTAT 59.356 40.000 0.00 0.00 0.00 2.73
6648 7657 6.816640 GCAACACTCAGAACACAATAGGTATA 59.183 38.462 0.00 0.00 0.00 1.47
6649 7658 7.333423 GCAACACTCAGAACACAATAGGTATAA 59.667 37.037 0.00 0.00 0.00 0.98
6650 7659 8.656849 CAACACTCAGAACACAATAGGTATAAC 58.343 37.037 0.00 0.00 0.00 1.89
6651 7660 7.903145 ACACTCAGAACACAATAGGTATAACA 58.097 34.615 0.00 0.00 0.00 2.41
6652 7661 7.817962 ACACTCAGAACACAATAGGTATAACAC 59.182 37.037 0.00 0.00 0.00 3.32
6653 7662 8.035394 CACTCAGAACACAATAGGTATAACACT 58.965 37.037 0.00 0.00 0.00 3.55
6654 7663 8.594550 ACTCAGAACACAATAGGTATAACACTT 58.405 33.333 0.00 0.00 0.00 3.16
6655 7664 9.436957 CTCAGAACACAATAGGTATAACACTTT 57.563 33.333 0.00 0.00 0.00 2.66
6656 7665 9.214957 TCAGAACACAATAGGTATAACACTTTG 57.785 33.333 0.00 0.00 0.00 2.77
6657 7666 7.962918 CAGAACACAATAGGTATAACACTTTGC 59.037 37.037 0.00 0.00 0.00 3.68
6658 7667 6.753107 ACACAATAGGTATAACACTTTGCC 57.247 37.500 0.00 0.00 0.00 4.52
6659 7668 6.242396 ACACAATAGGTATAACACTTTGCCA 58.758 36.000 0.00 0.00 0.00 4.92
6660 7669 6.717540 ACACAATAGGTATAACACTTTGCCAA 59.282 34.615 0.00 0.00 0.00 4.52
6661 7670 7.231722 ACACAATAGGTATAACACTTTGCCAAA 59.768 33.333 0.00 0.00 0.00 3.28
6662 7671 8.085296 CACAATAGGTATAACACTTTGCCAAAA 58.915 33.333 0.00 0.00 0.00 2.44
6663 7672 8.643324 ACAATAGGTATAACACTTTGCCAAAAA 58.357 29.630 0.00 0.00 0.00 1.94
6664 7673 9.139174 CAATAGGTATAACACTTTGCCAAAAAG 57.861 33.333 0.00 0.00 0.00 2.27
6665 7674 6.969993 AGGTATAACACTTTGCCAAAAAGA 57.030 33.333 4.91 0.00 0.00 2.52
6666 7675 6.745116 AGGTATAACACTTTGCCAAAAAGAC 58.255 36.000 4.91 0.00 0.00 3.01
6667 7676 5.924254 GGTATAACACTTTGCCAAAAAGACC 59.076 40.000 4.91 0.00 0.00 3.85
6668 7677 5.869649 ATAACACTTTGCCAAAAAGACCT 57.130 34.783 4.91 0.00 0.00 3.85
6669 7678 4.551702 AACACTTTGCCAAAAAGACCTT 57.448 36.364 4.91 0.00 0.00 3.50
6670 7679 5.669164 AACACTTTGCCAAAAAGACCTTA 57.331 34.783 4.91 0.00 0.00 2.69
6671 7680 5.006153 ACACTTTGCCAAAAAGACCTTAC 57.994 39.130 4.91 0.00 0.00 2.34
6672 7681 4.464597 ACACTTTGCCAAAAAGACCTTACA 59.535 37.500 4.91 0.00 0.00 2.41
6673 7682 5.046950 ACACTTTGCCAAAAAGACCTTACAA 60.047 36.000 4.91 0.00 0.00 2.41
6674 7683 5.519927 CACTTTGCCAAAAAGACCTTACAAG 59.480 40.000 4.91 0.00 0.00 3.16
6675 7684 5.420739 ACTTTGCCAAAAAGACCTTACAAGA 59.579 36.000 4.91 0.00 0.00 3.02
6676 7685 5.923733 TTGCCAAAAAGACCTTACAAGAA 57.076 34.783 0.00 0.00 0.00 2.52
6677 7686 5.923733 TGCCAAAAAGACCTTACAAGAAA 57.076 34.783 0.00 0.00 0.00 2.52
6678 7687 6.287589 TGCCAAAAAGACCTTACAAGAAAA 57.712 33.333 0.00 0.00 0.00 2.29
6679 7688 6.337356 TGCCAAAAAGACCTTACAAGAAAAG 58.663 36.000 0.00 0.00 0.00 2.27
6680 7689 5.234329 GCCAAAAAGACCTTACAAGAAAAGC 59.766 40.000 0.00 0.00 0.00 3.51
6681 7690 6.337356 CCAAAAAGACCTTACAAGAAAAGCA 58.663 36.000 0.00 0.00 0.00 3.91
6682 7691 6.816140 CCAAAAAGACCTTACAAGAAAAGCAA 59.184 34.615 0.00 0.00 0.00 3.91
6683 7692 7.495606 CCAAAAAGACCTTACAAGAAAAGCAAT 59.504 33.333 0.00 0.00 0.00 3.56
6684 7693 8.330302 CAAAAAGACCTTACAAGAAAAGCAATG 58.670 33.333 0.00 0.00 0.00 2.82
6685 7694 6.959639 AAGACCTTACAAGAAAAGCAATGA 57.040 33.333 0.00 0.00 0.00 2.57
6686 7695 6.959639 AGACCTTACAAGAAAAGCAATGAA 57.040 33.333 0.00 0.00 0.00 2.57
6687 7696 6.739112 AGACCTTACAAGAAAAGCAATGAAC 58.261 36.000 0.00 0.00 0.00 3.18
6688 7697 5.842907 ACCTTACAAGAAAAGCAATGAACC 58.157 37.500 0.00 0.00 0.00 3.62
6689 7698 5.221441 ACCTTACAAGAAAAGCAATGAACCC 60.221 40.000 0.00 0.00 0.00 4.11
6690 7699 5.011023 CCTTACAAGAAAAGCAATGAACCCT 59.989 40.000 0.00 0.00 0.00 4.34
6691 7700 4.590850 ACAAGAAAAGCAATGAACCCTC 57.409 40.909 0.00 0.00 0.00 4.30
6692 7701 3.960102 ACAAGAAAAGCAATGAACCCTCA 59.040 39.130 0.00 0.00 35.56 3.86
6693 7702 4.405358 ACAAGAAAAGCAATGAACCCTCAA 59.595 37.500 0.00 0.00 34.49 3.02
6694 7703 4.861102 AGAAAAGCAATGAACCCTCAAG 57.139 40.909 0.00 0.00 34.49 3.02
6695 7704 3.575687 AGAAAAGCAATGAACCCTCAAGG 59.424 43.478 0.00 0.00 43.78 3.61
6696 7705 2.978156 AAGCAATGAACCCTCAAGGA 57.022 45.000 0.00 0.00 39.89 3.36
6697 7706 2.206576 AGCAATGAACCCTCAAGGAC 57.793 50.000 0.00 0.00 39.89 3.85
6698 7707 1.177401 GCAATGAACCCTCAAGGACC 58.823 55.000 0.00 0.00 39.89 4.46
6699 7708 1.547675 GCAATGAACCCTCAAGGACCA 60.548 52.381 0.00 0.00 39.89 4.02
6700 7709 2.875296 CAATGAACCCTCAAGGACCAA 58.125 47.619 0.00 0.00 39.89 3.67
6701 7710 3.230134 CAATGAACCCTCAAGGACCAAA 58.770 45.455 0.00 0.00 39.89 3.28
6702 7711 3.611025 ATGAACCCTCAAGGACCAAAA 57.389 42.857 0.00 0.00 39.89 2.44
6703 7712 3.390175 TGAACCCTCAAGGACCAAAAA 57.610 42.857 0.00 0.00 39.89 1.94
6704 7713 3.295973 TGAACCCTCAAGGACCAAAAAG 58.704 45.455 0.00 0.00 39.89 2.27
6705 7714 1.704641 ACCCTCAAGGACCAAAAAGC 58.295 50.000 0.00 0.00 39.89 3.51
6706 7715 1.063266 ACCCTCAAGGACCAAAAAGCA 60.063 47.619 0.00 0.00 39.89 3.91
6707 7716 2.038659 CCCTCAAGGACCAAAAAGCAA 58.961 47.619 0.00 0.00 38.24 3.91
6708 7717 2.433970 CCCTCAAGGACCAAAAAGCAAA 59.566 45.455 0.00 0.00 38.24 3.68
6709 7718 3.118445 CCCTCAAGGACCAAAAAGCAAAA 60.118 43.478 0.00 0.00 38.24 2.44
6710 7719 3.871006 CCTCAAGGACCAAAAAGCAAAAC 59.129 43.478 0.00 0.00 37.39 2.43
6711 7720 3.867857 TCAAGGACCAAAAAGCAAAACC 58.132 40.909 0.00 0.00 0.00 3.27
6712 7721 3.261897 TCAAGGACCAAAAAGCAAAACCA 59.738 39.130 0.00 0.00 0.00 3.67
6713 7722 3.260475 AGGACCAAAAAGCAAAACCAC 57.740 42.857 0.00 0.00 0.00 4.16
6714 7723 2.093181 AGGACCAAAAAGCAAAACCACC 60.093 45.455 0.00 0.00 0.00 4.61
6715 7724 2.355209 GGACCAAAAAGCAAAACCACCA 60.355 45.455 0.00 0.00 0.00 4.17
6716 7725 3.339141 GACCAAAAAGCAAAACCACCAA 58.661 40.909 0.00 0.00 0.00 3.67
6717 7726 3.944650 GACCAAAAAGCAAAACCACCAAT 59.055 39.130 0.00 0.00 0.00 3.16
6718 7727 5.104259 ACCAAAAAGCAAAACCACCAATA 57.896 34.783 0.00 0.00 0.00 1.90
6719 7728 5.122519 ACCAAAAAGCAAAACCACCAATAG 58.877 37.500 0.00 0.00 0.00 1.73
6720 7729 5.122519 CCAAAAAGCAAAACCACCAATAGT 58.877 37.500 0.00 0.00 0.00 2.12
6721 7730 5.236263 CCAAAAAGCAAAACCACCAATAGTC 59.764 40.000 0.00 0.00 0.00 2.59
6732 7741 3.606687 CACCAATAGTCACCACCTTACC 58.393 50.000 0.00 0.00 0.00 2.85
6735 7744 3.518590 CAATAGTCACCACCTTACCGTC 58.481 50.000 0.00 0.00 0.00 4.79
6787 7796 3.620472 GCCCATGACAAAAGAAATGCCAT 60.620 43.478 0.00 0.00 0.00 4.40
6790 7799 4.807304 CCATGACAAAAGAAATGCCATAGC 59.193 41.667 0.00 0.00 40.48 2.97
6823 7833 1.597742 GTGTGTGTCAATGAGCAGGT 58.402 50.000 0.00 0.00 0.00 4.00
6825 7835 1.140652 TGTGTGTCAATGAGCAGGTCA 59.859 47.619 4.40 4.40 40.38 4.02
6833 7843 0.679002 ATGAGCAGGTCACCATGTGC 60.679 55.000 3.92 0.00 38.28 4.57
6835 7845 2.034687 GCAGGTCACCATGTGCCT 59.965 61.111 0.00 4.93 39.37 4.75
6836 7846 2.042831 GCAGGTCACCATGTGCCTC 61.043 63.158 0.00 1.77 37.74 4.70
6841 7851 0.176680 GTCACCATGTGCCTCGAGAT 59.823 55.000 15.71 0.00 32.98 2.75
6844 7854 0.749649 ACCATGTGCCTCGAGATCTC 59.250 55.000 15.71 13.05 0.00 2.75
6880 7890 2.158385 AGGATCATCCCTACGCTCTTCT 60.158 50.000 0.00 0.00 37.19 2.85
6885 7895 0.039180 TCCCTACGCTCTTCTGTCCA 59.961 55.000 0.00 0.00 0.00 4.02
6886 7896 1.115467 CCCTACGCTCTTCTGTCCAT 58.885 55.000 0.00 0.00 0.00 3.41
6910 7920 1.068474 CGACCGAACTCATCCAACAC 58.932 55.000 0.00 0.00 0.00 3.32
6939 7949 0.670854 GAAGACTCGAAGCCGCCTTT 60.671 55.000 0.00 0.00 35.37 3.11
6940 7950 0.670854 AAGACTCGAAGCCGCCTTTC 60.671 55.000 0.00 0.00 35.37 2.62
6949 7959 2.436646 CCGCCTTTCTGCATCCGT 60.437 61.111 0.00 0.00 0.00 4.69
6974 7984 3.149196 ACATTTGTTGAATCGGCTGTCT 58.851 40.909 0.00 0.00 0.00 3.41
6977 7987 2.839486 TGTTGAATCGGCTGTCTTCT 57.161 45.000 10.51 0.00 0.00 2.85
6994 8004 3.544167 CTAGATCAGGTCGCCGCCG 62.544 68.421 0.00 0.00 0.00 6.46
7021 8031 3.613859 CTCGAAGGAGAAAGCATCAGCG 61.614 54.545 0.00 0.00 44.02 5.18
7042 8052 3.364621 CGTTGCATTTGAAACATAGCCAC 59.635 43.478 2.49 0.00 33.07 5.01
7049 8059 2.733956 TGAAACATAGCCACCAATCCC 58.266 47.619 0.00 0.00 0.00 3.85
7053 8063 2.487775 ACATAGCCACCAATCCCACTA 58.512 47.619 0.00 0.00 0.00 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.351572 ACTATTTCACCATAGTCCCCATATATT 57.648 33.333 0.00 0.00 35.40 1.28
1 2 8.933522 ACTATTTCACCATAGTCCCCATATAT 57.066 34.615 0.00 0.00 35.40 0.86
2 3 8.751215 AACTATTTCACCATAGTCCCCATATA 57.249 34.615 0.00 0.00 38.77 0.86
3 4 7.648177 AACTATTTCACCATAGTCCCCATAT 57.352 36.000 0.00 0.00 38.77 1.78
4 5 7.569485 TGTAACTATTTCACCATAGTCCCCATA 59.431 37.037 0.00 0.00 38.77 2.74
5 6 5.994416 AACTATTTCACCATAGTCCCCAT 57.006 39.130 0.00 0.00 38.77 4.00
6 7 5.727279 TGTAACTATTTCACCATAGTCCCCA 59.273 40.000 0.00 0.00 38.77 4.96
7 8 6.243216 TGTAACTATTTCACCATAGTCCCC 57.757 41.667 0.00 0.00 38.77 4.81
8 9 7.280356 ACATGTAACTATTTCACCATAGTCCC 58.720 38.462 0.00 0.00 38.77 4.46
9 10 9.477484 CTACATGTAACTATTTCACCATAGTCC 57.523 37.037 7.06 0.00 38.77 3.85
11 12 9.817809 CACTACATGTAACTATTTCACCATAGT 57.182 33.333 7.06 0.00 41.02 2.12
12 13 8.765219 GCACTACATGTAACTATTTCACCATAG 58.235 37.037 7.06 0.00 33.50 2.23
13 14 8.261522 TGCACTACATGTAACTATTTCACCATA 58.738 33.333 7.06 0.00 0.00 2.74
14 15 7.065803 GTGCACTACATGTAACTATTTCACCAT 59.934 37.037 10.32 0.00 0.00 3.55
15 16 6.370442 GTGCACTACATGTAACTATTTCACCA 59.630 38.462 10.32 0.00 0.00 4.17
16 17 6.455113 CGTGCACTACATGTAACTATTTCACC 60.455 42.308 16.19 0.00 0.00 4.02
17 18 6.466812 CGTGCACTACATGTAACTATTTCAC 58.533 40.000 16.19 7.31 0.00 3.18
18 19 5.062934 GCGTGCACTACATGTAACTATTTCA 59.937 40.000 16.19 0.00 37.62 2.69
19 20 5.291128 AGCGTGCACTACATGTAACTATTTC 59.709 40.000 16.19 0.00 37.62 2.17
20 21 5.175859 AGCGTGCACTACATGTAACTATTT 58.824 37.500 16.19 0.00 37.62 1.40
21 22 4.755411 AGCGTGCACTACATGTAACTATT 58.245 39.130 16.19 0.00 37.62 1.73
22 23 4.386867 AGCGTGCACTACATGTAACTAT 57.613 40.909 16.19 0.00 37.62 2.12
23 24 3.861276 AGCGTGCACTACATGTAACTA 57.139 42.857 16.19 0.00 37.62 2.24
24 25 2.736721 CAAGCGTGCACTACATGTAACT 59.263 45.455 16.19 0.00 37.62 2.24
25 26 3.103793 CAAGCGTGCACTACATGTAAC 57.896 47.619 16.19 1.25 37.62 2.50
40 41 8.678370 AGGAATACCTAGCTTATCTGCAAGCG 62.678 46.154 0.00 0.00 45.86 4.68
41 42 5.512232 AGGAATACCTAGCTTATCTGCAAGC 60.512 44.000 0.00 0.00 45.83 4.01
42 43 6.107901 AGGAATACCTAGCTTATCTGCAAG 57.892 41.667 0.00 0.00 45.83 4.01
57 58 6.095440 ACATGCATACAACAAGAAGGAATACC 59.905 38.462 0.00 0.00 0.00 2.73
58 59 7.088589 ACATGCATACAACAAGAAGGAATAC 57.911 36.000 0.00 0.00 0.00 1.89
59 60 8.978874 ATACATGCATACAACAAGAAGGAATA 57.021 30.769 0.00 0.00 0.00 1.75
60 61 7.013655 GGATACATGCATACAACAAGAAGGAAT 59.986 37.037 0.00 0.00 0.00 3.01
61 62 6.318648 GGATACATGCATACAACAAGAAGGAA 59.681 38.462 0.00 0.00 0.00 3.36
62 63 5.822519 GGATACATGCATACAACAAGAAGGA 59.177 40.000 0.00 0.00 0.00 3.36
63 64 5.589855 TGGATACATGCATACAACAAGAAGG 59.410 40.000 0.00 0.00 46.17 3.46
64 65 6.682423 TGGATACATGCATACAACAAGAAG 57.318 37.500 0.00 0.00 46.17 2.85
90 91 2.599082 GTCAACAGTCATAGCTACACGC 59.401 50.000 0.00 0.00 39.57 5.34
91 92 3.179830 GGTCAACAGTCATAGCTACACG 58.820 50.000 0.00 0.00 0.00 4.49
92 93 3.179830 CGGTCAACAGTCATAGCTACAC 58.820 50.000 0.00 0.00 0.00 2.90
93 94 2.823747 ACGGTCAACAGTCATAGCTACA 59.176 45.455 0.00 0.00 0.00 2.74
94 95 3.128938 AGACGGTCAACAGTCATAGCTAC 59.871 47.826 11.27 0.00 42.29 3.58
95 96 3.353557 AGACGGTCAACAGTCATAGCTA 58.646 45.455 11.27 0.00 42.29 3.32
96 97 2.171840 AGACGGTCAACAGTCATAGCT 58.828 47.619 11.27 0.00 42.29 3.32
97 98 2.656560 AGACGGTCAACAGTCATAGC 57.343 50.000 11.27 0.00 42.29 2.97
98 99 7.644551 GTCTAATAAGACGGTCAACAGTCATAG 59.355 40.741 11.27 10.68 42.66 2.23
99 100 7.478322 GTCTAATAAGACGGTCAACAGTCATA 58.522 38.462 11.27 8.16 42.66 2.15
100 101 6.331061 GTCTAATAAGACGGTCAACAGTCAT 58.669 40.000 11.27 6.35 42.66 3.06
101 102 5.706916 GTCTAATAAGACGGTCAACAGTCA 58.293 41.667 11.27 0.00 42.66 3.41
114 115 7.572353 GCAAACACACAAATCGGTCTAATAAGA 60.572 37.037 0.00 0.00 0.00 2.10
115 116 6.523201 GCAAACACACAAATCGGTCTAATAAG 59.477 38.462 0.00 0.00 0.00 1.73
116 117 6.375377 GCAAACACACAAATCGGTCTAATAA 58.625 36.000 0.00 0.00 0.00 1.40
117 118 5.390040 CGCAAACACACAAATCGGTCTAATA 60.390 40.000 0.00 0.00 0.00 0.98
118 119 4.612712 CGCAAACACACAAATCGGTCTAAT 60.613 41.667 0.00 0.00 0.00 1.73
119 120 3.303461 CGCAAACACACAAATCGGTCTAA 60.303 43.478 0.00 0.00 0.00 2.10
120 121 2.222213 CGCAAACACACAAATCGGTCTA 59.778 45.455 0.00 0.00 0.00 2.59
121 122 1.002900 CGCAAACACACAAATCGGTCT 60.003 47.619 0.00 0.00 0.00 3.85
122 123 1.394697 CGCAAACACACAAATCGGTC 58.605 50.000 0.00 0.00 0.00 4.79
123 124 0.593773 GCGCAAACACACAAATCGGT 60.594 50.000 0.30 0.00 0.00 4.69
124 125 0.593518 TGCGCAAACACACAAATCGG 60.594 50.000 8.16 0.00 0.00 4.18
125 126 1.383080 GATGCGCAAACACACAAATCG 59.617 47.619 17.11 0.00 0.00 3.34
126 127 2.664916 AGATGCGCAAACACACAAATC 58.335 42.857 17.11 2.62 0.00 2.17
127 128 2.798976 AGATGCGCAAACACACAAAT 57.201 40.000 17.11 0.00 0.00 2.32
128 129 3.251972 TCATAGATGCGCAAACACACAAA 59.748 39.130 17.11 0.00 0.00 2.83
129 130 2.810852 TCATAGATGCGCAAACACACAA 59.189 40.909 17.11 0.00 0.00 3.33
130 131 2.421619 TCATAGATGCGCAAACACACA 58.578 42.857 17.11 0.00 0.00 3.72
131 132 3.680642 ATCATAGATGCGCAAACACAC 57.319 42.857 17.11 1.93 0.00 3.82
132 133 5.277925 CCAATATCATAGATGCGCAAACACA 60.278 40.000 17.11 4.49 0.00 3.72
133 134 5.049474 TCCAATATCATAGATGCGCAAACAC 60.049 40.000 17.11 6.67 0.00 3.32
134 135 5.062528 TCCAATATCATAGATGCGCAAACA 58.937 37.500 17.11 1.60 0.00 2.83
135 136 5.611796 TCCAATATCATAGATGCGCAAAC 57.388 39.130 17.11 12.39 0.00 2.93
136 137 5.939296 TCATCCAATATCATAGATGCGCAAA 59.061 36.000 17.11 2.95 36.81 3.68
137 138 5.490159 TCATCCAATATCATAGATGCGCAA 58.510 37.500 17.11 0.00 36.81 4.85
138 139 5.088680 TCATCCAATATCATAGATGCGCA 57.911 39.130 14.96 14.96 36.81 6.09
139 140 5.756833 TGATCATCCAATATCATAGATGCGC 59.243 40.000 0.00 0.00 36.81 6.09
140 141 7.441458 ACATGATCATCCAATATCATAGATGCG 59.559 37.037 4.86 0.00 40.10 4.73
141 142 8.560374 CACATGATCATCCAATATCATAGATGC 58.440 37.037 4.86 0.00 40.10 3.91
142 143 9.832445 TCACATGATCATCCAATATCATAGATG 57.168 33.333 4.86 0.00 40.10 2.90
144 145 9.832445 CATCACATGATCATCCAATATCATAGA 57.168 33.333 4.86 0.00 40.10 1.98
145 146 9.614792 ACATCACATGATCATCCAATATCATAG 57.385 33.333 4.86 0.00 40.10 2.23
146 147 9.391006 CACATCACATGATCATCCAATATCATA 57.609 33.333 4.86 0.00 40.10 2.15
147 148 7.888546 ACACATCACATGATCATCCAATATCAT 59.111 33.333 4.86 0.00 42.24 2.45
156 157 6.183360 CGGCTATAACACATCACATGATCATC 60.183 42.308 4.86 0.00 31.21 2.92
160 161 4.202357 ACCGGCTATAACACATCACATGAT 60.202 41.667 0.00 0.00 34.56 2.45
163 164 3.838244 ACCGGCTATAACACATCACAT 57.162 42.857 0.00 0.00 0.00 3.21
185 186 6.096423 AGCACGATATACACAGGAAGAACTAA 59.904 38.462 0.00 0.00 0.00 2.24
253 254 0.040942 TGGTACGGCCTAACCCTACA 59.959 55.000 18.01 0.00 38.35 2.74
302 303 4.281182 ACAGATTCGTACTTAGCTATGGGG 59.719 45.833 11.03 0.72 0.00 4.96
391 392 0.736636 ATCATCATTGGTGCGCACAG 59.263 50.000 38.60 25.00 0.00 3.66
401 402 9.967346 AGATTGCTCATTAGAAAATCATCATTG 57.033 29.630 0.00 0.00 33.20 2.82
464 465 7.330454 CGCATGCTTGAATATCTAGTGATAGTT 59.670 37.037 17.13 0.00 38.42 2.24
476 477 9.616634 CTATATTTGTTTCGCATGCTTGAATAT 57.383 29.630 17.13 16.27 0.00 1.28
568 575 9.995003 AACAATTTAATGTACAACAATGTCCAT 57.005 25.926 0.00 0.00 37.68 3.41
625 633 4.638865 ACTTGTAGTTTTCGTTTCTTGGCT 59.361 37.500 0.00 0.00 0.00 4.75
627 635 7.465989 TGTTACTTGTAGTTTTCGTTTCTTGG 58.534 34.615 0.00 0.00 0.00 3.61
668 708 1.179152 TCTTTGCCTGGCATGATGTG 58.821 50.000 24.03 9.15 38.76 3.21
892 940 3.190323 CTCGGTGGTGACGTGACGT 62.190 63.158 11.70 11.70 45.10 4.34
893 941 2.428569 CTCGGTGGTGACGTGACG 60.429 66.667 2.24 2.24 0.00 4.35
894 942 1.371389 GACTCGGTGGTGACGTGAC 60.371 63.158 0.00 0.00 0.00 3.67
933 981 2.352814 CGACTCTCGAGTTGGATTGGTT 60.353 50.000 13.13 0.00 43.74 3.67
1557 1606 1.202915 TCTGCAAATCCCTCAGCAACA 60.203 47.619 0.00 0.00 36.44 3.33
1593 1642 0.440371 GAAGCTTGTACTCACGCTGC 59.560 55.000 2.10 0.00 46.03 5.25
1686 1735 1.069765 ATCTATGAAGGCGGCCACG 59.930 57.895 23.09 2.46 44.63 4.94
1854 1903 8.976986 AGAAGAAAAATAATTGATGAGCACAC 57.023 30.769 0.00 0.00 0.00 3.82
1888 1937 9.630098 CATGTGCTAATTAACAAACTCTGAAAT 57.370 29.630 0.00 0.00 0.00 2.17
1969 2079 1.364171 CCGCATACTCGGCTAAGCT 59.636 57.895 0.00 0.00 43.18 3.74
1970 2080 3.938112 CCGCATACTCGGCTAAGC 58.062 61.111 0.00 0.00 43.18 3.09
1977 2087 0.928229 GCAAGTAACCCGCATACTCG 59.072 55.000 0.00 0.00 32.54 4.18
1978 2088 2.018542 TGCAAGTAACCCGCATACTC 57.981 50.000 0.00 0.00 32.54 2.59
1979 2089 2.483014 TTGCAAGTAACCCGCATACT 57.517 45.000 0.00 0.00 35.19 2.12
1980 2090 3.775661 AATTGCAAGTAACCCGCATAC 57.224 42.857 4.94 0.00 35.19 2.39
1981 2091 4.771903 TCTAATTGCAAGTAACCCGCATA 58.228 39.130 8.12 0.00 35.19 3.14
1982 2092 3.616219 TCTAATTGCAAGTAACCCGCAT 58.384 40.909 8.12 0.00 35.19 4.73
1983 2093 3.060736 TCTAATTGCAAGTAACCCGCA 57.939 42.857 8.12 0.00 0.00 5.69
1984 2094 5.744666 TTATCTAATTGCAAGTAACCCGC 57.255 39.130 8.12 0.00 0.00 6.13
1985 2095 5.527582 AGCTTATCTAATTGCAAGTAACCCG 59.472 40.000 8.12 0.00 0.00 5.28
1986 2096 6.944234 AGCTTATCTAATTGCAAGTAACCC 57.056 37.500 8.12 0.00 0.00 4.11
1987 2097 8.070769 GCTAAGCTTATCTAATTGCAAGTAACC 58.929 37.037 6.64 0.00 0.00 2.85
1988 2098 8.831550 AGCTAAGCTTATCTAATTGCAAGTAAC 58.168 33.333 8.07 0.00 33.89 2.50
1989 2099 8.830580 CAGCTAAGCTTATCTAATTGCAAGTAA 58.169 33.333 9.42 0.24 36.40 2.24
1990 2100 8.204160 TCAGCTAAGCTTATCTAATTGCAAGTA 58.796 33.333 9.42 5.76 36.40 2.24
1991 2101 7.050377 TCAGCTAAGCTTATCTAATTGCAAGT 58.950 34.615 9.42 4.58 36.40 3.16
1992 2102 7.226325 ACTCAGCTAAGCTTATCTAATTGCAAG 59.774 37.037 9.42 9.84 36.40 4.01
1993 2103 7.050377 ACTCAGCTAAGCTTATCTAATTGCAA 58.950 34.615 9.42 0.00 36.40 4.08
1994 2104 6.586344 ACTCAGCTAAGCTTATCTAATTGCA 58.414 36.000 9.42 0.00 36.40 4.08
1995 2105 8.655092 CATACTCAGCTAAGCTTATCTAATTGC 58.345 37.037 9.42 6.53 36.40 3.56
1996 2106 9.703892 ACATACTCAGCTAAGCTTATCTAATTG 57.296 33.333 9.42 6.49 36.40 2.32
1997 2107 9.703892 CACATACTCAGCTAAGCTTATCTAATT 57.296 33.333 9.42 0.42 36.40 1.40
1998 2108 8.310382 CCACATACTCAGCTAAGCTTATCTAAT 58.690 37.037 9.42 1.89 36.40 1.73
1999 2109 7.255977 CCCACATACTCAGCTAAGCTTATCTAA 60.256 40.741 9.42 0.00 36.40 2.10
2000 2110 6.209589 CCCACATACTCAGCTAAGCTTATCTA 59.790 42.308 9.42 0.00 36.40 1.98
2001 2111 5.011533 CCCACATACTCAGCTAAGCTTATCT 59.988 44.000 6.64 5.20 36.40 1.98
2002 2112 5.221541 ACCCACATACTCAGCTAAGCTTATC 60.222 44.000 6.64 2.48 36.40 1.75
2003 2113 4.656112 ACCCACATACTCAGCTAAGCTTAT 59.344 41.667 6.64 0.00 36.40 1.73
2004 2114 4.030913 ACCCACATACTCAGCTAAGCTTA 58.969 43.478 5.94 5.94 36.40 3.09
2005 2115 2.840651 ACCCACATACTCAGCTAAGCTT 59.159 45.455 3.48 3.48 36.40 3.74
2022 2132 0.476023 TACCCCCTGCAAGTAACCCA 60.476 55.000 0.00 0.00 0.00 4.51
2039 2149 7.484035 AGAATCGCAATCTCCTTTTACATAC 57.516 36.000 0.00 0.00 0.00 2.39
2053 2164 9.086336 CAAACATGGTAATTAAAGAATCGCAAT 57.914 29.630 0.00 0.00 0.00 3.56
2072 2183 9.575783 TGAACACATCATAATGAATCAAACATG 57.424 29.630 0.00 0.00 36.67 3.21
2105 2216 5.070580 AGGTCTGTAACTGTTGTTCTAAGCT 59.929 40.000 2.69 0.00 37.59 3.74
2117 2228 0.687354 AGGCCACAGGTCTGTAACTG 59.313 55.000 5.01 0.00 42.83 3.16
2127 2238 1.072331 ACTAACTCACAAGGCCACAGG 59.928 52.381 5.01 0.00 0.00 4.00
2135 2246 6.776094 GCAATAGGCTTAACTAACTCACAAG 58.224 40.000 0.00 0.00 40.25 3.16
2136 2247 6.737254 GCAATAGGCTTAACTAACTCACAA 57.263 37.500 0.00 0.00 40.25 3.33
2197 2308 3.634397 TCTGAAGGTAGGCCAATCTTG 57.366 47.619 5.01 0.00 37.19 3.02
2241 2352 8.204160 CACATATACATCTCCAGGACAACTAAA 58.796 37.037 0.00 0.00 0.00 1.85
2296 2407 4.747540 TCACACATACATCACAAACAGC 57.252 40.909 0.00 0.00 0.00 4.40
2324 2438 8.816144 GCACTTTTGTTTTTGATTACTTCATCA 58.184 29.630 0.00 0.00 33.34 3.07
2325 2439 8.816144 TGCACTTTTGTTTTTGATTACTTCATC 58.184 29.630 0.00 0.00 33.34 2.92
2343 2457 6.403866 TTGTGAAAGGTATCATGCACTTTT 57.596 33.333 6.97 6.97 33.66 2.27
2345 2459 6.594788 ATTTGTGAAAGGTATCATGCACTT 57.405 33.333 0.00 0.00 0.00 3.16
2346 2460 6.594788 AATTTGTGAAAGGTATCATGCACT 57.405 33.333 0.00 0.00 0.00 4.40
2347 2461 8.931385 AATAATTTGTGAAAGGTATCATGCAC 57.069 30.769 0.00 0.00 0.00 4.57
2417 2621 7.550712 AGAACTCCTAAAATTCCAATTGATGC 58.449 34.615 7.12 0.00 0.00 3.91
2476 2680 4.452114 GGAGAACATTTCAATTGTTTGGGC 59.548 41.667 5.13 0.00 33.44 5.36
2548 2752 4.035441 GGCAGGTTTAGTTGTTCGTTGTAA 59.965 41.667 0.00 0.00 0.00 2.41
2551 2755 2.356382 TGGCAGGTTTAGTTGTTCGTTG 59.644 45.455 0.00 0.00 0.00 4.10
2570 2774 2.695147 GGCTAACAGGAATGGGAAATGG 59.305 50.000 0.00 0.00 0.00 3.16
2622 2826 4.814234 GGAATCGTGTAAATGCATCCAGTA 59.186 41.667 0.00 0.00 0.00 2.74
2673 2877 4.424626 TGCTCAAGTTCATTAGAGTAGCG 58.575 43.478 0.00 0.00 0.00 4.26
2698 2902 8.627403 ACTAATTTTCCAATATCATGAGCAGTG 58.373 33.333 0.09 1.02 0.00 3.66
2946 3152 3.051327 CGCAAGTCATGATGTTTGCAAA 58.949 40.909 27.29 8.05 44.54 3.68
2959 3165 1.153469 TGTGAGTGTGCGCAAGTCA 60.153 52.632 14.00 17.76 41.68 3.41
2972 3178 6.471233 TTATCTACATGAAGGACCTGTGAG 57.529 41.667 0.00 0.00 0.00 3.51
3008 3214 3.251729 GGACGCAATCAGATGCAATGTAT 59.748 43.478 0.00 0.00 46.76 2.29
3013 3219 1.532523 TTGGACGCAATCAGATGCAA 58.467 45.000 0.00 0.00 46.76 4.08
3136 3343 0.315568 CGCAGCCATCTACTACCTCC 59.684 60.000 0.00 0.00 0.00 4.30
3430 3640 7.189079 TGTGGTATCTGTATTGTTGTATCCA 57.811 36.000 0.00 0.00 0.00 3.41
3648 3862 1.960689 GTGCTTGGTGGGCTTAGAAAA 59.039 47.619 0.00 0.00 0.00 2.29
3709 3924 6.086011 TGGGTGATGGGATTTTACTATTGT 57.914 37.500 0.00 0.00 0.00 2.71
3960 4175 1.107114 GAGAAGGAGATGAGCGGTCA 58.893 55.000 21.02 21.02 37.02 4.02
4062 4279 2.687566 CTCCACCGGTAAGGCCCT 60.688 66.667 6.87 0.00 46.52 5.19
4169 4387 1.568504 TGGTGGAGATACCTGGTGAC 58.431 55.000 10.23 3.25 41.43 3.67
4288 4506 2.275134 TCCTATGGTACGCGGATACA 57.725 50.000 12.47 6.02 0.00 2.29
4342 4560 3.625649 ACAAAAGCAGGCAAGGAAAAA 57.374 38.095 0.00 0.00 0.00 1.94
4343 4561 3.449018 TGTACAAAAGCAGGCAAGGAAAA 59.551 39.130 0.00 0.00 0.00 2.29
4374 4594 5.144159 TCTCAGGATCCAGTGGTACTATT 57.856 43.478 15.82 0.00 0.00 1.73
4961 5190 5.565439 GCACTGCTTGAATCACACCTTAAAT 60.565 40.000 0.00 0.00 0.00 1.40
5070 5299 1.110442 CCTCTCTCATCTGGCGTTCT 58.890 55.000 0.00 0.00 0.00 3.01
5117 5346 2.354401 CGCTTCCTCTCAGCCTCCA 61.354 63.158 0.00 0.00 33.29 3.86
5145 5374 1.073722 CCTGGCTTGTGCTTCCTCA 59.926 57.895 0.00 0.00 39.59 3.86
5281 5510 4.819630 AGGTTGTTGATAGCGTGAAAAGAA 59.180 37.500 0.00 0.00 0.00 2.52
5420 5651 7.722728 GGGGAGTAATAAGTAACAAATTAGGGG 59.277 40.741 0.00 0.00 0.00 4.79
5421 5652 8.500238 AGGGGAGTAATAAGTAACAAATTAGGG 58.500 37.037 0.00 0.00 0.00 3.53
5500 5750 2.288666 TCTCCGTTCCATAATGCTTGC 58.711 47.619 0.00 0.00 0.00 4.01
5520 5770 6.443995 TCTAGCCCCTTAAAAAGTTACACT 57.556 37.500 0.00 0.00 0.00 3.55
5647 5897 6.764308 AAGACCTGTGACCAAATTATGATG 57.236 37.500 0.00 0.00 0.00 3.07
5785 6041 6.159299 TCAAGCAATCCAAAGAATCAACAA 57.841 33.333 0.00 0.00 0.00 2.83
6151 6723 8.879759 CGAATTAACCACAGAAACATACAGTAT 58.120 33.333 0.00 0.00 0.00 2.12
6152 6724 7.332430 CCGAATTAACCACAGAAACATACAGTA 59.668 37.037 0.00 0.00 0.00 2.74
6153 6725 6.148811 CCGAATTAACCACAGAAACATACAGT 59.851 38.462 0.00 0.00 0.00 3.55
6154 6726 6.148811 ACCGAATTAACCACAGAAACATACAG 59.851 38.462 0.00 0.00 0.00 2.74
6155 6727 5.998981 ACCGAATTAACCACAGAAACATACA 59.001 36.000 0.00 0.00 0.00 2.29
6156 6728 6.311723 CACCGAATTAACCACAGAAACATAC 58.688 40.000 0.00 0.00 0.00 2.39
6157 6729 5.106475 GCACCGAATTAACCACAGAAACATA 60.106 40.000 0.00 0.00 0.00 2.29
6158 6730 4.320935 GCACCGAATTAACCACAGAAACAT 60.321 41.667 0.00 0.00 0.00 2.71
6159 6731 3.003897 GCACCGAATTAACCACAGAAACA 59.996 43.478 0.00 0.00 0.00 2.83
6185 7194 7.228906 AGTTTAGCTCCTAAAGAACAACCTTTC 59.771 37.037 0.00 0.00 36.73 2.62
6263 7272 1.075542 CGGCTGTACGCATCTTTTGA 58.924 50.000 10.92 0.00 41.67 2.69
6265 7274 2.373540 TACGGCTGTACGCATCTTTT 57.626 45.000 0.00 0.00 41.67 2.27
6273 7282 6.307318 GGAATAGAAACATATACGGCTGTACG 59.693 42.308 7.76 2.29 40.31 3.67
6334 7343 4.250116 CATCTAGATGTGCCCTAGACAC 57.750 50.000 22.42 8.47 43.57 3.67
6356 7365 6.758416 CACTTAGATGTGCAATAACTAGAGCA 59.242 38.462 0.00 0.00 34.10 4.26
6357 7366 6.980978 TCACTTAGATGTGCAATAACTAGAGC 59.019 38.462 0.00 0.00 37.81 4.09
6358 7367 8.194104 ACTCACTTAGATGTGCAATAACTAGAG 58.806 37.037 0.00 0.00 37.81 2.43
6359 7368 7.976175 CACTCACTTAGATGTGCAATAACTAGA 59.024 37.037 0.00 0.00 37.81 2.43
6360 7369 7.976175 TCACTCACTTAGATGTGCAATAACTAG 59.024 37.037 0.00 0.00 37.81 2.57
6361 7370 7.836842 TCACTCACTTAGATGTGCAATAACTA 58.163 34.615 0.00 0.00 37.81 2.24
6362 7371 6.701340 TCACTCACTTAGATGTGCAATAACT 58.299 36.000 0.00 0.00 37.81 2.24
6363 7372 6.968131 TCACTCACTTAGATGTGCAATAAC 57.032 37.500 0.00 0.00 37.81 1.89
6364 7373 7.823799 TGATTCACTCACTTAGATGTGCAATAA 59.176 33.333 0.00 0.00 37.81 1.40
6365 7374 7.330262 TGATTCACTCACTTAGATGTGCAATA 58.670 34.615 0.00 0.00 37.81 1.90
6366 7375 6.175471 TGATTCACTCACTTAGATGTGCAAT 58.825 36.000 0.00 0.00 37.81 3.56
6367 7376 5.550290 TGATTCACTCACTTAGATGTGCAA 58.450 37.500 0.00 0.00 37.81 4.08
6368 7377 5.151297 TGATTCACTCACTTAGATGTGCA 57.849 39.130 0.00 0.00 37.81 4.57
6369 7378 5.447010 GCTTGATTCACTCACTTAGATGTGC 60.447 44.000 0.00 0.00 37.81 4.57
6370 7379 5.640783 TGCTTGATTCACTCACTTAGATGTG 59.359 40.000 0.00 0.00 39.15 3.21
6371 7380 5.798132 TGCTTGATTCACTCACTTAGATGT 58.202 37.500 0.00 0.00 32.17 3.06
6372 7381 6.922247 ATGCTTGATTCACTCACTTAGATG 57.078 37.500 0.00 0.00 32.17 2.90
6373 7382 9.107177 CTTTATGCTTGATTCACTCACTTAGAT 57.893 33.333 0.00 0.00 32.17 1.98
6374 7383 8.314021 TCTTTATGCTTGATTCACTCACTTAGA 58.686 33.333 0.00 0.00 32.17 2.10
6375 7384 8.484641 TCTTTATGCTTGATTCACTCACTTAG 57.515 34.615 0.00 0.00 32.17 2.18
6376 7385 8.314021 TCTCTTTATGCTTGATTCACTCACTTA 58.686 33.333 0.00 0.00 32.17 2.24
6377 7386 7.164122 TCTCTTTATGCTTGATTCACTCACTT 58.836 34.615 0.00 0.00 32.17 3.16
6378 7387 6.705302 TCTCTTTATGCTTGATTCACTCACT 58.295 36.000 0.00 0.00 32.17 3.41
6379 7388 6.974932 TCTCTTTATGCTTGATTCACTCAC 57.025 37.500 0.00 0.00 32.17 3.51
6380 7389 7.984422 TTTCTCTTTATGCTTGATTCACTCA 57.016 32.000 0.00 0.00 0.00 3.41
6381 7390 9.339492 CTTTTTCTCTTTATGCTTGATTCACTC 57.661 33.333 0.00 0.00 0.00 3.51
6382 7391 9.071276 TCTTTTTCTCTTTATGCTTGATTCACT 57.929 29.630 0.00 0.00 0.00 3.41
6383 7392 9.683069 TTCTTTTTCTCTTTATGCTTGATTCAC 57.317 29.630 0.00 0.00 0.00 3.18
6413 7422 9.442047 AGATTCGTGTGAATATTTTCTTTCTCT 57.558 29.630 0.00 0.00 44.79 3.10
6414 7423 9.695884 GAGATTCGTGTGAATATTTTCTTTCTC 57.304 33.333 0.00 0.00 44.79 2.87
6415 7424 9.219603 TGAGATTCGTGTGAATATTTTCTTTCT 57.780 29.630 0.00 0.00 44.79 2.52
6416 7425 9.825972 TTGAGATTCGTGTGAATATTTTCTTTC 57.174 29.630 0.00 0.00 44.79 2.62
6418 7427 9.778993 CATTGAGATTCGTGTGAATATTTTCTT 57.221 29.630 0.00 0.00 44.79 2.52
6419 7428 8.950210 ACATTGAGATTCGTGTGAATATTTTCT 58.050 29.630 0.00 0.00 44.79 2.52
6423 7432 9.599866 TCTTACATTGAGATTCGTGTGAATATT 57.400 29.630 0.00 0.00 44.79 1.28
6424 7433 9.770097 ATCTTACATTGAGATTCGTGTGAATAT 57.230 29.630 0.00 0.00 44.79 1.28
6425 7434 9.249457 GATCTTACATTGAGATTCGTGTGAATA 57.751 33.333 0.00 0.00 44.79 1.75
6427 7436 7.096551 TGATCTTACATTGAGATTCGTGTGAA 58.903 34.615 0.00 0.00 38.76 3.18
6428 7437 6.630071 TGATCTTACATTGAGATTCGTGTGA 58.370 36.000 0.00 0.00 34.13 3.58
6429 7438 6.892310 TGATCTTACATTGAGATTCGTGTG 57.108 37.500 0.00 0.00 34.13 3.82
6430 7439 7.765819 TCATTGATCTTACATTGAGATTCGTGT 59.234 33.333 0.00 0.00 34.13 4.49
6431 7440 8.060679 GTCATTGATCTTACATTGAGATTCGTG 58.939 37.037 0.00 0.00 34.13 4.35
6432 7441 7.765819 TGTCATTGATCTTACATTGAGATTCGT 59.234 33.333 0.00 0.00 34.13 3.85
6433 7442 8.134905 TGTCATTGATCTTACATTGAGATTCG 57.865 34.615 0.00 0.00 34.13 3.34
6447 7456 9.708092 CACATCTAAGTCATATGTCATTGATCT 57.292 33.333 1.90 0.00 31.60 2.75
6448 7457 8.441608 GCACATCTAAGTCATATGTCATTGATC 58.558 37.037 1.90 0.00 31.60 2.92
6449 7458 7.935210 TGCACATCTAAGTCATATGTCATTGAT 59.065 33.333 1.90 0.00 31.60 2.57
6450 7459 7.274447 TGCACATCTAAGTCATATGTCATTGA 58.726 34.615 1.90 0.00 31.60 2.57
6451 7460 7.486802 TGCACATCTAAGTCATATGTCATTG 57.513 36.000 1.90 0.00 31.60 2.82
6452 7461 8.687292 ATTGCACATCTAAGTCATATGTCATT 57.313 30.769 1.90 0.00 31.60 2.57
6453 7462 9.212641 GTATTGCACATCTAAGTCATATGTCAT 57.787 33.333 1.90 0.00 31.60 3.06
6454 7463 8.424133 AGTATTGCACATCTAAGTCATATGTCA 58.576 33.333 1.90 0.00 31.60 3.58
6455 7464 8.824159 AGTATTGCACATCTAAGTCATATGTC 57.176 34.615 1.90 0.00 31.60 3.06
6459 7468 9.710900 CCATAAGTATTGCACATCTAAGTCATA 57.289 33.333 0.00 0.00 0.00 2.15
6460 7469 7.173907 GCCATAAGTATTGCACATCTAAGTCAT 59.826 37.037 0.00 0.00 0.00 3.06
6461 7470 6.483307 GCCATAAGTATTGCACATCTAAGTCA 59.517 38.462 0.00 0.00 0.00 3.41
6462 7471 6.483307 TGCCATAAGTATTGCACATCTAAGTC 59.517 38.462 0.00 0.00 30.49 3.01
6463 7472 6.356556 TGCCATAAGTATTGCACATCTAAGT 58.643 36.000 0.00 0.00 30.49 2.24
6464 7473 6.866010 TGCCATAAGTATTGCACATCTAAG 57.134 37.500 0.00 0.00 30.49 2.18
6472 7481 6.173427 TCTAGATGTGCCATAAGTATTGCA 57.827 37.500 0.00 0.00 32.69 4.08
6473 7482 7.069852 CATCTAGATGTGCCATAAGTATTGC 57.930 40.000 22.42 0.00 34.23 3.56
6516 7525 4.515191 CCGAAGAATGTTTGAGAAGGTCAA 59.485 41.667 0.00 0.00 43.82 3.18
6517 7526 4.065088 CCGAAGAATGTTTGAGAAGGTCA 58.935 43.478 0.00 0.00 0.00 4.02
6518 7527 3.437049 CCCGAAGAATGTTTGAGAAGGTC 59.563 47.826 0.00 0.00 0.00 3.85
6519 7528 3.412386 CCCGAAGAATGTTTGAGAAGGT 58.588 45.455 0.00 0.00 0.00 3.50
6520 7529 2.749621 CCCCGAAGAATGTTTGAGAAGG 59.250 50.000 0.00 0.00 0.00 3.46
6521 7530 2.749621 CCCCCGAAGAATGTTTGAGAAG 59.250 50.000 0.00 0.00 0.00 2.85
6522 7531 2.790433 CCCCCGAAGAATGTTTGAGAA 58.210 47.619 0.00 0.00 0.00 2.87
6523 7532 1.613255 GCCCCCGAAGAATGTTTGAGA 60.613 52.381 0.00 0.00 0.00 3.27
6524 7533 0.811281 GCCCCCGAAGAATGTTTGAG 59.189 55.000 0.00 0.00 0.00 3.02
6525 7534 0.111446 TGCCCCCGAAGAATGTTTGA 59.889 50.000 0.00 0.00 0.00 2.69
6526 7535 0.527565 CTGCCCCCGAAGAATGTTTG 59.472 55.000 0.00 0.00 0.00 2.93
6527 7536 0.112412 ACTGCCCCCGAAGAATGTTT 59.888 50.000 0.00 0.00 0.00 2.83
6528 7537 0.112412 AACTGCCCCCGAAGAATGTT 59.888 50.000 0.00 0.00 0.00 2.71
6537 7546 1.743394 GATAACTTGAAACTGCCCCCG 59.257 52.381 0.00 0.00 0.00 5.73
6540 7549 1.132453 GCGGATAACTTGAAACTGCCC 59.868 52.381 0.00 0.00 0.00 5.36
6556 7565 0.323178 AAGTTCTCGGGAGTAGCGGA 60.323 55.000 0.00 0.00 0.00 5.54
6562 7571 3.833070 ACATCTTACAAGTTCTCGGGAGT 59.167 43.478 0.00 0.00 0.00 3.85
6569 7578 8.506168 TGAAAAAGACACATCTTACAAGTTCT 57.494 30.769 0.00 0.00 44.82 3.01
6570 7579 7.857885 CCTGAAAAAGACACATCTTACAAGTTC 59.142 37.037 0.00 0.00 44.82 3.01
6575 7584 5.129634 TGCCTGAAAAAGACACATCTTACA 58.870 37.500 0.00 0.00 44.82 2.41
6577 7586 8.579850 AATATGCCTGAAAAAGACACATCTTA 57.420 30.769 0.00 0.00 44.82 2.10
6586 7595 7.301868 AGGTTTCAAATATGCCTGAAAAAGA 57.698 32.000 8.63 0.00 41.79 2.52
6593 7602 3.953612 TGGCTAGGTTTCAAATATGCCTG 59.046 43.478 0.00 0.00 39.77 4.85
6596 7605 4.342092 ACCATGGCTAGGTTTCAAATATGC 59.658 41.667 13.04 0.00 35.33 3.14
6609 7618 2.169352 AGTGTTGCTAGACCATGGCTAG 59.831 50.000 26.36 26.36 38.65 3.42
6616 7625 2.698274 TGTTCTGAGTGTTGCTAGACCA 59.302 45.455 0.00 0.00 0.00 4.02
6617 7626 3.060602 GTGTTCTGAGTGTTGCTAGACC 58.939 50.000 0.00 0.00 0.00 3.85
6618 7627 3.717707 TGTGTTCTGAGTGTTGCTAGAC 58.282 45.455 0.00 0.00 0.00 2.59
6624 7633 8.656849 GTTATACCTATTGTGTTCTGAGTGTTG 58.343 37.037 0.00 0.00 0.00 3.33
6625 7634 8.372459 TGTTATACCTATTGTGTTCTGAGTGTT 58.628 33.333 0.00 0.00 0.00 3.32
6629 7638 9.436957 AAAGTGTTATACCTATTGTGTTCTGAG 57.563 33.333 0.00 0.00 0.00 3.35
6633 7642 7.094549 TGGCAAAGTGTTATACCTATTGTGTTC 60.095 37.037 0.00 0.00 0.00 3.18
6634 7643 6.717540 TGGCAAAGTGTTATACCTATTGTGTT 59.282 34.615 0.00 0.00 0.00 3.32
6635 7644 6.242396 TGGCAAAGTGTTATACCTATTGTGT 58.758 36.000 0.00 0.00 0.00 3.72
6636 7645 6.751514 TGGCAAAGTGTTATACCTATTGTG 57.248 37.500 0.00 0.00 0.00 3.33
6637 7646 7.768807 TTTGGCAAAGTGTTATACCTATTGT 57.231 32.000 8.93 0.00 0.00 2.71
6638 7647 9.139174 CTTTTTGGCAAAGTGTTATACCTATTG 57.861 33.333 13.04 0.00 0.00 1.90
6639 7648 9.084533 TCTTTTTGGCAAAGTGTTATACCTATT 57.915 29.630 13.04 0.00 0.00 1.73
6640 7649 8.520351 GTCTTTTTGGCAAAGTGTTATACCTAT 58.480 33.333 13.04 0.00 0.00 2.57
6641 7650 7.040271 GGTCTTTTTGGCAAAGTGTTATACCTA 60.040 37.037 13.04 0.00 0.00 3.08
6642 7651 6.239204 GGTCTTTTTGGCAAAGTGTTATACCT 60.239 38.462 13.04 0.00 0.00 3.08
6643 7652 5.924254 GGTCTTTTTGGCAAAGTGTTATACC 59.076 40.000 13.04 10.76 0.00 2.73
6644 7653 6.745116 AGGTCTTTTTGGCAAAGTGTTATAC 58.255 36.000 13.04 6.06 0.00 1.47
6645 7654 6.969993 AGGTCTTTTTGGCAAAGTGTTATA 57.030 33.333 13.04 0.00 0.00 0.98
6646 7655 5.869649 AGGTCTTTTTGGCAAAGTGTTAT 57.130 34.783 13.04 0.00 0.00 1.89
6647 7656 5.669164 AAGGTCTTTTTGGCAAAGTGTTA 57.331 34.783 13.04 0.00 0.00 2.41
6648 7657 4.551702 AAGGTCTTTTTGGCAAAGTGTT 57.448 36.364 13.04 0.29 0.00 3.32
6649 7658 4.464597 TGTAAGGTCTTTTTGGCAAAGTGT 59.535 37.500 13.04 0.00 0.00 3.55
6650 7659 5.004922 TGTAAGGTCTTTTTGGCAAAGTG 57.995 39.130 13.04 9.91 0.00 3.16
6651 7660 5.420739 TCTTGTAAGGTCTTTTTGGCAAAGT 59.579 36.000 13.04 0.00 0.00 2.66
6652 7661 5.901552 TCTTGTAAGGTCTTTTTGGCAAAG 58.098 37.500 13.04 2.48 0.00 2.77
6653 7662 5.923733 TCTTGTAAGGTCTTTTTGGCAAA 57.076 34.783 8.93 8.93 0.00 3.68
6654 7663 5.923733 TTCTTGTAAGGTCTTTTTGGCAA 57.076 34.783 0.00 0.00 0.00 4.52
6655 7664 5.923733 TTTCTTGTAAGGTCTTTTTGGCA 57.076 34.783 0.00 0.00 0.00 4.92
6656 7665 5.234329 GCTTTTCTTGTAAGGTCTTTTTGGC 59.766 40.000 0.00 0.00 0.00 4.52
6657 7666 6.337356 TGCTTTTCTTGTAAGGTCTTTTTGG 58.663 36.000 0.00 0.00 0.00 3.28
6658 7667 7.826260 TTGCTTTTCTTGTAAGGTCTTTTTG 57.174 32.000 0.00 0.00 0.00 2.44
6659 7668 8.257306 TCATTGCTTTTCTTGTAAGGTCTTTTT 58.743 29.630 0.00 0.00 0.00 1.94
6660 7669 7.781056 TCATTGCTTTTCTTGTAAGGTCTTTT 58.219 30.769 0.00 0.00 0.00 2.27
6661 7670 7.346751 TCATTGCTTTTCTTGTAAGGTCTTT 57.653 32.000 0.00 0.00 0.00 2.52
6662 7671 6.959639 TCATTGCTTTTCTTGTAAGGTCTT 57.040 33.333 0.00 0.00 0.00 3.01
6663 7672 6.239036 GGTTCATTGCTTTTCTTGTAAGGTCT 60.239 38.462 0.00 0.00 0.00 3.85
6664 7673 5.920840 GGTTCATTGCTTTTCTTGTAAGGTC 59.079 40.000 0.00 0.00 0.00 3.85
6665 7674 5.221441 GGGTTCATTGCTTTTCTTGTAAGGT 60.221 40.000 0.00 0.00 0.00 3.50
6666 7675 5.011023 AGGGTTCATTGCTTTTCTTGTAAGG 59.989 40.000 0.00 0.00 0.00 2.69
6667 7676 6.089249 AGGGTTCATTGCTTTTCTTGTAAG 57.911 37.500 0.00 0.00 0.00 2.34
6668 7677 5.596361 TGAGGGTTCATTGCTTTTCTTGTAA 59.404 36.000 0.00 0.00 0.00 2.41
6669 7678 5.136828 TGAGGGTTCATTGCTTTTCTTGTA 58.863 37.500 0.00 0.00 0.00 2.41
6670 7679 3.960102 TGAGGGTTCATTGCTTTTCTTGT 59.040 39.130 0.00 0.00 0.00 3.16
6671 7680 4.589216 TGAGGGTTCATTGCTTTTCTTG 57.411 40.909 0.00 0.00 0.00 3.02
6672 7681 4.039609 CCTTGAGGGTTCATTGCTTTTCTT 59.960 41.667 0.00 0.00 32.27 2.52
6673 7682 3.575687 CCTTGAGGGTTCATTGCTTTTCT 59.424 43.478 0.00 0.00 32.27 2.52
6674 7683 3.573967 TCCTTGAGGGTTCATTGCTTTTC 59.426 43.478 0.00 0.00 36.25 2.29
6675 7684 3.321968 GTCCTTGAGGGTTCATTGCTTTT 59.678 43.478 0.00 0.00 36.25 2.27
6676 7685 2.893489 GTCCTTGAGGGTTCATTGCTTT 59.107 45.455 0.00 0.00 36.25 3.51
6677 7686 2.519013 GTCCTTGAGGGTTCATTGCTT 58.481 47.619 0.00 0.00 36.25 3.91
6678 7687 1.272147 GGTCCTTGAGGGTTCATTGCT 60.272 52.381 0.00 0.00 36.25 3.91
6679 7688 1.177401 GGTCCTTGAGGGTTCATTGC 58.823 55.000 0.00 0.00 36.25 3.56
6680 7689 2.584835 TGGTCCTTGAGGGTTCATTG 57.415 50.000 0.00 0.00 36.25 2.82
6681 7690 3.611025 TTTGGTCCTTGAGGGTTCATT 57.389 42.857 0.00 0.00 36.25 2.57
6682 7691 3.611025 TTTTGGTCCTTGAGGGTTCAT 57.389 42.857 0.00 0.00 36.25 2.57
6683 7692 3.295973 CTTTTTGGTCCTTGAGGGTTCA 58.704 45.455 0.00 0.00 36.25 3.18
6684 7693 2.035961 GCTTTTTGGTCCTTGAGGGTTC 59.964 50.000 0.00 0.00 36.25 3.62
6685 7694 2.039418 GCTTTTTGGTCCTTGAGGGTT 58.961 47.619 0.00 0.00 36.25 4.11
6686 7695 1.063266 TGCTTTTTGGTCCTTGAGGGT 60.063 47.619 0.00 0.00 36.25 4.34
6687 7696 1.703411 TGCTTTTTGGTCCTTGAGGG 58.297 50.000 0.00 0.00 35.41 4.30
6688 7697 3.817709 TTTGCTTTTTGGTCCTTGAGG 57.182 42.857 0.00 0.00 0.00 3.86
6689 7698 3.871006 GGTTTTGCTTTTTGGTCCTTGAG 59.129 43.478 0.00 0.00 0.00 3.02
6690 7699 3.261897 TGGTTTTGCTTTTTGGTCCTTGA 59.738 39.130 0.00 0.00 0.00 3.02
6691 7700 3.373748 GTGGTTTTGCTTTTTGGTCCTTG 59.626 43.478 0.00 0.00 0.00 3.61
6692 7701 3.605634 GTGGTTTTGCTTTTTGGTCCTT 58.394 40.909 0.00 0.00 0.00 3.36
6693 7702 2.093181 GGTGGTTTTGCTTTTTGGTCCT 60.093 45.455 0.00 0.00 0.00 3.85
6694 7703 2.285083 GGTGGTTTTGCTTTTTGGTCC 58.715 47.619 0.00 0.00 0.00 4.46
6695 7704 2.979240 TGGTGGTTTTGCTTTTTGGTC 58.021 42.857 0.00 0.00 0.00 4.02
6696 7705 3.425162 TTGGTGGTTTTGCTTTTTGGT 57.575 38.095 0.00 0.00 0.00 3.67
6697 7706 5.122519 ACTATTGGTGGTTTTGCTTTTTGG 58.877 37.500 0.00 0.00 0.00 3.28
6698 7707 5.814705 TGACTATTGGTGGTTTTGCTTTTTG 59.185 36.000 0.00 0.00 0.00 2.44
6699 7708 5.815222 GTGACTATTGGTGGTTTTGCTTTTT 59.185 36.000 0.00 0.00 0.00 1.94
6700 7709 5.356426 GTGACTATTGGTGGTTTTGCTTTT 58.644 37.500 0.00 0.00 0.00 2.27
6701 7710 4.202212 GGTGACTATTGGTGGTTTTGCTTT 60.202 41.667 0.00 0.00 0.00 3.51
6702 7711 3.320826 GGTGACTATTGGTGGTTTTGCTT 59.679 43.478 0.00 0.00 0.00 3.91
6703 7712 2.890945 GGTGACTATTGGTGGTTTTGCT 59.109 45.455 0.00 0.00 0.00 3.91
6704 7713 2.625790 TGGTGACTATTGGTGGTTTTGC 59.374 45.455 0.00 0.00 0.00 3.68
6705 7714 3.005367 GGTGGTGACTATTGGTGGTTTTG 59.995 47.826 0.00 0.00 0.00 2.44
6706 7715 3.117284 AGGTGGTGACTATTGGTGGTTTT 60.117 43.478 0.00 0.00 0.00 2.43
6707 7716 2.445525 AGGTGGTGACTATTGGTGGTTT 59.554 45.455 0.00 0.00 0.00 3.27
6708 7717 2.062636 AGGTGGTGACTATTGGTGGTT 58.937 47.619 0.00 0.00 0.00 3.67
6709 7718 1.742308 AGGTGGTGACTATTGGTGGT 58.258 50.000 0.00 0.00 0.00 4.16
6710 7719 2.879103 AAGGTGGTGACTATTGGTGG 57.121 50.000 0.00 0.00 0.00 4.61
6711 7720 3.606687 GGTAAGGTGGTGACTATTGGTG 58.393 50.000 0.00 0.00 0.00 4.17
6712 7721 2.235402 CGGTAAGGTGGTGACTATTGGT 59.765 50.000 0.00 0.00 0.00 3.67
6713 7722 2.235402 ACGGTAAGGTGGTGACTATTGG 59.765 50.000 0.00 0.00 0.00 3.16
6714 7723 3.518590 GACGGTAAGGTGGTGACTATTG 58.481 50.000 0.00 0.00 0.00 1.90
6715 7724 2.165030 CGACGGTAAGGTGGTGACTATT 59.835 50.000 0.00 0.00 0.00 1.73
6716 7725 1.747355 CGACGGTAAGGTGGTGACTAT 59.253 52.381 0.00 0.00 0.00 2.12
6717 7726 1.167851 CGACGGTAAGGTGGTGACTA 58.832 55.000 0.00 0.00 0.00 2.59
6718 7727 1.962144 CGACGGTAAGGTGGTGACT 59.038 57.895 0.00 0.00 0.00 3.41
6719 7728 1.735559 GCGACGGTAAGGTGGTGAC 60.736 63.158 0.00 0.00 0.00 3.67
6720 7729 2.652530 GCGACGGTAAGGTGGTGA 59.347 61.111 0.00 0.00 0.00 4.02
6721 7730 2.433664 GGCGACGGTAAGGTGGTG 60.434 66.667 0.00 0.00 0.00 4.17
6735 7744 0.317938 CTCTCCTATTTCCGACGGCG 60.318 60.000 9.66 1.94 37.24 6.46
6747 7756 1.555075 GGCATGTTGGTGTCTCTCCTA 59.445 52.381 0.00 0.00 0.00 2.94
6790 7799 1.280746 CACACCGCAGCTTTGTCTG 59.719 57.895 0.00 0.00 37.15 3.51
6804 7813 1.532868 GACCTGCTCATTGACACACAC 59.467 52.381 0.00 0.00 0.00 3.82
6823 7833 0.461548 GATCTCGAGGCACATGGTGA 59.538 55.000 13.56 0.00 35.23 4.02
6825 7835 0.749649 GAGATCTCGAGGCACATGGT 59.250 55.000 13.56 0.00 0.00 3.55
6844 7854 0.316522 ATCCTGATCATCGAGCCACG 59.683 55.000 0.00 0.00 44.09 4.94
6857 7867 1.145945 AGAGCGTAGGGATGATCCTGA 59.854 52.381 11.87 0.00 37.75 3.86
6859 7869 2.158385 AGAAGAGCGTAGGGATGATCCT 60.158 50.000 11.87 0.10 40.79 3.24
6868 7878 1.202463 CCATGGACAGAAGAGCGTAGG 60.202 57.143 5.56 0.00 0.00 3.18
6872 7882 0.809241 GAGCCATGGACAGAAGAGCG 60.809 60.000 18.40 0.00 0.00 5.03
6880 7890 2.279810 TTCGGTCGAGCCATGGACA 61.280 57.895 18.40 0.00 35.98 4.02
6885 7895 0.103208 GATGAGTTCGGTCGAGCCAT 59.897 55.000 9.39 6.02 36.97 4.40
6886 7896 1.511305 GATGAGTTCGGTCGAGCCA 59.489 57.895 9.39 0.65 36.97 4.75
6910 7920 1.027255 TCGAGTCTTCTCTCTGGCGG 61.027 60.000 0.00 0.00 38.45 6.13
6939 7949 3.937814 ACAAATGTTAGACGGATGCAGA 58.062 40.909 0.00 0.00 0.00 4.26
6940 7950 4.154015 TCAACAAATGTTAGACGGATGCAG 59.846 41.667 0.00 0.00 36.32 4.41
6949 7959 4.759693 ACAGCCGATTCAACAAATGTTAGA 59.240 37.500 0.00 0.00 36.32 2.10
6974 7984 1.734137 GCGGCGACCTGATCTAGAA 59.266 57.895 12.98 0.00 0.00 2.10
6977 7987 3.592814 CGGCGGCGACCTGATCTA 61.593 66.667 29.19 0.00 0.00 1.98
6994 8004 1.355066 CTTTCTCCTTCGAGTGCGGC 61.355 60.000 0.00 0.00 37.40 6.53
7021 8031 3.679502 GGTGGCTATGTTTCAAATGCAAC 59.320 43.478 0.00 0.00 0.00 4.17
7022 8032 3.323115 TGGTGGCTATGTTTCAAATGCAA 59.677 39.130 0.00 0.00 0.00 4.08
7023 8033 2.896044 TGGTGGCTATGTTTCAAATGCA 59.104 40.909 0.00 0.00 0.00 3.96
7028 8038 3.096092 GGGATTGGTGGCTATGTTTCAA 58.904 45.455 0.00 0.00 0.00 2.69
7029 8039 2.042297 TGGGATTGGTGGCTATGTTTCA 59.958 45.455 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.