Multiple sequence alignment - TraesCS1A01G182500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G182500 chr1A 100.000 2585 0 0 1 2585 330089366 330086782 0.000000e+00 4774.0
1 TraesCS1A01G182500 chr1A 97.347 377 5 2 1792 2163 330087328 330086952 1.010000e-178 636.0
2 TraesCS1A01G182500 chr1A 97.347 377 5 2 2039 2415 330087575 330087204 1.010000e-178 636.0
3 TraesCS1A01G182500 chr1A 90.029 341 33 1 403 742 481627495 481627835 8.490000e-120 440.0
4 TraesCS1A01G182500 chr1A 94.400 125 2 2 1792 1911 330087076 330086952 1.220000e-43 187.0
5 TraesCS1A01G182500 chr1A 94.400 125 2 2 2291 2415 330087575 330087456 1.220000e-43 187.0
6 TraesCS1A01G182500 chr1A 96.000 100 4 0 2197 2296 330086948 330086849 2.060000e-36 163.0
7 TraesCS1A01G182500 chr1A 96.000 100 4 0 2419 2518 330087170 330087071 2.060000e-36 163.0
8 TraesCS1A01G182500 chr1A 94.000 100 6 0 1945 2044 330086948 330086849 4.460000e-33 152.0
9 TraesCS1A01G182500 chr1A 94.000 100 6 0 2419 2518 330087422 330087323 4.460000e-33 152.0
10 TraesCS1A01G182500 chr1D 96.468 1529 33 12 776 2296 256785295 256783780 0.000000e+00 2505.0
11 TraesCS1A01G182500 chr1D 96.032 378 13 2 2039 2415 256784289 256783913 4.730000e-172 614.0
12 TraesCS1A01G182500 chr1D 84.728 478 53 12 3 477 458803280 458802820 6.520000e-126 460.0
13 TraesCS1A01G182500 chr1D 96.124 258 5 2 1792 2044 256784037 256783780 1.430000e-112 416.0
14 TraesCS1A01G182500 chr1D 96.053 152 6 0 2419 2570 256783879 256783728 5.520000e-62 248.0
15 TraesCS1A01G182500 chr1D 97.619 126 3 0 2291 2416 256784289 256784164 1.560000e-52 217.0
16 TraesCS1A01G182500 chr1D 93.000 100 6 1 2419 2518 256784130 256784032 7.460000e-31 145.0
17 TraesCS1A01G182500 chr1B 94.934 1283 42 10 771 2044 356450418 356451686 0.000000e+00 1988.0
18 TraesCS1A01G182500 chr1B 94.595 259 12 2 2039 2296 356451429 356451686 1.440000e-107 399.0
19 TraesCS1A01G182500 chr1B 93.902 164 9 1 2419 2582 356451588 356451750 1.990000e-61 246.0
20 TraesCS1A01G182500 chr1B 97.600 125 3 0 2291 2415 356451429 356451553 5.600000e-52 215.0
21 TraesCS1A01G182500 chr3A 91.242 628 47 3 121 745 487474088 487474710 0.000000e+00 848.0
22 TraesCS1A01G182500 chr7B 87.135 754 64 8 3 734 455231018 455230276 0.000000e+00 824.0
23 TraesCS1A01G182500 chr7D 86.667 750 77 11 3 734 465835482 465836226 0.000000e+00 809.0
24 TraesCS1A01G182500 chr7D 89.919 248 24 1 488 735 219288686 219288440 4.150000e-83 318.0
25 TraesCS1A01G182500 chr7A 87.040 733 61 15 5 734 182687522 182686821 0.000000e+00 797.0
26 TraesCS1A01G182500 chr4A 86.096 748 64 16 3 734 465258221 465258944 0.000000e+00 769.0
27 TraesCS1A01G182500 chr4A 89.241 474 43 3 2 472 673924454 673923986 1.030000e-163 586.0
28 TraesCS1A01G182500 chr3D 85.180 749 79 14 3 736 460901020 460901751 0.000000e+00 739.0
29 TraesCS1A01G182500 chr2D 89.034 611 43 15 129 734 47288334 47287743 0.000000e+00 736.0
30 TraesCS1A01G182500 chr2D 84.154 751 74 23 3 735 643052942 643052219 0.000000e+00 686.0
31 TraesCS1A01G182500 chr2D 89.723 253 23 3 488 739 648110522 648110772 1.150000e-83 320.0
32 TraesCS1A01G182500 chr2A 84.267 750 86 13 3 737 84207230 84206498 0.000000e+00 702.0
33 TraesCS1A01G182500 chr6D 85.513 497 49 13 258 735 113904661 113904169 4.970000e-137 497.0
34 TraesCS1A01G182500 chr4B 81.063 602 95 14 987 1571 673474691 673474092 1.810000e-126 462.0
35 TraesCS1A01G182500 chr4D 82.109 531 87 7 1047 1571 491345726 491346254 5.070000e-122 448.0
36 TraesCS1A01G182500 chr5A 82.752 487 76 7 1047 1527 707532579 707533063 6.610000e-116 427.0
37 TraesCS1A01G182500 chr5D 90.283 247 22 2 488 734 367799971 367799727 3.210000e-84 322.0
38 TraesCS1A01G182500 chr2B 88.636 44 4 1 959 1001 537427120 537427163 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G182500 chr1A 330086782 330089366 2584 True 783.333333 4774 95.943778 1 2585 9 chr1A.!!$R1 2584
1 TraesCS1A01G182500 chr1D 256783728 256785295 1567 True 690.833333 2505 95.882667 776 2570 6 chr1D.!!$R2 1794
2 TraesCS1A01G182500 chr1B 356450418 356451750 1332 False 712.000000 1988 95.257750 771 2582 4 chr1B.!!$F1 1811
3 TraesCS1A01G182500 chr3A 487474088 487474710 622 False 848.000000 848 91.242000 121 745 1 chr3A.!!$F1 624
4 TraesCS1A01G182500 chr7B 455230276 455231018 742 True 824.000000 824 87.135000 3 734 1 chr7B.!!$R1 731
5 TraesCS1A01G182500 chr7D 465835482 465836226 744 False 809.000000 809 86.667000 3 734 1 chr7D.!!$F1 731
6 TraesCS1A01G182500 chr7A 182686821 182687522 701 True 797.000000 797 87.040000 5 734 1 chr7A.!!$R1 729
7 TraesCS1A01G182500 chr4A 465258221 465258944 723 False 769.000000 769 86.096000 3 734 1 chr4A.!!$F1 731
8 TraesCS1A01G182500 chr3D 460901020 460901751 731 False 739.000000 739 85.180000 3 736 1 chr3D.!!$F1 733
9 TraesCS1A01G182500 chr2D 47287743 47288334 591 True 736.000000 736 89.034000 129 734 1 chr2D.!!$R1 605
10 TraesCS1A01G182500 chr2D 643052219 643052942 723 True 686.000000 686 84.154000 3 735 1 chr2D.!!$R2 732
11 TraesCS1A01G182500 chr2A 84206498 84207230 732 True 702.000000 702 84.267000 3 737 1 chr2A.!!$R1 734
12 TraesCS1A01G182500 chr4B 673474092 673474691 599 True 462.000000 462 81.063000 987 1571 1 chr4B.!!$R1 584
13 TraesCS1A01G182500 chr4D 491345726 491346254 528 False 448.000000 448 82.109000 1047 1571 1 chr4D.!!$F1 524

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
254 256 0.312729 TAGAACTTCACACGAGCGCA 59.687 50.0 11.47 0.0 0.0 6.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1951 2054 0.10576 AAGCCCCACAAACCACATCA 60.106 50.0 0.0 0.0 0.0 3.07 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
126 127 3.181471 ACGCCAAAAATCACCATCACAAA 60.181 39.130 0.00 0.00 0.00 2.83
187 189 2.158682 TGCACTCCACTTACACCAACAT 60.159 45.455 0.00 0.00 0.00 2.71
196 198 1.890876 TACACCAACATGACACCTGC 58.109 50.000 0.00 0.00 0.00 4.85
212 214 2.134630 CTGCAGAAGACCCAGCCCTT 62.135 60.000 8.42 0.00 0.00 3.95
254 256 0.312729 TAGAACTTCACACGAGCGCA 59.687 50.000 11.47 0.00 0.00 6.09
255 257 0.529773 AGAACTTCACACGAGCGCAA 60.530 50.000 11.47 0.00 0.00 4.85
427 481 3.333219 CAAGCAGCAGGGGGAGGA 61.333 66.667 0.00 0.00 0.00 3.71
659 743 4.694982 TGTAGACGTATTGAGTGACCGTAA 59.305 41.667 0.00 0.00 0.00 3.18
689 773 6.017770 CGTATTTTGAGGTACAGTGACCAAAA 60.018 38.462 12.45 12.05 42.47 2.44
724 808 3.206150 CAAGTTCAAGTACTGCCAGTGT 58.794 45.455 7.83 0.00 0.00 3.55
738 822 9.379791 GTACTGCCAGTGTATTTTACTCTTAAT 57.620 33.333 7.83 0.00 30.75 1.40
740 824 9.953565 ACTGCCAGTGTATTTTACTCTTAATAA 57.046 29.630 0.00 0.00 30.75 1.40
760 844 9.575783 TTAATAAATTTCCATTTCGTTACCTGC 57.424 29.630 0.00 0.00 34.29 4.85
761 845 5.461032 AAATTTCCATTTCGTTACCTGCA 57.539 34.783 0.00 0.00 0.00 4.41
762 846 5.461032 AATTTCCATTTCGTTACCTGCAA 57.539 34.783 0.00 0.00 0.00 4.08
763 847 4.920640 TTTCCATTTCGTTACCTGCAAA 57.079 36.364 0.00 0.00 0.00 3.68
764 848 4.920640 TTCCATTTCGTTACCTGCAAAA 57.079 36.364 0.00 0.00 0.00 2.44
765 849 4.920640 TCCATTTCGTTACCTGCAAAAA 57.079 36.364 0.00 0.00 0.00 1.94
835 921 3.637273 ACCCAAGGGACCGAGTGC 61.637 66.667 13.15 0.00 38.96 4.40
847 933 1.214062 CGAGTGCTCCAGAGTCCAC 59.786 63.158 0.00 0.00 0.00 4.02
848 934 1.214062 GAGTGCTCCAGAGTCCACG 59.786 63.158 0.00 0.00 0.00 4.94
849 935 2.219325 GAGTGCTCCAGAGTCCACGG 62.219 65.000 0.00 0.00 0.00 4.94
850 936 3.695606 TGCTCCAGAGTCCACGGC 61.696 66.667 0.00 0.00 0.00 5.68
851 937 3.386237 GCTCCAGAGTCCACGGCT 61.386 66.667 0.00 0.00 0.00 5.52
852 938 2.888863 CTCCAGAGTCCACGGCTC 59.111 66.667 0.00 0.79 0.00 4.70
853 939 2.680352 TCCAGAGTCCACGGCTCC 60.680 66.667 4.53 0.00 33.69 4.70
854 940 2.997315 CCAGAGTCCACGGCTCCA 60.997 66.667 4.53 0.00 33.69 3.86
941 1028 0.327576 ATCATTTCCTCCGACCCCCT 60.328 55.000 0.00 0.00 0.00 4.79
946 1033 4.787280 CCTCCGACCCCCTGCTCT 62.787 72.222 0.00 0.00 0.00 4.09
1611 1713 2.897436 TCCTGTTCGCTCAGATCAATG 58.103 47.619 7.96 0.00 37.61 2.82
1658 1760 7.151308 AGAATGGATTATTTTTGCGTTTGTCA 58.849 30.769 0.00 0.00 0.00 3.58
1676 1778 2.680339 GTCATTCTCCAGTTTAGCTGCC 59.320 50.000 0.00 0.00 43.71 4.85
1748 1851 6.019318 CGATCAAATGGATGATTTTGGCTTTC 60.019 38.462 0.00 0.00 40.08 2.62
1765 1868 3.126858 GCTTTCTTACAATGTCGGATGCA 59.873 43.478 0.00 0.00 0.00 3.96
1817 1920 7.870509 TTGCTGAGCAATAAGAGTATTTGAT 57.129 32.000 17.04 0.00 43.99 2.57
1818 1921 8.962884 TTGCTGAGCAATAAGAGTATTTGATA 57.037 30.769 17.04 0.00 43.99 2.15
1819 1922 9.565090 TTGCTGAGCAATAAGAGTATTTGATAT 57.435 29.630 17.04 0.00 43.99 1.63
1820 1923 9.565090 TGCTGAGCAATAAGAGTATTTGATATT 57.435 29.630 3.81 0.00 34.76 1.28
1828 1931 9.669353 AATAAGAGTATTTGATATTTTGCAGCG 57.331 29.630 0.00 0.00 0.00 5.18
1829 1932 6.925610 AGAGTATTTGATATTTTGCAGCGA 57.074 33.333 0.00 0.00 0.00 4.93
1830 1933 7.502120 AGAGTATTTGATATTTTGCAGCGAT 57.498 32.000 0.00 0.00 0.00 4.58
1831 1934 7.934457 AGAGTATTTGATATTTTGCAGCGATT 58.066 30.769 0.00 0.00 0.00 3.34
1832 1935 9.056005 AGAGTATTTGATATTTTGCAGCGATTA 57.944 29.630 0.00 0.00 0.00 1.75
1833 1936 9.107367 GAGTATTTGATATTTTGCAGCGATTAC 57.893 33.333 0.00 0.00 0.00 1.89
1834 1937 8.620416 AGTATTTGATATTTTGCAGCGATTACA 58.380 29.630 0.00 0.00 0.00 2.41
1835 1938 7.919313 ATTTGATATTTTGCAGCGATTACAG 57.081 32.000 0.00 0.00 0.00 2.74
1836 1939 6.435430 TTGATATTTTGCAGCGATTACAGT 57.565 33.333 0.00 0.00 0.00 3.55
1837 1940 6.435430 TGATATTTTGCAGCGATTACAGTT 57.565 33.333 0.00 0.00 0.00 3.16
1838 1941 6.257423 TGATATTTTGCAGCGATTACAGTTG 58.743 36.000 0.00 0.00 0.00 3.16
1839 1942 3.980646 TTTTGCAGCGATTACAGTTGT 57.019 38.095 0.00 0.00 0.00 3.32
1840 1943 2.967459 TTGCAGCGATTACAGTTGTG 57.033 45.000 0.00 0.00 0.00 3.33
1841 1944 2.162319 TGCAGCGATTACAGTTGTGA 57.838 45.000 0.00 0.00 0.00 3.58
1842 1945 2.488952 TGCAGCGATTACAGTTGTGAA 58.511 42.857 0.00 0.00 0.00 3.18
1843 1946 2.875317 TGCAGCGATTACAGTTGTGAAA 59.125 40.909 0.00 0.00 0.00 2.69
1844 1947 3.226347 GCAGCGATTACAGTTGTGAAAC 58.774 45.455 0.00 0.00 37.35 2.78
1860 1963 6.875948 TGTGAAACATGTACTGCAGTATTT 57.124 33.333 28.37 22.85 45.67 1.40
1861 1964 7.971183 TGTGAAACATGTACTGCAGTATTTA 57.029 32.000 28.37 18.04 45.67 1.40
1862 1965 8.028540 TGTGAAACATGTACTGCAGTATTTAG 57.971 34.615 28.37 19.71 45.67 1.85
1863 1966 7.659799 TGTGAAACATGTACTGCAGTATTTAGT 59.340 33.333 28.37 20.28 45.67 2.24
1864 1967 9.146984 GTGAAACATGTACTGCAGTATTTAGTA 57.853 33.333 28.37 11.97 36.32 1.82
1865 1968 9.713713 TGAAACATGTACTGCAGTATTTAGTAA 57.286 29.630 28.37 3.51 32.54 2.24
1867 1970 9.938280 AAACATGTACTGCAGTATTTAGTAAGA 57.062 29.630 28.37 5.57 32.54 2.10
1868 1971 9.938280 AACATGTACTGCAGTATTTAGTAAGAA 57.062 29.630 28.37 1.33 32.54 2.52
1872 1975 9.938280 TGTACTGCAGTATTTAGTAAGAATGTT 57.062 29.630 28.37 0.00 32.54 2.71
1875 1978 9.155975 ACTGCAGTATTTAGTAAGAATGTTCAG 57.844 33.333 20.16 0.00 0.00 3.02
1876 1979 9.155975 CTGCAGTATTTAGTAAGAATGTTCAGT 57.844 33.333 5.25 0.00 0.00 3.41
1877 1980 9.502091 TGCAGTATTTAGTAAGAATGTTCAGTT 57.498 29.630 0.00 0.00 0.00 3.16
1885 1988 7.678947 AGTAAGAATGTTCAGTTTGATGAGG 57.321 36.000 0.00 0.00 0.00 3.86
1886 1989 7.453393 AGTAAGAATGTTCAGTTTGATGAGGA 58.547 34.615 0.00 0.00 0.00 3.71
1887 1990 8.105829 AGTAAGAATGTTCAGTTTGATGAGGAT 58.894 33.333 0.00 0.00 0.00 3.24
1888 1991 9.383519 GTAAGAATGTTCAGTTTGATGAGGATA 57.616 33.333 0.00 0.00 0.00 2.59
1889 1992 8.868522 AAGAATGTTCAGTTTGATGAGGATAA 57.131 30.769 0.00 0.00 0.00 1.75
1890 1993 8.503458 AGAATGTTCAGTTTGATGAGGATAAG 57.497 34.615 0.00 0.00 0.00 1.73
1891 1994 8.324306 AGAATGTTCAGTTTGATGAGGATAAGA 58.676 33.333 0.00 0.00 0.00 2.10
1892 1995 8.503458 AATGTTCAGTTTGATGAGGATAAGAG 57.497 34.615 0.00 0.00 0.00 2.85
1893 1996 7.009179 TGTTCAGTTTGATGAGGATAAGAGT 57.991 36.000 0.00 0.00 0.00 3.24
1894 1997 6.875726 TGTTCAGTTTGATGAGGATAAGAGTG 59.124 38.462 0.00 0.00 0.00 3.51
1895 1998 5.423015 TCAGTTTGATGAGGATAAGAGTGC 58.577 41.667 0.00 0.00 0.00 4.40
1896 1999 5.046376 TCAGTTTGATGAGGATAAGAGTGCA 60.046 40.000 0.00 0.00 0.00 4.57
1897 2000 5.821470 CAGTTTGATGAGGATAAGAGTGCAT 59.179 40.000 0.00 0.00 0.00 3.96
1898 2001 6.318144 CAGTTTGATGAGGATAAGAGTGCATT 59.682 38.462 0.00 0.00 0.00 3.56
1899 2002 6.318144 AGTTTGATGAGGATAAGAGTGCATTG 59.682 38.462 0.00 0.00 0.00 2.82
1900 2003 5.363562 TGATGAGGATAAGAGTGCATTGT 57.636 39.130 0.00 0.00 0.00 2.71
1901 2004 5.121105 TGATGAGGATAAGAGTGCATTGTG 58.879 41.667 0.00 0.00 0.00 3.33
1902 2005 3.877559 TGAGGATAAGAGTGCATTGTGG 58.122 45.455 0.00 0.00 0.00 4.17
1903 2006 3.519107 TGAGGATAAGAGTGCATTGTGGA 59.481 43.478 0.00 0.00 0.00 4.02
1904 2007 4.164796 TGAGGATAAGAGTGCATTGTGGAT 59.835 41.667 0.00 0.00 0.00 3.41
1905 2008 5.121380 AGGATAAGAGTGCATTGTGGATT 57.879 39.130 0.00 0.00 0.00 3.01
1906 2009 6.126796 TGAGGATAAGAGTGCATTGTGGATTA 60.127 38.462 0.00 0.00 0.00 1.75
1907 2010 6.058183 AGGATAAGAGTGCATTGTGGATTAC 58.942 40.000 0.00 0.00 0.00 1.89
1908 2011 6.058183 GGATAAGAGTGCATTGTGGATTACT 58.942 40.000 0.00 0.00 0.00 2.24
1909 2012 6.203723 GGATAAGAGTGCATTGTGGATTACTC 59.796 42.308 0.00 0.00 35.88 2.59
1910 2013 4.558226 AGAGTGCATTGTGGATTACTCA 57.442 40.909 0.00 0.00 37.57 3.41
1911 2014 4.511527 AGAGTGCATTGTGGATTACTCAG 58.488 43.478 0.00 0.00 37.57 3.35
1912 2015 3.614092 AGTGCATTGTGGATTACTCAGG 58.386 45.455 0.00 0.00 0.00 3.86
1913 2016 3.009473 AGTGCATTGTGGATTACTCAGGT 59.991 43.478 0.00 0.00 0.00 4.00
1914 2017 3.758554 GTGCATTGTGGATTACTCAGGTT 59.241 43.478 0.00 0.00 0.00 3.50
1915 2018 4.218417 GTGCATTGTGGATTACTCAGGTTT 59.782 41.667 0.00 0.00 0.00 3.27
1916 2019 4.832266 TGCATTGTGGATTACTCAGGTTTT 59.168 37.500 0.00 0.00 0.00 2.43
1917 2020 5.048083 TGCATTGTGGATTACTCAGGTTTTC 60.048 40.000 0.00 0.00 0.00 2.29
1918 2021 5.048083 GCATTGTGGATTACTCAGGTTTTCA 60.048 40.000 0.00 0.00 0.00 2.69
1919 2022 6.350445 GCATTGTGGATTACTCAGGTTTTCAT 60.350 38.462 0.00 0.00 0.00 2.57
1920 2023 6.573664 TTGTGGATTACTCAGGTTTTCATG 57.426 37.500 0.00 0.00 0.00 3.07
1921 2024 4.458989 TGTGGATTACTCAGGTTTTCATGC 59.541 41.667 0.00 0.00 0.00 4.06
1922 2025 4.016444 TGGATTACTCAGGTTTTCATGCC 58.984 43.478 0.00 0.00 0.00 4.40
1923 2026 4.263905 TGGATTACTCAGGTTTTCATGCCT 60.264 41.667 0.00 0.00 35.04 4.75
1927 2030 3.502237 CAGGTTTTCATGCCTGTGC 57.498 52.632 8.51 0.00 45.28 4.57
1928 2031 0.037975 CAGGTTTTCATGCCTGTGCC 60.038 55.000 8.51 0.00 45.28 5.01
1929 2032 1.080569 GGTTTTCATGCCTGTGCCG 60.081 57.895 0.00 0.00 36.33 5.69
1930 2033 1.659794 GTTTTCATGCCTGTGCCGT 59.340 52.632 0.00 0.00 36.33 5.68
1931 2034 0.664166 GTTTTCATGCCTGTGCCGTG 60.664 55.000 0.00 0.00 36.33 4.94
1932 2035 1.106351 TTTTCATGCCTGTGCCGTGT 61.106 50.000 0.00 0.00 36.33 4.49
1933 2036 1.794151 TTTCATGCCTGTGCCGTGTG 61.794 55.000 0.00 0.00 36.33 3.82
1934 2037 2.956799 TTCATGCCTGTGCCGTGTGT 62.957 55.000 0.00 0.00 36.33 3.72
1935 2038 2.203337 ATGCCTGTGCCGTGTGTT 60.203 55.556 0.00 0.00 36.33 3.32
1936 2039 1.072332 ATGCCTGTGCCGTGTGTTA 59.928 52.632 0.00 0.00 36.33 2.41
1937 2040 0.536233 ATGCCTGTGCCGTGTGTTAA 60.536 50.000 0.00 0.00 36.33 2.01
1938 2041 0.536233 TGCCTGTGCCGTGTGTTAAT 60.536 50.000 0.00 0.00 36.33 1.40
1939 2042 0.596082 GCCTGTGCCGTGTGTTAATT 59.404 50.000 0.00 0.00 0.00 1.40
1940 2043 1.000717 GCCTGTGCCGTGTGTTAATTT 60.001 47.619 0.00 0.00 0.00 1.82
1941 2044 2.660490 CCTGTGCCGTGTGTTAATTTG 58.340 47.619 0.00 0.00 0.00 2.32
1942 2045 2.050691 CTGTGCCGTGTGTTAATTTGC 58.949 47.619 0.00 0.00 0.00 3.68
1943 2046 1.269309 TGTGCCGTGTGTTAATTTGCC 60.269 47.619 0.00 0.00 0.00 4.52
1944 2047 1.000717 GTGCCGTGTGTTAATTTGCCT 60.001 47.619 0.00 0.00 0.00 4.75
1945 2048 1.000827 TGCCGTGTGTTAATTTGCCTG 60.001 47.619 0.00 0.00 0.00 4.85
1946 2049 1.000717 GCCGTGTGTTAATTTGCCTGT 60.001 47.619 0.00 0.00 0.00 4.00
1947 2050 2.920647 GCCGTGTGTTAATTTGCCTGTC 60.921 50.000 0.00 0.00 0.00 3.51
1948 2051 2.552315 CCGTGTGTTAATTTGCCTGTCT 59.448 45.455 0.00 0.00 0.00 3.41
1949 2052 3.004315 CCGTGTGTTAATTTGCCTGTCTT 59.996 43.478 0.00 0.00 0.00 3.01
1950 2053 4.219033 CGTGTGTTAATTTGCCTGTCTTC 58.781 43.478 0.00 0.00 0.00 2.87
1951 2054 4.024048 CGTGTGTTAATTTGCCTGTCTTCT 60.024 41.667 0.00 0.00 0.00 2.85
1952 2055 5.215160 GTGTGTTAATTTGCCTGTCTTCTG 58.785 41.667 0.00 0.00 0.00 3.02
1953 2056 5.008613 GTGTGTTAATTTGCCTGTCTTCTGA 59.991 40.000 0.00 0.00 0.00 3.27
1954 2057 5.769662 TGTGTTAATTTGCCTGTCTTCTGAT 59.230 36.000 0.00 0.00 0.00 2.90
1955 2058 6.088824 GTGTTAATTTGCCTGTCTTCTGATG 58.911 40.000 0.00 0.00 0.00 3.07
1956 2059 5.769662 TGTTAATTTGCCTGTCTTCTGATGT 59.230 36.000 0.00 0.00 0.00 3.06
1957 2060 4.778534 AATTTGCCTGTCTTCTGATGTG 57.221 40.909 0.00 0.00 0.00 3.21
1958 2061 2.189594 TTGCCTGTCTTCTGATGTGG 57.810 50.000 0.00 0.00 0.00 4.17
1959 2062 1.059098 TGCCTGTCTTCTGATGTGGT 58.941 50.000 0.00 0.00 0.00 4.16
1960 2063 1.421268 TGCCTGTCTTCTGATGTGGTT 59.579 47.619 0.00 0.00 0.00 3.67
1961 2064 2.158623 TGCCTGTCTTCTGATGTGGTTT 60.159 45.455 0.00 0.00 0.00 3.27
1962 2065 2.227388 GCCTGTCTTCTGATGTGGTTTG 59.773 50.000 0.00 0.00 0.00 2.93
1963 2066 3.480470 CCTGTCTTCTGATGTGGTTTGT 58.520 45.455 0.00 0.00 0.00 2.83
1964 2067 3.251729 CCTGTCTTCTGATGTGGTTTGTG 59.748 47.826 0.00 0.00 0.00 3.33
1965 2068 3.213506 TGTCTTCTGATGTGGTTTGTGG 58.786 45.455 0.00 0.00 0.00 4.17
1966 2069 2.554032 GTCTTCTGATGTGGTTTGTGGG 59.446 50.000 0.00 0.00 0.00 4.61
1967 2070 1.888512 CTTCTGATGTGGTTTGTGGGG 59.111 52.381 0.00 0.00 0.00 4.96
1968 2071 0.539438 TCTGATGTGGTTTGTGGGGC 60.539 55.000 0.00 0.00 0.00 5.80
1969 2072 0.540365 CTGATGTGGTTTGTGGGGCT 60.540 55.000 0.00 0.00 0.00 5.19
1970 2073 0.105760 TGATGTGGTTTGTGGGGCTT 60.106 50.000 0.00 0.00 0.00 4.35
1971 2074 0.603065 GATGTGGTTTGTGGGGCTTC 59.397 55.000 0.00 0.00 0.00 3.86
1972 2075 0.105760 ATGTGGTTTGTGGGGCTTCA 60.106 50.000 0.00 0.00 0.00 3.02
1973 2076 0.754957 TGTGGTTTGTGGGGCTTCAG 60.755 55.000 0.00 0.00 0.00 3.02
1974 2077 0.467290 GTGGTTTGTGGGGCTTCAGA 60.467 55.000 0.00 0.00 0.00 3.27
1975 2078 0.260230 TGGTTTGTGGGGCTTCAGAA 59.740 50.000 0.00 0.00 0.00 3.02
1976 2079 1.133199 TGGTTTGTGGGGCTTCAGAAT 60.133 47.619 0.00 0.00 0.00 2.40
1977 2080 1.970640 GGTTTGTGGGGCTTCAGAATT 59.029 47.619 0.00 0.00 0.00 2.17
1978 2081 2.368548 GGTTTGTGGGGCTTCAGAATTT 59.631 45.455 0.00 0.00 0.00 1.82
1979 2082 3.181455 GGTTTGTGGGGCTTCAGAATTTT 60.181 43.478 0.00 0.00 0.00 1.82
1980 2083 4.039852 GGTTTGTGGGGCTTCAGAATTTTA 59.960 41.667 0.00 0.00 0.00 1.52
1981 2084 5.279960 GGTTTGTGGGGCTTCAGAATTTTAT 60.280 40.000 0.00 0.00 0.00 1.40
1982 2085 5.404466 TTGTGGGGCTTCAGAATTTTATG 57.596 39.130 0.00 0.00 0.00 1.90
1983 2086 4.671831 TGTGGGGCTTCAGAATTTTATGA 58.328 39.130 0.00 0.00 0.00 2.15
1984 2087 5.083122 TGTGGGGCTTCAGAATTTTATGAA 58.917 37.500 0.95 0.95 36.19 2.57
1993 2096 8.670804 CTTCAGAATTTTATGAAGCTGTTCTG 57.329 34.615 13.03 0.00 45.74 3.02
1994 2097 7.984422 TCAGAATTTTATGAAGCTGTTCTGA 57.016 32.000 9.97 9.97 44.36 3.27
1995 2098 8.037382 TCAGAATTTTATGAAGCTGTTCTGAG 57.963 34.615 9.97 0.00 42.77 3.35
1996 2099 7.120285 TCAGAATTTTATGAAGCTGTTCTGAGG 59.880 37.037 9.97 0.00 42.77 3.86
1997 2100 6.944862 AGAATTTTATGAAGCTGTTCTGAGGT 59.055 34.615 0.00 0.00 33.38 3.85
1998 2101 7.449704 AGAATTTTATGAAGCTGTTCTGAGGTT 59.550 33.333 0.00 0.00 36.38 3.50
1999 2102 5.947228 TTTATGAAGCTGTTCTGAGGTTG 57.053 39.130 0.00 0.00 33.83 3.77
2000 2103 3.777106 ATGAAGCTGTTCTGAGGTTGA 57.223 42.857 0.00 0.00 33.83 3.18
2001 2104 3.777106 TGAAGCTGTTCTGAGGTTGAT 57.223 42.857 0.00 0.00 33.83 2.57
2002 2105 3.405831 TGAAGCTGTTCTGAGGTTGATG 58.594 45.455 0.00 0.00 33.83 3.07
2003 2106 2.486472 AGCTGTTCTGAGGTTGATGG 57.514 50.000 0.00 0.00 0.00 3.51
2004 2107 1.701847 AGCTGTTCTGAGGTTGATGGT 59.298 47.619 0.00 0.00 0.00 3.55
2005 2108 2.107204 AGCTGTTCTGAGGTTGATGGTT 59.893 45.455 0.00 0.00 0.00 3.67
2006 2109 2.887152 GCTGTTCTGAGGTTGATGGTTT 59.113 45.455 0.00 0.00 0.00 3.27
2007 2110 4.072131 GCTGTTCTGAGGTTGATGGTTTA 58.928 43.478 0.00 0.00 0.00 2.01
2008 2111 4.702131 GCTGTTCTGAGGTTGATGGTTTAT 59.298 41.667 0.00 0.00 0.00 1.40
2009 2112 5.880332 GCTGTTCTGAGGTTGATGGTTTATA 59.120 40.000 0.00 0.00 0.00 0.98
2010 2113 6.037610 GCTGTTCTGAGGTTGATGGTTTATAG 59.962 42.308 0.00 0.00 0.00 1.31
2011 2114 5.880332 TGTTCTGAGGTTGATGGTTTATAGC 59.120 40.000 0.00 0.00 0.00 2.97
2012 2115 5.957771 TCTGAGGTTGATGGTTTATAGCT 57.042 39.130 0.00 0.00 0.00 3.32
2013 2116 7.093068 TGTTCTGAGGTTGATGGTTTATAGCTA 60.093 37.037 0.00 0.00 0.00 3.32
2014 2117 7.618019 TCTGAGGTTGATGGTTTATAGCTAT 57.382 36.000 11.77 11.77 0.00 2.97
2015 2118 7.445121 TCTGAGGTTGATGGTTTATAGCTATG 58.555 38.462 16.77 0.00 0.00 2.23
2016 2119 5.997746 TGAGGTTGATGGTTTATAGCTATGC 59.002 40.000 16.77 6.39 0.00 3.14
2017 2120 6.183361 TGAGGTTGATGGTTTATAGCTATGCT 60.183 38.462 16.77 0.00 43.41 3.79
2018 2121 6.234177 AGGTTGATGGTTTATAGCTATGCTC 58.766 40.000 16.77 6.00 40.44 4.26
2019 2122 5.120830 GGTTGATGGTTTATAGCTATGCTCG 59.879 44.000 16.77 0.00 40.44 5.03
2020 2123 4.245660 TGATGGTTTATAGCTATGCTCGC 58.754 43.478 16.77 2.36 40.44 5.03
2021 2124 3.040147 TGGTTTATAGCTATGCTCGCC 57.960 47.619 16.77 11.04 40.44 5.54
2022 2125 2.367241 TGGTTTATAGCTATGCTCGCCA 59.633 45.455 16.77 13.22 40.44 5.69
2023 2126 3.007940 TGGTTTATAGCTATGCTCGCCAT 59.992 43.478 16.77 0.00 40.44 4.40
2024 2127 3.372206 GGTTTATAGCTATGCTCGCCATG 59.628 47.826 16.77 0.00 40.44 3.66
2025 2128 2.967599 TATAGCTATGCTCGCCATGG 57.032 50.000 16.77 7.63 40.44 3.66
2026 2129 0.251354 ATAGCTATGCTCGCCATGGG 59.749 55.000 15.13 3.69 40.44 4.00
2027 2130 2.454832 TAGCTATGCTCGCCATGGGC 62.455 60.000 15.13 9.32 42.02 5.36
2044 2147 1.826385 GGCACCTATGTTCTGTTGCT 58.174 50.000 0.00 0.00 0.00 3.91
2045 2148 1.470098 GGCACCTATGTTCTGTTGCTG 59.530 52.381 0.00 0.00 0.00 4.41
2046 2149 2.426522 GCACCTATGTTCTGTTGCTGA 58.573 47.619 0.00 0.00 0.00 4.26
2047 2150 2.417933 GCACCTATGTTCTGTTGCTGAG 59.582 50.000 0.00 0.00 0.00 3.35
2048 2151 2.417933 CACCTATGTTCTGTTGCTGAGC 59.582 50.000 0.00 0.00 0.00 4.26
2049 2152 2.038952 ACCTATGTTCTGTTGCTGAGCA 59.961 45.455 1.40 1.40 36.47 4.26
2050 2153 3.076621 CCTATGTTCTGTTGCTGAGCAA 58.923 45.455 17.04 17.04 46.80 3.91
2181 2536 0.469705 AGGTTTTCATGCCTGTGCCA 60.470 50.000 0.00 0.00 36.33 4.92
2188 2543 1.175654 CATGCCTGTGCCATGTGTTA 58.824 50.000 0.00 0.00 36.33 2.41
2207 2562 6.939730 TGTGTTAATTTGCCTGTCTTCTGATA 59.060 34.615 0.00 0.00 0.00 2.15
2231 2586 3.554960 GGTTTGTGGGGCTTCAGAATTTC 60.555 47.826 0.00 0.00 0.00 2.17
2248 2603 5.415077 AGAATTTCATGAAGCTGTTCTGAGG 59.585 40.000 18.49 0.00 33.38 3.86
2249 2604 3.777106 TTCATGAAGCTGTTCTGAGGT 57.223 42.857 3.38 0.00 33.38 3.85
2250 2605 3.777106 TCATGAAGCTGTTCTGAGGTT 57.223 42.857 0.00 0.00 36.38 3.50
2251 2606 3.405831 TCATGAAGCTGTTCTGAGGTTG 58.594 45.455 0.00 0.00 33.83 3.77
2252 2607 3.071457 TCATGAAGCTGTTCTGAGGTTGA 59.929 43.478 0.00 0.00 33.83 3.18
2253 2608 3.777106 TGAAGCTGTTCTGAGGTTGAT 57.223 42.857 0.00 0.00 33.83 2.57
2254 2609 3.405831 TGAAGCTGTTCTGAGGTTGATG 58.594 45.455 0.00 0.00 33.83 3.07
2255 2610 2.486472 AGCTGTTCTGAGGTTGATGG 57.514 50.000 0.00 0.00 0.00 3.51
2256 2611 1.701847 AGCTGTTCTGAGGTTGATGGT 59.298 47.619 0.00 0.00 0.00 3.55
2257 2612 2.107204 AGCTGTTCTGAGGTTGATGGTT 59.893 45.455 0.00 0.00 0.00 3.67
2258 2613 2.887152 GCTGTTCTGAGGTTGATGGTTT 59.113 45.455 0.00 0.00 0.00 3.27
2259 2614 4.072131 GCTGTTCTGAGGTTGATGGTTTA 58.928 43.478 0.00 0.00 0.00 2.01
2260 2615 4.702131 GCTGTTCTGAGGTTGATGGTTTAT 59.298 41.667 0.00 0.00 0.00 1.40
2261 2616 5.880332 GCTGTTCTGAGGTTGATGGTTTATA 59.120 40.000 0.00 0.00 0.00 0.98
2262 2617 6.037610 GCTGTTCTGAGGTTGATGGTTTATAG 59.962 42.308 0.00 0.00 0.00 1.31
2263 2618 5.880332 TGTTCTGAGGTTGATGGTTTATAGC 59.120 40.000 0.00 0.00 0.00 2.97
2264 2619 5.957771 TCTGAGGTTGATGGTTTATAGCT 57.042 39.130 0.00 0.00 0.00 3.32
2265 2620 7.093068 TGTTCTGAGGTTGATGGTTTATAGCTA 60.093 37.037 0.00 0.00 0.00 3.32
2266 2621 7.618019 TCTGAGGTTGATGGTTTATAGCTAT 57.382 36.000 11.77 11.77 0.00 2.97
2267 2622 7.445121 TCTGAGGTTGATGGTTTATAGCTATG 58.555 38.462 16.77 0.00 0.00 2.23
2268 2623 5.997746 TGAGGTTGATGGTTTATAGCTATGC 59.002 40.000 16.77 6.39 0.00 3.14
2269 2624 6.183361 TGAGGTTGATGGTTTATAGCTATGCT 60.183 38.462 16.77 0.00 43.41 3.79
2270 2625 6.234177 AGGTTGATGGTTTATAGCTATGCTC 58.766 40.000 16.77 6.00 40.44 4.26
2271 2626 5.120830 GGTTGATGGTTTATAGCTATGCTCG 59.879 44.000 16.77 0.00 40.44 5.03
2272 2627 4.245660 TGATGGTTTATAGCTATGCTCGC 58.754 43.478 16.77 2.36 40.44 5.03
2273 2628 3.040147 TGGTTTATAGCTATGCTCGCC 57.960 47.619 16.77 11.04 40.44 5.54
2274 2629 2.367241 TGGTTTATAGCTATGCTCGCCA 59.633 45.455 16.77 13.22 40.44 5.69
2275 2630 3.007940 TGGTTTATAGCTATGCTCGCCAT 59.992 43.478 16.77 0.00 40.44 4.40
2276 2631 3.372206 GGTTTATAGCTATGCTCGCCATG 59.628 47.826 16.77 0.00 40.44 3.66
2277 2632 2.967599 TATAGCTATGCTCGCCATGG 57.032 50.000 16.77 7.63 40.44 3.66
2278 2633 0.251354 ATAGCTATGCTCGCCATGGG 59.749 55.000 15.13 3.69 40.44 4.00
2279 2634 2.454832 TAGCTATGCTCGCCATGGGC 62.455 60.000 15.13 9.32 42.02 5.36
2296 2651 1.826385 GGCACCTATGTTCTGTTGCT 58.174 50.000 0.00 0.00 0.00 3.91
2297 2652 1.470098 GGCACCTATGTTCTGTTGCTG 59.530 52.381 0.00 0.00 0.00 4.41
2298 2653 2.426522 GCACCTATGTTCTGTTGCTGA 58.573 47.619 0.00 0.00 0.00 4.26
2299 2654 2.417933 GCACCTATGTTCTGTTGCTGAG 59.582 50.000 0.00 0.00 0.00 3.35
2300 2655 2.417933 CACCTATGTTCTGTTGCTGAGC 59.582 50.000 0.00 0.00 0.00 4.26
2301 2656 2.038952 ACCTATGTTCTGTTGCTGAGCA 59.961 45.455 1.40 1.40 36.47 4.26
2302 2657 3.076621 CCTATGTTCTGTTGCTGAGCAA 58.923 45.455 17.04 17.04 46.80 3.91
2316 2671 6.915544 TGCTGAGCAATAAGAGTCTATTTG 57.084 37.500 3.81 9.55 34.76 2.32
2317 2672 6.643388 TGCTGAGCAATAAGAGTCTATTTGA 58.357 36.000 3.81 0.00 34.76 2.69
2318 2673 7.278135 TGCTGAGCAATAAGAGTCTATTTGAT 58.722 34.615 3.81 10.95 34.76 2.57
2319 2674 8.424133 TGCTGAGCAATAAGAGTCTATTTGATA 58.576 33.333 3.81 0.00 34.76 2.15
2320 2675 9.434420 GCTGAGCAATAAGAGTCTATTTGATAT 57.566 33.333 15.62 0.00 0.00 1.63
2329 2684 6.952743 AGAGTCTATTTGATATTTTGCAGCG 58.047 36.000 0.00 0.00 0.00 5.18
2330 2685 6.763135 AGAGTCTATTTGATATTTTGCAGCGA 59.237 34.615 0.00 0.00 0.00 4.93
2331 2686 7.443575 AGAGTCTATTTGATATTTTGCAGCGAT 59.556 33.333 0.00 0.00 0.00 4.58
2332 2687 7.934457 AGTCTATTTGATATTTTGCAGCGATT 58.066 30.769 0.00 0.00 0.00 3.34
2333 2688 9.056005 AGTCTATTTGATATTTTGCAGCGATTA 57.944 29.630 0.00 0.00 0.00 1.75
2334 2689 9.107367 GTCTATTTGATATTTTGCAGCGATTAC 57.893 33.333 0.00 0.00 0.00 1.89
2335 2690 8.835439 TCTATTTGATATTTTGCAGCGATTACA 58.165 29.630 0.00 0.00 0.00 2.41
2336 2691 7.919313 ATTTGATATTTTGCAGCGATTACAG 57.081 32.000 0.00 0.00 0.00 2.74
2337 2692 6.435430 TTGATATTTTGCAGCGATTACAGT 57.565 33.333 0.00 0.00 0.00 3.55
2338 2693 6.435430 TGATATTTTGCAGCGATTACAGTT 57.565 33.333 0.00 0.00 0.00 3.16
2339 2694 6.257423 TGATATTTTGCAGCGATTACAGTTG 58.743 36.000 0.00 0.00 0.00 3.16
2340 2695 3.980646 TTTTGCAGCGATTACAGTTGT 57.019 38.095 0.00 0.00 0.00 3.32
2341 2696 2.967459 TTGCAGCGATTACAGTTGTG 57.033 45.000 0.00 0.00 0.00 3.33
2342 2697 1.155889 TGCAGCGATTACAGTTGTGG 58.844 50.000 0.00 0.00 0.00 4.17
2343 2698 1.270571 TGCAGCGATTACAGTTGTGGA 60.271 47.619 0.00 0.00 0.00 4.02
2344 2699 1.804151 GCAGCGATTACAGTTGTGGAA 59.196 47.619 0.00 0.00 0.00 3.53
2345 2700 2.412847 GCAGCGATTACAGTTGTGGAAC 60.413 50.000 0.00 0.00 37.35 3.62
2357 2712 2.928801 TGTGGAACATGTACTGCAGT 57.071 45.000 25.12 25.12 45.67 4.40
2359 2714 4.551702 TGTGGAACATGTACTGCAGTAT 57.448 40.909 28.37 13.02 45.67 2.12
2360 2715 4.905429 TGTGGAACATGTACTGCAGTATT 58.095 39.130 28.37 18.57 45.67 1.89
2361 2716 5.312895 TGTGGAACATGTACTGCAGTATTT 58.687 37.500 28.37 18.36 45.67 1.40
2362 2717 6.468543 TGTGGAACATGTACTGCAGTATTTA 58.531 36.000 28.37 18.04 45.67 1.40
2363 2718 6.593770 TGTGGAACATGTACTGCAGTATTTAG 59.406 38.462 28.37 19.71 45.67 1.85
2364 2719 6.594159 GTGGAACATGTACTGCAGTATTTAGT 59.406 38.462 28.37 20.28 44.52 2.24
2365 2720 7.762615 GTGGAACATGTACTGCAGTATTTAGTA 59.237 37.037 28.37 11.89 44.52 1.82
2366 2721 8.315482 TGGAACATGTACTGCAGTATTTAGTAA 58.685 33.333 28.37 3.51 32.54 2.24
2367 2722 8.818057 GGAACATGTACTGCAGTATTTAGTAAG 58.182 37.037 28.37 14.68 32.54 2.34
2368 2723 9.582431 GAACATGTACTGCAGTATTTAGTAAGA 57.418 33.333 28.37 5.57 32.54 2.10
2369 2724 9.938280 AACATGTACTGCAGTATTTAGTAAGAA 57.062 29.630 28.37 1.33 32.54 2.52
2373 2728 9.938280 TGTACTGCAGTATTTAGTAAGAATGTT 57.062 29.630 28.37 0.00 32.54 2.71
2378 2733 9.719355 TGCAGTATTTAGTAAGAATGTTCTTCA 57.281 29.630 11.02 0.00 43.72 3.02
2388 2743 9.381033 AGTAAGAATGTTCTTCAGATTGATGAG 57.619 33.333 11.02 0.00 43.72 2.90
2389 2744 7.627298 AAGAATGTTCTTCAGATTGATGAGG 57.373 36.000 2.25 0.00 43.72 3.86
2390 2745 6.955364 AGAATGTTCTTCAGATTGATGAGGA 58.045 36.000 0.00 0.00 33.06 3.71
2391 2746 7.575505 AGAATGTTCTTCAGATTGATGAGGAT 58.424 34.615 0.00 0.00 35.50 3.24
2392 2747 8.712103 AGAATGTTCTTCAGATTGATGAGGATA 58.288 33.333 0.00 0.00 35.50 2.59
2393 2748 9.334947 GAATGTTCTTCAGATTGATGAGGATAA 57.665 33.333 0.00 0.00 35.50 1.75
2394 2749 8.905660 ATGTTCTTCAGATTGATGAGGATAAG 57.094 34.615 0.00 0.00 35.50 1.73
2395 2750 8.082672 TGTTCTTCAGATTGATGAGGATAAGA 57.917 34.615 0.00 0.00 35.50 2.10
2396 2751 8.202811 TGTTCTTCAGATTGATGAGGATAAGAG 58.797 37.037 0.00 0.00 35.50 2.85
2397 2752 7.911130 TCTTCAGATTGATGAGGATAAGAGT 57.089 36.000 0.00 0.00 31.07 3.24
2398 2753 7.724287 TCTTCAGATTGATGAGGATAAGAGTG 58.276 38.462 0.00 0.00 31.07 3.51
2399 2754 5.851720 TCAGATTGATGAGGATAAGAGTGC 58.148 41.667 0.00 0.00 0.00 4.40
2400 2755 5.364735 TCAGATTGATGAGGATAAGAGTGCA 59.635 40.000 0.00 0.00 0.00 4.57
2401 2756 6.042897 TCAGATTGATGAGGATAAGAGTGCAT 59.957 38.462 0.00 0.00 0.00 3.96
2402 2757 6.711194 CAGATTGATGAGGATAAGAGTGCATT 59.289 38.462 0.00 0.00 0.00 3.56
2403 2758 6.711194 AGATTGATGAGGATAAGAGTGCATTG 59.289 38.462 0.00 0.00 0.00 2.82
2404 2759 5.363562 TGATGAGGATAAGAGTGCATTGT 57.636 39.130 0.00 0.00 0.00 2.71
2405 2760 5.121105 TGATGAGGATAAGAGTGCATTGTG 58.879 41.667 0.00 0.00 0.00 3.33
2406 2761 3.877559 TGAGGATAAGAGTGCATTGTGG 58.122 45.455 0.00 0.00 0.00 4.17
2407 2762 3.519107 TGAGGATAAGAGTGCATTGTGGA 59.481 43.478 0.00 0.00 0.00 4.02
2408 2763 4.164796 TGAGGATAAGAGTGCATTGTGGAT 59.835 41.667 0.00 0.00 0.00 3.41
2409 2764 5.121380 AGGATAAGAGTGCATTGTGGATT 57.879 39.130 0.00 0.00 0.00 3.01
2410 2765 6.126796 TGAGGATAAGAGTGCATTGTGGATTA 60.127 38.462 0.00 0.00 0.00 1.75
2411 2766 6.058183 AGGATAAGAGTGCATTGTGGATTAC 58.942 40.000 0.00 0.00 0.00 1.89
2412 2767 6.058183 GGATAAGAGTGCATTGTGGATTACT 58.942 40.000 0.00 0.00 0.00 2.24
2413 2768 6.203723 GGATAAGAGTGCATTGTGGATTACTC 59.796 42.308 0.00 0.00 35.88 2.59
2414 2769 4.558226 AGAGTGCATTGTGGATTACTCA 57.442 40.909 0.00 0.00 37.57 3.41
2415 2770 5.108187 AGAGTGCATTGTGGATTACTCAT 57.892 39.130 0.00 0.00 37.57 2.90
2416 2771 5.503927 AGAGTGCATTGTGGATTACTCATT 58.496 37.500 0.00 0.00 37.57 2.57
2417 2772 5.356190 AGAGTGCATTGTGGATTACTCATTG 59.644 40.000 0.00 0.00 37.57 2.82
2418 2773 5.012239 AGTGCATTGTGGATTACTCATTGT 58.988 37.500 0.00 0.00 0.00 2.71
2419 2774 5.097529 GTGCATTGTGGATTACTCATTGTG 58.902 41.667 0.00 0.00 0.00 3.33
2420 2775 4.766373 TGCATTGTGGATTACTCATTGTGT 59.234 37.500 0.00 0.00 0.00 3.72
2421 2776 5.106197 TGCATTGTGGATTACTCATTGTGTC 60.106 40.000 0.00 0.00 0.00 3.67
2422 2777 5.124457 GCATTGTGGATTACTCATTGTGTCT 59.876 40.000 0.00 0.00 0.00 3.41
2423 2778 6.349611 GCATTGTGGATTACTCATTGTGTCTT 60.350 38.462 0.00 0.00 0.00 3.01
2424 2779 6.801539 TTGTGGATTACTCATTGTGTCTTC 57.198 37.500 0.00 0.00 0.00 2.87
2425 2780 6.114187 TGTGGATTACTCATTGTGTCTTCT 57.886 37.500 0.00 0.00 0.00 2.85
2426 2781 5.934043 TGTGGATTACTCATTGTGTCTTCTG 59.066 40.000 0.00 0.00 0.00 3.02
2427 2782 6.166279 GTGGATTACTCATTGTGTCTTCTGA 58.834 40.000 0.00 0.00 0.00 3.27
2428 2783 6.820656 GTGGATTACTCATTGTGTCTTCTGAT 59.179 38.462 0.00 0.00 0.00 2.90
2429 2784 7.981789 GTGGATTACTCATTGTGTCTTCTGATA 59.018 37.037 0.00 0.00 0.00 2.15
2430 2785 8.708378 TGGATTACTCATTGTGTCTTCTGATAT 58.292 33.333 0.00 0.00 0.00 1.63
2431 2786 9.553064 GGATTACTCATTGTGTCTTCTGATATT 57.447 33.333 0.00 0.00 0.00 1.28
2433 2788 9.896645 ATTACTCATTGTGTCTTCTGATATTGT 57.103 29.630 0.00 0.00 0.00 2.71
2434 2789 9.725019 TTACTCATTGTGTCTTCTGATATTGTT 57.275 29.630 0.00 0.00 0.00 2.83
2435 2790 8.627208 ACTCATTGTGTCTTCTGATATTGTTT 57.373 30.769 0.00 0.00 0.00 2.83
2436 2791 8.509690 ACTCATTGTGTCTTCTGATATTGTTTG 58.490 33.333 0.00 0.00 0.00 2.93
2437 2792 8.394971 TCATTGTGTCTTCTGATATTGTTTGT 57.605 30.769 0.00 0.00 0.00 2.83
2438 2793 8.291740 TCATTGTGTCTTCTGATATTGTTTGTG 58.708 33.333 0.00 0.00 0.00 3.33
2439 2794 6.558771 TGTGTCTTCTGATATTGTTTGTGG 57.441 37.500 0.00 0.00 0.00 4.17
2440 2795 5.473162 TGTGTCTTCTGATATTGTTTGTGGG 59.527 40.000 0.00 0.00 0.00 4.61
2441 2796 5.009631 TGTCTTCTGATATTGTTTGTGGGG 58.990 41.667 0.00 0.00 0.00 4.96
2442 2797 4.016444 TCTTCTGATATTGTTTGTGGGGC 58.984 43.478 0.00 0.00 0.00 5.80
2443 2798 3.737559 TCTGATATTGTTTGTGGGGCT 57.262 42.857 0.00 0.00 0.00 5.19
2444 2799 4.046286 TCTGATATTGTTTGTGGGGCTT 57.954 40.909 0.00 0.00 0.00 4.35
2445 2800 4.016444 TCTGATATTGTTTGTGGGGCTTC 58.984 43.478 0.00 0.00 0.00 3.86
2446 2801 3.763360 CTGATATTGTTTGTGGGGCTTCA 59.237 43.478 0.00 0.00 0.00 3.02
2447 2802 3.763360 TGATATTGTTTGTGGGGCTTCAG 59.237 43.478 0.00 0.00 0.00 3.02
2448 2803 2.380064 ATTGTTTGTGGGGCTTCAGA 57.620 45.000 0.00 0.00 0.00 3.27
2449 2804 2.151502 TTGTTTGTGGGGCTTCAGAA 57.848 45.000 0.00 0.00 0.00 3.02
2450 2805 2.380064 TGTTTGTGGGGCTTCAGAAT 57.620 45.000 0.00 0.00 0.00 2.40
2451 2806 2.676748 TGTTTGTGGGGCTTCAGAATT 58.323 42.857 0.00 0.00 0.00 2.17
2452 2807 3.037549 TGTTTGTGGGGCTTCAGAATTT 58.962 40.909 0.00 0.00 0.00 1.82
2453 2808 3.069443 TGTTTGTGGGGCTTCAGAATTTC 59.931 43.478 0.00 0.00 0.00 2.17
2454 2809 2.673775 TGTGGGGCTTCAGAATTTCA 57.326 45.000 0.00 0.00 0.00 2.69
2455 2810 3.173953 TGTGGGGCTTCAGAATTTCAT 57.826 42.857 0.00 0.00 0.00 2.57
2456 2811 2.827322 TGTGGGGCTTCAGAATTTCATG 59.173 45.455 0.00 0.00 0.00 3.07
2457 2812 3.091545 GTGGGGCTTCAGAATTTCATGA 58.908 45.455 0.00 0.00 0.00 3.07
2458 2813 3.511146 GTGGGGCTTCAGAATTTCATGAA 59.489 43.478 3.38 3.38 34.41 2.57
2466 2821 6.889301 TTCAGAATTTCATGAAGCTGTTCT 57.111 33.333 23.03 19.43 33.38 3.01
2467 2822 6.250344 TCAGAATTTCATGAAGCTGTTCTG 57.750 37.500 27.55 27.55 41.28 3.02
2468 2823 5.999600 TCAGAATTTCATGAAGCTGTTCTGA 59.000 36.000 29.52 29.52 44.36 3.27
2469 2824 6.148976 TCAGAATTTCATGAAGCTGTTCTGAG 59.851 38.462 29.52 18.53 42.77 3.35
2582 2938 2.158900 ACTCCGGCTGATCATTTCGAAT 60.159 45.455 0.00 0.00 0.00 3.34
2583 2939 3.069586 ACTCCGGCTGATCATTTCGAATA 59.930 43.478 0.00 0.00 0.00 1.75
2584 2940 4.248859 CTCCGGCTGATCATTTCGAATAT 58.751 43.478 0.00 0.00 0.00 1.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 9.031537 TGTCTACTTACTGGATAATCAGTTTCA 57.968 33.333 2.76 0.00 44.74 2.69
38 39 7.176515 TGGGAGTTGTAATACGTTGTCTACTTA 59.823 37.037 0.00 0.00 0.00 2.24
55 56 2.380064 TTTCTGGCATTGGGAGTTGT 57.620 45.000 0.00 0.00 0.00 3.32
126 127 8.769891 GTTAATTTTGGTCGATTTTTGTGGAAT 58.230 29.630 0.00 0.00 0.00 3.01
187 189 1.053835 TGGGTCTTCTGCAGGTGTCA 61.054 55.000 15.13 2.74 0.00 3.58
196 198 0.607489 CACAAGGGCTGGGTCTTCTG 60.607 60.000 0.00 0.00 0.00 3.02
212 214 0.318699 CTCGAACACGGAGAAGCACA 60.319 55.000 0.00 0.00 0.00 4.57
254 256 3.950395 GCTGATAAGATGCCCTTCTTGTT 59.050 43.478 6.67 0.00 36.63 2.83
255 257 3.549794 GCTGATAAGATGCCCTTCTTGT 58.450 45.455 6.67 0.99 36.63 3.16
336 341 4.514577 CGCCGCCGTCCTCTTCAT 62.515 66.667 0.00 0.00 0.00 2.57
449 516 2.249743 TGCCAAATCCCTAATTCCCCAT 59.750 45.455 0.00 0.00 0.00 4.00
612 696 4.631377 CGTGATTGTATGGTCACTGTTCAT 59.369 41.667 4.29 0.00 41.90 2.57
659 743 5.046878 TCACTGTACCTCAAAATACGACCAT 60.047 40.000 0.00 0.00 0.00 3.55
674 758 2.884639 AGCATGTTTTGGTCACTGTACC 59.115 45.455 0.00 0.00 40.19 3.34
738 822 6.576662 TGCAGGTAACGAAATGGAAATTTA 57.423 33.333 0.00 0.00 46.39 1.40
740 824 5.461032 TTGCAGGTAACGAAATGGAAATT 57.539 34.783 0.00 0.00 46.39 1.82
741 825 5.461032 TTTGCAGGTAACGAAATGGAAAT 57.539 34.783 0.00 0.00 46.39 2.17
743 827 4.920640 TTTTGCAGGTAACGAAATGGAA 57.079 36.364 0.00 0.00 46.39 3.53
744 828 4.920640 TTTTTGCAGGTAACGAAATGGA 57.079 36.364 0.00 0.00 46.39 3.41
765 849 8.725405 AATTGTTTTGTACGAAAGGGATTTTT 57.275 26.923 8.60 0.00 0.00 1.94
766 850 8.725405 AAATTGTTTTGTACGAAAGGGATTTT 57.275 26.923 8.60 3.19 0.00 1.82
767 851 7.168469 CGAAATTGTTTTGTACGAAAGGGATTT 59.832 33.333 8.60 13.53 0.00 2.17
768 852 6.639279 CGAAATTGTTTTGTACGAAAGGGATT 59.361 34.615 8.60 6.80 0.00 3.01
769 853 6.016943 TCGAAATTGTTTTGTACGAAAGGGAT 60.017 34.615 8.60 1.30 0.00 3.85
772 856 7.439204 TTTCGAAATTGTTTTGTACGAAAGG 57.561 32.000 6.47 0.00 41.09 3.11
807 891 3.296854 GTCCCTTGGGTGAGAACTTTTT 58.703 45.455 5.51 0.00 0.00 1.94
835 921 2.716017 GGAGCCGTGGACTCTGGAG 61.716 68.421 9.25 0.00 34.46 3.86
850 936 2.501223 TTTCTAGGCGGTGCGTGGAG 62.501 60.000 0.00 0.00 35.60 3.86
851 937 2.102109 TTTTCTAGGCGGTGCGTGGA 62.102 55.000 0.00 0.00 32.61 4.02
852 938 1.024579 ATTTTCTAGGCGGTGCGTGG 61.025 55.000 0.00 0.00 0.00 4.94
853 939 1.647346 TATTTTCTAGGCGGTGCGTG 58.353 50.000 0.00 0.00 0.00 5.34
854 940 2.480845 GATATTTTCTAGGCGGTGCGT 58.519 47.619 0.00 0.00 0.00 5.24
969 1056 0.253894 CGGTAGGGTTAGGGTTTGGG 59.746 60.000 0.00 0.00 0.00 4.12
1410 1509 3.470567 CAGTCGTCTTGGTCGCGC 61.471 66.667 0.00 0.00 0.00 6.86
1560 1662 2.373540 TTGCCTGTACGTATCGCTTT 57.626 45.000 0.00 0.00 0.00 3.51
1611 1713 4.724074 TGGCAACTGATTGATTTGATCC 57.276 40.909 0.00 0.00 38.15 3.36
1628 1730 4.869297 CGCAAAAATAATCCATTCTTGGCA 59.131 37.500 0.00 0.00 43.29 4.92
1728 1830 7.678837 TGTAAGAAAGCCAAAATCATCCATTT 58.321 30.769 0.00 0.00 36.12 2.32
1748 1851 2.419673 TGCTTGCATCCGACATTGTAAG 59.580 45.455 0.00 0.00 38.23 2.34
1765 1868 7.147915 ACCCGAAAAATGTATAACATCATGCTT 60.148 33.333 0.00 0.00 37.97 3.91
1806 1909 6.925610 TCGCTGCAAAATATCAAATACTCT 57.074 33.333 0.00 0.00 0.00 3.24
1807 1910 9.107367 GTAATCGCTGCAAAATATCAAATACTC 57.893 33.333 0.00 0.00 0.00 2.59
1808 1911 8.620416 TGTAATCGCTGCAAAATATCAAATACT 58.380 29.630 0.00 0.00 0.00 2.12
1809 1912 8.781067 TGTAATCGCTGCAAAATATCAAATAC 57.219 30.769 0.00 0.00 0.00 1.89
1810 1913 8.620416 ACTGTAATCGCTGCAAAATATCAAATA 58.380 29.630 0.00 0.00 0.00 1.40
1811 1914 7.483307 ACTGTAATCGCTGCAAAATATCAAAT 58.517 30.769 0.00 0.00 0.00 2.32
1812 1915 6.851609 ACTGTAATCGCTGCAAAATATCAAA 58.148 32.000 0.00 0.00 0.00 2.69
1813 1916 6.435430 ACTGTAATCGCTGCAAAATATCAA 57.565 33.333 0.00 0.00 0.00 2.57
1814 1917 6.128035 ACAACTGTAATCGCTGCAAAATATCA 60.128 34.615 0.00 0.00 0.00 2.15
1815 1918 6.195244 CACAACTGTAATCGCTGCAAAATATC 59.805 38.462 0.00 0.00 0.00 1.63
1816 1919 6.029607 CACAACTGTAATCGCTGCAAAATAT 58.970 36.000 0.00 0.00 0.00 1.28
1817 1920 5.180304 TCACAACTGTAATCGCTGCAAAATA 59.820 36.000 0.00 0.00 0.00 1.40
1818 1921 4.023279 TCACAACTGTAATCGCTGCAAAAT 60.023 37.500 0.00 0.00 0.00 1.82
1819 1922 3.313803 TCACAACTGTAATCGCTGCAAAA 59.686 39.130 0.00 0.00 0.00 2.44
1820 1923 2.875317 TCACAACTGTAATCGCTGCAAA 59.125 40.909 0.00 0.00 0.00 3.68
1821 1924 2.488952 TCACAACTGTAATCGCTGCAA 58.511 42.857 0.00 0.00 0.00 4.08
1822 1925 2.162319 TCACAACTGTAATCGCTGCA 57.838 45.000 0.00 0.00 0.00 4.41
1823 1926 3.226347 GTTTCACAACTGTAATCGCTGC 58.774 45.455 0.00 0.00 0.00 5.25
1824 1927 4.466567 TGTTTCACAACTGTAATCGCTG 57.533 40.909 0.00 0.00 33.58 5.18
1825 1928 4.515191 ACATGTTTCACAACTGTAATCGCT 59.485 37.500 0.00 0.00 33.58 4.93
1826 1929 4.783242 ACATGTTTCACAACTGTAATCGC 58.217 39.130 0.00 0.00 33.58 4.58
1827 1930 7.009440 CAGTACATGTTTCACAACTGTAATCG 58.991 38.462 2.30 0.00 32.60 3.34
1828 1931 6.797033 GCAGTACATGTTTCACAACTGTAATC 59.203 38.462 20.01 5.38 37.02 1.75
1829 1932 6.262049 TGCAGTACATGTTTCACAACTGTAAT 59.738 34.615 20.01 0.00 37.02 1.89
1830 1933 5.586643 TGCAGTACATGTTTCACAACTGTAA 59.413 36.000 20.01 10.21 37.02 2.41
1831 1934 5.119694 TGCAGTACATGTTTCACAACTGTA 58.880 37.500 20.01 15.27 37.02 2.74
1832 1935 3.944650 TGCAGTACATGTTTCACAACTGT 59.055 39.130 20.01 0.39 37.02 3.55
1833 1936 4.035558 ACTGCAGTACATGTTTCACAACTG 59.964 41.667 20.16 16.47 37.47 3.16
1834 1937 4.199310 ACTGCAGTACATGTTTCACAACT 58.801 39.130 20.16 0.00 33.58 3.16
1835 1938 4.552166 ACTGCAGTACATGTTTCACAAC 57.448 40.909 20.16 0.00 0.00 3.32
1836 1939 6.875948 AATACTGCAGTACATGTTTCACAA 57.124 33.333 28.28 4.02 32.72 3.33
1837 1940 6.875948 AAATACTGCAGTACATGTTTCACA 57.124 33.333 28.28 4.24 32.72 3.58
1838 1941 8.029642 ACTAAATACTGCAGTACATGTTTCAC 57.970 34.615 28.28 0.00 32.72 3.18
1839 1942 9.713713 TTACTAAATACTGCAGTACATGTTTCA 57.286 29.630 28.28 5.62 32.72 2.69
1841 1944 9.938280 TCTTACTAAATACTGCAGTACATGTTT 57.062 29.630 28.28 23.89 32.72 2.83
1842 1945 9.938280 TTCTTACTAAATACTGCAGTACATGTT 57.062 29.630 28.28 20.04 32.72 2.71
1846 1949 9.938280 AACATTCTTACTAAATACTGCAGTACA 57.062 29.630 28.28 15.22 32.72 2.90
1849 1952 9.155975 CTGAACATTCTTACTAAATACTGCAGT 57.844 33.333 25.12 25.12 0.00 4.40
1850 1953 9.155975 ACTGAACATTCTTACTAAATACTGCAG 57.844 33.333 13.48 13.48 0.00 4.41
1851 1954 9.502091 AACTGAACATTCTTACTAAATACTGCA 57.498 29.630 0.00 0.00 0.00 4.41
1859 1962 9.219603 CCTCATCAAACTGAACATTCTTACTAA 57.780 33.333 0.00 0.00 0.00 2.24
1860 1963 8.593679 TCCTCATCAAACTGAACATTCTTACTA 58.406 33.333 0.00 0.00 0.00 1.82
1861 1964 7.453393 TCCTCATCAAACTGAACATTCTTACT 58.547 34.615 0.00 0.00 0.00 2.24
1862 1965 7.672983 TCCTCATCAAACTGAACATTCTTAC 57.327 36.000 0.00 0.00 0.00 2.34
1863 1966 9.958180 TTATCCTCATCAAACTGAACATTCTTA 57.042 29.630 0.00 0.00 0.00 2.10
1864 1967 8.868522 TTATCCTCATCAAACTGAACATTCTT 57.131 30.769 0.00 0.00 0.00 2.52
1865 1968 8.324306 TCTTATCCTCATCAAACTGAACATTCT 58.676 33.333 0.00 0.00 0.00 2.40
1866 1969 8.498054 TCTTATCCTCATCAAACTGAACATTC 57.502 34.615 0.00 0.00 0.00 2.67
1867 1970 8.105829 ACTCTTATCCTCATCAAACTGAACATT 58.894 33.333 0.00 0.00 0.00 2.71
1868 1971 7.551974 CACTCTTATCCTCATCAAACTGAACAT 59.448 37.037 0.00 0.00 0.00 2.71
1869 1972 6.875726 CACTCTTATCCTCATCAAACTGAACA 59.124 38.462 0.00 0.00 0.00 3.18
1870 1973 6.183360 GCACTCTTATCCTCATCAAACTGAAC 60.183 42.308 0.00 0.00 0.00 3.18
1871 1974 5.877012 GCACTCTTATCCTCATCAAACTGAA 59.123 40.000 0.00 0.00 0.00 3.02
1872 1975 5.046376 TGCACTCTTATCCTCATCAAACTGA 60.046 40.000 0.00 0.00 0.00 3.41
1873 1976 5.181009 TGCACTCTTATCCTCATCAAACTG 58.819 41.667 0.00 0.00 0.00 3.16
1874 1977 5.426689 TGCACTCTTATCCTCATCAAACT 57.573 39.130 0.00 0.00 0.00 2.66
1875 1978 6.094603 ACAATGCACTCTTATCCTCATCAAAC 59.905 38.462 0.00 0.00 0.00 2.93
1876 1979 6.094464 CACAATGCACTCTTATCCTCATCAAA 59.906 38.462 0.00 0.00 0.00 2.69
1877 1980 5.587443 CACAATGCACTCTTATCCTCATCAA 59.413 40.000 0.00 0.00 0.00 2.57
1878 1981 5.121105 CACAATGCACTCTTATCCTCATCA 58.879 41.667 0.00 0.00 0.00 3.07
1879 1982 4.514441 CCACAATGCACTCTTATCCTCATC 59.486 45.833 0.00 0.00 0.00 2.92
1880 1983 4.164796 TCCACAATGCACTCTTATCCTCAT 59.835 41.667 0.00 0.00 0.00 2.90
1881 1984 3.519107 TCCACAATGCACTCTTATCCTCA 59.481 43.478 0.00 0.00 0.00 3.86
1882 1985 4.142609 TCCACAATGCACTCTTATCCTC 57.857 45.455 0.00 0.00 0.00 3.71
1883 1986 4.785346 ATCCACAATGCACTCTTATCCT 57.215 40.909 0.00 0.00 0.00 3.24
1884 1987 6.058183 AGTAATCCACAATGCACTCTTATCC 58.942 40.000 0.00 0.00 0.00 2.59
1885 1988 6.763135 TGAGTAATCCACAATGCACTCTTATC 59.237 38.462 0.00 0.00 33.98 1.75
1886 1989 6.653020 TGAGTAATCCACAATGCACTCTTAT 58.347 36.000 0.00 0.00 33.98 1.73
1887 1990 6.048732 TGAGTAATCCACAATGCACTCTTA 57.951 37.500 0.00 0.00 33.98 2.10
1888 1991 4.910195 TGAGTAATCCACAATGCACTCTT 58.090 39.130 0.00 0.00 33.98 2.85
1889 1992 4.511527 CTGAGTAATCCACAATGCACTCT 58.488 43.478 0.00 0.00 33.98 3.24
1890 1993 3.624861 CCTGAGTAATCCACAATGCACTC 59.375 47.826 0.00 0.00 33.67 3.51
1891 1994 3.009473 ACCTGAGTAATCCACAATGCACT 59.991 43.478 0.00 0.00 0.00 4.40
1892 1995 3.347216 ACCTGAGTAATCCACAATGCAC 58.653 45.455 0.00 0.00 0.00 4.57
1893 1996 3.719268 ACCTGAGTAATCCACAATGCA 57.281 42.857 0.00 0.00 0.00 3.96
1894 1997 5.048083 TGAAAACCTGAGTAATCCACAATGC 60.048 40.000 0.00 0.00 0.00 3.56
1895 1998 6.573664 TGAAAACCTGAGTAATCCACAATG 57.426 37.500 0.00 0.00 0.00 2.82
1896 1999 6.350445 GCATGAAAACCTGAGTAATCCACAAT 60.350 38.462 0.00 0.00 0.00 2.71
1897 2000 5.048083 GCATGAAAACCTGAGTAATCCACAA 60.048 40.000 0.00 0.00 0.00 3.33
1898 2001 4.458989 GCATGAAAACCTGAGTAATCCACA 59.541 41.667 0.00 0.00 0.00 4.17
1899 2002 4.142381 GGCATGAAAACCTGAGTAATCCAC 60.142 45.833 0.00 0.00 0.00 4.02
1900 2003 4.016444 GGCATGAAAACCTGAGTAATCCA 58.984 43.478 0.00 0.00 0.00 3.41
1901 2004 4.273318 AGGCATGAAAACCTGAGTAATCC 58.727 43.478 0.00 0.00 34.07 3.01
1910 2013 1.526575 CGGCACAGGCATGAAAACCT 61.527 55.000 4.84 0.00 43.71 3.50
1911 2014 1.080569 CGGCACAGGCATGAAAACC 60.081 57.895 4.84 0.00 43.71 3.27
1912 2015 0.664166 CACGGCACAGGCATGAAAAC 60.664 55.000 4.84 0.00 43.71 2.43
1913 2016 1.106351 ACACGGCACAGGCATGAAAA 61.106 50.000 4.84 0.00 43.71 2.29
1914 2017 1.528076 ACACGGCACAGGCATGAAA 60.528 52.632 4.84 0.00 43.71 2.69
1915 2018 2.112928 ACACGGCACAGGCATGAA 59.887 55.556 4.84 0.00 43.71 2.57
1916 2019 2.669229 CACACGGCACAGGCATGA 60.669 61.111 4.84 0.00 43.71 3.07
1917 2020 1.233950 TAACACACGGCACAGGCATG 61.234 55.000 0.00 0.00 43.71 4.06
1918 2021 0.536233 TTAACACACGGCACAGGCAT 60.536 50.000 0.00 0.00 43.71 4.40
1919 2022 0.536233 ATTAACACACGGCACAGGCA 60.536 50.000 0.00 0.00 43.71 4.75
1920 2023 0.596082 AATTAACACACGGCACAGGC 59.404 50.000 0.00 0.00 40.13 4.85
1921 2024 2.660490 CAAATTAACACACGGCACAGG 58.340 47.619 0.00 0.00 0.00 4.00
1922 2025 2.050691 GCAAATTAACACACGGCACAG 58.949 47.619 0.00 0.00 0.00 3.66
1923 2026 1.269309 GGCAAATTAACACACGGCACA 60.269 47.619 0.00 0.00 0.00 4.57
1924 2027 1.000717 AGGCAAATTAACACACGGCAC 60.001 47.619 0.00 0.00 0.00 5.01
1925 2028 1.000827 CAGGCAAATTAACACACGGCA 60.001 47.619 0.00 0.00 0.00 5.69
1926 2029 1.000717 ACAGGCAAATTAACACACGGC 60.001 47.619 0.00 0.00 0.00 5.68
1927 2030 2.552315 AGACAGGCAAATTAACACACGG 59.448 45.455 0.00 0.00 0.00 4.94
1928 2031 3.896648 AGACAGGCAAATTAACACACG 57.103 42.857 0.00 0.00 0.00 4.49
1929 2032 5.008613 TCAGAAGACAGGCAAATTAACACAC 59.991 40.000 0.00 0.00 0.00 3.82
1930 2033 5.129634 TCAGAAGACAGGCAAATTAACACA 58.870 37.500 0.00 0.00 0.00 3.72
1931 2034 5.689383 TCAGAAGACAGGCAAATTAACAC 57.311 39.130 0.00 0.00 0.00 3.32
1932 2035 5.769662 ACATCAGAAGACAGGCAAATTAACA 59.230 36.000 0.00 0.00 0.00 2.41
1933 2036 6.088824 CACATCAGAAGACAGGCAAATTAAC 58.911 40.000 0.00 0.00 0.00 2.01
1934 2037 5.183713 CCACATCAGAAGACAGGCAAATTAA 59.816 40.000 0.00 0.00 0.00 1.40
1935 2038 4.701651 CCACATCAGAAGACAGGCAAATTA 59.298 41.667 0.00 0.00 0.00 1.40
1936 2039 3.508793 CCACATCAGAAGACAGGCAAATT 59.491 43.478 0.00 0.00 0.00 1.82
1937 2040 3.087031 CCACATCAGAAGACAGGCAAAT 58.913 45.455 0.00 0.00 0.00 2.32
1938 2041 2.158623 ACCACATCAGAAGACAGGCAAA 60.159 45.455 0.00 0.00 0.00 3.68
1939 2042 1.421268 ACCACATCAGAAGACAGGCAA 59.579 47.619 0.00 0.00 0.00 4.52
1940 2043 1.059098 ACCACATCAGAAGACAGGCA 58.941 50.000 0.00 0.00 0.00 4.75
1941 2044 2.191128 AACCACATCAGAAGACAGGC 57.809 50.000 0.00 0.00 0.00 4.85
1942 2045 3.251729 CACAAACCACATCAGAAGACAGG 59.748 47.826 0.00 0.00 0.00 4.00
1943 2046 3.251729 CCACAAACCACATCAGAAGACAG 59.748 47.826 0.00 0.00 0.00 3.51
1944 2047 3.213506 CCACAAACCACATCAGAAGACA 58.786 45.455 0.00 0.00 0.00 3.41
1945 2048 2.554032 CCCACAAACCACATCAGAAGAC 59.446 50.000 0.00 0.00 0.00 3.01
1946 2049 2.488891 CCCCACAAACCACATCAGAAGA 60.489 50.000 0.00 0.00 0.00 2.87
1947 2050 1.888512 CCCCACAAACCACATCAGAAG 59.111 52.381 0.00 0.00 0.00 2.85
1948 2051 1.993956 CCCCACAAACCACATCAGAA 58.006 50.000 0.00 0.00 0.00 3.02
1949 2052 0.539438 GCCCCACAAACCACATCAGA 60.539 55.000 0.00 0.00 0.00 3.27
1950 2053 0.540365 AGCCCCACAAACCACATCAG 60.540 55.000 0.00 0.00 0.00 2.90
1951 2054 0.105760 AAGCCCCACAAACCACATCA 60.106 50.000 0.00 0.00 0.00 3.07
1952 2055 0.603065 GAAGCCCCACAAACCACATC 59.397 55.000 0.00 0.00 0.00 3.06
1953 2056 0.105760 TGAAGCCCCACAAACCACAT 60.106 50.000 0.00 0.00 0.00 3.21
1954 2057 0.754957 CTGAAGCCCCACAAACCACA 60.755 55.000 0.00 0.00 0.00 4.17
1955 2058 0.467290 TCTGAAGCCCCACAAACCAC 60.467 55.000 0.00 0.00 0.00 4.16
1956 2059 0.260230 TTCTGAAGCCCCACAAACCA 59.740 50.000 0.00 0.00 0.00 3.67
1957 2060 1.632589 ATTCTGAAGCCCCACAAACC 58.367 50.000 0.00 0.00 0.00 3.27
1958 2061 3.751479 AAATTCTGAAGCCCCACAAAC 57.249 42.857 0.00 0.00 0.00 2.93
1959 2062 5.541868 TCATAAAATTCTGAAGCCCCACAAA 59.458 36.000 0.00 0.00 0.00 2.83
1960 2063 5.083122 TCATAAAATTCTGAAGCCCCACAA 58.917 37.500 0.00 0.00 0.00 3.33
1961 2064 4.671831 TCATAAAATTCTGAAGCCCCACA 58.328 39.130 0.00 0.00 0.00 4.17
1962 2065 5.654497 CTTCATAAAATTCTGAAGCCCCAC 58.346 41.667 7.93 0.00 41.20 4.61
1963 2066 5.920193 CTTCATAAAATTCTGAAGCCCCA 57.080 39.130 7.93 0.00 41.20 4.96
1968 2071 8.509690 TCAGAACAGCTTCATAAAATTCTGAAG 58.490 33.333 13.82 13.82 44.50 3.02
1969 2072 8.394971 TCAGAACAGCTTCATAAAATTCTGAA 57.605 30.769 10.48 0.00 44.50 3.02
1970 2073 7.120285 CCTCAGAACAGCTTCATAAAATTCTGA 59.880 37.037 11.93 11.93 44.98 3.27
1971 2074 7.094463 ACCTCAGAACAGCTTCATAAAATTCTG 60.094 37.037 5.00 5.00 41.78 3.02
1972 2075 6.944862 ACCTCAGAACAGCTTCATAAAATTCT 59.055 34.615 0.00 0.00 0.00 2.40
1973 2076 7.150783 ACCTCAGAACAGCTTCATAAAATTC 57.849 36.000 0.00 0.00 0.00 2.17
1974 2077 7.231317 TCAACCTCAGAACAGCTTCATAAAATT 59.769 33.333 0.00 0.00 0.00 1.82
1975 2078 6.716628 TCAACCTCAGAACAGCTTCATAAAAT 59.283 34.615 0.00 0.00 0.00 1.82
1976 2079 6.061441 TCAACCTCAGAACAGCTTCATAAAA 58.939 36.000 0.00 0.00 0.00 1.52
1977 2080 5.620206 TCAACCTCAGAACAGCTTCATAAA 58.380 37.500 0.00 0.00 0.00 1.40
1978 2081 5.227569 TCAACCTCAGAACAGCTTCATAA 57.772 39.130 0.00 0.00 0.00 1.90
1979 2082 4.890158 TCAACCTCAGAACAGCTTCATA 57.110 40.909 0.00 0.00 0.00 2.15
1980 2083 3.777106 TCAACCTCAGAACAGCTTCAT 57.223 42.857 0.00 0.00 0.00 2.57
1981 2084 3.405831 CATCAACCTCAGAACAGCTTCA 58.594 45.455 0.00 0.00 0.00 3.02
1982 2085 2.746362 CCATCAACCTCAGAACAGCTTC 59.254 50.000 0.00 0.00 0.00 3.86
1983 2086 2.107204 ACCATCAACCTCAGAACAGCTT 59.893 45.455 0.00 0.00 0.00 3.74
1984 2087 1.701847 ACCATCAACCTCAGAACAGCT 59.298 47.619 0.00 0.00 0.00 4.24
1985 2088 2.191128 ACCATCAACCTCAGAACAGC 57.809 50.000 0.00 0.00 0.00 4.40
1986 2089 6.037610 GCTATAAACCATCAACCTCAGAACAG 59.962 42.308 0.00 0.00 0.00 3.16
1987 2090 5.880332 GCTATAAACCATCAACCTCAGAACA 59.120 40.000 0.00 0.00 0.00 3.18
1988 2091 6.116126 AGCTATAAACCATCAACCTCAGAAC 58.884 40.000 0.00 0.00 0.00 3.01
1989 2092 6.313519 AGCTATAAACCATCAACCTCAGAA 57.686 37.500 0.00 0.00 0.00 3.02
1990 2093 5.957771 AGCTATAAACCATCAACCTCAGA 57.042 39.130 0.00 0.00 0.00 3.27
1991 2094 6.148480 GCATAGCTATAAACCATCAACCTCAG 59.852 42.308 5.77 0.00 0.00 3.35
1992 2095 5.997746 GCATAGCTATAAACCATCAACCTCA 59.002 40.000 5.77 0.00 0.00 3.86
1993 2096 6.234177 AGCATAGCTATAAACCATCAACCTC 58.766 40.000 5.77 0.00 36.99 3.85
1994 2097 6.192970 AGCATAGCTATAAACCATCAACCT 57.807 37.500 5.77 0.00 36.99 3.50
1995 2098 5.120830 CGAGCATAGCTATAAACCATCAACC 59.879 44.000 5.77 0.00 39.88 3.77
1996 2099 5.389935 GCGAGCATAGCTATAAACCATCAAC 60.390 44.000 5.77 0.00 39.88 3.18
1997 2100 4.690748 GCGAGCATAGCTATAAACCATCAA 59.309 41.667 5.77 0.00 39.88 2.57
1998 2101 4.245660 GCGAGCATAGCTATAAACCATCA 58.754 43.478 5.77 0.00 39.88 3.07
1999 2102 3.619038 GGCGAGCATAGCTATAAACCATC 59.381 47.826 5.77 0.00 39.88 3.51
2000 2103 3.007940 TGGCGAGCATAGCTATAAACCAT 59.992 43.478 5.77 0.00 39.88 3.55
2001 2104 2.367241 TGGCGAGCATAGCTATAAACCA 59.633 45.455 5.77 7.39 39.88 3.67
2002 2105 3.040147 TGGCGAGCATAGCTATAAACC 57.960 47.619 5.77 4.89 39.88 3.27
2003 2106 3.372206 CCATGGCGAGCATAGCTATAAAC 59.628 47.826 5.77 0.00 35.42 2.01
2004 2107 3.599343 CCATGGCGAGCATAGCTATAAA 58.401 45.455 5.77 0.00 35.42 1.40
2005 2108 2.093500 CCCATGGCGAGCATAGCTATAA 60.093 50.000 6.09 0.00 35.42 0.98
2006 2109 1.482182 CCCATGGCGAGCATAGCTATA 59.518 52.381 6.09 0.00 35.42 1.31
2007 2110 0.251354 CCCATGGCGAGCATAGCTAT 59.749 55.000 6.09 0.00 38.67 2.97
2008 2111 1.673477 CCCATGGCGAGCATAGCTA 59.327 57.895 6.09 0.00 39.88 3.32
2009 2112 2.429058 CCCATGGCGAGCATAGCT 59.571 61.111 6.09 0.00 43.88 3.32
2010 2113 3.360340 GCCCATGGCGAGCATAGC 61.360 66.667 6.09 0.00 39.62 2.97
2020 2123 1.064463 ACAGAACATAGGTGCCCATGG 60.064 52.381 4.14 4.14 0.00 3.66
2021 2124 2.424601 CAACAGAACATAGGTGCCCATG 59.575 50.000 0.00 0.00 0.00 3.66
2022 2125 2.726821 CAACAGAACATAGGTGCCCAT 58.273 47.619 0.00 0.00 0.00 4.00
2023 2126 1.886222 GCAACAGAACATAGGTGCCCA 60.886 52.381 0.00 0.00 0.00 5.36
2024 2127 0.811281 GCAACAGAACATAGGTGCCC 59.189 55.000 0.00 0.00 0.00 5.36
2025 2128 1.470098 CAGCAACAGAACATAGGTGCC 59.530 52.381 0.00 0.00 0.00 5.01
2026 2129 2.417933 CTCAGCAACAGAACATAGGTGC 59.582 50.000 0.00 0.00 0.00 5.01
2027 2130 2.417933 GCTCAGCAACAGAACATAGGTG 59.582 50.000 0.00 0.00 0.00 4.00
2028 2131 2.038952 TGCTCAGCAACAGAACATAGGT 59.961 45.455 0.00 0.00 34.76 3.08
2029 2132 2.703416 TGCTCAGCAACAGAACATAGG 58.297 47.619 0.00 0.00 34.76 2.57
2041 2144 6.643388 TCAAATAGACTCTTATTGCTCAGCA 58.357 36.000 0.00 0.00 36.47 4.41
2042 2145 7.727331 ATCAAATAGACTCTTATTGCTCAGC 57.273 36.000 0.00 0.00 0.00 4.26
2051 2154 8.551205 CGCTGCAAAATATCAAATAGACTCTTA 58.449 33.333 0.00 0.00 0.00 2.10
2052 2155 7.280876 TCGCTGCAAAATATCAAATAGACTCTT 59.719 33.333 0.00 0.00 0.00 2.85
2133 2236 3.519107 TCCACAATGCACTCTTATCCTCA 59.481 43.478 0.00 0.00 0.00 3.86
2181 2536 5.769662 TCAGAAGACAGGCAAATTAACACAT 59.230 36.000 0.00 0.00 0.00 3.21
2188 2543 5.513233 ACCATATCAGAAGACAGGCAAATT 58.487 37.500 0.00 0.00 0.00 1.82
2207 2562 0.482446 TCTGAAGCCCCACAAACCAT 59.518 50.000 0.00 0.00 0.00 3.55
2231 2586 3.405831 TCAACCTCAGAACAGCTTCATG 58.594 45.455 0.00 0.00 0.00 3.07
2248 2603 5.389935 GCGAGCATAGCTATAAACCATCAAC 60.390 44.000 5.77 0.00 39.88 3.18
2249 2604 4.690748 GCGAGCATAGCTATAAACCATCAA 59.309 41.667 5.77 0.00 39.88 2.57
2250 2605 4.245660 GCGAGCATAGCTATAAACCATCA 58.754 43.478 5.77 0.00 39.88 3.07
2251 2606 3.619038 GGCGAGCATAGCTATAAACCATC 59.381 47.826 5.77 0.00 39.88 3.51
2252 2607 3.007940 TGGCGAGCATAGCTATAAACCAT 59.992 43.478 5.77 0.00 39.88 3.55
2253 2608 2.367241 TGGCGAGCATAGCTATAAACCA 59.633 45.455 5.77 7.39 39.88 3.67
2254 2609 3.040147 TGGCGAGCATAGCTATAAACC 57.960 47.619 5.77 4.89 39.88 3.27
2255 2610 3.372206 CCATGGCGAGCATAGCTATAAAC 59.628 47.826 5.77 0.00 35.42 2.01
2256 2611 3.599343 CCATGGCGAGCATAGCTATAAA 58.401 45.455 5.77 0.00 35.42 1.40
2257 2612 2.093500 CCCATGGCGAGCATAGCTATAA 60.093 50.000 6.09 0.00 35.42 0.98
2258 2613 1.482182 CCCATGGCGAGCATAGCTATA 59.518 52.381 6.09 0.00 35.42 1.31
2259 2614 0.251354 CCCATGGCGAGCATAGCTAT 59.749 55.000 6.09 0.00 38.67 2.97
2260 2615 1.673477 CCCATGGCGAGCATAGCTA 59.327 57.895 6.09 0.00 39.88 3.32
2261 2616 2.429058 CCCATGGCGAGCATAGCT 59.571 61.111 6.09 0.00 43.88 3.32
2262 2617 3.360340 GCCCATGGCGAGCATAGC 61.360 66.667 6.09 0.00 39.62 2.97
2272 2627 1.064463 ACAGAACATAGGTGCCCATGG 60.064 52.381 4.14 4.14 0.00 3.66
2273 2628 2.424601 CAACAGAACATAGGTGCCCATG 59.575 50.000 0.00 0.00 0.00 3.66
2274 2629 2.726821 CAACAGAACATAGGTGCCCAT 58.273 47.619 0.00 0.00 0.00 4.00
2275 2630 1.886222 GCAACAGAACATAGGTGCCCA 60.886 52.381 0.00 0.00 0.00 5.36
2276 2631 0.811281 GCAACAGAACATAGGTGCCC 59.189 55.000 0.00 0.00 0.00 5.36
2277 2632 1.470098 CAGCAACAGAACATAGGTGCC 59.530 52.381 0.00 0.00 0.00 5.01
2278 2633 2.417933 CTCAGCAACAGAACATAGGTGC 59.582 50.000 0.00 0.00 0.00 5.01
2279 2634 2.417933 GCTCAGCAACAGAACATAGGTG 59.582 50.000 0.00 0.00 0.00 4.00
2280 2635 2.038952 TGCTCAGCAACAGAACATAGGT 59.961 45.455 0.00 0.00 34.76 3.08
2281 2636 2.703416 TGCTCAGCAACAGAACATAGG 58.297 47.619 0.00 0.00 34.76 2.57
2293 2648 6.643388 TCAAATAGACTCTTATTGCTCAGCA 58.357 36.000 0.00 0.00 36.47 4.41
2294 2649 7.727331 ATCAAATAGACTCTTATTGCTCAGC 57.273 36.000 0.00 0.00 0.00 4.26
2303 2658 8.551205 CGCTGCAAAATATCAAATAGACTCTTA 58.449 33.333 0.00 0.00 0.00 2.10
2304 2659 7.280876 TCGCTGCAAAATATCAAATAGACTCTT 59.719 33.333 0.00 0.00 0.00 2.85
2305 2660 6.763135 TCGCTGCAAAATATCAAATAGACTCT 59.237 34.615 0.00 0.00 0.00 3.24
2306 2661 6.948353 TCGCTGCAAAATATCAAATAGACTC 58.052 36.000 0.00 0.00 0.00 3.36
2307 2662 6.925610 TCGCTGCAAAATATCAAATAGACT 57.074 33.333 0.00 0.00 0.00 3.24
2308 2663 9.107367 GTAATCGCTGCAAAATATCAAATAGAC 57.893 33.333 0.00 0.00 0.00 2.59
2309 2664 8.835439 TGTAATCGCTGCAAAATATCAAATAGA 58.165 29.630 0.00 0.00 0.00 1.98
2310 2665 9.110617 CTGTAATCGCTGCAAAATATCAAATAG 57.889 33.333 0.00 0.00 0.00 1.73
2311 2666 8.620416 ACTGTAATCGCTGCAAAATATCAAATA 58.380 29.630 0.00 0.00 0.00 1.40
2312 2667 7.483307 ACTGTAATCGCTGCAAAATATCAAAT 58.517 30.769 0.00 0.00 0.00 2.32
2313 2668 6.851609 ACTGTAATCGCTGCAAAATATCAAA 58.148 32.000 0.00 0.00 0.00 2.69
2314 2669 6.435430 ACTGTAATCGCTGCAAAATATCAA 57.565 33.333 0.00 0.00 0.00 2.57
2315 2670 6.128035 ACAACTGTAATCGCTGCAAAATATCA 60.128 34.615 0.00 0.00 0.00 2.15
2316 2671 6.195244 CACAACTGTAATCGCTGCAAAATATC 59.805 38.462 0.00 0.00 0.00 1.63
2317 2672 6.029607 CACAACTGTAATCGCTGCAAAATAT 58.970 36.000 0.00 0.00 0.00 1.28
2318 2673 5.389778 CACAACTGTAATCGCTGCAAAATA 58.610 37.500 0.00 0.00 0.00 1.40
2319 2674 4.229096 CACAACTGTAATCGCTGCAAAAT 58.771 39.130 0.00 0.00 0.00 1.82
2320 2675 3.549827 CCACAACTGTAATCGCTGCAAAA 60.550 43.478 0.00 0.00 0.00 2.44
2321 2676 2.031245 CCACAACTGTAATCGCTGCAAA 60.031 45.455 0.00 0.00 0.00 3.68
2322 2677 1.535028 CCACAACTGTAATCGCTGCAA 59.465 47.619 0.00 0.00 0.00 4.08
2323 2678 1.155889 CCACAACTGTAATCGCTGCA 58.844 50.000 0.00 0.00 0.00 4.41
2324 2679 1.438651 TCCACAACTGTAATCGCTGC 58.561 50.000 0.00 0.00 0.00 5.25
2325 2680 2.805671 TGTTCCACAACTGTAATCGCTG 59.194 45.455 0.00 0.00 33.17 5.18
2326 2681 3.120321 TGTTCCACAACTGTAATCGCT 57.880 42.857 0.00 0.00 33.17 4.93
2327 2682 3.188460 ACATGTTCCACAACTGTAATCGC 59.812 43.478 0.00 0.00 33.17 4.58
2328 2683 5.637810 AGTACATGTTCCACAACTGTAATCG 59.362 40.000 2.30 0.00 32.58 3.34
2329 2684 6.620733 GCAGTACATGTTCCACAACTGTAATC 60.621 42.308 20.01 5.38 37.02 1.75
2330 2685 5.181245 GCAGTACATGTTCCACAACTGTAAT 59.819 40.000 20.01 0.00 37.02 1.89
2331 2686 4.513692 GCAGTACATGTTCCACAACTGTAA 59.486 41.667 20.01 0.00 37.02 2.41
2332 2687 4.062293 GCAGTACATGTTCCACAACTGTA 58.938 43.478 20.01 0.00 37.02 2.74
2333 2688 2.878406 GCAGTACATGTTCCACAACTGT 59.122 45.455 20.01 0.39 37.02 3.55
2334 2689 2.877786 TGCAGTACATGTTCCACAACTG 59.122 45.455 16.47 16.47 37.47 3.16
2335 2690 3.141398 CTGCAGTACATGTTCCACAACT 58.859 45.455 2.30 0.00 33.17 3.16
2336 2691 2.878406 ACTGCAGTACATGTTCCACAAC 59.122 45.455 20.16 0.00 0.00 3.32
2337 2692 3.207265 ACTGCAGTACATGTTCCACAA 57.793 42.857 20.16 0.00 0.00 3.33
2338 2693 2.928801 ACTGCAGTACATGTTCCACA 57.071 45.000 20.16 0.00 0.00 4.17
2339 2694 5.880054 AAATACTGCAGTACATGTTCCAC 57.120 39.130 28.28 0.00 32.72 4.02
2340 2695 6.707290 ACTAAATACTGCAGTACATGTTCCA 58.293 36.000 28.28 5.62 32.72 3.53
2341 2696 8.712285 TTACTAAATACTGCAGTACATGTTCC 57.288 34.615 28.28 0.00 32.72 3.62
2342 2697 9.582431 TCTTACTAAATACTGCAGTACATGTTC 57.418 33.333 28.28 0.00 32.72 3.18
2343 2698 9.938280 TTCTTACTAAATACTGCAGTACATGTT 57.062 29.630 28.28 20.04 32.72 2.71
2347 2702 9.938280 AACATTCTTACTAAATACTGCAGTACA 57.062 29.630 28.28 15.22 32.72 2.90
2350 2705 9.726438 AAGAACATTCTTACTAAATACTGCAGT 57.274 29.630 25.12 25.12 45.17 4.40
2352 2707 9.719355 TGAAGAACATTCTTACTAAATACTGCA 57.281 29.630 6.85 0.00 46.84 4.41
2362 2717 9.381033 CTCATCAATCTGAAGAACATTCTTACT 57.619 33.333 6.85 0.00 46.84 2.24
2363 2718 8.610896 CCTCATCAATCTGAAGAACATTCTTAC 58.389 37.037 6.85 2.74 46.84 2.34
2364 2719 8.542926 TCCTCATCAATCTGAAGAACATTCTTA 58.457 33.333 6.85 0.00 46.84 2.10
2366 2721 6.955364 TCCTCATCAATCTGAAGAACATTCT 58.045 36.000 0.00 0.00 39.74 2.40
2367 2722 7.804843 ATCCTCATCAATCTGAAGAACATTC 57.195 36.000 0.00 0.00 0.00 2.67
2368 2723 9.339850 CTTATCCTCATCAATCTGAAGAACATT 57.660 33.333 0.00 0.00 0.00 2.71
2369 2724 8.712103 TCTTATCCTCATCAATCTGAAGAACAT 58.288 33.333 0.00 0.00 0.00 2.71
2370 2725 8.082672 TCTTATCCTCATCAATCTGAAGAACA 57.917 34.615 0.00 0.00 0.00 3.18
2371 2726 8.203485 ACTCTTATCCTCATCAATCTGAAGAAC 58.797 37.037 0.00 0.00 0.00 3.01
2372 2727 8.202811 CACTCTTATCCTCATCAATCTGAAGAA 58.797 37.037 0.00 0.00 0.00 2.52
2373 2728 7.686371 GCACTCTTATCCTCATCAATCTGAAGA 60.686 40.741 0.00 0.00 0.00 2.87
2374 2729 6.424509 GCACTCTTATCCTCATCAATCTGAAG 59.575 42.308 0.00 0.00 0.00 3.02
2375 2730 6.126968 TGCACTCTTATCCTCATCAATCTGAA 60.127 38.462 0.00 0.00 0.00 3.02
2376 2731 5.364735 TGCACTCTTATCCTCATCAATCTGA 59.635 40.000 0.00 0.00 0.00 3.27
2377 2732 5.608449 TGCACTCTTATCCTCATCAATCTG 58.392 41.667 0.00 0.00 0.00 2.90
2378 2733 5.883685 TGCACTCTTATCCTCATCAATCT 57.116 39.130 0.00 0.00 0.00 2.40
2379 2734 6.485984 ACAATGCACTCTTATCCTCATCAATC 59.514 38.462 0.00 0.00 0.00 2.67
2380 2735 6.262496 CACAATGCACTCTTATCCTCATCAAT 59.738 38.462 0.00 0.00 0.00 2.57
2381 2736 5.587443 CACAATGCACTCTTATCCTCATCAA 59.413 40.000 0.00 0.00 0.00 2.57
2382 2737 5.121105 CACAATGCACTCTTATCCTCATCA 58.879 41.667 0.00 0.00 0.00 3.07
2383 2738 4.514441 CCACAATGCACTCTTATCCTCATC 59.486 45.833 0.00 0.00 0.00 2.92
2384 2739 4.164796 TCCACAATGCACTCTTATCCTCAT 59.835 41.667 0.00 0.00 0.00 2.90
2385 2740 3.519107 TCCACAATGCACTCTTATCCTCA 59.481 43.478 0.00 0.00 0.00 3.86
2386 2741 4.142609 TCCACAATGCACTCTTATCCTC 57.857 45.455 0.00 0.00 0.00 3.71
2387 2742 4.785346 ATCCACAATGCACTCTTATCCT 57.215 40.909 0.00 0.00 0.00 3.24
2388 2743 6.058183 AGTAATCCACAATGCACTCTTATCC 58.942 40.000 0.00 0.00 0.00 2.59
2389 2744 6.763135 TGAGTAATCCACAATGCACTCTTATC 59.237 38.462 0.00 0.00 33.98 1.75
2390 2745 6.653020 TGAGTAATCCACAATGCACTCTTAT 58.347 36.000 0.00 0.00 33.98 1.73
2391 2746 6.048732 TGAGTAATCCACAATGCACTCTTA 57.951 37.500 0.00 0.00 33.98 2.10
2392 2747 4.910195 TGAGTAATCCACAATGCACTCTT 58.090 39.130 0.00 0.00 33.98 2.85
2393 2748 4.558226 TGAGTAATCCACAATGCACTCT 57.442 40.909 0.00 0.00 33.98 3.24
2394 2749 5.124457 ACAATGAGTAATCCACAATGCACTC 59.876 40.000 0.00 0.00 33.67 3.51
2395 2750 5.012239 ACAATGAGTAATCCACAATGCACT 58.988 37.500 0.00 0.00 0.00 4.40
2396 2751 5.097529 CACAATGAGTAATCCACAATGCAC 58.902 41.667 0.00 0.00 0.00 4.57
2397 2752 4.766373 ACACAATGAGTAATCCACAATGCA 59.234 37.500 0.00 0.00 0.00 3.96
2398 2753 5.124457 AGACACAATGAGTAATCCACAATGC 59.876 40.000 0.00 0.00 0.00 3.56
2399 2754 6.748333 AGACACAATGAGTAATCCACAATG 57.252 37.500 0.00 0.00 0.00 2.82
2400 2755 7.120285 CAGAAGACACAATGAGTAATCCACAAT 59.880 37.037 0.00 0.00 0.00 2.71
2401 2756 6.427853 CAGAAGACACAATGAGTAATCCACAA 59.572 38.462 0.00 0.00 0.00 3.33
2402 2757 5.934043 CAGAAGACACAATGAGTAATCCACA 59.066 40.000 0.00 0.00 0.00 4.17
2403 2758 6.166279 TCAGAAGACACAATGAGTAATCCAC 58.834 40.000 0.00 0.00 0.00 4.02
2404 2759 6.358974 TCAGAAGACACAATGAGTAATCCA 57.641 37.500 0.00 0.00 0.00 3.41
2405 2760 9.553064 AATATCAGAAGACACAATGAGTAATCC 57.447 33.333 0.00 0.00 0.00 3.01
2407 2762 9.896645 ACAATATCAGAAGACACAATGAGTAAT 57.103 29.630 0.00 0.00 0.00 1.89
2408 2763 9.725019 AACAATATCAGAAGACACAATGAGTAA 57.275 29.630 0.00 0.00 0.00 2.24
2409 2764 9.725019 AAACAATATCAGAAGACACAATGAGTA 57.275 29.630 0.00 0.00 0.00 2.59
2410 2765 8.509690 CAAACAATATCAGAAGACACAATGAGT 58.490 33.333 0.00 0.00 0.00 3.41
2411 2766 8.509690 ACAAACAATATCAGAAGACACAATGAG 58.490 33.333 0.00 0.00 0.00 2.90
2412 2767 8.291740 CACAAACAATATCAGAAGACACAATGA 58.708 33.333 0.00 0.00 0.00 2.57
2413 2768 7.539710 CCACAAACAATATCAGAAGACACAATG 59.460 37.037 0.00 0.00 0.00 2.82
2414 2769 7.309377 CCCACAAACAATATCAGAAGACACAAT 60.309 37.037 0.00 0.00 0.00 2.71
2415 2770 6.016360 CCCACAAACAATATCAGAAGACACAA 60.016 38.462 0.00 0.00 0.00 3.33
2416 2771 5.473162 CCCACAAACAATATCAGAAGACACA 59.527 40.000 0.00 0.00 0.00 3.72
2417 2772 5.106157 CCCCACAAACAATATCAGAAGACAC 60.106 44.000 0.00 0.00 0.00 3.67
2418 2773 5.009631 CCCCACAAACAATATCAGAAGACA 58.990 41.667 0.00 0.00 0.00 3.41
2419 2774 4.142381 GCCCCACAAACAATATCAGAAGAC 60.142 45.833 0.00 0.00 0.00 3.01
2420 2775 4.016444 GCCCCACAAACAATATCAGAAGA 58.984 43.478 0.00 0.00 0.00 2.87
2421 2776 4.019174 AGCCCCACAAACAATATCAGAAG 58.981 43.478 0.00 0.00 0.00 2.85
2422 2777 4.046286 AGCCCCACAAACAATATCAGAA 57.954 40.909 0.00 0.00 0.00 3.02
2423 2778 3.737559 AGCCCCACAAACAATATCAGA 57.262 42.857 0.00 0.00 0.00 3.27
2424 2779 3.763360 TGAAGCCCCACAAACAATATCAG 59.237 43.478 0.00 0.00 0.00 2.90
2425 2780 3.763360 CTGAAGCCCCACAAACAATATCA 59.237 43.478 0.00 0.00 0.00 2.15
2426 2781 4.016444 TCTGAAGCCCCACAAACAATATC 58.984 43.478 0.00 0.00 0.00 1.63
2427 2782 4.046286 TCTGAAGCCCCACAAACAATAT 57.954 40.909 0.00 0.00 0.00 1.28
2428 2783 3.517296 TCTGAAGCCCCACAAACAATA 57.483 42.857 0.00 0.00 0.00 1.90
2429 2784 2.380064 TCTGAAGCCCCACAAACAAT 57.620 45.000 0.00 0.00 0.00 2.71
2430 2785 2.151502 TTCTGAAGCCCCACAAACAA 57.848 45.000 0.00 0.00 0.00 2.83
2431 2786 2.380064 ATTCTGAAGCCCCACAAACA 57.620 45.000 0.00 0.00 0.00 2.83
2432 2787 3.069443 TGAAATTCTGAAGCCCCACAAAC 59.931 43.478 0.00 0.00 0.00 2.93
2433 2788 3.303938 TGAAATTCTGAAGCCCCACAAA 58.696 40.909 0.00 0.00 0.00 2.83
2434 2789 2.956132 TGAAATTCTGAAGCCCCACAA 58.044 42.857 0.00 0.00 0.00 3.33
2435 2790 2.673775 TGAAATTCTGAAGCCCCACA 57.326 45.000 0.00 0.00 0.00 4.17
2436 2791 3.091545 TCATGAAATTCTGAAGCCCCAC 58.908 45.455 0.00 0.00 0.00 4.61
2437 2792 3.454719 TCATGAAATTCTGAAGCCCCA 57.545 42.857 0.00 0.00 0.00 4.96
2438 2793 4.382345 CTTCATGAAATTCTGAAGCCCC 57.618 45.455 9.88 0.00 41.20 5.80
2442 2797 7.308408 TCAGAACAGCTTCATGAAATTCTGAAG 60.308 37.037 29.45 20.57 44.50 3.02
2443 2798 6.487668 TCAGAACAGCTTCATGAAATTCTGAA 59.512 34.615 29.45 20.93 44.50 3.02
2444 2799 5.999600 TCAGAACAGCTTCATGAAATTCTGA 59.000 36.000 28.73 28.73 44.98 3.27
2445 2800 6.250344 TCAGAACAGCTTCATGAAATTCTG 57.750 37.500 26.65 26.65 41.78 3.02
2446 2801 5.415077 CCTCAGAACAGCTTCATGAAATTCT 59.585 40.000 9.88 12.44 0.00 2.40
2447 2802 5.182760 ACCTCAGAACAGCTTCATGAAATTC 59.817 40.000 9.88 10.57 0.00 2.17
2448 2803 5.075493 ACCTCAGAACAGCTTCATGAAATT 58.925 37.500 9.88 1.89 0.00 1.82
2449 2804 4.660168 ACCTCAGAACAGCTTCATGAAAT 58.340 39.130 9.88 0.00 0.00 2.17
2450 2805 4.090761 ACCTCAGAACAGCTTCATGAAA 57.909 40.909 9.88 0.00 0.00 2.69
2451 2806 3.777106 ACCTCAGAACAGCTTCATGAA 57.223 42.857 8.12 8.12 0.00 2.57
2452 2807 3.071457 TCAACCTCAGAACAGCTTCATGA 59.929 43.478 0.00 0.00 0.00 3.07
2453 2808 3.405831 TCAACCTCAGAACAGCTTCATG 58.594 45.455 0.00 0.00 0.00 3.07
2454 2809 3.777106 TCAACCTCAGAACAGCTTCAT 57.223 42.857 0.00 0.00 0.00 2.57
2455 2810 3.405831 CATCAACCTCAGAACAGCTTCA 58.594 45.455 0.00 0.00 0.00 3.02
2456 2811 2.746362 CCATCAACCTCAGAACAGCTTC 59.254 50.000 0.00 0.00 0.00 3.86
2457 2812 2.107204 ACCATCAACCTCAGAACAGCTT 59.893 45.455 0.00 0.00 0.00 3.74
2458 2813 1.701847 ACCATCAACCTCAGAACAGCT 59.298 47.619 0.00 0.00 0.00 4.24
2459 2814 2.191128 ACCATCAACCTCAGAACAGC 57.809 50.000 0.00 0.00 0.00 4.40
2460 2815 6.037610 GCTATAAACCATCAACCTCAGAACAG 59.962 42.308 0.00 0.00 0.00 3.16
2461 2816 5.880332 GCTATAAACCATCAACCTCAGAACA 59.120 40.000 0.00 0.00 0.00 3.18
2462 2817 6.116126 AGCTATAAACCATCAACCTCAGAAC 58.884 40.000 0.00 0.00 0.00 3.01
2463 2818 6.313519 AGCTATAAACCATCAACCTCAGAA 57.686 37.500 0.00 0.00 0.00 3.02
2464 2819 5.957771 AGCTATAAACCATCAACCTCAGA 57.042 39.130 0.00 0.00 0.00 3.27
2465 2820 6.148480 GCATAGCTATAAACCATCAACCTCAG 59.852 42.308 5.77 0.00 0.00 3.35
2466 2821 5.997746 GCATAGCTATAAACCATCAACCTCA 59.002 40.000 5.77 0.00 0.00 3.86
2467 2822 5.412904 GGCATAGCTATAAACCATCAACCTC 59.587 44.000 5.77 0.00 0.00 3.85
2468 2823 5.073691 AGGCATAGCTATAAACCATCAACCT 59.926 40.000 17.41 6.05 0.00 3.50
2469 2824 5.182001 CAGGCATAGCTATAAACCATCAACC 59.818 44.000 17.41 4.38 0.00 3.77
2504 2860 4.647291 AACGAGTCGCAAAAGAACATAG 57.353 40.909 13.59 0.00 0.00 2.23


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.