Multiple sequence alignment - TraesCS1A01G181100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G181100 chr1A 100.000 2495 0 0 1 2495 327272863 327270369 0.000000e+00 4608.0
1 TraesCS1A01G181100 chr1A 87.692 130 10 1 2363 2492 105988259 105988382 2.000000e-31 147.0
2 TraesCS1A01G181100 chr1A 89.744 117 9 2 2360 2476 478912444 478912557 2.000000e-31 147.0
3 TraesCS1A01G181100 chr1D 92.295 1804 77 33 588 2370 255427839 255426077 0.000000e+00 2505.0
4 TraesCS1A01G181100 chr1D 88.645 502 52 5 87 586 255436649 255436151 7.630000e-170 606.0
5 TraesCS1A01G181100 chr1D 98.276 58 1 0 2161 2218 255426344 255426287 4.390000e-18 102.0
6 TraesCS1A01G181100 chr1B 94.022 1539 51 18 469 1976 357469659 357471187 0.000000e+00 2294.0
7 TraesCS1A01G181100 chr1B 95.745 47 2 0 1 47 328944078 328944032 2.660000e-10 76.8
8 TraesCS1A01G181100 chr4A 91.667 144 11 1 2224 2366 219341691 219341548 5.440000e-47 198.0
9 TraesCS1A01G181100 chr3B 91.200 125 11 0 2361 2485 549426187 549426063 1.190000e-38 171.0
10 TraesCS1A01G181100 chr5B 89.922 129 13 0 2367 2495 398800473 398800345 1.530000e-37 167.0
11 TraesCS1A01G181100 chr5D 91.892 111 7 2 2367 2476 375284722 375284831 1.200000e-33 154.0
12 TraesCS1A01G181100 chr6D 89.916 119 10 1 2367 2485 139584508 139584392 4.300000e-33 152.0
13 TraesCS1A01G181100 chr6D 86.885 122 10 3 2356 2476 18392832 18392948 5.600000e-27 132.0
14 TraesCS1A01G181100 chr7A 86.726 113 15 0 2364 2476 734993379 734993491 2.610000e-25 126.0
15 TraesCS1A01G181100 chr7A 86.667 105 13 1 242 346 571383503 571383400 5.640000e-22 115.0
16 TraesCS1A01G181100 chr7B 86.364 110 15 0 2367 2476 745029984 745030093 1.210000e-23 121.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G181100 chr1A 327270369 327272863 2494 True 4608.0 4608 100.0000 1 2495 1 chr1A.!!$R1 2494
1 TraesCS1A01G181100 chr1D 255426077 255427839 1762 True 1303.5 2505 95.2855 588 2370 2 chr1D.!!$R2 1782
2 TraesCS1A01G181100 chr1B 357469659 357471187 1528 False 2294.0 2294 94.0220 469 1976 1 chr1B.!!$F1 1507

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
436 437 0.034477 AATACTTGTCGGCCCCCTTG 60.034 55.0 0.0 0.0 0.0 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2063 2113 0.110192 GCAAGTTGCACGAGGCTTAC 60.11 55.0 22.9 0.0 44.26 2.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.905660 AAATGGACATATGAGAGAGAAATGAG 57.094 34.615 10.38 0.00 0.00 2.90
26 27 7.615039 ATGGACATATGAGAGAGAAATGAGT 57.385 36.000 10.38 0.00 0.00 3.41
27 28 7.429374 TGGACATATGAGAGAGAAATGAGTT 57.571 36.000 10.38 0.00 0.00 3.01
28 29 7.855375 TGGACATATGAGAGAGAAATGAGTTT 58.145 34.615 10.38 0.00 0.00 2.66
29 30 7.984050 TGGACATATGAGAGAGAAATGAGTTTC 59.016 37.037 10.38 0.00 43.24 2.78
30 31 7.984050 GGACATATGAGAGAGAAATGAGTTTCA 59.016 37.037 10.38 0.00 44.92 2.69
31 32 8.945481 ACATATGAGAGAGAAATGAGTTTCAG 57.055 34.615 10.38 0.00 44.92 3.02
32 33 8.538701 ACATATGAGAGAGAAATGAGTTTCAGT 58.461 33.333 10.38 0.00 44.92 3.41
33 34 8.819015 CATATGAGAGAGAAATGAGTTTCAGTG 58.181 37.037 0.00 0.00 44.92 3.66
34 35 6.410942 TGAGAGAGAAATGAGTTTCAGTGA 57.589 37.500 4.01 0.00 44.92 3.41
35 36 7.002250 TGAGAGAGAAATGAGTTTCAGTGAT 57.998 36.000 0.00 0.00 44.92 3.06
36 37 7.448420 TGAGAGAGAAATGAGTTTCAGTGATT 58.552 34.615 0.00 0.00 44.92 2.57
37 38 7.601886 TGAGAGAGAAATGAGTTTCAGTGATTC 59.398 37.037 0.00 0.00 44.92 2.52
38 39 7.448420 AGAGAGAAATGAGTTTCAGTGATTCA 58.552 34.615 0.00 0.00 44.92 2.57
39 40 8.102047 AGAGAGAAATGAGTTTCAGTGATTCAT 58.898 33.333 0.00 1.72 44.92 2.57
40 41 8.632906 AGAGAAATGAGTTTCAGTGATTCATT 57.367 30.769 16.32 16.32 44.92 2.57
41 42 9.075678 AGAGAAATGAGTTTCAGTGATTCATTT 57.924 29.630 25.28 25.28 45.81 2.32
88 89 3.901667 GCACATGCGTTGTACTAGTAC 57.098 47.619 23.58 23.58 36.57 2.73
89 90 3.508762 GCACATGCGTTGTACTAGTACT 58.491 45.455 28.56 9.13 36.57 2.73
90 91 3.546670 GCACATGCGTTGTACTAGTACTC 59.453 47.826 28.56 20.78 36.57 2.59
91 92 4.674623 GCACATGCGTTGTACTAGTACTCT 60.675 45.833 28.56 8.57 36.57 3.24
92 93 5.448225 GCACATGCGTTGTACTAGTACTCTA 60.448 44.000 28.56 14.48 36.57 2.43
93 94 6.549061 CACATGCGTTGTACTAGTACTCTAA 58.451 40.000 28.56 15.33 36.57 2.10
94 95 7.025365 CACATGCGTTGTACTAGTACTCTAAA 58.975 38.462 28.56 15.01 36.57 1.85
95 96 7.701078 CACATGCGTTGTACTAGTACTCTAAAT 59.299 37.037 28.56 16.27 36.57 1.40
96 97 7.701078 ACATGCGTTGTACTAGTACTCTAAATG 59.299 37.037 28.56 25.10 36.57 2.32
97 98 7.149569 TGCGTTGTACTAGTACTCTAAATGT 57.850 36.000 28.56 0.00 37.00 2.71
98 99 7.596494 TGCGTTGTACTAGTACTCTAAATGTT 58.404 34.615 28.56 0.00 37.00 2.71
99 100 8.729756 TGCGTTGTACTAGTACTCTAAATGTTA 58.270 33.333 28.56 13.13 37.00 2.41
100 101 9.727627 GCGTTGTACTAGTACTCTAAATGTTAT 57.272 33.333 28.56 0.00 37.00 1.89
120 121 9.850628 ATGTTATTGAGTGACATTTTCTTCATG 57.149 29.630 0.00 0.00 33.64 3.07
121 122 8.849168 TGTTATTGAGTGACATTTTCTTCATGT 58.151 29.630 0.00 0.00 37.58 3.21
122 123 9.683069 GTTATTGAGTGACATTTTCTTCATGTT 57.317 29.630 0.00 0.00 34.89 2.71
125 126 9.850628 ATTGAGTGACATTTTCTTCATGTTATG 57.149 29.630 0.00 0.00 34.89 1.90
126 127 7.307694 TGAGTGACATTTTCTTCATGTTATGC 58.692 34.615 0.00 0.00 34.89 3.14
127 128 7.175467 TGAGTGACATTTTCTTCATGTTATGCT 59.825 33.333 0.00 0.00 34.89 3.79
128 129 7.889469 AGTGACATTTTCTTCATGTTATGCTT 58.111 30.769 0.00 0.00 34.89 3.91
129 130 8.362639 AGTGACATTTTCTTCATGTTATGCTTT 58.637 29.630 0.00 0.00 34.89 3.51
130 131 8.981647 GTGACATTTTCTTCATGTTATGCTTTT 58.018 29.630 0.00 0.00 34.89 2.27
131 132 8.980610 TGACATTTTCTTCATGTTATGCTTTTG 58.019 29.630 0.00 0.00 34.89 2.44
132 133 8.891671 ACATTTTCTTCATGTTATGCTTTTGT 57.108 26.923 0.00 0.00 30.22 2.83
133 134 8.981647 ACATTTTCTTCATGTTATGCTTTTGTC 58.018 29.630 0.00 0.00 30.22 3.18
134 135 8.980610 CATTTTCTTCATGTTATGCTTTTGTCA 58.019 29.630 0.00 0.00 0.00 3.58
135 136 9.715121 ATTTTCTTCATGTTATGCTTTTGTCAT 57.285 25.926 0.00 0.00 0.00 3.06
136 137 8.746922 TTTCTTCATGTTATGCTTTTGTCATC 57.253 30.769 0.00 0.00 0.00 2.92
137 138 6.545508 TCTTCATGTTATGCTTTTGTCATCG 58.454 36.000 0.00 0.00 0.00 3.84
138 139 5.878332 TCATGTTATGCTTTTGTCATCGT 57.122 34.783 0.00 0.00 0.00 3.73
139 140 5.630061 TCATGTTATGCTTTTGTCATCGTG 58.370 37.500 0.00 0.00 0.00 4.35
140 141 5.181056 TCATGTTATGCTTTTGTCATCGTGT 59.819 36.000 0.00 0.00 0.00 4.49
141 142 5.029650 TGTTATGCTTTTGTCATCGTGTC 57.970 39.130 0.00 0.00 0.00 3.67
142 143 4.513318 TGTTATGCTTTTGTCATCGTGTCA 59.487 37.500 0.00 0.00 0.00 3.58
143 144 5.008118 TGTTATGCTTTTGTCATCGTGTCAA 59.992 36.000 0.00 0.00 0.00 3.18
144 145 4.566545 ATGCTTTTGTCATCGTGTCAAA 57.433 36.364 6.40 6.40 34.56 2.69
145 146 4.362932 TGCTTTTGTCATCGTGTCAAAA 57.637 36.364 15.82 15.82 40.87 2.44
146 147 4.738124 TGCTTTTGTCATCGTGTCAAAAA 58.262 34.783 16.68 6.38 41.88 1.94
187 188 5.941948 AGAACAAAAATCCAAGACCTACG 57.058 39.130 0.00 0.00 0.00 3.51
188 189 5.617252 AGAACAAAAATCCAAGACCTACGA 58.383 37.500 0.00 0.00 0.00 3.43
189 190 5.701290 AGAACAAAAATCCAAGACCTACGAG 59.299 40.000 0.00 0.00 0.00 4.18
190 191 4.969484 ACAAAAATCCAAGACCTACGAGT 58.031 39.130 0.00 0.00 0.00 4.18
191 192 4.995487 ACAAAAATCCAAGACCTACGAGTC 59.005 41.667 0.00 0.00 37.01 3.36
193 194 6.014840 ACAAAAATCCAAGACCTACGAGTCTA 60.015 38.462 7.70 0.00 46.44 2.59
194 195 6.793505 AAAATCCAAGACCTACGAGTCTAT 57.206 37.500 7.70 0.00 46.44 1.98
195 196 7.893124 AAAATCCAAGACCTACGAGTCTATA 57.107 36.000 7.70 0.00 46.44 1.31
196 197 8.480133 AAAATCCAAGACCTACGAGTCTATAT 57.520 34.615 7.70 1.46 46.44 0.86
197 198 9.584008 AAAATCCAAGACCTACGAGTCTATATA 57.416 33.333 7.70 0.00 46.44 0.86
198 199 9.584008 AAATCCAAGACCTACGAGTCTATATAA 57.416 33.333 7.70 0.00 46.44 0.98
199 200 7.976135 TCCAAGACCTACGAGTCTATATAAC 57.024 40.000 7.70 0.00 46.44 1.89
200 201 7.743749 TCCAAGACCTACGAGTCTATATAACT 58.256 38.462 7.70 0.00 46.44 2.24
201 202 7.877097 TCCAAGACCTACGAGTCTATATAACTC 59.123 40.741 7.70 11.82 46.44 3.01
202 203 7.879160 CCAAGACCTACGAGTCTATATAACTCT 59.121 40.741 16.33 10.05 46.44 3.24
203 204 9.275398 CAAGACCTACGAGTCTATATAACTCTT 57.725 37.037 16.33 12.34 46.44 2.85
205 206 9.927668 AGACCTACGAGTCTATATAACTCTTAC 57.072 37.037 16.33 6.57 45.31 2.34
206 207 9.703892 GACCTACGAGTCTATATAACTCTTACA 57.296 37.037 16.33 5.18 40.82 2.41
244 245 9.475620 TTTTCTTTTCTTAATAATCTCTCCCCC 57.524 33.333 0.00 0.00 0.00 5.40
245 246 8.407313 TTCTTTTCTTAATAATCTCTCCCCCT 57.593 34.615 0.00 0.00 0.00 4.79
246 247 7.806180 TCTTTTCTTAATAATCTCTCCCCCTG 58.194 38.462 0.00 0.00 0.00 4.45
247 248 7.627697 TCTTTTCTTAATAATCTCTCCCCCTGA 59.372 37.037 0.00 0.00 0.00 3.86
248 249 7.765149 TTTCTTAATAATCTCTCCCCCTGAA 57.235 36.000 0.00 0.00 0.00 3.02
249 250 7.954539 TTCTTAATAATCTCTCCCCCTGAAT 57.045 36.000 0.00 0.00 0.00 2.57
250 251 7.954539 TCTTAATAATCTCTCCCCCTGAATT 57.045 36.000 0.00 0.00 0.00 2.17
251 252 8.350180 TCTTAATAATCTCTCCCCCTGAATTT 57.650 34.615 0.00 0.00 0.00 1.82
252 253 8.791749 TCTTAATAATCTCTCCCCCTGAATTTT 58.208 33.333 0.00 0.00 0.00 1.82
256 257 4.862641 TCTCTCCCCCTGAATTTTAAGG 57.137 45.455 0.00 0.00 0.00 2.69
257 258 4.183916 TCTCTCCCCCTGAATTTTAAGGT 58.816 43.478 3.05 0.00 0.00 3.50
258 259 4.018415 TCTCTCCCCCTGAATTTTAAGGTG 60.018 45.833 3.05 0.00 0.00 4.00
259 260 3.011257 TCTCCCCCTGAATTTTAAGGTGG 59.989 47.826 0.00 0.00 32.69 4.61
260 261 2.043801 TCCCCCTGAATTTTAAGGTGGG 59.956 50.000 15.74 15.74 41.75 4.61
261 262 2.466846 CCCCTGAATTTTAAGGTGGGG 58.533 52.381 0.00 0.00 45.60 4.96
262 263 1.831106 CCCTGAATTTTAAGGTGGGGC 59.169 52.381 0.00 0.00 0.00 5.80
263 264 2.534990 CCTGAATTTTAAGGTGGGGCA 58.465 47.619 0.00 0.00 0.00 5.36
264 265 2.903135 CCTGAATTTTAAGGTGGGGCAA 59.097 45.455 0.00 0.00 0.00 4.52
265 266 3.326297 CCTGAATTTTAAGGTGGGGCAAA 59.674 43.478 0.00 0.00 0.00 3.68
266 267 4.019411 CCTGAATTTTAAGGTGGGGCAAAT 60.019 41.667 0.00 0.00 0.00 2.32
267 268 5.159273 TGAATTTTAAGGTGGGGCAAATC 57.841 39.130 0.00 0.00 0.00 2.17
268 269 4.019771 TGAATTTTAAGGTGGGGCAAATCC 60.020 41.667 0.00 0.00 0.00 3.01
280 281 2.745968 GGCAAATCCCCCAACTAATGA 58.254 47.619 0.00 0.00 0.00 2.57
281 282 3.308401 GGCAAATCCCCCAACTAATGAT 58.692 45.455 0.00 0.00 0.00 2.45
282 283 4.479158 GGCAAATCCCCCAACTAATGATA 58.521 43.478 0.00 0.00 0.00 2.15
283 284 4.524328 GGCAAATCCCCCAACTAATGATAG 59.476 45.833 0.00 0.00 35.14 2.08
284 285 5.140454 GCAAATCCCCCAACTAATGATAGT 58.860 41.667 0.00 0.00 44.33 2.12
285 286 5.241728 GCAAATCCCCCAACTAATGATAGTC 59.758 44.000 0.00 0.00 41.57 2.59
286 287 5.584551 AATCCCCCAACTAATGATAGTCC 57.415 43.478 0.00 0.00 41.57 3.85
287 288 4.295905 TCCCCCAACTAATGATAGTCCT 57.704 45.455 0.00 0.00 41.57 3.85
288 289 4.232091 TCCCCCAACTAATGATAGTCCTC 58.768 47.826 0.00 0.00 41.57 3.71
289 290 3.328050 CCCCCAACTAATGATAGTCCTCC 59.672 52.174 0.00 0.00 41.57 4.30
290 291 3.973973 CCCCAACTAATGATAGTCCTCCA 59.026 47.826 0.00 0.00 41.57 3.86
291 292 4.412199 CCCCAACTAATGATAGTCCTCCAA 59.588 45.833 0.00 0.00 41.57 3.53
292 293 5.104109 CCCCAACTAATGATAGTCCTCCAAA 60.104 44.000 0.00 0.00 41.57 3.28
293 294 6.410853 CCCCAACTAATGATAGTCCTCCAAAT 60.411 42.308 0.00 0.00 41.57 2.32
294 295 6.712547 CCCAACTAATGATAGTCCTCCAAATC 59.287 42.308 0.00 0.00 41.57 2.17
295 296 7.282585 CCAACTAATGATAGTCCTCCAAATCA 58.717 38.462 0.00 0.00 41.57 2.57
296 297 7.443575 CCAACTAATGATAGTCCTCCAAATCAG 59.556 40.741 0.00 0.00 41.57 2.90
297 298 6.529220 ACTAATGATAGTCCTCCAAATCAGC 58.471 40.000 0.00 0.00 37.90 4.26
298 299 3.845781 TGATAGTCCTCCAAATCAGCC 57.154 47.619 0.00 0.00 0.00 4.85
299 300 2.439507 TGATAGTCCTCCAAATCAGCCC 59.560 50.000 0.00 0.00 0.00 5.19
300 301 1.213296 TAGTCCTCCAAATCAGCCCC 58.787 55.000 0.00 0.00 0.00 5.80
301 302 1.452108 GTCCTCCAAATCAGCCCCG 60.452 63.158 0.00 0.00 0.00 5.73
302 303 1.615124 TCCTCCAAATCAGCCCCGA 60.615 57.895 0.00 0.00 0.00 5.14
303 304 1.452108 CCTCCAAATCAGCCCCGAC 60.452 63.158 0.00 0.00 0.00 4.79
304 305 1.815421 CTCCAAATCAGCCCCGACG 60.815 63.158 0.00 0.00 0.00 5.12
305 306 2.046314 CCAAATCAGCCCCGACGT 60.046 61.111 0.00 0.00 0.00 4.34
306 307 1.219664 CCAAATCAGCCCCGACGTA 59.780 57.895 0.00 0.00 0.00 3.57
307 308 0.391927 CCAAATCAGCCCCGACGTAA 60.392 55.000 0.00 0.00 0.00 3.18
308 309 0.725117 CAAATCAGCCCCGACGTAAC 59.275 55.000 0.00 0.00 0.00 2.50
309 310 0.322322 AAATCAGCCCCGACGTAACA 59.678 50.000 0.00 0.00 0.00 2.41
310 311 0.539986 AATCAGCCCCGACGTAACAT 59.460 50.000 0.00 0.00 0.00 2.71
311 312 1.405872 ATCAGCCCCGACGTAACATA 58.594 50.000 0.00 0.00 0.00 2.29
312 313 0.457035 TCAGCCCCGACGTAACATAC 59.543 55.000 0.00 0.00 0.00 2.39
327 328 7.309099 CGTAACATACGTAGAGAACATCATG 57.691 40.000 0.08 0.00 46.41 3.07
328 329 6.910972 CGTAACATACGTAGAGAACATCATGT 59.089 38.462 0.08 0.00 46.41 3.21
329 330 8.066000 CGTAACATACGTAGAGAACATCATGTA 58.934 37.037 0.08 0.00 46.41 2.29
330 331 9.383462 GTAACATACGTAGAGAACATCATGTAG 57.617 37.037 0.08 0.00 0.00 2.74
331 332 7.803279 ACATACGTAGAGAACATCATGTAGA 57.197 36.000 0.08 0.00 0.00 2.59
332 333 8.397575 ACATACGTAGAGAACATCATGTAGAT 57.602 34.615 0.08 0.00 37.48 1.98
348 349 8.822652 TCATGTAGATGTAACATTGCTCTATG 57.177 34.615 0.00 0.00 35.39 2.23
349 350 8.424133 TCATGTAGATGTAACATTGCTCTATGT 58.576 33.333 0.00 0.00 40.37 2.29
350 351 9.696917 CATGTAGATGTAACATTGCTCTATGTA 57.303 33.333 0.00 0.00 37.76 2.29
358 359 9.062524 TGTAACATTGCTCTATGTAAAAACAGT 57.937 29.630 0.00 0.00 37.76 3.55
359 360 9.893305 GTAACATTGCTCTATGTAAAAACAGTT 57.107 29.630 0.00 0.00 37.76 3.16
360 361 8.801715 AACATTGCTCTATGTAAAAACAGTTG 57.198 30.769 0.00 0.00 37.76 3.16
361 362 7.370383 ACATTGCTCTATGTAAAAACAGTTGG 58.630 34.615 0.00 0.00 36.99 3.77
362 363 7.230510 ACATTGCTCTATGTAAAAACAGTTGGA 59.769 33.333 0.00 0.00 36.99 3.53
363 364 6.801539 TGCTCTATGTAAAAACAGTTGGAG 57.198 37.500 0.00 0.00 0.00 3.86
364 365 6.296026 TGCTCTATGTAAAAACAGTTGGAGT 58.704 36.000 0.00 0.00 0.00 3.85
365 366 7.446769 TGCTCTATGTAAAAACAGTTGGAGTA 58.553 34.615 0.00 0.00 0.00 2.59
366 367 7.386848 TGCTCTATGTAAAAACAGTTGGAGTAC 59.613 37.037 0.00 0.00 0.00 2.73
367 368 7.411588 GCTCTATGTAAAAACAGTTGGAGTACG 60.412 40.741 0.00 0.00 0.00 3.67
368 369 7.660112 TCTATGTAAAAACAGTTGGAGTACGA 58.340 34.615 0.00 0.00 0.00 3.43
369 370 8.308931 TCTATGTAAAAACAGTTGGAGTACGAT 58.691 33.333 0.00 0.00 0.00 3.73
370 371 9.577110 CTATGTAAAAACAGTTGGAGTACGATA 57.423 33.333 0.00 0.00 0.00 2.92
371 372 8.836268 ATGTAAAAACAGTTGGAGTACGATAA 57.164 30.769 0.00 0.00 0.00 1.75
372 373 8.836268 TGTAAAAACAGTTGGAGTACGATAAT 57.164 30.769 0.00 0.00 0.00 1.28
373 374 8.928733 TGTAAAAACAGTTGGAGTACGATAATC 58.071 33.333 0.00 0.00 0.00 1.75
374 375 6.980051 AAAACAGTTGGAGTACGATAATCC 57.020 37.500 0.00 0.00 42.99 3.01
375 376 5.934402 AACAGTTGGAGTACGATAATCCT 57.066 39.130 11.08 0.00 43.09 3.24
376 377 7.414222 AAACAGTTGGAGTACGATAATCCTA 57.586 36.000 11.08 3.47 43.09 2.94
377 378 7.598759 AACAGTTGGAGTACGATAATCCTAT 57.401 36.000 11.08 0.00 43.09 2.57
378 379 8.701908 AACAGTTGGAGTACGATAATCCTATA 57.298 34.615 11.08 0.00 43.09 1.31
379 380 8.880991 ACAGTTGGAGTACGATAATCCTATAT 57.119 34.615 11.08 0.00 43.09 0.86
380 381 8.958506 ACAGTTGGAGTACGATAATCCTATATC 58.041 37.037 11.08 0.00 43.09 1.63
381 382 8.407064 CAGTTGGAGTACGATAATCCTATATCC 58.593 40.741 11.08 0.00 43.09 2.59
382 383 8.114102 AGTTGGAGTACGATAATCCTATATCCA 58.886 37.037 11.08 0.00 43.09 3.41
383 384 8.407064 GTTGGAGTACGATAATCCTATATCCAG 58.593 40.741 11.08 0.00 43.09 3.86
384 385 7.640313 TGGAGTACGATAATCCTATATCCAGT 58.360 38.462 11.08 0.00 43.09 4.00
385 386 8.775151 TGGAGTACGATAATCCTATATCCAGTA 58.225 37.037 11.08 0.00 43.09 2.74
386 387 9.275398 GGAGTACGATAATCCTATATCCAGTAG 57.725 40.741 0.00 0.00 39.71 2.57
389 390 7.811117 ACGATAATCCTATATCCAGTAGAGC 57.189 40.000 0.00 0.00 0.00 4.09
390 391 7.579105 ACGATAATCCTATATCCAGTAGAGCT 58.421 38.462 0.00 0.00 0.00 4.09
391 392 8.715842 ACGATAATCCTATATCCAGTAGAGCTA 58.284 37.037 0.00 0.00 0.00 3.32
392 393 8.995220 CGATAATCCTATATCCAGTAGAGCTAC 58.005 40.741 0.00 0.00 36.35 3.58
393 394 8.911918 ATAATCCTATATCCAGTAGAGCTACG 57.088 38.462 2.28 0.00 40.80 3.51
394 395 6.563037 ATCCTATATCCAGTAGAGCTACGA 57.437 41.667 0.00 0.00 40.80 3.43
395 396 6.370186 TCCTATATCCAGTAGAGCTACGAA 57.630 41.667 0.00 0.00 40.80 3.85
396 397 6.776744 TCCTATATCCAGTAGAGCTACGAAA 58.223 40.000 0.00 0.00 40.80 3.46
397 398 6.879993 TCCTATATCCAGTAGAGCTACGAAAG 59.120 42.308 0.00 0.00 40.80 2.62
398 399 5.968528 ATATCCAGTAGAGCTACGAAAGG 57.031 43.478 0.00 4.26 40.80 3.11
399 400 3.083122 TCCAGTAGAGCTACGAAAGGT 57.917 47.619 0.00 0.00 40.80 3.50
400 401 3.428532 TCCAGTAGAGCTACGAAAGGTT 58.571 45.455 0.00 0.00 40.80 3.50
401 402 3.830755 TCCAGTAGAGCTACGAAAGGTTT 59.169 43.478 0.00 0.00 40.80 3.27
402 403 4.282703 TCCAGTAGAGCTACGAAAGGTTTT 59.717 41.667 0.00 0.00 40.80 2.43
403 404 5.477984 TCCAGTAGAGCTACGAAAGGTTTTA 59.522 40.000 0.00 0.00 40.80 1.52
404 405 5.575995 CCAGTAGAGCTACGAAAGGTTTTAC 59.424 44.000 0.00 0.12 40.80 2.01
405 406 6.154445 CAGTAGAGCTACGAAAGGTTTTACA 58.846 40.000 0.00 0.00 40.80 2.41
406 407 6.812160 CAGTAGAGCTACGAAAGGTTTTACAT 59.188 38.462 0.00 0.00 40.80 2.29
407 408 7.972277 CAGTAGAGCTACGAAAGGTTTTACATA 59.028 37.037 0.00 0.00 40.80 2.29
408 409 8.526147 AGTAGAGCTACGAAAGGTTTTACATAA 58.474 33.333 0.00 0.00 40.80 1.90
409 410 9.310716 GTAGAGCTACGAAAGGTTTTACATAAT 57.689 33.333 0.00 0.00 35.60 1.28
410 411 8.421673 AGAGCTACGAAAGGTTTTACATAATC 57.578 34.615 0.00 0.00 35.60 1.75
411 412 8.258708 AGAGCTACGAAAGGTTTTACATAATCT 58.741 33.333 0.00 0.00 35.60 2.40
412 413 8.788325 AGCTACGAAAGGTTTTACATAATCTT 57.212 30.769 0.00 0.00 29.36 2.40
413 414 9.227777 AGCTACGAAAGGTTTTACATAATCTTT 57.772 29.630 0.00 0.00 29.36 2.52
414 415 9.486857 GCTACGAAAGGTTTTACATAATCTTTC 57.513 33.333 10.56 10.56 37.67 2.62
429 430 8.827677 ACATAATCTTTCTAAATACTTGTCGGC 58.172 33.333 0.00 0.00 0.00 5.54
430 431 6.679327 AATCTTTCTAAATACTTGTCGGCC 57.321 37.500 0.00 0.00 0.00 6.13
431 432 4.510571 TCTTTCTAAATACTTGTCGGCCC 58.489 43.478 0.00 0.00 0.00 5.80
432 433 2.994186 TCTAAATACTTGTCGGCCCC 57.006 50.000 0.00 0.00 0.00 5.80
433 434 1.487558 TCTAAATACTTGTCGGCCCCC 59.512 52.381 0.00 0.00 0.00 5.40
434 435 1.489230 CTAAATACTTGTCGGCCCCCT 59.511 52.381 0.00 0.00 0.00 4.79
435 436 0.702316 AAATACTTGTCGGCCCCCTT 59.298 50.000 0.00 0.00 0.00 3.95
436 437 0.034477 AATACTTGTCGGCCCCCTTG 60.034 55.000 0.00 0.00 0.00 3.61
437 438 0.912487 ATACTTGTCGGCCCCCTTGA 60.912 55.000 0.00 0.00 0.00 3.02
438 439 1.128809 TACTTGTCGGCCCCCTTGAA 61.129 55.000 0.00 0.00 0.00 2.69
439 440 1.000896 CTTGTCGGCCCCCTTGAAT 60.001 57.895 0.00 0.00 0.00 2.57
440 441 0.611896 CTTGTCGGCCCCCTTGAATT 60.612 55.000 0.00 0.00 0.00 2.17
441 442 0.178947 TTGTCGGCCCCCTTGAATTT 60.179 50.000 0.00 0.00 0.00 1.82
442 443 0.610785 TGTCGGCCCCCTTGAATTTC 60.611 55.000 0.00 0.00 0.00 2.17
443 444 0.610785 GTCGGCCCCCTTGAATTTCA 60.611 55.000 0.00 0.00 0.00 2.69
444 445 0.323360 TCGGCCCCCTTGAATTTCAG 60.323 55.000 0.00 0.00 0.00 3.02
445 446 1.322538 CGGCCCCCTTGAATTTCAGG 61.323 60.000 0.00 1.69 0.00 3.86
446 447 0.252239 GGCCCCCTTGAATTTCAGGT 60.252 55.000 7.63 0.00 0.00 4.00
447 448 0.897621 GCCCCCTTGAATTTCAGGTG 59.102 55.000 7.63 0.00 0.00 4.00
448 449 1.827245 GCCCCCTTGAATTTCAGGTGT 60.827 52.381 7.63 0.00 0.00 4.16
449 450 1.895131 CCCCCTTGAATTTCAGGTGTG 59.105 52.381 7.63 0.00 0.00 3.82
450 451 2.597455 CCCCTTGAATTTCAGGTGTGT 58.403 47.619 7.63 0.00 0.00 3.72
451 452 2.297033 CCCCTTGAATTTCAGGTGTGTG 59.703 50.000 7.63 0.00 0.00 3.82
452 453 2.297033 CCCTTGAATTTCAGGTGTGTGG 59.703 50.000 7.63 0.00 0.00 4.17
453 454 2.297033 CCTTGAATTTCAGGTGTGTGGG 59.703 50.000 7.63 0.00 0.00 4.61
454 455 1.993956 TGAATTTCAGGTGTGTGGGG 58.006 50.000 0.00 0.00 0.00 4.96
455 456 0.603065 GAATTTCAGGTGTGTGGGGC 59.397 55.000 0.00 0.00 0.00 5.80
456 457 0.831711 AATTTCAGGTGTGTGGGGCC 60.832 55.000 0.00 0.00 0.00 5.80
457 458 2.730129 ATTTCAGGTGTGTGGGGCCC 62.730 60.000 18.17 18.17 0.00 5.80
461 462 4.233558 GGTGTGTGGGGCCCCTTT 62.234 66.667 40.66 0.00 36.94 3.11
462 463 2.600470 GTGTGTGGGGCCCCTTTC 60.600 66.667 40.66 28.72 36.94 2.62
463 464 2.780924 TGTGTGGGGCCCCTTTCT 60.781 61.111 40.66 0.00 36.94 2.52
464 465 2.035783 GTGTGGGGCCCCTTTCTC 59.964 66.667 40.66 25.21 36.94 2.87
465 466 3.264845 TGTGGGGCCCCTTTCTCC 61.265 66.667 40.66 20.78 36.94 3.71
466 467 2.941583 GTGGGGCCCCTTTCTCCT 60.942 66.667 40.66 0.00 36.94 3.69
467 468 2.614013 TGGGGCCCCTTTCTCCTC 60.614 66.667 40.66 12.40 36.94 3.71
468 469 3.421386 GGGGCCCCTTTCTCCTCC 61.421 72.222 35.49 1.84 0.00 4.30
469 470 2.286502 GGGCCCCTTTCTCCTCCT 60.287 66.667 12.23 0.00 0.00 3.69
470 471 1.931180 GGGCCCCTTTCTCCTCCTT 60.931 63.158 12.23 0.00 0.00 3.36
471 472 1.610327 GGCCCCTTTCTCCTCCTTC 59.390 63.158 0.00 0.00 0.00 3.46
472 473 1.610327 GCCCCTTTCTCCTCCTTCC 59.390 63.158 0.00 0.00 0.00 3.46
480 481 2.359376 TCTCCTCCTTCCCCAATGAA 57.641 50.000 0.00 0.00 0.00 2.57
511 512 3.682858 ACGTTGCTAATCACGTAAAGCAT 59.317 39.130 12.28 0.00 43.94 3.79
513 514 4.435518 CGTTGCTAATCACGTAAAGCATGT 60.436 41.667 12.28 0.00 43.94 3.21
521 522 9.244799 CTAATCACGTAAAGCATGTAACTATCA 57.755 33.333 0.00 0.00 0.00 2.15
522 523 6.880822 TCACGTAAAGCATGTAACTATCAC 57.119 37.500 0.00 0.00 0.00 3.06
523 524 6.627243 TCACGTAAAGCATGTAACTATCACT 58.373 36.000 0.00 0.00 0.00 3.41
524 525 7.764331 TCACGTAAAGCATGTAACTATCACTA 58.236 34.615 0.00 0.00 0.00 2.74
525 526 8.410912 TCACGTAAAGCATGTAACTATCACTAT 58.589 33.333 0.00 0.00 0.00 2.12
555 556 2.504175 AGCATTACCCGTTGGAGTATGT 59.496 45.455 0.00 0.00 34.81 2.29
623 624 3.186119 CGCTTCTCACATTCTCTTCCTC 58.814 50.000 0.00 0.00 0.00 3.71
646 647 4.289342 TCATGTGAAATTGTGAAGCAACG 58.711 39.130 0.00 0.00 40.28 4.10
670 671 6.513230 CGAATTCAGAGAGATGAGTAGAGTGG 60.513 46.154 6.22 0.00 0.00 4.00
888 889 1.070289 CCGCTCTCCCTATAAACACCC 59.930 57.143 0.00 0.00 0.00 4.61
975 980 0.950555 CCAGCACGTTTCAGCTAGCA 60.951 55.000 18.83 0.00 39.50 3.49
977 982 1.264020 CAGCACGTTTCAGCTAGCAAA 59.736 47.619 18.83 6.82 39.50 3.68
987 992 3.077617 GCTAGCAAAGCCAGGAGAG 57.922 57.895 10.63 0.00 46.25 3.20
1080 1085 2.106938 GGCGCGGAGATCATCACA 59.893 61.111 8.83 0.00 0.00 3.58
1086 1091 1.596477 GGAGATCATCACAGGCGCC 60.596 63.158 21.89 21.89 0.00 6.53
1413 1418 3.687102 TCCAACGTCGGCATCGGT 61.687 61.111 0.00 0.00 36.95 4.69
1507 1531 0.930742 GCAGTGATCGATCGACGTCC 60.931 60.000 22.06 10.51 43.13 4.79
1509 1533 1.368969 GTGATCGATCGACGTCCCG 60.369 63.158 22.06 11.31 43.13 5.14
1518 1542 2.491152 GACGTCCCGGCGTTCATA 59.509 61.111 3.51 0.00 45.79 2.15
1519 1543 1.875364 GACGTCCCGGCGTTCATAC 60.875 63.158 3.51 0.00 45.79 2.39
1520 1544 2.275547 GACGTCCCGGCGTTCATACT 62.276 60.000 3.51 0.00 45.79 2.12
1586 1616 1.079543 GAGTGATCTGCGGTGCACT 60.080 57.895 17.98 18.43 43.67 4.40
1606 1636 2.804647 TCATTGGCATGAGTACGTACG 58.195 47.619 19.49 15.01 34.22 3.67
1607 1637 2.164827 TCATTGGCATGAGTACGTACGT 59.835 45.455 25.98 25.98 34.22 3.57
1710 1749 8.860128 TGCTACGTGAATATTCAATAATCGATC 58.140 33.333 23.97 15.16 39.21 3.69
1727 1766 3.581332 TCGATCAAGTCTTTGTTACCCCT 59.419 43.478 0.00 0.00 35.73 4.79
1821 1860 6.201425 CGCTACTATCCGTCTATCTTATCCTC 59.799 46.154 0.00 0.00 0.00 3.71
1827 1866 3.011119 CGTCTATCTTATCCTCCTCCCG 58.989 54.545 0.00 0.00 0.00 5.14
1837 1876 3.187699 CTCCTCCCGATCTGTCGCG 62.188 68.421 0.00 0.00 46.32 5.87
1862 1901 7.114529 CGTCATAATTACTCGTAATGAAGGGAC 59.885 40.741 3.29 5.47 36.04 4.46
1976 2016 2.888414 CACAATACCCCGGTGTTTCTTT 59.112 45.455 0.00 0.00 0.00 2.52
1985 2025 2.295070 CCGGTGTTTCTTTACTTTGGGG 59.705 50.000 0.00 0.00 0.00 4.96
1987 2027 2.696187 GGTGTTTCTTTACTTTGGGGCA 59.304 45.455 0.00 0.00 0.00 5.36
2021 2061 8.471361 TCAGAATAGCTAATCGCATCTAATTG 57.529 34.615 0.00 0.00 42.61 2.32
2035 2085 8.817100 TCGCATCTAATTGTACTCACATTTAAG 58.183 33.333 0.00 0.00 32.78 1.85
2043 2093 9.730420 AATTGTACTCACATTTAAGTTGTTGAC 57.270 29.630 0.00 0.00 33.76 3.18
2044 2094 7.254227 TGTACTCACATTTAAGTTGTTGACC 57.746 36.000 0.00 0.00 0.00 4.02
2045 2095 5.418310 ACTCACATTTAAGTTGTTGACCG 57.582 39.130 0.00 0.00 0.00 4.79
2046 2096 4.879545 ACTCACATTTAAGTTGTTGACCGT 59.120 37.500 0.00 0.00 0.00 4.83
2047 2097 5.355910 ACTCACATTTAAGTTGTTGACCGTT 59.644 36.000 0.00 0.00 0.00 4.44
2048 2098 6.127842 ACTCACATTTAAGTTGTTGACCGTTT 60.128 34.615 0.00 0.00 0.00 3.60
2049 2099 6.030849 TCACATTTAAGTTGTTGACCGTTTG 58.969 36.000 0.00 0.00 0.00 2.93
2050 2100 6.030849 CACATTTAAGTTGTTGACCGTTTGA 58.969 36.000 0.00 0.00 0.00 2.69
2051 2101 6.695278 CACATTTAAGTTGTTGACCGTTTGAT 59.305 34.615 0.00 0.00 0.00 2.57
2052 2102 6.915843 ACATTTAAGTTGTTGACCGTTTGATC 59.084 34.615 0.00 0.00 0.00 2.92
2053 2103 6.687081 TTTAAGTTGTTGACCGTTTGATCT 57.313 33.333 0.00 0.00 0.00 2.75
2054 2104 4.552166 AAGTTGTTGACCGTTTGATCTG 57.448 40.909 0.00 0.00 0.00 2.90
2055 2105 3.541632 AGTTGTTGACCGTTTGATCTGT 58.458 40.909 0.00 0.00 0.00 3.41
2056 2106 3.945285 AGTTGTTGACCGTTTGATCTGTT 59.055 39.130 0.00 0.00 0.00 3.16
2057 2107 3.961477 TGTTGACCGTTTGATCTGTTG 57.039 42.857 0.00 0.00 0.00 3.33
2058 2108 3.536570 TGTTGACCGTTTGATCTGTTGA 58.463 40.909 0.00 0.00 0.00 3.18
2059 2109 4.133820 TGTTGACCGTTTGATCTGTTGAT 58.866 39.130 0.00 0.00 35.26 2.57
2060 2110 4.024133 TGTTGACCGTTTGATCTGTTGATG 60.024 41.667 0.00 0.00 32.19 3.07
2061 2111 3.738982 TGACCGTTTGATCTGTTGATGT 58.261 40.909 0.00 0.00 32.19 3.06
2062 2112 4.133820 TGACCGTTTGATCTGTTGATGTT 58.866 39.130 0.00 0.00 32.19 2.71
2063 2113 4.024133 TGACCGTTTGATCTGTTGATGTTG 60.024 41.667 0.00 0.00 32.19 3.33
2064 2114 3.882888 ACCGTTTGATCTGTTGATGTTGT 59.117 39.130 0.00 0.00 32.19 3.32
2065 2115 5.060506 ACCGTTTGATCTGTTGATGTTGTA 58.939 37.500 0.00 0.00 32.19 2.41
2066 2116 5.529430 ACCGTTTGATCTGTTGATGTTGTAA 59.471 36.000 0.00 0.00 32.19 2.41
2067 2117 6.079763 CCGTTTGATCTGTTGATGTTGTAAG 58.920 40.000 0.00 0.00 32.19 2.34
2068 2118 5.565259 CGTTTGATCTGTTGATGTTGTAAGC 59.435 40.000 0.00 0.00 32.19 3.09
2082 2132 0.110192 GTAAGCCTCGTGCAACTTGC 60.110 55.000 6.82 6.82 44.83 4.01
2102 2152 3.663464 CGATTGACATCGTTTCTGCAT 57.337 42.857 0.00 0.00 46.23 3.96
2138 2188 4.158764 TGGTCATTGTTTTGAACCGTTCTT 59.841 37.500 12.43 0.00 32.08 2.52
2220 2270 6.426328 TCTTTTCTTTTCTCTGTCAGCTGATC 59.574 38.462 21.47 13.93 0.00 2.92
2223 2273 5.176592 TCTTTTCTCTGTCAGCTGATCATG 58.823 41.667 21.47 11.12 0.00 3.07
2244 2294 0.251077 CCTGAATATGCTGGCCCTCC 60.251 60.000 0.00 0.00 0.00 4.30
2266 2316 1.943340 GCCTGCTTCAAGCTATACCAC 59.057 52.381 11.57 0.00 42.97 4.16
2270 2320 4.445453 CTGCTTCAAGCTATACCACATGA 58.555 43.478 11.57 0.00 42.97 3.07
2306 2356 8.897752 ACTTTTTAGAGAACATATTCTGCCATC 58.102 33.333 0.00 0.00 45.60 3.51
2308 2358 4.363991 AGAGAACATATTCTGCCATCCC 57.636 45.455 0.00 0.00 45.60 3.85
2309 2359 3.070018 GAGAACATATTCTGCCATCCCG 58.930 50.000 0.00 0.00 45.60 5.14
2312 2362 1.349026 ACATATTCTGCCATCCCGAGG 59.651 52.381 0.00 0.00 0.00 4.63
2321 2371 3.515502 CTGCCATCCCGAGGAGATATTTA 59.484 47.826 0.00 0.00 34.05 1.40
2332 2382 9.667107 CCCGAGGAGATATTTATTTATTTAGCA 57.333 33.333 0.00 0.00 0.00 3.49
2349 2399 6.731292 TTTAGCATTGGACTCTCTATAGCA 57.269 37.500 0.00 0.00 0.00 3.49
2370 2420 5.770162 AGCAGTCATATTAGTTTTATGGGGC 59.230 40.000 0.00 0.00 0.00 5.80
2371 2421 5.770162 GCAGTCATATTAGTTTTATGGGGCT 59.230 40.000 0.00 0.00 0.00 5.19
2372 2422 6.294176 GCAGTCATATTAGTTTTATGGGGCTG 60.294 42.308 0.00 0.00 32.08 4.85
2373 2423 5.770162 AGTCATATTAGTTTTATGGGGCTGC 59.230 40.000 0.00 0.00 0.00 5.25
2374 2424 5.770162 GTCATATTAGTTTTATGGGGCTGCT 59.230 40.000 0.00 0.00 0.00 4.24
2375 2425 6.940298 GTCATATTAGTTTTATGGGGCTGCTA 59.060 38.462 0.00 0.00 0.00 3.49
2376 2426 7.611855 GTCATATTAGTTTTATGGGGCTGCTAT 59.388 37.037 0.00 0.00 0.00 2.97
2377 2427 7.611467 TCATATTAGTTTTATGGGGCTGCTATG 59.389 37.037 0.00 0.00 0.00 2.23
2378 2428 2.310538 AGTTTTATGGGGCTGCTATGC 58.689 47.619 0.00 0.00 0.00 3.14
2379 2429 2.031120 GTTTTATGGGGCTGCTATGCA 58.969 47.619 0.00 0.00 36.92 3.96
2380 2430 2.629617 GTTTTATGGGGCTGCTATGCAT 59.370 45.455 3.79 3.79 38.13 3.96
2381 2431 2.205022 TTATGGGGCTGCTATGCATC 57.795 50.000 0.19 0.00 38.13 3.91
2382 2432 0.036105 TATGGGGCTGCTATGCATCG 60.036 55.000 0.19 0.00 38.13 3.84
2383 2433 2.670934 GGGGCTGCTATGCATCGG 60.671 66.667 0.19 0.00 38.13 4.18
2384 2434 3.360340 GGGCTGCTATGCATCGGC 61.360 66.667 0.19 10.14 38.13 5.54
2385 2435 3.360340 GGCTGCTATGCATCGGCC 61.360 66.667 19.35 19.35 39.49 6.13
2386 2436 3.720193 GCTGCTATGCATCGGCCG 61.720 66.667 22.12 22.12 38.13 6.13
2387 2437 3.046087 CTGCTATGCATCGGCCGG 61.046 66.667 27.83 11.74 38.13 6.13
2390 2440 4.662961 CTATGCATCGGCCGGCGA 62.663 66.667 27.83 20.18 40.13 5.54
2391 2441 4.228567 TATGCATCGGCCGGCGAA 62.229 61.111 27.83 12.07 40.13 4.70
2392 2442 3.529341 TATGCATCGGCCGGCGAAT 62.529 57.895 27.83 18.73 40.13 3.34
2395 2445 2.588877 CATCGGCCGGCGAATCTT 60.589 61.111 27.83 1.27 0.00 2.40
2396 2446 2.180204 CATCGGCCGGCGAATCTTT 61.180 57.895 27.83 0.85 0.00 2.52
2397 2447 1.451387 ATCGGCCGGCGAATCTTTT 60.451 52.632 27.83 0.04 0.00 2.27
2398 2448 1.029947 ATCGGCCGGCGAATCTTTTT 61.030 50.000 27.83 0.00 0.00 1.94
2399 2449 0.391395 TCGGCCGGCGAATCTTTTTA 60.391 50.000 27.83 0.00 0.00 1.52
2400 2450 0.448593 CGGCCGGCGAATCTTTTTAA 59.551 50.000 22.54 0.00 0.00 1.52
2401 2451 1.135632 CGGCCGGCGAATCTTTTTAAA 60.136 47.619 22.54 0.00 0.00 1.52
2402 2452 2.668834 CGGCCGGCGAATCTTTTTAAAA 60.669 45.455 22.54 0.00 0.00 1.52
2403 2453 2.921121 GGCCGGCGAATCTTTTTAAAAG 59.079 45.455 22.54 10.89 0.00 2.27
2404 2454 3.366577 GGCCGGCGAATCTTTTTAAAAGA 60.367 43.478 22.54 20.42 0.00 2.52
2405 2455 4.421058 GCCGGCGAATCTTTTTAAAAGAT 58.579 39.130 22.74 22.74 38.55 2.40
2406 2456 4.499399 GCCGGCGAATCTTTTTAAAAGATC 59.501 41.667 26.74 19.66 36.07 2.75
2407 2457 5.034797 CCGGCGAATCTTTTTAAAAGATCC 58.965 41.667 26.74 22.36 36.07 3.36
2408 2458 4.728608 CGGCGAATCTTTTTAAAAGATCCG 59.271 41.667 28.08 28.08 37.53 4.18
2411 2461 4.728608 CGAATCTTTTTAAAAGATCCGCCG 59.271 41.667 26.74 22.26 36.07 6.46
2412 2462 3.481112 TCTTTTTAAAAGATCCGCCGC 57.519 42.857 15.24 0.00 0.00 6.53
2413 2463 2.162809 TCTTTTTAAAAGATCCGCCGCC 59.837 45.455 15.24 0.00 0.00 6.13
2414 2464 1.828979 TTTTAAAAGATCCGCCGCCT 58.171 45.000 0.00 0.00 0.00 5.52
2415 2465 1.375551 TTTAAAAGATCCGCCGCCTC 58.624 50.000 0.00 0.00 0.00 4.70
2416 2466 0.808453 TTAAAAGATCCGCCGCCTCG 60.808 55.000 0.00 0.00 0.00 4.63
2433 2483 4.492160 GCGAGCGGTCGGATGTGA 62.492 66.667 34.69 0.00 46.91 3.58
2434 2484 2.579787 CGAGCGGTCGGATGTGAC 60.580 66.667 28.25 0.00 42.87 3.67
2435 2485 2.571757 GAGCGGTCGGATGTGACA 59.428 61.111 0.00 0.00 40.72 3.58
2436 2486 1.080093 GAGCGGTCGGATGTGACAA 60.080 57.895 0.00 0.00 40.72 3.18
2437 2487 0.669318 GAGCGGTCGGATGTGACAAA 60.669 55.000 0.00 0.00 40.72 2.83
2438 2488 0.250124 AGCGGTCGGATGTGACAAAA 60.250 50.000 0.00 0.00 40.72 2.44
2439 2489 0.802494 GCGGTCGGATGTGACAAAAT 59.198 50.000 0.00 0.00 40.72 1.82
2440 2490 1.202031 GCGGTCGGATGTGACAAAATC 60.202 52.381 0.00 0.00 40.72 2.17
2441 2491 2.073056 CGGTCGGATGTGACAAAATCA 58.927 47.619 0.00 0.00 40.72 2.57
2442 2492 2.482336 CGGTCGGATGTGACAAAATCAA 59.518 45.455 0.00 0.00 39.72 2.57
2443 2493 3.424829 CGGTCGGATGTGACAAAATCAAG 60.425 47.826 0.00 0.00 39.72 3.02
2444 2494 3.492313 GTCGGATGTGACAAAATCAAGC 58.508 45.455 0.00 0.00 39.72 4.01
2445 2495 2.159430 TCGGATGTGACAAAATCAAGCG 59.841 45.455 0.00 0.00 39.72 4.68
2446 2496 2.728846 CGGATGTGACAAAATCAAGCGG 60.729 50.000 0.00 0.00 39.72 5.52
2447 2497 2.253603 GATGTGACAAAATCAAGCGGC 58.746 47.619 0.00 0.00 39.72 6.53
2448 2498 1.317613 TGTGACAAAATCAAGCGGCT 58.682 45.000 0.00 0.00 39.72 5.52
2449 2499 2.499197 TGTGACAAAATCAAGCGGCTA 58.501 42.857 1.35 0.00 39.72 3.93
2450 2500 2.881513 TGTGACAAAATCAAGCGGCTAA 59.118 40.909 1.35 0.00 39.72 3.09
2451 2501 3.316588 TGTGACAAAATCAAGCGGCTAAA 59.683 39.130 1.35 0.00 39.72 1.85
2452 2502 3.668656 GTGACAAAATCAAGCGGCTAAAC 59.331 43.478 1.35 0.00 39.72 2.01
2453 2503 3.568007 TGACAAAATCAAGCGGCTAAACT 59.432 39.130 1.35 0.00 33.02 2.66
2454 2504 4.757657 TGACAAAATCAAGCGGCTAAACTA 59.242 37.500 1.35 0.00 33.02 2.24
2455 2505 5.239744 TGACAAAATCAAGCGGCTAAACTAA 59.760 36.000 1.35 0.00 33.02 2.24
2456 2506 6.072175 TGACAAAATCAAGCGGCTAAACTAAT 60.072 34.615 1.35 0.00 33.02 1.73
2457 2507 6.687604 ACAAAATCAAGCGGCTAAACTAATT 58.312 32.000 1.35 0.00 0.00 1.40
2458 2508 6.806739 ACAAAATCAAGCGGCTAAACTAATTC 59.193 34.615 1.35 0.00 0.00 2.17
2459 2509 5.500645 AATCAAGCGGCTAAACTAATTCC 57.499 39.130 1.35 0.00 0.00 3.01
2460 2510 4.216411 TCAAGCGGCTAAACTAATTCCT 57.784 40.909 1.35 0.00 0.00 3.36
2461 2511 4.189231 TCAAGCGGCTAAACTAATTCCTC 58.811 43.478 1.35 0.00 0.00 3.71
2462 2512 4.081087 TCAAGCGGCTAAACTAATTCCTCT 60.081 41.667 1.35 0.00 0.00 3.69
2463 2513 4.489306 AGCGGCTAAACTAATTCCTCTT 57.511 40.909 0.00 0.00 0.00 2.85
2464 2514 4.443621 AGCGGCTAAACTAATTCCTCTTC 58.556 43.478 0.00 0.00 0.00 2.87
2465 2515 4.162509 AGCGGCTAAACTAATTCCTCTTCT 59.837 41.667 0.00 0.00 0.00 2.85
2466 2516 4.876679 GCGGCTAAACTAATTCCTCTTCTT 59.123 41.667 0.00 0.00 0.00 2.52
2467 2517 5.354513 GCGGCTAAACTAATTCCTCTTCTTT 59.645 40.000 0.00 0.00 0.00 2.52
2468 2518 6.675728 GCGGCTAAACTAATTCCTCTTCTTTG 60.676 42.308 0.00 0.00 0.00 2.77
2469 2519 6.556212 GGCTAAACTAATTCCTCTTCTTTGC 58.444 40.000 0.00 0.00 0.00 3.68
2470 2520 6.151144 GGCTAAACTAATTCCTCTTCTTTGCA 59.849 38.462 0.00 0.00 0.00 4.08
2471 2521 7.309194 GGCTAAACTAATTCCTCTTCTTTGCAA 60.309 37.037 0.00 0.00 0.00 4.08
2472 2522 7.539022 GCTAAACTAATTCCTCTTCTTTGCAAC 59.461 37.037 0.00 0.00 0.00 4.17
2473 2523 6.959639 AACTAATTCCTCTTCTTTGCAACA 57.040 33.333 0.00 0.00 0.00 3.33
2474 2524 6.959639 ACTAATTCCTCTTCTTTGCAACAA 57.040 33.333 0.00 0.00 0.00 2.83
2475 2525 7.346751 ACTAATTCCTCTTCTTTGCAACAAA 57.653 32.000 0.00 0.00 0.00 2.83
2476 2526 7.955918 ACTAATTCCTCTTCTTTGCAACAAAT 58.044 30.769 0.00 0.00 0.00 2.32
2477 2527 8.084684 ACTAATTCCTCTTCTTTGCAACAAATC 58.915 33.333 0.00 0.00 0.00 2.17
2478 2528 6.661304 ATTCCTCTTCTTTGCAACAAATCT 57.339 33.333 0.00 0.00 0.00 2.40
2479 2529 7.765695 ATTCCTCTTCTTTGCAACAAATCTA 57.234 32.000 0.00 0.00 0.00 1.98
2480 2530 7.765695 TTCCTCTTCTTTGCAACAAATCTAT 57.234 32.000 0.00 0.00 0.00 1.98
2481 2531 7.765695 TCCTCTTCTTTGCAACAAATCTATT 57.234 32.000 0.00 0.00 0.00 1.73
2482 2532 8.862325 TCCTCTTCTTTGCAACAAATCTATTA 57.138 30.769 0.00 0.00 0.00 0.98
2483 2533 9.466497 TCCTCTTCTTTGCAACAAATCTATTAT 57.534 29.630 0.00 0.00 0.00 1.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.492782 ACTCATTTCTCTCTCATATGTCCATTT 58.507 33.333 1.90 0.00 0.00 2.32
1 2 8.032045 ACTCATTTCTCTCTCATATGTCCATT 57.968 34.615 1.90 0.00 0.00 3.16
2 3 7.615039 ACTCATTTCTCTCTCATATGTCCAT 57.385 36.000 1.90 0.00 0.00 3.41
3 4 7.429374 AACTCATTTCTCTCTCATATGTCCA 57.571 36.000 1.90 0.00 0.00 4.02
4 5 7.984050 TGAAACTCATTTCTCTCTCATATGTCC 59.016 37.037 1.90 0.00 44.02 4.02
5 6 8.939201 TGAAACTCATTTCTCTCTCATATGTC 57.061 34.615 1.90 0.00 44.02 3.06
6 7 8.538701 ACTGAAACTCATTTCTCTCTCATATGT 58.461 33.333 1.90 0.00 44.02 2.29
7 8 8.819015 CACTGAAACTCATTTCTCTCTCATATG 58.181 37.037 0.00 0.00 44.02 1.78
8 9 8.756927 TCACTGAAACTCATTTCTCTCTCATAT 58.243 33.333 1.82 0.00 44.02 1.78
9 10 8.127150 TCACTGAAACTCATTTCTCTCTCATA 57.873 34.615 1.82 0.00 44.02 2.15
10 11 7.002250 TCACTGAAACTCATTTCTCTCTCAT 57.998 36.000 1.82 0.00 44.02 2.90
11 12 6.410942 TCACTGAAACTCATTTCTCTCTCA 57.589 37.500 1.82 0.00 44.02 3.27
12 13 7.601886 TGAATCACTGAAACTCATTTCTCTCTC 59.398 37.037 1.82 0.00 44.02 3.20
13 14 7.448420 TGAATCACTGAAACTCATTTCTCTCT 58.552 34.615 1.82 0.00 44.02 3.10
14 15 7.664082 TGAATCACTGAAACTCATTTCTCTC 57.336 36.000 1.82 0.00 44.02 3.20
15 16 8.632906 AATGAATCACTGAAACTCATTTCTCT 57.367 30.769 7.88 0.00 44.02 3.10
68 69 3.508762 AGTACTAGTACAACGCATGTGC 58.491 45.455 29.87 3.59 43.77 4.57
69 70 4.982999 AGAGTACTAGTACAACGCATGTG 58.017 43.478 29.87 4.30 43.77 3.21
70 71 6.748333 TTAGAGTACTAGTACAACGCATGT 57.252 37.500 29.87 12.70 46.36 3.21
71 72 7.701078 ACATTTAGAGTACTAGTACAACGCATG 59.299 37.037 29.87 24.84 38.48 4.06
72 73 7.769220 ACATTTAGAGTACTAGTACAACGCAT 58.231 34.615 29.87 15.61 38.48 4.73
73 74 7.149569 ACATTTAGAGTACTAGTACAACGCA 57.850 36.000 29.87 14.23 38.48 5.24
74 75 9.727627 ATAACATTTAGAGTACTAGTACAACGC 57.272 33.333 29.87 17.63 38.48 4.84
94 95 9.850628 CATGAAGAAAATGTCACTCAATAACAT 57.149 29.630 0.00 0.00 35.20 2.71
95 96 8.849168 ACATGAAGAAAATGTCACTCAATAACA 58.151 29.630 0.00 0.00 32.83 2.41
96 97 9.683069 AACATGAAGAAAATGTCACTCAATAAC 57.317 29.630 0.00 0.00 37.27 1.89
99 100 9.850628 CATAACATGAAGAAAATGTCACTCAAT 57.149 29.630 0.00 0.00 37.27 2.57
100 101 7.809331 GCATAACATGAAGAAAATGTCACTCAA 59.191 33.333 0.00 0.00 37.27 3.02
101 102 7.175467 AGCATAACATGAAGAAAATGTCACTCA 59.825 33.333 0.00 0.00 37.27 3.41
102 103 7.533426 AGCATAACATGAAGAAAATGTCACTC 58.467 34.615 0.00 0.00 37.27 3.51
103 104 7.458409 AGCATAACATGAAGAAAATGTCACT 57.542 32.000 0.00 0.00 37.27 3.41
104 105 8.524870 AAAGCATAACATGAAGAAAATGTCAC 57.475 30.769 0.00 0.00 37.27 3.67
105 106 8.980610 CAAAAGCATAACATGAAGAAAATGTCA 58.019 29.630 0.00 0.00 37.27 3.58
106 107 8.981647 ACAAAAGCATAACATGAAGAAAATGTC 58.018 29.630 0.00 0.00 37.27 3.06
107 108 8.891671 ACAAAAGCATAACATGAAGAAAATGT 57.108 26.923 0.00 0.00 39.95 2.71
108 109 8.980610 TGACAAAAGCATAACATGAAGAAAATG 58.019 29.630 0.00 0.00 0.00 2.32
109 110 9.715121 ATGACAAAAGCATAACATGAAGAAAAT 57.285 25.926 0.00 0.00 0.00 1.82
110 111 9.195411 GATGACAAAAGCATAACATGAAGAAAA 57.805 29.630 0.00 0.00 0.00 2.29
111 112 7.538334 CGATGACAAAAGCATAACATGAAGAAA 59.462 33.333 0.00 0.00 0.00 2.52
112 113 7.022979 CGATGACAAAAGCATAACATGAAGAA 58.977 34.615 0.00 0.00 0.00 2.52
113 114 6.149308 ACGATGACAAAAGCATAACATGAAGA 59.851 34.615 0.00 0.00 0.00 2.87
114 115 6.249893 CACGATGACAAAAGCATAACATGAAG 59.750 38.462 0.00 0.00 0.00 3.02
115 116 6.085573 CACGATGACAAAAGCATAACATGAA 58.914 36.000 0.00 0.00 0.00 2.57
116 117 5.181056 ACACGATGACAAAAGCATAACATGA 59.819 36.000 0.00 0.00 0.00 3.07
117 118 5.393124 ACACGATGACAAAAGCATAACATG 58.607 37.500 0.00 0.00 0.00 3.21
118 119 5.181056 TGACACGATGACAAAAGCATAACAT 59.819 36.000 0.00 0.00 0.00 2.71
119 120 4.513318 TGACACGATGACAAAAGCATAACA 59.487 37.500 0.00 0.00 0.00 2.41
120 121 5.029650 TGACACGATGACAAAAGCATAAC 57.970 39.130 0.00 0.00 0.00 1.89
121 122 5.681337 TTGACACGATGACAAAAGCATAA 57.319 34.783 0.00 0.00 29.87 1.90
122 123 5.681337 TTTGACACGATGACAAAAGCATA 57.319 34.783 10.96 0.00 38.60 3.14
123 124 4.566545 TTTGACACGATGACAAAAGCAT 57.433 36.364 10.96 0.00 38.60 3.79
124 125 4.362932 TTTTGACACGATGACAAAAGCA 57.637 36.364 17.06 4.32 43.22 3.91
161 162 8.512138 CGTAGGTCTTGGATTTTTGTTCTTTAT 58.488 33.333 0.00 0.00 0.00 1.40
162 163 7.716123 TCGTAGGTCTTGGATTTTTGTTCTTTA 59.284 33.333 0.00 0.00 0.00 1.85
163 164 6.544564 TCGTAGGTCTTGGATTTTTGTTCTTT 59.455 34.615 0.00 0.00 0.00 2.52
164 165 6.059484 TCGTAGGTCTTGGATTTTTGTTCTT 58.941 36.000 0.00 0.00 0.00 2.52
165 166 5.617252 TCGTAGGTCTTGGATTTTTGTTCT 58.383 37.500 0.00 0.00 0.00 3.01
166 167 5.469084 ACTCGTAGGTCTTGGATTTTTGTTC 59.531 40.000 0.00 0.00 0.00 3.18
167 168 5.374071 ACTCGTAGGTCTTGGATTTTTGTT 58.626 37.500 0.00 0.00 0.00 2.83
168 169 4.969484 ACTCGTAGGTCTTGGATTTTTGT 58.031 39.130 0.00 0.00 0.00 2.83
169 170 5.238583 AGACTCGTAGGTCTTGGATTTTTG 58.761 41.667 0.00 0.00 43.14 2.44
170 171 5.485209 AGACTCGTAGGTCTTGGATTTTT 57.515 39.130 0.00 0.00 43.14 1.94
171 172 6.793505 ATAGACTCGTAGGTCTTGGATTTT 57.206 37.500 11.92 0.00 43.14 1.82
172 173 9.584008 TTATATAGACTCGTAGGTCTTGGATTT 57.416 33.333 11.92 2.00 43.14 2.17
173 174 9.012161 GTTATATAGACTCGTAGGTCTTGGATT 57.988 37.037 11.92 0.86 43.14 3.01
174 175 8.384718 AGTTATATAGACTCGTAGGTCTTGGAT 58.615 37.037 11.92 5.07 43.14 3.41
175 176 7.743749 AGTTATATAGACTCGTAGGTCTTGGA 58.256 38.462 11.92 0.00 43.14 3.53
176 177 7.879160 AGAGTTATATAGACTCGTAGGTCTTGG 59.121 40.741 11.92 0.00 46.29 3.61
177 178 8.836268 AGAGTTATATAGACTCGTAGGTCTTG 57.164 38.462 11.92 0.00 46.29 3.02
179 180 9.927668 GTAAGAGTTATATAGACTCGTAGGTCT 57.072 37.037 14.62 11.54 46.29 3.85
180 181 9.703892 TGTAAGAGTTATATAGACTCGTAGGTC 57.296 37.037 14.62 0.00 46.29 3.85
218 219 9.475620 GGGGGAGAGATTATTAAGAAAAGAAAA 57.524 33.333 0.00 0.00 0.00 2.29
219 220 8.846804 AGGGGGAGAGATTATTAAGAAAAGAAA 58.153 33.333 0.00 0.00 0.00 2.52
220 221 8.275040 CAGGGGGAGAGATTATTAAGAAAAGAA 58.725 37.037 0.00 0.00 0.00 2.52
221 222 7.627697 TCAGGGGGAGAGATTATTAAGAAAAGA 59.372 37.037 0.00 0.00 0.00 2.52
222 223 7.806180 TCAGGGGGAGAGATTATTAAGAAAAG 58.194 38.462 0.00 0.00 0.00 2.27
223 224 7.765149 TCAGGGGGAGAGATTATTAAGAAAA 57.235 36.000 0.00 0.00 0.00 2.29
224 225 7.765149 TTCAGGGGGAGAGATTATTAAGAAA 57.235 36.000 0.00 0.00 0.00 2.52
225 226 7.954539 ATTCAGGGGGAGAGATTATTAAGAA 57.045 36.000 0.00 0.00 0.00 2.52
226 227 7.954539 AATTCAGGGGGAGAGATTATTAAGA 57.045 36.000 0.00 0.00 0.00 2.10
230 231 8.007153 CCTTAAAATTCAGGGGGAGAGATTATT 58.993 37.037 0.00 0.00 0.00 1.40
231 232 7.131069 ACCTTAAAATTCAGGGGGAGAGATTAT 59.869 37.037 0.00 0.00 34.02 1.28
232 233 6.450352 ACCTTAAAATTCAGGGGGAGAGATTA 59.550 38.462 0.00 0.00 34.02 1.75
233 234 5.256389 ACCTTAAAATTCAGGGGGAGAGATT 59.744 40.000 0.00 0.00 34.02 2.40
234 235 4.796265 ACCTTAAAATTCAGGGGGAGAGAT 59.204 41.667 0.00 0.00 34.02 2.75
235 236 4.018415 CACCTTAAAATTCAGGGGGAGAGA 60.018 45.833 0.00 0.00 34.02 3.10
236 237 4.273318 CACCTTAAAATTCAGGGGGAGAG 58.727 47.826 0.00 0.00 34.02 3.20
237 238 4.316025 CACCTTAAAATTCAGGGGGAGA 57.684 45.455 0.00 0.00 34.02 3.71
242 243 1.831106 GCCCCACCTTAAAATTCAGGG 59.169 52.381 0.00 0.00 34.02 4.45
243 244 2.534990 TGCCCCACCTTAAAATTCAGG 58.465 47.619 0.00 0.00 36.10 3.86
244 245 4.615588 TTTGCCCCACCTTAAAATTCAG 57.384 40.909 0.00 0.00 0.00 3.02
245 246 4.019771 GGATTTGCCCCACCTTAAAATTCA 60.020 41.667 0.00 0.00 0.00 2.57
246 247 4.513442 GGATTTGCCCCACCTTAAAATTC 58.487 43.478 0.00 0.00 0.00 2.17
247 248 4.568072 GGATTTGCCCCACCTTAAAATT 57.432 40.909 0.00 0.00 0.00 1.82
259 260 8.851390 ACTATCATTAGTTGGGGGATTTGCCC 62.851 46.154 0.00 0.00 45.41 5.36
260 261 2.745968 TCATTAGTTGGGGGATTTGCC 58.254 47.619 0.00 0.00 0.00 4.52
261 262 5.140454 ACTATCATTAGTTGGGGGATTTGC 58.860 41.667 0.00 0.00 34.99 3.68
262 263 5.770162 GGACTATCATTAGTTGGGGGATTTG 59.230 44.000 0.00 0.00 38.81 2.32
263 264 5.676811 AGGACTATCATTAGTTGGGGGATTT 59.323 40.000 0.00 0.00 38.81 2.17
264 265 5.235534 AGGACTATCATTAGTTGGGGGATT 58.764 41.667 0.00 0.00 38.81 3.01
265 266 4.844348 AGGACTATCATTAGTTGGGGGAT 58.156 43.478 0.00 0.00 38.81 3.85
266 267 4.232091 GAGGACTATCATTAGTTGGGGGA 58.768 47.826 0.00 0.00 38.81 4.81
267 268 3.328050 GGAGGACTATCATTAGTTGGGGG 59.672 52.174 0.00 0.00 38.81 5.40
268 269 3.973973 TGGAGGACTATCATTAGTTGGGG 59.026 47.826 0.00 0.00 38.81 4.96
269 270 5.630415 TTGGAGGACTATCATTAGTTGGG 57.370 43.478 0.00 0.00 38.81 4.12
270 271 7.282585 TGATTTGGAGGACTATCATTAGTTGG 58.717 38.462 0.00 0.00 38.81 3.77
271 272 7.041508 GCTGATTTGGAGGACTATCATTAGTTG 60.042 40.741 0.00 0.00 38.81 3.16
272 273 6.995091 GCTGATTTGGAGGACTATCATTAGTT 59.005 38.462 0.00 0.00 38.81 2.24
273 274 6.465035 GGCTGATTTGGAGGACTATCATTAGT 60.465 42.308 0.00 0.00 41.45 2.24
274 275 5.936956 GGCTGATTTGGAGGACTATCATTAG 59.063 44.000 0.00 0.00 0.00 1.73
275 276 5.221925 GGGCTGATTTGGAGGACTATCATTA 60.222 44.000 0.00 0.00 0.00 1.90
276 277 4.446889 GGGCTGATTTGGAGGACTATCATT 60.447 45.833 0.00 0.00 0.00 2.57
277 278 3.073650 GGGCTGATTTGGAGGACTATCAT 59.926 47.826 0.00 0.00 0.00 2.45
278 279 2.439507 GGGCTGATTTGGAGGACTATCA 59.560 50.000 0.00 0.00 0.00 2.15
279 280 2.224646 GGGGCTGATTTGGAGGACTATC 60.225 54.545 0.00 0.00 0.00 2.08
280 281 1.777272 GGGGCTGATTTGGAGGACTAT 59.223 52.381 0.00 0.00 0.00 2.12
281 282 1.213296 GGGGCTGATTTGGAGGACTA 58.787 55.000 0.00 0.00 0.00 2.59
282 283 1.915078 CGGGGCTGATTTGGAGGACT 61.915 60.000 0.00 0.00 0.00 3.85
283 284 1.452108 CGGGGCTGATTTGGAGGAC 60.452 63.158 0.00 0.00 0.00 3.85
284 285 1.615124 TCGGGGCTGATTTGGAGGA 60.615 57.895 0.00 0.00 0.00 3.71
285 286 1.452108 GTCGGGGCTGATTTGGAGG 60.452 63.158 0.00 0.00 0.00 4.30
286 287 1.815421 CGTCGGGGCTGATTTGGAG 60.815 63.158 0.00 0.00 0.00 3.86
287 288 1.259142 TACGTCGGGGCTGATTTGGA 61.259 55.000 0.00 0.00 0.00 3.53
288 289 0.391927 TTACGTCGGGGCTGATTTGG 60.392 55.000 0.00 0.00 0.00 3.28
289 290 0.725117 GTTACGTCGGGGCTGATTTG 59.275 55.000 0.00 0.00 0.00 2.32
290 291 0.322322 TGTTACGTCGGGGCTGATTT 59.678 50.000 0.00 0.00 0.00 2.17
291 292 0.539986 ATGTTACGTCGGGGCTGATT 59.460 50.000 0.00 0.00 0.00 2.57
292 293 1.068127 GTATGTTACGTCGGGGCTGAT 59.932 52.381 0.00 0.00 0.00 2.90
293 294 0.457035 GTATGTTACGTCGGGGCTGA 59.543 55.000 0.00 0.00 0.00 4.26
294 295 0.868602 CGTATGTTACGTCGGGGCTG 60.869 60.000 0.00 0.00 46.41 4.85
295 296 1.434696 CGTATGTTACGTCGGGGCT 59.565 57.895 0.00 0.00 46.41 5.19
296 297 4.002037 CGTATGTTACGTCGGGGC 57.998 61.111 0.00 0.00 46.41 5.80
304 305 9.383462 CTACATGATGTTCTCTACGTATGTTAC 57.617 37.037 2.29 0.00 30.11 2.50
305 306 9.333724 TCTACATGATGTTCTCTACGTATGTTA 57.666 33.333 2.29 0.00 30.11 2.41
306 307 8.221965 TCTACATGATGTTCTCTACGTATGTT 57.778 34.615 2.29 0.00 30.11 2.71
307 308 7.803279 TCTACATGATGTTCTCTACGTATGT 57.197 36.000 2.29 0.00 31.24 2.29
308 309 8.666580 CATCTACATGATGTTCTCTACGTATG 57.333 38.462 2.29 0.00 45.55 2.39
322 323 9.433153 CATAGAGCAATGTTACATCTACATGAT 57.567 33.333 0.00 0.00 36.41 2.45
323 324 8.424133 ACATAGAGCAATGTTACATCTACATGA 58.576 33.333 0.00 0.00 36.71 3.07
324 325 8.599055 ACATAGAGCAATGTTACATCTACATG 57.401 34.615 0.00 0.00 36.71 3.21
332 333 9.062524 ACTGTTTTTACATAGAGCAATGTTACA 57.937 29.630 4.91 0.00 40.52 2.41
333 334 9.893305 AACTGTTTTTACATAGAGCAATGTTAC 57.107 29.630 4.91 1.58 40.52 2.50
334 335 9.891828 CAACTGTTTTTACATAGAGCAATGTTA 57.108 29.630 4.91 0.00 40.52 2.41
335 336 7.867403 CCAACTGTTTTTACATAGAGCAATGTT 59.133 33.333 4.91 0.00 40.52 2.71
336 337 7.230510 TCCAACTGTTTTTACATAGAGCAATGT 59.769 33.333 4.97 4.97 42.62 2.71
337 338 7.592938 TCCAACTGTTTTTACATAGAGCAATG 58.407 34.615 0.00 0.00 0.00 2.82
338 339 7.448469 ACTCCAACTGTTTTTACATAGAGCAAT 59.552 33.333 0.00 0.00 0.00 3.56
339 340 6.770785 ACTCCAACTGTTTTTACATAGAGCAA 59.229 34.615 0.00 0.00 0.00 3.91
340 341 6.296026 ACTCCAACTGTTTTTACATAGAGCA 58.704 36.000 0.00 0.00 0.00 4.26
341 342 6.803154 ACTCCAACTGTTTTTACATAGAGC 57.197 37.500 0.00 0.00 0.00 4.09
342 343 7.811236 TCGTACTCCAACTGTTTTTACATAGAG 59.189 37.037 0.00 0.00 0.00 2.43
343 344 7.660112 TCGTACTCCAACTGTTTTTACATAGA 58.340 34.615 0.00 0.00 0.00 1.98
344 345 7.878477 TCGTACTCCAACTGTTTTTACATAG 57.122 36.000 0.00 0.00 0.00 2.23
345 346 9.926158 TTATCGTACTCCAACTGTTTTTACATA 57.074 29.630 0.00 0.00 0.00 2.29
346 347 8.836268 TTATCGTACTCCAACTGTTTTTACAT 57.164 30.769 0.00 0.00 0.00 2.29
347 348 8.836268 ATTATCGTACTCCAACTGTTTTTACA 57.164 30.769 0.00 0.00 0.00 2.41
348 349 8.385858 GGATTATCGTACTCCAACTGTTTTTAC 58.614 37.037 0.00 0.00 0.00 2.01
349 350 8.316214 AGGATTATCGTACTCCAACTGTTTTTA 58.684 33.333 1.37 0.00 0.00 1.52
350 351 7.166167 AGGATTATCGTACTCCAACTGTTTTT 58.834 34.615 1.37 0.00 0.00 1.94
351 352 6.708285 AGGATTATCGTACTCCAACTGTTTT 58.292 36.000 1.37 0.00 0.00 2.43
352 353 6.295719 AGGATTATCGTACTCCAACTGTTT 57.704 37.500 1.37 0.00 0.00 2.83
353 354 5.934402 AGGATTATCGTACTCCAACTGTT 57.066 39.130 1.37 0.00 0.00 3.16
354 355 8.880991 ATATAGGATTATCGTACTCCAACTGT 57.119 34.615 0.00 0.00 0.00 3.55
355 356 8.407064 GGATATAGGATTATCGTACTCCAACTG 58.593 40.741 14.97 0.00 29.43 3.16
356 357 8.114102 TGGATATAGGATTATCGTACTCCAACT 58.886 37.037 17.97 0.00 33.09 3.16
357 358 8.289939 TGGATATAGGATTATCGTACTCCAAC 57.710 38.462 17.97 2.86 33.09 3.77
358 359 8.114102 ACTGGATATAGGATTATCGTACTCCAA 58.886 37.037 19.48 10.33 34.41 3.53
359 360 7.640313 ACTGGATATAGGATTATCGTACTCCA 58.360 38.462 18.62 18.62 34.04 3.86
360 361 9.275398 CTACTGGATATAGGATTATCGTACTCC 57.725 40.741 13.82 13.82 30.69 3.85
363 364 8.776470 GCTCTACTGGATATAGGATTATCGTAC 58.224 40.741 0.00 0.00 30.69 3.67
364 365 8.715842 AGCTCTACTGGATATAGGATTATCGTA 58.284 37.037 0.00 0.00 30.69 3.43
365 366 7.579105 AGCTCTACTGGATATAGGATTATCGT 58.421 38.462 0.00 0.00 30.69 3.73
366 367 8.995220 GTAGCTCTACTGGATATAGGATTATCG 58.005 40.741 0.00 0.00 33.45 2.92
367 368 8.995220 CGTAGCTCTACTGGATATAGGATTATC 58.005 40.741 0.00 0.00 34.04 1.75
368 369 8.715842 TCGTAGCTCTACTGGATATAGGATTAT 58.284 37.037 0.00 0.00 34.04 1.28
369 370 8.087303 TCGTAGCTCTACTGGATATAGGATTA 57.913 38.462 0.00 0.00 34.04 1.75
370 371 6.959904 TCGTAGCTCTACTGGATATAGGATT 58.040 40.000 0.00 0.00 34.04 3.01
371 372 6.563037 TCGTAGCTCTACTGGATATAGGAT 57.437 41.667 0.00 0.00 34.04 3.24
372 373 6.370186 TTCGTAGCTCTACTGGATATAGGA 57.630 41.667 0.00 0.00 34.04 2.94
373 374 6.094325 CCTTTCGTAGCTCTACTGGATATAGG 59.906 46.154 0.00 0.00 34.04 2.57
374 375 6.655848 ACCTTTCGTAGCTCTACTGGATATAG 59.344 42.308 0.00 0.00 34.04 1.31
375 376 6.540995 ACCTTTCGTAGCTCTACTGGATATA 58.459 40.000 0.00 0.00 34.04 0.86
376 377 5.386924 ACCTTTCGTAGCTCTACTGGATAT 58.613 41.667 0.00 0.00 34.04 1.63
377 378 4.789807 ACCTTTCGTAGCTCTACTGGATA 58.210 43.478 0.00 0.00 34.04 2.59
378 379 3.633418 ACCTTTCGTAGCTCTACTGGAT 58.367 45.455 0.00 0.00 34.04 3.41
379 380 3.083122 ACCTTTCGTAGCTCTACTGGA 57.917 47.619 0.00 0.00 34.04 3.86
380 381 3.870633 AACCTTTCGTAGCTCTACTGG 57.129 47.619 0.00 5.14 34.04 4.00
381 382 6.154445 TGTAAAACCTTTCGTAGCTCTACTG 58.846 40.000 0.00 0.50 34.04 2.74
382 383 6.336842 TGTAAAACCTTTCGTAGCTCTACT 57.663 37.500 0.00 0.00 34.04 2.57
383 384 8.693542 TTATGTAAAACCTTTCGTAGCTCTAC 57.306 34.615 0.00 0.00 0.00 2.59
384 385 9.525409 GATTATGTAAAACCTTTCGTAGCTCTA 57.475 33.333 0.00 0.00 0.00 2.43
385 386 8.258708 AGATTATGTAAAACCTTTCGTAGCTCT 58.741 33.333 0.00 0.00 0.00 4.09
386 387 8.421673 AGATTATGTAAAACCTTTCGTAGCTC 57.578 34.615 0.00 0.00 0.00 4.09
387 388 8.788325 AAGATTATGTAAAACCTTTCGTAGCT 57.212 30.769 0.00 0.00 0.00 3.32
388 389 9.486857 GAAAGATTATGTAAAACCTTTCGTAGC 57.513 33.333 0.00 0.00 0.00 3.58
403 404 8.827677 GCCGACAAGTATTTAGAAAGATTATGT 58.172 33.333 0.00 0.00 0.00 2.29
404 405 8.283291 GGCCGACAAGTATTTAGAAAGATTATG 58.717 37.037 0.00 0.00 0.00 1.90
405 406 7.444487 GGGCCGACAAGTATTTAGAAAGATTAT 59.556 37.037 0.00 0.00 0.00 1.28
406 407 6.764560 GGGCCGACAAGTATTTAGAAAGATTA 59.235 38.462 0.00 0.00 0.00 1.75
407 408 5.589050 GGGCCGACAAGTATTTAGAAAGATT 59.411 40.000 0.00 0.00 0.00 2.40
408 409 5.123936 GGGCCGACAAGTATTTAGAAAGAT 58.876 41.667 0.00 0.00 0.00 2.40
409 410 4.510571 GGGCCGACAAGTATTTAGAAAGA 58.489 43.478 0.00 0.00 0.00 2.52
410 411 3.626217 GGGGCCGACAAGTATTTAGAAAG 59.374 47.826 0.00 0.00 0.00 2.62
411 412 3.613030 GGGGCCGACAAGTATTTAGAAA 58.387 45.455 0.00 0.00 0.00 2.52
412 413 2.092807 GGGGGCCGACAAGTATTTAGAA 60.093 50.000 0.00 0.00 0.00 2.10
413 414 1.487558 GGGGGCCGACAAGTATTTAGA 59.512 52.381 0.00 0.00 0.00 2.10
414 415 1.489230 AGGGGGCCGACAAGTATTTAG 59.511 52.381 0.00 0.00 0.00 1.85
415 416 1.587066 AGGGGGCCGACAAGTATTTA 58.413 50.000 0.00 0.00 0.00 1.40
416 417 0.702316 AAGGGGGCCGACAAGTATTT 59.298 50.000 0.00 0.00 0.00 1.40
417 418 0.034477 CAAGGGGGCCGACAAGTATT 60.034 55.000 0.00 0.00 0.00 1.89
418 419 0.912487 TCAAGGGGGCCGACAAGTAT 60.912 55.000 0.00 0.00 0.00 2.12
419 420 1.128809 TTCAAGGGGGCCGACAAGTA 61.129 55.000 0.00 0.00 0.00 2.24
420 421 1.789576 ATTCAAGGGGGCCGACAAGT 61.790 55.000 0.00 0.00 0.00 3.16
421 422 0.611896 AATTCAAGGGGGCCGACAAG 60.612 55.000 0.00 0.00 0.00 3.16
422 423 0.178947 AAATTCAAGGGGGCCGACAA 60.179 50.000 0.00 0.00 0.00 3.18
423 424 0.610785 GAAATTCAAGGGGGCCGACA 60.611 55.000 0.00 0.00 0.00 4.35
424 425 0.610785 TGAAATTCAAGGGGGCCGAC 60.611 55.000 0.00 0.00 0.00 4.79
425 426 0.323360 CTGAAATTCAAGGGGGCCGA 60.323 55.000 0.00 0.00 0.00 5.54
426 427 1.322538 CCTGAAATTCAAGGGGGCCG 61.323 60.000 0.00 0.00 0.00 6.13
427 428 0.252239 ACCTGAAATTCAAGGGGGCC 60.252 55.000 13.34 0.00 0.00 5.80
428 429 0.897621 CACCTGAAATTCAAGGGGGC 59.102 55.000 13.34 0.00 0.00 5.80
429 430 1.895131 CACACCTGAAATTCAAGGGGG 59.105 52.381 14.90 9.52 0.00 5.40
430 431 2.297033 CACACACCTGAAATTCAAGGGG 59.703 50.000 10.70 10.70 0.00 4.79
431 432 2.297033 CCACACACCTGAAATTCAAGGG 59.703 50.000 13.34 7.76 0.00 3.95
432 433 2.297033 CCCACACACCTGAAATTCAAGG 59.703 50.000 0.00 3.78 0.00 3.61
433 434 2.297033 CCCCACACACCTGAAATTCAAG 59.703 50.000 0.00 0.00 0.00 3.02
434 435 2.315176 CCCCACACACCTGAAATTCAA 58.685 47.619 0.00 0.00 0.00 2.69
435 436 1.993956 CCCCACACACCTGAAATTCA 58.006 50.000 0.00 0.00 0.00 2.57
436 437 0.603065 GCCCCACACACCTGAAATTC 59.397 55.000 0.00 0.00 0.00 2.17
437 438 0.831711 GGCCCCACACACCTGAAATT 60.832 55.000 0.00 0.00 0.00 1.82
438 439 1.228862 GGCCCCACACACCTGAAAT 60.229 57.895 0.00 0.00 0.00 2.17
439 440 2.197324 GGCCCCACACACCTGAAA 59.803 61.111 0.00 0.00 0.00 2.69
440 441 3.897122 GGGCCCCACACACCTGAA 61.897 66.667 12.23 0.00 0.00 3.02
444 445 4.233558 AAAGGGGCCCCACACACC 62.234 66.667 42.48 14.27 38.92 4.16
445 446 2.600470 GAAAGGGGCCCCACACAC 60.600 66.667 42.48 23.39 38.92 3.82
446 447 2.780924 AGAAAGGGGCCCCACACA 60.781 61.111 42.48 0.00 38.92 3.72
447 448 2.035783 GAGAAAGGGGCCCCACAC 59.964 66.667 42.48 29.54 38.92 3.82
448 449 3.264845 GGAGAAAGGGGCCCCACA 61.265 66.667 42.48 0.00 38.92 4.17
449 450 2.941583 AGGAGAAAGGGGCCCCAC 60.942 66.667 42.48 30.25 38.92 4.61
450 451 2.614013 GAGGAGAAAGGGGCCCCA 60.614 66.667 42.48 0.00 38.92 4.96
451 452 3.421386 GGAGGAGAAAGGGGCCCC 61.421 72.222 35.90 35.90 0.00 5.80
452 453 1.927569 GAAGGAGGAGAAAGGGGCCC 61.928 65.000 17.12 17.12 0.00 5.80
453 454 1.610327 GAAGGAGGAGAAAGGGGCC 59.390 63.158 0.00 0.00 0.00 5.80
454 455 1.610327 GGAAGGAGGAGAAAGGGGC 59.390 63.158 0.00 0.00 0.00 5.80
455 456 1.282653 GGGGAAGGAGGAGAAAGGGG 61.283 65.000 0.00 0.00 0.00 4.79
456 457 0.550147 TGGGGAAGGAGGAGAAAGGG 60.550 60.000 0.00 0.00 0.00 3.95
457 458 1.372501 TTGGGGAAGGAGGAGAAAGG 58.627 55.000 0.00 0.00 0.00 3.11
458 459 2.578021 TCATTGGGGAAGGAGGAGAAAG 59.422 50.000 0.00 0.00 0.00 2.62
459 460 2.642982 TCATTGGGGAAGGAGGAGAAA 58.357 47.619 0.00 0.00 0.00 2.52
460 461 2.359376 TCATTGGGGAAGGAGGAGAA 57.641 50.000 0.00 0.00 0.00 2.87
461 462 2.200081 CTTCATTGGGGAAGGAGGAGA 58.800 52.381 0.00 0.00 40.44 3.71
462 463 2.200081 TCTTCATTGGGGAAGGAGGAG 58.800 52.381 3.37 0.00 43.52 3.69
463 464 2.359376 TCTTCATTGGGGAAGGAGGA 57.641 50.000 3.37 0.00 43.52 3.71
464 465 3.677156 AATCTTCATTGGGGAAGGAGG 57.323 47.619 3.37 0.00 43.52 4.30
465 466 4.140536 GCTAATCTTCATTGGGGAAGGAG 58.859 47.826 3.37 1.17 43.52 3.69
466 467 3.117512 GGCTAATCTTCATTGGGGAAGGA 60.118 47.826 3.37 0.00 43.52 3.36
467 468 3.225940 GGCTAATCTTCATTGGGGAAGG 58.774 50.000 3.37 0.00 43.52 3.46
468 469 3.633986 GTGGCTAATCTTCATTGGGGAAG 59.366 47.826 0.00 0.00 44.46 3.46
469 470 3.631250 GTGGCTAATCTTCATTGGGGAA 58.369 45.455 0.00 0.00 0.00 3.97
470 471 2.421388 CGTGGCTAATCTTCATTGGGGA 60.421 50.000 0.00 0.00 0.00 4.81
471 472 1.949525 CGTGGCTAATCTTCATTGGGG 59.050 52.381 0.00 0.00 0.00 4.96
472 473 2.643551 ACGTGGCTAATCTTCATTGGG 58.356 47.619 0.00 0.00 0.00 4.12
511 512 7.776500 TGCTACACCTACATAGTGATAGTTACA 59.224 37.037 0.00 0.00 38.63 2.41
513 514 8.935614 ATGCTACACCTACATAGTGATAGTTA 57.064 34.615 0.00 0.00 38.63 2.24
521 522 4.280174 CGGGTAATGCTACACCTACATAGT 59.720 45.833 2.02 0.00 35.04 2.12
522 523 4.280174 ACGGGTAATGCTACACCTACATAG 59.720 45.833 0.00 0.00 35.04 2.23
523 524 4.217510 ACGGGTAATGCTACACCTACATA 58.782 43.478 0.00 0.00 35.04 2.29
524 525 3.036091 ACGGGTAATGCTACACCTACAT 58.964 45.455 0.00 0.00 35.04 2.29
525 526 2.459644 ACGGGTAATGCTACACCTACA 58.540 47.619 0.00 0.00 35.04 2.74
555 556 4.487714 AATCCATGCTTAAGAGAACCGA 57.512 40.909 6.67 0.00 0.00 4.69
585 586 8.541312 GTGAGAAGCGTTAGGATTTAACTAATC 58.459 37.037 0.00 0.00 41.64 1.75
623 624 4.380678 CGTTGCTTCACAATTTCACATGAG 59.619 41.667 0.00 0.00 41.27 2.90
646 647 6.545666 TCCACTCTACTCATCTCTCTGAATTC 59.454 42.308 0.00 0.00 0.00 2.17
670 671 9.939802 ACCCTCAGAAAATATATACCGTTAATC 57.060 33.333 0.00 0.00 0.00 1.75
741 742 2.045340 AGGGGGCGTAACATGTGC 60.045 61.111 0.00 0.00 0.00 4.57
888 889 3.530910 AAGTGAGGTTCGCACGGGG 62.531 63.158 0.00 0.00 39.08 5.73
975 980 1.544314 GCTGTTGACTCTCCTGGCTTT 60.544 52.381 0.00 0.00 0.00 3.51
977 982 1.676384 GCTGTTGACTCTCCTGGCT 59.324 57.895 0.00 0.00 0.00 4.75
985 990 0.723981 GCCATCTTCGCTGTTGACTC 59.276 55.000 0.00 0.00 0.00 3.36
987 992 0.674895 AGGCCATCTTCGCTGTTGAC 60.675 55.000 5.01 0.00 0.00 3.18
1194 1199 2.125713 TGCCGCATCCACACGTAG 60.126 61.111 0.00 0.00 0.00 3.51
1507 1531 2.234300 AACCATAGTATGAACGCCGG 57.766 50.000 11.91 0.00 0.00 6.13
1509 1533 3.486875 GCACAAACCATAGTATGAACGCC 60.487 47.826 11.91 0.00 0.00 5.68
1518 1542 1.247567 GCACCAGCACAAACCATAGT 58.752 50.000 0.00 0.00 41.58 2.12
1519 1543 0.527565 GGCACCAGCACAAACCATAG 59.472 55.000 0.00 0.00 44.61 2.23
1520 1544 0.112218 AGGCACCAGCACAAACCATA 59.888 50.000 0.00 0.00 44.61 2.74
1551 1575 5.902051 TCACTCGTATAGTCGTATCACAG 57.098 43.478 0.00 0.00 35.76 3.66
1586 1616 2.164827 ACGTACGTACTCATGCCAATGA 59.835 45.455 21.41 0.00 40.61 2.57
1606 1636 3.702555 GCACGAGACGCACCACAC 61.703 66.667 0.00 0.00 0.00 3.82
1710 1749 5.592104 ACAAAAGGGGTAACAAAGACTTG 57.408 39.130 0.00 0.00 38.61 3.16
1827 1866 4.318593 CGAGTAATTATGACGCGACAGATC 59.681 45.833 15.93 3.19 41.85 2.75
1837 1876 7.114529 CGTCCCTTCATTACGAGTAATTATGAC 59.885 40.741 5.81 7.76 38.89 3.06
1873 1912 5.062308 CCATAACTTGCTAGTTGAAGACGAC 59.938 44.000 21.56 0.00 44.22 4.34
1877 1916 4.695455 GCACCATAACTTGCTAGTTGAAGA 59.305 41.667 21.56 3.94 44.22 2.87
1976 2016 6.964464 TCTGAATTTATAGTGCCCCAAAGTA 58.036 36.000 0.00 0.00 0.00 2.24
2021 2061 6.018507 ACGGTCAACAACTTAAATGTGAGTAC 60.019 38.462 0.00 0.00 0.00 2.73
2035 2085 3.963383 ACAGATCAAACGGTCAACAAC 57.037 42.857 0.00 0.00 0.00 3.32
2037 2087 3.536570 TCAACAGATCAAACGGTCAACA 58.463 40.909 0.00 0.00 0.00 3.33
2038 2088 4.024048 ACATCAACAGATCAAACGGTCAAC 60.024 41.667 0.00 0.00 0.00 3.18
2039 2089 4.133820 ACATCAACAGATCAAACGGTCAA 58.866 39.130 0.00 0.00 0.00 3.18
2040 2090 3.738982 ACATCAACAGATCAAACGGTCA 58.261 40.909 0.00 0.00 0.00 4.02
2041 2091 4.024048 ACAACATCAACAGATCAAACGGTC 60.024 41.667 0.00 0.00 0.00 4.79
2042 2092 3.882888 ACAACATCAACAGATCAAACGGT 59.117 39.130 0.00 0.00 0.00 4.83
2043 2093 4.488126 ACAACATCAACAGATCAAACGG 57.512 40.909 0.00 0.00 0.00 4.44
2044 2094 5.565259 GCTTACAACATCAACAGATCAAACG 59.435 40.000 0.00 0.00 0.00 3.60
2045 2095 5.858581 GGCTTACAACATCAACAGATCAAAC 59.141 40.000 0.00 0.00 0.00 2.93
2046 2096 5.769662 AGGCTTACAACATCAACAGATCAAA 59.230 36.000 0.00 0.00 0.00 2.69
2047 2097 5.316167 AGGCTTACAACATCAACAGATCAA 58.684 37.500 0.00 0.00 0.00 2.57
2048 2098 4.910195 AGGCTTACAACATCAACAGATCA 58.090 39.130 0.00 0.00 0.00 2.92
2049 2099 4.033358 CGAGGCTTACAACATCAACAGATC 59.967 45.833 0.00 0.00 0.00 2.75
2050 2100 3.935203 CGAGGCTTACAACATCAACAGAT 59.065 43.478 0.00 0.00 0.00 2.90
2051 2101 3.244078 ACGAGGCTTACAACATCAACAGA 60.244 43.478 0.00 0.00 0.00 3.41
2052 2102 3.067106 ACGAGGCTTACAACATCAACAG 58.933 45.455 0.00 0.00 0.00 3.16
2053 2103 2.805671 CACGAGGCTTACAACATCAACA 59.194 45.455 0.00 0.00 0.00 3.33
2054 2104 2.412847 GCACGAGGCTTACAACATCAAC 60.413 50.000 0.00 0.00 40.25 3.18
2055 2105 1.804151 GCACGAGGCTTACAACATCAA 59.196 47.619 0.00 0.00 40.25 2.57
2056 2106 1.270571 TGCACGAGGCTTACAACATCA 60.271 47.619 0.00 0.00 45.15 3.07
2057 2107 1.438651 TGCACGAGGCTTACAACATC 58.561 50.000 0.00 0.00 45.15 3.06
2058 2108 1.535462 GTTGCACGAGGCTTACAACAT 59.465 47.619 14.16 0.00 45.15 2.71
2059 2109 0.941542 GTTGCACGAGGCTTACAACA 59.058 50.000 14.16 0.00 45.15 3.33
2060 2110 1.226746 AGTTGCACGAGGCTTACAAC 58.773 50.000 12.22 12.22 45.15 3.32
2061 2111 1.601903 CAAGTTGCACGAGGCTTACAA 59.398 47.619 0.00 0.00 45.15 2.41
2062 2112 1.225855 CAAGTTGCACGAGGCTTACA 58.774 50.000 0.00 0.00 45.15 2.41
2063 2113 0.110192 GCAAGTTGCACGAGGCTTAC 60.110 55.000 22.90 0.00 44.26 2.34
2064 2114 1.565156 CGCAAGTTGCACGAGGCTTA 61.565 55.000 26.56 0.00 45.36 3.09
2065 2115 2.896801 CGCAAGTTGCACGAGGCTT 61.897 57.895 26.56 0.00 45.36 4.35
2066 2116 3.349006 CGCAAGTTGCACGAGGCT 61.349 61.111 26.56 0.00 45.36 4.58
2067 2117 2.187599 AATCGCAAGTTGCACGAGGC 62.188 55.000 26.56 0.00 45.36 4.70
2068 2118 0.453282 CAATCGCAAGTTGCACGAGG 60.453 55.000 26.56 10.68 45.36 4.63
2102 2152 3.033764 GACCACGACGAAGCGCAA 61.034 61.111 11.47 0.00 33.86 4.85
2138 2188 4.949856 ACCAGCTGACAGAGAAAAGAAAAA 59.050 37.500 17.39 0.00 0.00 1.94
2220 2270 1.884579 GGCCAGCATATTCAGGACATG 59.115 52.381 0.00 0.00 0.00 3.21
2223 2273 0.475906 AGGGCCAGCATATTCAGGAC 59.524 55.000 6.18 0.00 0.00 3.85
2244 2294 1.221414 GTATAGCTTGAAGCAGGCCG 58.779 55.000 20.45 0.00 45.56 6.13
2266 2316 9.862371 TTCTCTAAAAAGTAGCTTAGTCTCATG 57.138 33.333 0.00 0.00 0.00 3.07
2299 2349 1.566211 ATATCTCCTCGGGATGGCAG 58.434 55.000 0.00 0.00 0.00 4.85
2306 2356 9.667107 TGCTAAATAAATAAATATCTCCTCGGG 57.333 33.333 0.00 0.00 0.00 5.14
2332 2382 8.663209 AATATGACTGCTATAGAGAGTCCAAT 57.337 34.615 21.10 14.70 36.13 3.16
2335 2385 8.801882 ACTAATATGACTGCTATAGAGAGTCC 57.198 38.462 21.10 10.14 36.13 3.85
2349 2399 5.770162 GCAGCCCCATAAAACTAATATGACT 59.230 40.000 0.00 0.00 33.49 3.41
2370 2420 3.046087 CCGGCCGATGCATAGCAG 61.046 66.667 30.73 16.07 43.65 4.24
2373 2423 4.662961 TCGCCGGCCGATGCATAG 62.663 66.667 30.73 9.14 41.89 2.23
2374 2424 3.529341 ATTCGCCGGCCGATGCATA 62.529 57.895 30.73 13.11 46.81 3.14
2375 2425 4.935495 ATTCGCCGGCCGATGCAT 62.935 61.111 30.73 11.56 46.81 3.96
2378 2428 1.714899 AAAAGATTCGCCGGCCGATG 61.715 55.000 30.73 19.00 46.81 3.84
2379 2429 1.029947 AAAAAGATTCGCCGGCCGAT 61.030 50.000 30.73 15.35 46.81 4.18
2380 2430 0.391395 TAAAAAGATTCGCCGGCCGA 60.391 50.000 30.73 18.82 45.77 5.54
2381 2431 0.448593 TTAAAAAGATTCGCCGGCCG 59.551 50.000 23.46 21.04 38.61 6.13
2382 2432 2.640346 TTTAAAAAGATTCGCCGGCC 57.360 45.000 23.46 6.58 0.00 6.13
2383 2433 3.828786 TCTTTTAAAAAGATTCGCCGGC 58.171 40.909 19.07 19.07 0.00 6.13
2384 2434 5.034797 GGATCTTTTAAAAAGATTCGCCGG 58.965 41.667 0.00 0.00 37.14 6.13
2385 2435 4.728608 CGGATCTTTTAAAAAGATTCGCCG 59.271 41.667 19.15 17.36 45.35 6.46
2389 2439 4.499399 GCGGCGGATCTTTTAAAAAGATTC 59.501 41.667 9.78 0.00 37.14 2.52
2390 2440 4.421058 GCGGCGGATCTTTTAAAAAGATT 58.579 39.130 9.78 0.00 37.14 2.40
2391 2441 3.181490 GGCGGCGGATCTTTTAAAAAGAT 60.181 43.478 9.78 0.00 39.53 2.40
2392 2442 2.162809 GGCGGCGGATCTTTTAAAAAGA 59.837 45.455 9.78 0.00 0.00 2.52
2393 2443 2.163613 AGGCGGCGGATCTTTTAAAAAG 59.836 45.455 9.78 0.00 0.00 2.27
2394 2444 2.162809 GAGGCGGCGGATCTTTTAAAAA 59.837 45.455 9.78 0.00 0.00 1.94
2395 2445 1.741145 GAGGCGGCGGATCTTTTAAAA 59.259 47.619 9.78 0.00 0.00 1.52
2396 2446 1.375551 GAGGCGGCGGATCTTTTAAA 58.624 50.000 9.78 0.00 0.00 1.52
2397 2447 0.808453 CGAGGCGGCGGATCTTTTAA 60.808 55.000 9.78 0.00 0.00 1.52
2398 2448 1.227147 CGAGGCGGCGGATCTTTTA 60.227 57.895 9.78 0.00 0.00 1.52
2399 2449 2.511600 CGAGGCGGCGGATCTTTT 60.512 61.111 9.78 0.00 0.00 2.27
2416 2466 4.492160 TCACATCCGACCGCTCGC 62.492 66.667 0.00 0.00 38.70 5.03
2417 2467 2.579787 GTCACATCCGACCGCTCG 60.580 66.667 0.00 0.00 39.83 5.03
2418 2468 0.669318 TTTGTCACATCCGACCGCTC 60.669 55.000 0.00 0.00 34.88 5.03
2419 2469 0.250124 TTTTGTCACATCCGACCGCT 60.250 50.000 0.00 0.00 34.88 5.52
2420 2470 0.802494 ATTTTGTCACATCCGACCGC 59.198 50.000 0.00 0.00 34.88 5.68
2421 2471 2.073056 TGATTTTGTCACATCCGACCG 58.927 47.619 0.00 0.00 34.88 4.79
2422 2472 3.670627 GCTTGATTTTGTCACATCCGACC 60.671 47.826 0.00 0.00 36.32 4.79
2423 2473 3.492313 GCTTGATTTTGTCACATCCGAC 58.508 45.455 0.00 0.00 36.32 4.79
2424 2474 2.159430 CGCTTGATTTTGTCACATCCGA 59.841 45.455 0.00 0.00 36.32 4.55
2425 2475 2.508867 CGCTTGATTTTGTCACATCCG 58.491 47.619 0.00 0.00 36.32 4.18
2426 2476 2.867429 CCGCTTGATTTTGTCACATCC 58.133 47.619 0.00 0.00 36.32 3.51
2427 2477 2.095059 AGCCGCTTGATTTTGTCACATC 60.095 45.455 0.00 0.00 36.32 3.06
2428 2478 1.888512 AGCCGCTTGATTTTGTCACAT 59.111 42.857 0.00 0.00 36.32 3.21
2429 2479 1.317613 AGCCGCTTGATTTTGTCACA 58.682 45.000 0.00 0.00 36.32 3.58
2430 2480 3.552604 TTAGCCGCTTGATTTTGTCAC 57.447 42.857 0.00 0.00 36.32 3.67
2431 2481 3.568007 AGTTTAGCCGCTTGATTTTGTCA 59.432 39.130 0.00 0.00 34.25 3.58
2432 2482 4.160736 AGTTTAGCCGCTTGATTTTGTC 57.839 40.909 0.00 0.00 0.00 3.18
2433 2483 5.699097 TTAGTTTAGCCGCTTGATTTTGT 57.301 34.783 0.00 0.00 0.00 2.83
2434 2484 6.253512 GGAATTAGTTTAGCCGCTTGATTTTG 59.746 38.462 0.00 0.00 0.00 2.44
2435 2485 6.152831 AGGAATTAGTTTAGCCGCTTGATTTT 59.847 34.615 0.00 0.00 0.00 1.82
2436 2486 5.652452 AGGAATTAGTTTAGCCGCTTGATTT 59.348 36.000 0.00 0.00 0.00 2.17
2437 2487 5.193679 AGGAATTAGTTTAGCCGCTTGATT 58.806 37.500 0.00 0.00 0.00 2.57
2438 2488 4.781934 AGGAATTAGTTTAGCCGCTTGAT 58.218 39.130 0.00 0.00 0.00 2.57
2439 2489 4.081087 AGAGGAATTAGTTTAGCCGCTTGA 60.081 41.667 0.00 0.00 0.00 3.02
2440 2490 4.192317 AGAGGAATTAGTTTAGCCGCTTG 58.808 43.478 0.00 0.00 0.00 4.01
2441 2491 4.489306 AGAGGAATTAGTTTAGCCGCTT 57.511 40.909 0.00 0.00 0.00 4.68
2442 2492 4.162509 AGAAGAGGAATTAGTTTAGCCGCT 59.837 41.667 0.00 0.00 0.00 5.52
2443 2493 4.443621 AGAAGAGGAATTAGTTTAGCCGC 58.556 43.478 0.00 0.00 0.00 6.53
2444 2494 6.675728 GCAAAGAAGAGGAATTAGTTTAGCCG 60.676 42.308 0.00 0.00 0.00 5.52
2445 2495 6.151144 TGCAAAGAAGAGGAATTAGTTTAGCC 59.849 38.462 0.00 0.00 0.00 3.93
2446 2496 7.145932 TGCAAAGAAGAGGAATTAGTTTAGC 57.854 36.000 0.00 0.00 0.00 3.09
2447 2497 8.567948 TGTTGCAAAGAAGAGGAATTAGTTTAG 58.432 33.333 0.00 0.00 0.00 1.85
2448 2498 8.458573 TGTTGCAAAGAAGAGGAATTAGTTTA 57.541 30.769 0.00 0.00 0.00 2.01
2449 2499 7.346751 TGTTGCAAAGAAGAGGAATTAGTTT 57.653 32.000 0.00 0.00 0.00 2.66
2450 2500 6.959639 TGTTGCAAAGAAGAGGAATTAGTT 57.040 33.333 0.00 0.00 0.00 2.24
2451 2501 6.959639 TTGTTGCAAAGAAGAGGAATTAGT 57.040 33.333 0.00 0.00 0.00 2.24
2452 2502 8.302438 AGATTTGTTGCAAAGAAGAGGAATTAG 58.698 33.333 0.00 0.00 27.82 1.73
2453 2503 8.181904 AGATTTGTTGCAAAGAAGAGGAATTA 57.818 30.769 0.00 0.00 27.82 1.40
2454 2504 7.059202 AGATTTGTTGCAAAGAAGAGGAATT 57.941 32.000 0.00 0.00 27.82 2.17
2455 2505 6.661304 AGATTTGTTGCAAAGAAGAGGAAT 57.339 33.333 0.00 0.00 27.82 3.01
2456 2506 7.765695 ATAGATTTGTTGCAAAGAAGAGGAA 57.234 32.000 0.00 0.00 27.82 3.36
2457 2507 7.765695 AATAGATTTGTTGCAAAGAAGAGGA 57.234 32.000 0.00 0.00 27.82 3.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.