Multiple sequence alignment - TraesCS1A01G177400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G177400 chr1A 100.000 4428 0 0 1 4428 320226119 320221692 0.000000e+00 8178.0
1 TraesCS1A01G177400 chr1A 95.349 602 24 1 1 598 320226451 320227052 0.000000e+00 953.0
2 TraesCS1A01G177400 chr1B 90.818 2788 172 30 689 3454 364418055 364420780 0.000000e+00 3653.0
3 TraesCS1A01G177400 chr1D 91.414 2213 149 19 601 2784 250142427 250140227 0.000000e+00 2996.0
4 TraesCS1A01G177400 chr1D 92.188 640 35 9 2821 3454 250140232 250139602 0.000000e+00 891.0
5 TraesCS1A01G177400 chr4B 96.975 562 16 1 3454 4015 437931844 437931284 0.000000e+00 942.0
6 TraesCS1A01G177400 chr2A 89.404 604 55 4 1 598 747203813 747203213 0.000000e+00 752.0
7 TraesCS1A01G177400 chr2A 90.231 389 38 0 210 598 747230938 747231326 3.950000e-140 508.0
8 TraesCS1A01G177400 chr2A 90.667 225 15 3 1 221 747205508 747205730 1.200000e-75 294.0
9 TraesCS1A01G177400 chr7B 98.805 251 3 0 3454 3704 50599015 50598765 8.740000e-122 448.0
10 TraesCS1A01G177400 chr3D 92.417 211 13 2 388 598 231171722 231171515 9.310000e-77 298.0
11 TraesCS1A01G177400 chr5D 90.995 211 18 1 388 598 387823715 387823924 2.610000e-72 283.0
12 TraesCS1A01G177400 chr5D 90.610 213 18 2 388 599 387815289 387815078 9.380000e-72 281.0
13 TraesCS1A01G177400 chr5D 90.521 211 20 0 388 598 532658164 532658374 3.370000e-71 279.0
14 TraesCS1A01G177400 chr6A 91.542 201 17 0 398 598 66266808 66266608 1.210000e-70 278.0
15 TraesCS1A01G177400 chr3A 88.532 218 25 0 381 598 533143986 533144203 9.440000e-67 265.0
16 TraesCS1A01G177400 chr3A 79.515 371 40 16 1 358 670595370 670595023 9.580000e-57 231.0
17 TraesCS1A01G177400 chr3A 83.871 93 6 4 269 361 670597158 670597075 3.670000e-11 80.5
18 TraesCS1A01G177400 chr6B 95.699 93 3 1 3456 3548 553374961 553375052 9.920000e-32 148.0
19 TraesCS1A01G177400 chr7A 92.727 55 2 2 3454 3508 661602308 661602256 1.320000e-10 78.7
20 TraesCS1A01G177400 chr4A 95.000 40 0 1 3456 3495 546241937 546241974 1.330000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G177400 chr1A 320221692 320226119 4427 True 8178.0 8178 100.000 1 4428 1 chr1A.!!$R1 4427
1 TraesCS1A01G177400 chr1A 320226451 320227052 601 False 953.0 953 95.349 1 598 1 chr1A.!!$F1 597
2 TraesCS1A01G177400 chr1B 364418055 364420780 2725 False 3653.0 3653 90.818 689 3454 1 chr1B.!!$F1 2765
3 TraesCS1A01G177400 chr1D 250139602 250142427 2825 True 1943.5 2996 91.801 601 3454 2 chr1D.!!$R1 2853
4 TraesCS1A01G177400 chr4B 437931284 437931844 560 True 942.0 942 96.975 3454 4015 1 chr4B.!!$R1 561
5 TraesCS1A01G177400 chr2A 747203213 747203813 600 True 752.0 752 89.404 1 598 1 chr2A.!!$R1 597

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
598 603 0.246635 CCCGGGATGCTATTACCTCG 59.753 60.0 18.48 0.0 0.00 4.63 F
1136 1175 0.108041 GGTTTCGTGGGGAATCGCTA 60.108 55.0 0.00 0.0 33.85 4.26 F
2805 2855 0.176449 GTGGGGCAAATGGCTTCATC 59.824 55.0 6.93 0.0 44.01 2.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2484 2528 0.109597 GTTTCCTGGCACATGCTTCG 60.110 55.0 3.48 0.0 41.70 3.79 R
2931 2981 0.317479 AGAAGTCCCCGACTCGTTTG 59.683 55.0 0.00 0.0 42.59 2.93 R
4221 4279 0.029163 TGGGATGGGGGATGAGCTTA 60.029 55.0 0.00 0.0 0.00 3.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
128 133 1.279496 TCACCCATGAGGAGTTCAGG 58.721 55.000 7.17 0.00 39.68 3.86
227 232 3.641434 TCCCTCTACGTAGTGCTACTT 57.359 47.619 21.53 1.37 45.73 2.24
385 390 4.625564 GCCTAGTTTATGGGTACAAGTGCT 60.626 45.833 0.00 0.00 0.00 4.40
452 457 0.251916 CTGACCGGTCCAGCCATTTA 59.748 55.000 31.19 8.71 36.97 1.40
464 469 1.483415 AGCCATTTAGCAGCCAATTGG 59.517 47.619 20.81 20.81 34.74 3.16
532 537 2.225675 TGGGGTATGGTGGAGTCAAGTA 60.226 50.000 0.00 0.00 0.00 2.24
598 603 0.246635 CCCGGGATGCTATTACCTCG 59.753 60.000 18.48 0.00 0.00 4.63
599 604 1.254026 CCGGGATGCTATTACCTCGA 58.746 55.000 0.00 0.00 0.00 4.04
614 619 7.825331 ATTACCTCGATGATTTGAGAGTCTA 57.175 36.000 0.00 0.00 35.64 2.59
620 625 5.123344 TCGATGATTTGAGAGTCTACGTTGA 59.877 40.000 0.00 0.00 0.00 3.18
627 632 5.298197 TGAGAGTCTACGTTGAAGATGTC 57.702 43.478 0.07 0.49 0.00 3.06
628 633 4.156190 TGAGAGTCTACGTTGAAGATGTCC 59.844 45.833 0.07 0.00 0.00 4.02
629 634 4.079970 AGAGTCTACGTTGAAGATGTCCA 58.920 43.478 0.07 0.00 0.00 4.02
630 635 4.707448 AGAGTCTACGTTGAAGATGTCCAT 59.293 41.667 0.07 0.00 0.00 3.41
631 636 5.886474 AGAGTCTACGTTGAAGATGTCCATA 59.114 40.000 0.07 0.00 0.00 2.74
632 637 6.038825 AGAGTCTACGTTGAAGATGTCCATAG 59.961 42.308 0.07 0.00 0.00 2.23
665 670 6.693315 AGTCTAGCAGAGTTCAGAATACTC 57.307 41.667 0.00 0.00 41.83 2.59
682 687 0.673985 CTCAGGGAAGACACGTCACA 59.326 55.000 0.00 0.00 0.00 3.58
683 688 0.387929 TCAGGGAAGACACGTCACAC 59.612 55.000 0.00 0.00 0.00 3.82
748 764 1.300388 GCAATGGATGGCGATTGGC 60.300 57.895 0.00 0.00 39.67 4.52
876 902 3.017581 ACCCAAGCCCTAGCCCTG 61.018 66.667 0.00 0.00 41.25 4.45
940 966 4.505039 CCCATTTTCTAACCTATCCCCTCG 60.505 50.000 0.00 0.00 0.00 4.63
964 996 4.008933 GCCACCACTCTCGCACCT 62.009 66.667 0.00 0.00 0.00 4.00
968 1000 0.317160 CACCACTCTCGCACCTAACA 59.683 55.000 0.00 0.00 0.00 2.41
986 1018 2.368439 ACAGCAGAAAACAGAGCACAA 58.632 42.857 0.00 0.00 0.00 3.33
1075 1114 1.140816 GCATCGAATCGAGGTAAGGC 58.859 55.000 18.42 7.62 39.89 4.35
1076 1115 1.538204 GCATCGAATCGAGGTAAGGCA 60.538 52.381 18.42 0.00 39.89 4.75
1082 1121 0.108138 ATCGAGGTAAGGCACAGCAC 60.108 55.000 0.00 0.00 0.00 4.40
1094 1133 1.463528 GCACAGCACGATTCGTTTACC 60.464 52.381 9.40 0.00 38.32 2.85
1101 1140 3.242316 GCACGATTCGTTTACCAATCTCC 60.242 47.826 9.40 0.00 38.32 3.71
1136 1175 0.108041 GGTTTCGTGGGGAATCGCTA 60.108 55.000 0.00 0.00 33.85 4.26
1137 1176 1.474498 GGTTTCGTGGGGAATCGCTAT 60.474 52.381 0.00 0.00 33.85 2.97
1138 1177 2.285977 GTTTCGTGGGGAATCGCTATT 58.714 47.619 0.00 0.00 33.85 1.73
1162 1201 2.304470 TGCCCAAATTTTAGGGGAAAGC 59.696 45.455 14.74 2.08 42.97 3.51
1251 1291 1.655329 GATCTCGCGATTCCCGTCT 59.345 57.895 10.36 0.00 41.15 4.18
1322 1364 4.906618 TCCTAGCTTGTTTCTTTAGGGTG 58.093 43.478 0.00 0.00 33.32 4.61
1383 1425 5.100259 AGTAATATGTTCTTCGTGTGTCGG 58.900 41.667 0.00 0.00 40.32 4.79
1418 1460 1.679305 GAGGTCCAGTGAGCCGAGA 60.679 63.158 0.00 0.00 39.89 4.04
1419 1461 1.228894 AGGTCCAGTGAGCCGAGAA 60.229 57.895 0.00 0.00 39.89 2.87
1511 1555 1.341531 CGATTCTACGAATCCTGGGCT 59.658 52.381 10.12 0.00 35.09 5.19
1533 1577 2.974698 GCACGCTGCCAAGTGACT 60.975 61.111 9.82 0.00 40.56 3.41
1660 1704 6.294508 GGTGTGCTAATTGAAGGTTATGTGTT 60.295 38.462 0.00 0.00 0.00 3.32
1840 1884 2.158885 AGGAAGCTAAAGCCGGAGAATC 60.159 50.000 5.05 0.00 43.38 2.52
1878 1922 1.452833 GTCCTGGATGAGGCTTGCC 60.453 63.158 0.00 2.97 42.47 4.52
1992 2036 3.315191 ACATTTACTTGAACAGCAGCGTT 59.685 39.130 2.78 2.78 0.00 4.84
2015 2059 0.461516 CTGCTGGACATCTGCATCGT 60.462 55.000 0.00 0.00 46.63 3.73
2061 2105 1.200948 GATCAAGGGCAGTTGCTTGTC 59.799 52.381 3.88 0.28 41.70 3.18
2112 2156 1.915614 GCGGTGTGCTGTCATTGGAG 61.916 60.000 0.00 0.00 41.73 3.86
2157 2201 4.559862 ACTTAAGGAGTGGATGGACAAG 57.440 45.455 7.53 0.00 37.17 3.16
2167 2211 1.611673 GGATGGACAAGGTGGACACAG 60.612 57.143 4.69 0.00 0.00 3.66
2298 2342 6.850752 TTGTATGGAATAGAGTCTGTGACA 57.149 37.500 1.86 0.00 34.60 3.58
2304 2348 5.540337 TGGAATAGAGTCTGTGACAGTCTTT 59.460 40.000 13.25 10.40 34.60 2.52
2386 2430 2.562738 GTCCCTCAGAAATTTGGTTGGG 59.437 50.000 0.00 2.57 34.98 4.12
2438 2482 0.555769 AGTGGGGAAGTCAAAAGGCA 59.444 50.000 0.00 0.00 0.00 4.75
2442 2486 3.576550 GTGGGGAAGTCAAAAGGCAATTA 59.423 43.478 0.00 0.00 0.00 1.40
2448 2492 5.394553 GGAAGTCAAAAGGCAATTATCCAGG 60.395 44.000 0.00 0.00 0.00 4.45
2484 2528 4.153296 GCTGTAAAAGAGCTGGAAGAAGTC 59.847 45.833 0.00 0.00 34.07 3.01
2555 2599 5.200483 TGAAGAAGAAAATGACAACCTGGT 58.800 37.500 0.00 0.00 0.00 4.00
2565 2609 0.817013 ACAACCTGGTTTGTGCTGTG 59.183 50.000 9.90 0.00 38.31 3.66
2635 2679 7.222161 AGAAAAACCCGAGTGTAATCTTAAGT 58.778 34.615 1.63 0.00 0.00 2.24
2637 2681 4.367386 ACCCGAGTGTAATCTTAAGTCG 57.633 45.455 1.63 2.56 0.00 4.18
2658 2702 1.208052 GCTGATGACAGTAGCCAGGAA 59.792 52.381 0.00 0.00 45.04 3.36
2681 2725 5.672421 TGTGAAGTGATCATGACAGAGAT 57.328 39.130 0.00 0.00 40.97 2.75
2683 2727 5.873164 TGTGAAGTGATCATGACAGAGATTG 59.127 40.000 0.00 0.00 40.97 2.67
2738 2788 1.137872 GCAGGATACCCACTGTGAGAG 59.862 57.143 9.86 0.09 37.07 3.20
2747 2797 2.094286 CCCACTGTGAGAGTAAGCTGAG 60.094 54.545 9.86 0.00 31.73 3.35
2749 2799 2.029560 CACTGTGAGAGTAAGCTGAGCA 60.030 50.000 7.39 0.00 31.73 4.26
2750 2800 2.029470 ACTGTGAGAGTAAGCTGAGCAC 60.029 50.000 7.39 0.00 30.86 4.40
2773 2823 4.739228 CGCTTGAGAGTATCAGTGAAGATG 59.261 45.833 0.00 0.00 39.68 2.90
2778 2828 6.861144 TGAGAGTATCAGTGAAGATGACAAG 58.139 40.000 0.00 0.00 37.82 3.16
2780 2830 7.341512 TGAGAGTATCAGTGAAGATGACAAGAT 59.658 37.037 0.00 0.00 37.82 2.40
2781 2831 7.490840 AGAGTATCAGTGAAGATGACAAGATG 58.509 38.462 0.00 0.00 37.82 2.90
2791 2841 5.301835 AGATGACAAGATGATAAGTGGGG 57.698 43.478 0.00 0.00 0.00 4.96
2805 2855 0.176449 GTGGGGCAAATGGCTTCATC 59.824 55.000 6.93 0.00 44.01 2.92
2812 2862 2.270923 CAAATGGCTTCATCGACGAGA 58.729 47.619 3.01 0.00 0.00 4.04
2814 2864 2.898729 ATGGCTTCATCGACGAGAAT 57.101 45.000 3.01 0.00 0.00 2.40
2816 2866 4.527509 ATGGCTTCATCGACGAGAATAT 57.472 40.909 3.01 1.25 0.00 1.28
2817 2867 3.642705 TGGCTTCATCGACGAGAATATG 58.357 45.455 3.01 0.00 0.00 1.78
2824 2874 3.537793 TCGACGAGAATATGACCATCG 57.462 47.619 0.00 0.00 39.22 3.84
2841 2891 0.603569 TCGTTCCTGAGAGAACCAGC 59.396 55.000 7.80 0.00 42.63 4.85
2853 2903 0.250513 GAACCAGCATCTCGGAAGGT 59.749 55.000 0.00 0.00 0.00 3.50
2889 2939 2.432146 GGACTGTATCTCCAGCATGTCA 59.568 50.000 0.00 0.00 35.83 3.58
2931 2981 0.320946 TCGGGTTGGATTCGTTGTCC 60.321 55.000 0.00 0.00 36.26 4.02
3043 3093 3.056107 CACCGAGGTTAGGTCTTGATTCA 60.056 47.826 0.00 0.00 40.59 2.57
3097 3152 4.503007 GTGTAACATGTGTATAGACGGCTG 59.497 45.833 0.00 0.00 36.32 4.85
3102 3157 1.822371 TGTGTATAGACGGCTGAGCAA 59.178 47.619 6.82 0.00 0.00 3.91
3130 3185 0.601558 TGTACACCGCTCTTCTGACC 59.398 55.000 0.00 0.00 0.00 4.02
3137 3192 1.739562 GCTCTTCTGACCTGTGGCG 60.740 63.158 0.00 0.00 0.00 5.69
3138 3193 1.079543 CTCTTCTGACCTGTGGCGG 60.080 63.158 0.00 0.00 0.00 6.13
3139 3194 1.821061 CTCTTCTGACCTGTGGCGGT 61.821 60.000 0.00 0.00 40.80 5.68
3212 3267 1.102809 TGCATAATCTTGGGCTGCCG 61.103 55.000 13.40 0.00 31.89 5.69
3266 3321 5.998363 AGGTTTGATAGTCCTTGTGTTCTTC 59.002 40.000 0.00 0.00 0.00 2.87
3301 3359 8.207521 ACGAGTAGAAGTAGTAGACAAATACC 57.792 38.462 0.00 0.00 0.00 2.73
3309 3367 8.743085 AAGTAGTAGACAAATACCGAGTCATA 57.257 34.615 0.00 0.00 34.80 2.15
3310 3368 8.921353 AGTAGTAGACAAATACCGAGTCATAT 57.079 34.615 0.00 0.00 34.80 1.78
3314 3372 8.298140 AGTAGACAAATACCGAGTCATATTAGC 58.702 37.037 0.00 0.00 34.80 3.09
3404 3462 3.273434 TGCCAGCAATGTTAGAGATGAC 58.727 45.455 0.00 0.00 0.00 3.06
3412 3470 6.983307 AGCAATGTTAGAGATGACAGATGTAC 59.017 38.462 0.00 0.00 0.00 2.90
3414 3472 7.495901 CAATGTTAGAGATGACAGATGTACCT 58.504 38.462 0.00 0.00 0.00 3.08
3426 3484 5.010282 ACAGATGTACCTTAAAGGGCAAAG 58.990 41.667 0.00 0.00 40.58 2.77
3427 3485 4.017126 AGATGTACCTTAAAGGGCAAAGC 58.983 43.478 0.00 0.00 40.58 3.51
3428 3486 3.231207 TGTACCTTAAAGGGCAAAGCA 57.769 42.857 0.00 0.00 40.58 3.91
3429 3487 3.153919 TGTACCTTAAAGGGCAAAGCAG 58.846 45.455 0.00 0.00 40.58 4.24
3450 3508 4.328440 CAGAAGTCTTTGAGGTATCTTGCG 59.672 45.833 0.00 0.00 0.00 4.85
3505 3563 5.927281 ACCAAATTCATTGATCAGAAGGG 57.073 39.130 0.00 3.89 41.85 3.95
3517 3575 4.021104 TGATCAGAAGGGAACACAGTACAG 60.021 45.833 0.00 0.00 0.00 2.74
3526 3584 2.029288 CACAGTACAGCAGGTGCCG 61.029 63.158 0.00 0.00 43.38 5.69
3709 3767 2.053627 CCTGAAAAATGCGTCTGTTGC 58.946 47.619 0.00 0.00 0.00 4.17
3817 3875 4.665451 TGTCATCCAATCCTTGATGTTGT 58.335 39.130 0.00 0.00 0.00 3.32
3837 3895 2.490903 GTTAGTGTCCGTCCAGCTAGAA 59.509 50.000 0.00 0.00 0.00 2.10
3888 3946 3.453070 GAGGCGATCCCAGCACTCC 62.453 68.421 3.45 0.00 36.08 3.85
3944 4002 0.635731 GTCTCGAGATTGCGTTCACG 59.364 55.000 19.90 0.00 43.27 4.35
3949 4007 0.246912 GAGATTGCGTTCACGAAGCG 60.247 55.000 2.87 0.00 43.02 4.68
3952 4010 1.897398 ATTGCGTTCACGAAGCGGAC 61.897 55.000 2.87 0.00 43.02 4.79
3954 4012 2.591311 GCGTTCACGAAGCGGACAA 61.591 57.895 2.87 0.00 43.02 3.18
3961 4019 1.136336 CACGAAGCGGACAAAAGTAGC 60.136 52.381 0.00 0.00 0.00 3.58
4015 4073 1.220749 GTCAGGATGCGCCCAAGTA 59.779 57.895 4.18 0.00 37.37 2.24
4016 4074 1.090052 GTCAGGATGCGCCCAAGTAC 61.090 60.000 4.18 0.00 37.37 2.73
4017 4075 1.078497 CAGGATGCGCCCAAGTACA 60.078 57.895 4.18 0.00 37.37 2.90
4018 4076 1.091771 CAGGATGCGCCCAAGTACAG 61.092 60.000 4.18 0.00 37.37 2.74
4019 4077 2.472909 GGATGCGCCCAAGTACAGC 61.473 63.158 4.18 0.00 0.00 4.40
4020 4078 1.745115 GATGCGCCCAAGTACAGCA 60.745 57.895 4.18 0.00 42.28 4.41
4021 4079 1.709147 GATGCGCCCAAGTACAGCAG 61.709 60.000 4.18 0.00 41.34 4.24
4022 4080 2.358737 GCGCCCAAGTACAGCAGT 60.359 61.111 0.00 0.00 0.00 4.40
4023 4081 2.391389 GCGCCCAAGTACAGCAGTC 61.391 63.158 0.00 0.00 0.00 3.51
4024 4082 1.741770 CGCCCAAGTACAGCAGTCC 60.742 63.158 0.00 0.00 0.00 3.85
4025 4083 1.374947 GCCCAAGTACAGCAGTCCA 59.625 57.895 0.00 0.00 0.00 4.02
4026 4084 0.035056 GCCCAAGTACAGCAGTCCAT 60.035 55.000 0.00 0.00 0.00 3.41
4027 4085 1.209504 GCCCAAGTACAGCAGTCCATA 59.790 52.381 0.00 0.00 0.00 2.74
4028 4086 2.743183 GCCCAAGTACAGCAGTCCATAG 60.743 54.545 0.00 0.00 0.00 2.23
4029 4087 2.158900 CCCAAGTACAGCAGTCCATAGG 60.159 54.545 0.00 0.00 0.00 2.57
4030 4088 2.766263 CCAAGTACAGCAGTCCATAGGA 59.234 50.000 0.00 0.00 0.00 2.94
4031 4089 3.197766 CCAAGTACAGCAGTCCATAGGAA 59.802 47.826 0.00 0.00 31.38 3.36
4032 4090 4.437239 CAAGTACAGCAGTCCATAGGAAG 58.563 47.826 0.00 0.00 31.38 3.46
4033 4091 3.982516 AGTACAGCAGTCCATAGGAAGA 58.017 45.455 0.00 0.00 31.38 2.87
4034 4092 4.353777 AGTACAGCAGTCCATAGGAAGAA 58.646 43.478 0.00 0.00 31.38 2.52
4035 4093 3.902881 ACAGCAGTCCATAGGAAGAAG 57.097 47.619 0.00 0.00 31.38 2.85
4036 4094 2.093235 ACAGCAGTCCATAGGAAGAAGC 60.093 50.000 0.00 0.00 31.38 3.86
4037 4095 1.137872 AGCAGTCCATAGGAAGAAGCG 59.862 52.381 0.00 0.00 31.38 4.68
4038 4096 1.808133 GCAGTCCATAGGAAGAAGCGG 60.808 57.143 0.00 0.00 31.38 5.52
4039 4097 0.466124 AGTCCATAGGAAGAAGCGGC 59.534 55.000 0.00 0.00 31.38 6.53
4040 4098 0.178068 GTCCATAGGAAGAAGCGGCA 59.822 55.000 1.45 0.00 31.38 5.69
4041 4099 0.178068 TCCATAGGAAGAAGCGGCAC 59.822 55.000 1.45 0.00 0.00 5.01
4042 4100 0.179000 CCATAGGAAGAAGCGGCACT 59.821 55.000 1.45 0.00 0.00 4.40
4043 4101 1.407437 CCATAGGAAGAAGCGGCACTT 60.407 52.381 1.45 7.46 42.98 3.16
4044 4102 1.667724 CATAGGAAGAAGCGGCACTTG 59.332 52.381 14.94 0.84 39.29 3.16
4045 4103 0.673644 TAGGAAGAAGCGGCACTTGC 60.674 55.000 17.95 17.95 39.29 4.01
4055 4113 4.666253 GCACTTGCCAGGAGCCCA 62.666 66.667 0.00 0.00 42.71 5.36
4056 4114 2.674380 CACTTGCCAGGAGCCCAC 60.674 66.667 0.00 0.00 42.71 4.61
4057 4115 3.177884 ACTTGCCAGGAGCCCACA 61.178 61.111 0.00 0.00 42.71 4.17
4058 4116 2.674380 CTTGCCAGGAGCCCACAC 60.674 66.667 0.00 0.00 42.71 3.82
4059 4117 3.496309 CTTGCCAGGAGCCCACACA 62.496 63.158 0.00 0.00 42.71 3.72
4060 4118 3.496309 TTGCCAGGAGCCCACACAG 62.496 63.158 0.00 0.00 42.71 3.66
4062 4120 4.729918 CCAGGAGCCCACACAGCC 62.730 72.222 0.00 0.00 0.00 4.85
4063 4121 4.729918 CAGGAGCCCACACAGCCC 62.730 72.222 0.00 0.00 0.00 5.19
4066 4124 4.269523 GAGCCCACACAGCCCACA 62.270 66.667 0.00 0.00 0.00 4.17
4067 4125 4.275508 AGCCCACACAGCCCACAG 62.276 66.667 0.00 0.00 0.00 3.66
4068 4126 4.586235 GCCCACACAGCCCACAGT 62.586 66.667 0.00 0.00 0.00 3.55
4069 4127 3.156714 CCCACACAGCCCACAGTA 58.843 61.111 0.00 0.00 0.00 2.74
4070 4128 1.302511 CCCACACAGCCCACAGTAC 60.303 63.158 0.00 0.00 0.00 2.73
4071 4129 1.754745 CCACACAGCCCACAGTACT 59.245 57.895 0.00 0.00 0.00 2.73
4072 4130 0.320771 CCACACAGCCCACAGTACTC 60.321 60.000 0.00 0.00 0.00 2.59
4073 4131 0.681733 CACACAGCCCACAGTACTCT 59.318 55.000 0.00 0.00 0.00 3.24
4074 4132 0.681733 ACACAGCCCACAGTACTCTG 59.318 55.000 6.91 6.91 46.18 3.35
4075 4133 0.036952 CACAGCCCACAGTACTCTGG 60.037 60.000 10.09 10.09 45.14 3.86
4076 4134 1.078848 CAGCCCACAGTACTCTGGC 60.079 63.158 11.49 13.89 45.14 4.85
4077 4135 2.269241 GCCCACAGTACTCTGGCC 59.731 66.667 11.49 0.00 45.14 5.36
4078 4136 2.579201 CCCACAGTACTCTGGCCG 59.421 66.667 11.49 0.00 45.14 6.13
4079 4137 2.125512 CCACAGTACTCTGGCCGC 60.126 66.667 4.05 0.00 45.14 6.53
4080 4138 2.650116 CCACAGTACTCTGGCCGCT 61.650 63.158 4.05 0.00 45.14 5.52
4081 4139 1.293498 CACAGTACTCTGGCCGCTT 59.707 57.895 0.00 0.00 45.14 4.68
4082 4140 0.737715 CACAGTACTCTGGCCGCTTC 60.738 60.000 0.00 0.00 45.14 3.86
4083 4141 1.153549 CAGTACTCTGGCCGCTTCC 60.154 63.158 0.00 0.00 37.97 3.46
4084 4142 2.202756 GTACTCTGGCCGCTTCCG 60.203 66.667 0.00 0.00 0.00 4.30
4102 4160 4.451150 GCTGCACCGATCCCGTGA 62.451 66.667 10.93 0.00 0.00 4.35
4103 4161 2.264480 CTGCACCGATCCCGTGAA 59.736 61.111 10.93 0.64 0.00 3.18
4104 4162 2.047655 TGCACCGATCCCGTGAAC 60.048 61.111 10.93 0.00 0.00 3.18
4105 4163 2.264794 GCACCGATCCCGTGAACT 59.735 61.111 10.93 0.00 0.00 3.01
4106 4164 2.100631 GCACCGATCCCGTGAACTG 61.101 63.158 10.93 0.00 0.00 3.16
4107 4165 2.100631 CACCGATCCCGTGAACTGC 61.101 63.158 2.08 0.00 0.00 4.40
4108 4166 2.264480 CCGATCCCGTGAACTGCA 59.736 61.111 0.00 0.00 0.00 4.41
4109 4167 1.375396 CCGATCCCGTGAACTGCAA 60.375 57.895 0.00 0.00 0.00 4.08
4110 4168 0.953471 CCGATCCCGTGAACTGCAAA 60.953 55.000 0.00 0.00 0.00 3.68
4111 4169 0.871722 CGATCCCGTGAACTGCAAAA 59.128 50.000 0.00 0.00 0.00 2.44
4112 4170 1.135972 CGATCCCGTGAACTGCAAAAG 60.136 52.381 0.00 0.00 0.00 2.27
4113 4171 2.151202 GATCCCGTGAACTGCAAAAGA 58.849 47.619 0.00 0.00 0.00 2.52
4114 4172 2.270352 TCCCGTGAACTGCAAAAGAT 57.730 45.000 0.00 0.00 0.00 2.40
4115 4173 3.410631 TCCCGTGAACTGCAAAAGATA 57.589 42.857 0.00 0.00 0.00 1.98
4116 4174 3.334691 TCCCGTGAACTGCAAAAGATAG 58.665 45.455 0.00 0.00 0.00 2.08
4117 4175 2.420022 CCCGTGAACTGCAAAAGATAGG 59.580 50.000 0.00 0.00 0.00 2.57
4118 4176 2.159517 CCGTGAACTGCAAAAGATAGGC 60.160 50.000 0.00 0.00 0.00 3.93
4119 4177 2.744202 CGTGAACTGCAAAAGATAGGCT 59.256 45.455 0.00 0.00 0.00 4.58
4120 4178 3.425359 CGTGAACTGCAAAAGATAGGCTG 60.425 47.826 0.00 0.00 0.00 4.85
4121 4179 3.753272 GTGAACTGCAAAAGATAGGCTGA 59.247 43.478 0.00 0.00 0.00 4.26
4122 4180 4.397417 GTGAACTGCAAAAGATAGGCTGAT 59.603 41.667 0.00 0.00 0.00 2.90
4123 4181 4.637534 TGAACTGCAAAAGATAGGCTGATC 59.362 41.667 0.00 0.00 0.00 2.92
4124 4182 4.500499 ACTGCAAAAGATAGGCTGATCT 57.500 40.909 0.00 0.00 37.81 2.75
4125 4183 5.620738 ACTGCAAAAGATAGGCTGATCTA 57.379 39.130 0.00 0.00 35.01 1.98
4126 4184 5.609423 ACTGCAAAAGATAGGCTGATCTAG 58.391 41.667 0.00 0.00 35.01 2.43
4150 4208 5.712152 AAGAGTATTCTTGGCTTTGGTTG 57.288 39.130 0.00 0.00 42.04 3.77
4151 4209 4.985538 AGAGTATTCTTGGCTTTGGTTGA 58.014 39.130 0.00 0.00 0.00 3.18
4152 4210 5.385198 AGAGTATTCTTGGCTTTGGTTGAA 58.615 37.500 0.00 0.00 0.00 2.69
4153 4211 6.012745 AGAGTATTCTTGGCTTTGGTTGAAT 58.987 36.000 0.00 0.00 0.00 2.57
4154 4212 6.151817 AGAGTATTCTTGGCTTTGGTTGAATC 59.848 38.462 0.00 0.00 0.00 2.52
4155 4213 3.641437 TTCTTGGCTTTGGTTGAATCG 57.359 42.857 0.00 0.00 0.00 3.34
4156 4214 1.269448 TCTTGGCTTTGGTTGAATCGC 59.731 47.619 0.00 0.00 0.00 4.58
4157 4215 0.316841 TTGGCTTTGGTTGAATCGCC 59.683 50.000 0.00 0.00 38.01 5.54
4158 4216 0.825425 TGGCTTTGGTTGAATCGCCA 60.825 50.000 0.00 0.00 44.49 5.69
4159 4217 0.316841 GGCTTTGGTTGAATCGCCAA 59.683 50.000 5.25 5.25 42.38 4.52
4161 4219 1.792367 GCTTTGGTTGAATCGCCAAAC 59.208 47.619 14.70 9.98 46.22 2.93
4162 4220 2.050691 CTTTGGTTGAATCGCCAAACG 58.949 47.619 14.70 9.42 46.22 3.60
4175 4233 1.261619 GCCAAACGATCTTATCAGGCG 59.738 52.381 0.00 0.00 0.00 5.52
4176 4234 2.550978 CCAAACGATCTTATCAGGCGT 58.449 47.619 0.00 0.00 34.33 5.68
4177 4235 2.285220 CCAAACGATCTTATCAGGCGTG 59.715 50.000 0.00 0.00 33.55 5.34
4178 4236 1.571919 AACGATCTTATCAGGCGTGC 58.428 50.000 0.35 0.00 33.55 5.34
4179 4237 0.249489 ACGATCTTATCAGGCGTGCC 60.249 55.000 1.67 1.67 32.52 5.01
4180 4238 0.249447 CGATCTTATCAGGCGTGCCA 60.249 55.000 14.29 0.00 38.92 4.92
4181 4239 1.606480 CGATCTTATCAGGCGTGCCAT 60.606 52.381 14.29 1.09 38.92 4.40
4182 4240 2.072298 GATCTTATCAGGCGTGCCATC 58.928 52.381 14.29 1.58 38.92 3.51
4183 4241 0.249447 TCTTATCAGGCGTGCCATCG 60.249 55.000 14.29 1.04 38.92 3.84
4184 4242 0.249447 CTTATCAGGCGTGCCATCGA 60.249 55.000 14.29 6.88 38.92 3.59
4185 4243 0.529773 TTATCAGGCGTGCCATCGAC 60.530 55.000 14.29 0.00 39.37 4.20
4186 4244 2.363711 TATCAGGCGTGCCATCGACC 62.364 60.000 14.29 0.00 40.00 4.79
4187 4245 4.758251 CAGGCGTGCCATCGACCA 62.758 66.667 14.29 0.00 40.00 4.02
4188 4246 4.457496 AGGCGTGCCATCGACCAG 62.457 66.667 14.29 0.00 40.00 4.00
4191 4249 3.190849 CGTGCCATCGACCAGCAG 61.191 66.667 6.12 0.00 37.15 4.24
4192 4250 2.046892 GTGCCATCGACCAGCAGT 60.047 61.111 6.12 0.00 37.15 4.40
4193 4251 1.218047 GTGCCATCGACCAGCAGTA 59.782 57.895 6.12 0.00 37.15 2.74
4194 4252 1.084370 GTGCCATCGACCAGCAGTAC 61.084 60.000 6.12 0.00 37.15 2.73
4195 4253 1.218047 GCCATCGACCAGCAGTACA 59.782 57.895 0.00 0.00 0.00 2.90
4196 4254 0.807667 GCCATCGACCAGCAGTACAG 60.808 60.000 0.00 0.00 0.00 2.74
4197 4255 0.817654 CCATCGACCAGCAGTACAGA 59.182 55.000 0.00 0.00 0.00 3.41
4198 4256 1.202348 CCATCGACCAGCAGTACAGAG 60.202 57.143 0.00 0.00 0.00 3.35
4199 4257 1.474478 CATCGACCAGCAGTACAGAGT 59.526 52.381 0.00 0.00 0.00 3.24
4200 4258 1.166129 TCGACCAGCAGTACAGAGTC 58.834 55.000 0.00 0.00 0.00 3.36
4201 4259 0.171455 CGACCAGCAGTACAGAGTCC 59.829 60.000 0.00 0.00 0.00 3.85
4202 4260 1.257743 GACCAGCAGTACAGAGTCCA 58.742 55.000 0.00 0.00 0.00 4.02
4203 4261 1.203523 GACCAGCAGTACAGAGTCCAG 59.796 57.143 0.00 0.00 0.00 3.86
4204 4262 1.203063 ACCAGCAGTACAGAGTCCAGA 60.203 52.381 0.00 0.00 0.00 3.86
4205 4263 1.895798 CCAGCAGTACAGAGTCCAGAA 59.104 52.381 0.00 0.00 0.00 3.02
4206 4264 2.094286 CCAGCAGTACAGAGTCCAGAAG 60.094 54.545 0.00 0.00 0.00 2.85
4207 4265 2.094286 CAGCAGTACAGAGTCCAGAAGG 60.094 54.545 0.00 0.00 0.00 3.46
4208 4266 1.205893 GCAGTACAGAGTCCAGAAGGG 59.794 57.143 0.00 0.00 34.83 3.95
4209 4267 2.808919 CAGTACAGAGTCCAGAAGGGA 58.191 52.381 0.00 0.00 45.89 4.20
4216 4274 3.081554 TCCAGAAGGGAAGCAGGC 58.918 61.111 0.00 0.00 44.80 4.85
4217 4275 2.044551 CCAGAAGGGAAGCAGGCC 60.045 66.667 0.00 0.00 40.01 5.19
4218 4276 2.437359 CAGAAGGGAAGCAGGCCG 60.437 66.667 0.00 0.00 0.00 6.13
4219 4277 4.416738 AGAAGGGAAGCAGGCCGC 62.417 66.667 11.02 11.02 42.91 6.53
4237 4295 3.614399 CGTAAGCTCATCCCCCATC 57.386 57.895 0.00 0.00 0.00 3.51
4238 4296 0.035458 CGTAAGCTCATCCCCCATCC 59.965 60.000 0.00 0.00 0.00 3.51
4239 4297 0.402121 GTAAGCTCATCCCCCATCCC 59.598 60.000 0.00 0.00 0.00 3.85
4240 4298 0.029163 TAAGCTCATCCCCCATCCCA 60.029 55.000 0.00 0.00 0.00 4.37
4241 4299 0.703758 AAGCTCATCCCCCATCCCAT 60.704 55.000 0.00 0.00 0.00 4.00
4242 4300 1.138863 AGCTCATCCCCCATCCCATC 61.139 60.000 0.00 0.00 0.00 3.51
4243 4301 2.081955 CTCATCCCCCATCCCATCC 58.918 63.158 0.00 0.00 0.00 3.51
4244 4302 1.845627 CTCATCCCCCATCCCATCCG 61.846 65.000 0.00 0.00 0.00 4.18
4245 4303 2.156098 CATCCCCCATCCCATCCGT 61.156 63.158 0.00 0.00 0.00 4.69
4246 4304 2.156098 ATCCCCCATCCCATCCGTG 61.156 63.158 0.00 0.00 0.00 4.94
4247 4305 2.636380 ATCCCCCATCCCATCCGTGA 62.636 60.000 0.00 0.00 0.00 4.35
4248 4306 2.822637 CCCCCATCCCATCCGTGAG 61.823 68.421 0.00 0.00 0.00 3.51
4269 4327 4.838486 GTGCGCGAGGTCGAGGAG 62.838 72.222 12.10 0.00 40.24 3.69
4273 4331 3.532155 GCGAGGTCGAGGAGCCAT 61.532 66.667 2.94 0.00 43.02 4.40
4274 4332 2.725008 CGAGGTCGAGGAGCCATC 59.275 66.667 0.00 0.00 43.02 3.51
4275 4333 1.826054 CGAGGTCGAGGAGCCATCT 60.826 63.158 0.00 0.00 43.02 2.90
4276 4334 1.739049 GAGGTCGAGGAGCCATCTG 59.261 63.158 0.00 0.00 0.00 2.90
4277 4335 1.000993 AGGTCGAGGAGCCATCTGT 59.999 57.895 0.00 0.00 0.00 3.41
4278 4336 1.040339 AGGTCGAGGAGCCATCTGTC 61.040 60.000 0.00 0.00 0.00 3.51
4279 4337 1.064946 GTCGAGGAGCCATCTGTCG 59.935 63.158 0.00 0.00 34.88 4.35
4280 4338 1.378646 TCGAGGAGCCATCTGTCGT 60.379 57.895 0.00 0.00 35.03 4.34
4281 4339 0.965866 TCGAGGAGCCATCTGTCGTT 60.966 55.000 0.00 0.00 35.03 3.85
4282 4340 0.738975 CGAGGAGCCATCTGTCGTTA 59.261 55.000 0.00 0.00 31.34 3.18
4283 4341 1.338337 CGAGGAGCCATCTGTCGTTAT 59.662 52.381 0.00 0.00 31.34 1.89
4284 4342 2.748605 GAGGAGCCATCTGTCGTTATG 58.251 52.381 0.00 0.00 0.00 1.90
4285 4343 1.202580 AGGAGCCATCTGTCGTTATGC 60.203 52.381 0.00 0.00 0.00 3.14
4286 4344 1.473257 GGAGCCATCTGTCGTTATGCA 60.473 52.381 0.00 0.00 0.00 3.96
4287 4345 2.487934 GAGCCATCTGTCGTTATGCAT 58.512 47.619 3.79 3.79 0.00 3.96
4288 4346 2.478134 GAGCCATCTGTCGTTATGCATC 59.522 50.000 0.19 0.00 0.00 3.91
4289 4347 1.193203 GCCATCTGTCGTTATGCATCG 59.807 52.381 0.19 1.01 0.00 3.84
4290 4348 1.193203 CCATCTGTCGTTATGCATCGC 59.807 52.381 0.19 0.00 0.00 4.58
4291 4349 1.193203 CATCTGTCGTTATGCATCGCC 59.807 52.381 0.19 0.00 0.00 5.54
4292 4350 0.459899 TCTGTCGTTATGCATCGCCT 59.540 50.000 0.19 0.00 0.00 5.52
4293 4351 0.855349 CTGTCGTTATGCATCGCCTC 59.145 55.000 0.19 0.00 0.00 4.70
4294 4352 0.529773 TGTCGTTATGCATCGCCTCC 60.530 55.000 0.19 0.00 0.00 4.30
4295 4353 1.069090 TCGTTATGCATCGCCTCCC 59.931 57.895 0.19 0.00 0.00 4.30
4296 4354 1.069765 CGTTATGCATCGCCTCCCT 59.930 57.895 0.19 0.00 0.00 4.20
4297 4355 0.317160 CGTTATGCATCGCCTCCCTA 59.683 55.000 0.19 0.00 0.00 3.53
4298 4356 1.270094 CGTTATGCATCGCCTCCCTAA 60.270 52.381 0.19 0.00 0.00 2.69
4299 4357 2.143925 GTTATGCATCGCCTCCCTAAC 58.856 52.381 0.19 0.00 0.00 2.34
4300 4358 0.685097 TATGCATCGCCTCCCTAACC 59.315 55.000 0.19 0.00 0.00 2.85
4301 4359 2.280186 GCATCGCCTCCCTAACCG 60.280 66.667 0.00 0.00 0.00 4.44
4302 4360 2.792947 GCATCGCCTCCCTAACCGA 61.793 63.158 0.00 0.00 0.00 4.69
4303 4361 1.820581 CATCGCCTCCCTAACCGAA 59.179 57.895 0.00 0.00 33.10 4.30
4304 4362 0.529992 CATCGCCTCCCTAACCGAAC 60.530 60.000 0.00 0.00 33.10 3.95
4305 4363 2.012902 ATCGCCTCCCTAACCGAACG 62.013 60.000 0.00 0.00 33.10 3.95
4306 4364 2.703798 CGCCTCCCTAACCGAACGA 61.704 63.158 0.00 0.00 0.00 3.85
4307 4365 1.593265 GCCTCCCTAACCGAACGAA 59.407 57.895 0.00 0.00 0.00 3.85
4308 4366 0.037046 GCCTCCCTAACCGAACGAAA 60.037 55.000 0.00 0.00 0.00 3.46
4309 4367 1.718396 CCTCCCTAACCGAACGAAAC 58.282 55.000 0.00 0.00 0.00 2.78
4310 4368 1.274447 CCTCCCTAACCGAACGAAACT 59.726 52.381 0.00 0.00 0.00 2.66
4311 4369 2.289257 CCTCCCTAACCGAACGAAACTT 60.289 50.000 0.00 0.00 0.00 2.66
4312 4370 2.991866 CTCCCTAACCGAACGAAACTTC 59.008 50.000 0.00 0.00 0.00 3.01
4313 4371 2.071540 CCCTAACCGAACGAAACTTCC 58.928 52.381 0.00 0.00 0.00 3.46
4314 4372 1.723003 CCTAACCGAACGAAACTTCCG 59.277 52.381 0.00 0.00 0.00 4.30
4315 4373 2.607771 CCTAACCGAACGAAACTTCCGA 60.608 50.000 0.00 0.00 0.00 4.55
4316 4374 1.938625 AACCGAACGAAACTTCCGAA 58.061 45.000 0.00 0.00 0.00 4.30
4317 4375 1.494824 ACCGAACGAAACTTCCGAAG 58.505 50.000 6.59 6.59 0.00 3.79
4337 4395 6.952743 CGAAGGGATATTCTGAACAGATTTG 58.047 40.000 5.34 0.00 37.29 2.32
4338 4396 6.017605 CGAAGGGATATTCTGAACAGATTTGG 60.018 42.308 5.34 0.00 37.29 3.28
4339 4397 5.136105 AGGGATATTCTGAACAGATTTGGC 58.864 41.667 5.34 0.00 37.29 4.52
4340 4398 4.023707 GGGATATTCTGAACAGATTTGGCG 60.024 45.833 5.34 0.00 37.29 5.69
4341 4399 2.927553 ATTCTGAACAGATTTGGCGC 57.072 45.000 0.00 0.00 37.29 6.53
4342 4400 1.603456 TTCTGAACAGATTTGGCGCA 58.397 45.000 10.83 0.00 37.29 6.09
4343 4401 1.603456 TCTGAACAGATTTGGCGCAA 58.397 45.000 10.83 0.00 31.41 4.85
4344 4402 2.161855 TCTGAACAGATTTGGCGCAAT 58.838 42.857 10.83 0.00 31.41 3.56
4345 4403 2.557924 TCTGAACAGATTTGGCGCAATT 59.442 40.909 10.83 0.00 31.41 2.32
4346 4404 2.664568 CTGAACAGATTTGGCGCAATTG 59.335 45.455 10.83 0.00 0.00 2.32
4347 4405 2.035704 TGAACAGATTTGGCGCAATTGT 59.964 40.909 10.83 6.16 0.00 2.71
4348 4406 2.352503 ACAGATTTGGCGCAATTGTC 57.647 45.000 10.83 0.00 0.00 3.18
4349 4407 1.888512 ACAGATTTGGCGCAATTGTCT 59.111 42.857 10.83 2.48 0.00 3.41
4350 4408 2.297033 ACAGATTTGGCGCAATTGTCTT 59.703 40.909 10.83 0.00 0.00 3.01
4351 4409 3.505680 ACAGATTTGGCGCAATTGTCTTA 59.494 39.130 10.83 0.00 0.00 2.10
4352 4410 4.100529 CAGATTTGGCGCAATTGTCTTAG 58.899 43.478 10.83 0.00 0.00 2.18
4353 4411 3.129287 AGATTTGGCGCAATTGTCTTAGG 59.871 43.478 10.83 0.00 0.00 2.69
4354 4412 2.192664 TTGGCGCAATTGTCTTAGGA 57.807 45.000 10.83 0.00 0.00 2.94
4355 4413 1.448985 TGGCGCAATTGTCTTAGGAC 58.551 50.000 10.83 0.00 42.42 3.85
4362 4420 2.978824 TGTCTTAGGACAGGCGCC 59.021 61.111 21.89 21.89 46.19 6.53
4363 4421 2.187163 GTCTTAGGACAGGCGCCC 59.813 66.667 26.15 7.93 41.75 6.13
4364 4422 2.038975 TCTTAGGACAGGCGCCCT 59.961 61.111 26.15 15.97 36.60 5.19
4377 4435 2.280457 GCCCTGTAGCCAGCGATC 60.280 66.667 0.00 0.00 37.38 3.69
4378 4436 3.094062 GCCCTGTAGCCAGCGATCA 62.094 63.158 0.00 0.00 37.38 2.92
4379 4437 1.750930 CCCTGTAGCCAGCGATCAT 59.249 57.895 0.00 0.00 37.38 2.45
4380 4438 0.602106 CCCTGTAGCCAGCGATCATG 60.602 60.000 0.00 0.00 37.38 3.07
4381 4439 1.226686 CCTGTAGCCAGCGATCATGC 61.227 60.000 0.00 0.00 37.38 4.06
4382 4440 1.226686 CTGTAGCCAGCGATCATGCC 61.227 60.000 0.00 0.00 34.65 4.40
4383 4441 1.227645 GTAGCCAGCGATCATGCCA 60.228 57.895 0.00 0.00 34.65 4.92
4384 4442 0.815213 GTAGCCAGCGATCATGCCAA 60.815 55.000 0.00 0.00 34.65 4.52
4385 4443 0.107263 TAGCCAGCGATCATGCCAAA 60.107 50.000 0.00 0.00 34.65 3.28
4386 4444 0.966875 AGCCAGCGATCATGCCAAAA 60.967 50.000 0.00 0.00 34.65 2.44
4387 4445 0.108709 GCCAGCGATCATGCCAAAAA 60.109 50.000 0.00 0.00 34.65 1.94
4388 4446 1.632422 CCAGCGATCATGCCAAAAAC 58.368 50.000 0.00 0.00 34.65 2.43
4389 4447 1.203052 CCAGCGATCATGCCAAAAACT 59.797 47.619 0.00 0.00 34.65 2.66
4390 4448 2.353011 CCAGCGATCATGCCAAAAACTT 60.353 45.455 0.00 0.00 34.65 2.66
4391 4449 2.664568 CAGCGATCATGCCAAAAACTTG 59.335 45.455 0.00 0.00 34.65 3.16
4392 4450 1.391144 GCGATCATGCCAAAAACTTGC 59.609 47.619 0.00 0.00 0.00 4.01
4393 4451 1.994779 CGATCATGCCAAAAACTTGCC 59.005 47.619 0.00 0.00 0.00 4.52
4394 4452 2.609984 CGATCATGCCAAAAACTTGCCA 60.610 45.455 0.00 0.00 0.00 4.92
4395 4453 2.529780 TCATGCCAAAAACTTGCCAG 57.470 45.000 0.00 0.00 0.00 4.85
4396 4454 0.869730 CATGCCAAAAACTTGCCAGC 59.130 50.000 0.00 0.00 0.00 4.85
4397 4455 0.250424 ATGCCAAAAACTTGCCAGCC 60.250 50.000 0.00 0.00 0.00 4.85
4398 4456 1.336632 TGCCAAAAACTTGCCAGCCT 61.337 50.000 0.00 0.00 0.00 4.58
4399 4457 0.881600 GCCAAAAACTTGCCAGCCTG 60.882 55.000 0.00 0.00 0.00 4.85
4400 4458 0.881600 CCAAAAACTTGCCAGCCTGC 60.882 55.000 0.00 0.00 0.00 4.85
4401 4459 0.881600 CAAAAACTTGCCAGCCTGCC 60.882 55.000 0.00 0.00 0.00 4.85
4402 4460 2.367868 AAAAACTTGCCAGCCTGCCG 62.368 55.000 0.00 0.00 0.00 5.69
4403 4461 4.586235 AACTTGCCAGCCTGCCGT 62.586 61.111 0.00 0.00 0.00 5.68
4406 4464 4.349503 TTGCCAGCCTGCCGTCAT 62.350 61.111 0.00 0.00 0.00 3.06
4407 4465 3.866379 TTGCCAGCCTGCCGTCATT 62.866 57.895 0.00 0.00 0.00 2.57
4408 4466 3.064324 GCCAGCCTGCCGTCATTT 61.064 61.111 0.00 0.00 0.00 2.32
4409 4467 1.748879 GCCAGCCTGCCGTCATTTA 60.749 57.895 0.00 0.00 0.00 1.40
4410 4468 1.993369 GCCAGCCTGCCGTCATTTAC 61.993 60.000 0.00 0.00 0.00 2.01
4411 4469 0.676466 CCAGCCTGCCGTCATTTACA 60.676 55.000 0.00 0.00 0.00 2.41
4412 4470 0.729116 CAGCCTGCCGTCATTTACAG 59.271 55.000 0.00 0.00 0.00 2.74
4413 4471 0.324943 AGCCTGCCGTCATTTACAGT 59.675 50.000 0.00 0.00 0.00 3.55
4414 4472 0.447801 GCCTGCCGTCATTTACAGTG 59.552 55.000 0.00 0.00 0.00 3.66
4415 4473 1.943968 GCCTGCCGTCATTTACAGTGA 60.944 52.381 0.00 0.00 0.00 3.41
4416 4474 2.632377 CCTGCCGTCATTTACAGTGAT 58.368 47.619 0.00 0.00 0.00 3.06
4417 4475 3.009723 CCTGCCGTCATTTACAGTGATT 58.990 45.455 0.00 0.00 0.00 2.57
4418 4476 3.440173 CCTGCCGTCATTTACAGTGATTT 59.560 43.478 0.00 0.00 0.00 2.17
4419 4477 4.437390 CCTGCCGTCATTTACAGTGATTTC 60.437 45.833 0.00 0.00 0.00 2.17
4420 4478 4.068599 TGCCGTCATTTACAGTGATTTCA 58.931 39.130 0.00 0.00 0.00 2.69
4421 4479 4.154015 TGCCGTCATTTACAGTGATTTCAG 59.846 41.667 0.00 0.00 0.00 3.02
4422 4480 4.154195 GCCGTCATTTACAGTGATTTCAGT 59.846 41.667 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 5.651576 TGAATTGATGATCGTTGATGGGAAA 59.348 36.000 0.00 0.00 0.00 3.13
385 390 1.611491 GCCGTTTCCCTGAATCAACAA 59.389 47.619 0.00 0.00 0.00 2.83
464 469 1.214589 CAGGCCAATCACAGCTTGC 59.785 57.895 5.01 0.00 0.00 4.01
466 471 1.304713 CCCAGGCCAATCACAGCTT 60.305 57.895 5.01 0.00 0.00 3.74
469 474 0.911769 TAGTCCCAGGCCAATCACAG 59.088 55.000 5.01 0.00 0.00 3.66
532 537 3.896888 TGATTCAGTCCCAAAGTTGCAAT 59.103 39.130 0.59 0.00 0.00 3.56
535 540 3.507233 TGATGATTCAGTCCCAAAGTTGC 59.493 43.478 0.00 0.00 0.00 4.17
581 586 2.492088 TCATCGAGGTAATAGCATCCCG 59.508 50.000 0.00 0.00 0.00 5.14
585 590 6.997655 TCTCAAATCATCGAGGTAATAGCAT 58.002 36.000 0.00 0.00 0.00 3.79
588 593 7.881142 AGACTCTCAAATCATCGAGGTAATAG 58.119 38.462 0.00 0.00 0.00 1.73
598 603 7.030165 TCTTCAACGTAGACTCTCAAATCATC 58.970 38.462 0.00 0.00 0.00 2.92
599 604 6.925211 TCTTCAACGTAGACTCTCAAATCAT 58.075 36.000 0.00 0.00 0.00 2.45
614 619 5.661056 TCTTCTATGGACATCTTCAACGT 57.339 39.130 0.00 0.00 0.00 3.99
620 625 9.432982 AGACTTCTATTCTTCTATGGACATCTT 57.567 33.333 0.00 0.00 0.00 2.40
627 632 8.402798 TCTGCTAGACTTCTATTCTTCTATGG 57.597 38.462 0.00 0.00 0.00 2.74
628 633 9.066892 ACTCTGCTAGACTTCTATTCTTCTATG 57.933 37.037 0.00 0.00 0.00 2.23
629 634 9.640952 AACTCTGCTAGACTTCTATTCTTCTAT 57.359 33.333 0.00 0.00 0.00 1.98
630 635 9.116067 GAACTCTGCTAGACTTCTATTCTTCTA 57.884 37.037 0.00 0.00 0.00 2.10
631 636 7.613801 TGAACTCTGCTAGACTTCTATTCTTCT 59.386 37.037 0.00 0.00 0.00 2.85
632 637 7.767261 TGAACTCTGCTAGACTTCTATTCTTC 58.233 38.462 0.00 0.00 0.00 2.87
659 664 3.056749 GTGACGTGTCTTCCCTGAGTATT 60.057 47.826 0.00 0.00 0.00 1.89
664 669 0.387929 GTGTGACGTGTCTTCCCTGA 59.612 55.000 0.00 0.00 0.00 3.86
665 670 0.939577 CGTGTGACGTGTCTTCCCTG 60.940 60.000 0.00 0.00 36.74 4.45
682 687 3.561143 TCTATGCCATTTTTATGCCCGT 58.439 40.909 0.00 0.00 0.00 5.28
683 688 4.789012 ATCTATGCCATTTTTATGCCCG 57.211 40.909 0.00 0.00 0.00 6.13
684 689 5.928264 GTCAATCTATGCCATTTTTATGCCC 59.072 40.000 0.00 0.00 0.00 5.36
712 725 1.052287 GCGTTTGCAGGACGATTTTG 58.948 50.000 23.45 0.12 42.82 2.44
765 781 0.040499 TGGGTGGGATTTTACCTGGC 59.960 55.000 0.00 0.00 37.15 4.85
849 873 4.218686 GCTTGGGTGGGTGTGGGT 62.219 66.667 0.00 0.00 0.00 4.51
850 874 4.994756 GGCTTGGGTGGGTGTGGG 62.995 72.222 0.00 0.00 0.00 4.61
851 875 4.994756 GGGCTTGGGTGGGTGTGG 62.995 72.222 0.00 0.00 0.00 4.17
852 876 2.484287 CTAGGGCTTGGGTGGGTGTG 62.484 65.000 0.00 0.00 0.00 3.82
853 877 2.121689 TAGGGCTTGGGTGGGTGT 60.122 61.111 0.00 0.00 0.00 4.16
854 878 2.677228 CTAGGGCTTGGGTGGGTG 59.323 66.667 0.00 0.00 0.00 4.61
855 879 3.339093 GCTAGGGCTTGGGTGGGT 61.339 66.667 0.00 0.00 35.22 4.51
856 880 4.129148 GGCTAGGGCTTGGGTGGG 62.129 72.222 0.00 0.00 38.73 4.61
948 974 0.389948 GTTAGGTGCGAGAGTGGTGG 60.390 60.000 0.00 0.00 0.00 4.61
964 996 3.540617 TGTGCTCTGTTTTCTGCTGTTA 58.459 40.909 0.00 0.00 0.00 2.41
968 1000 3.445096 AGTTTTGTGCTCTGTTTTCTGCT 59.555 39.130 0.00 0.00 0.00 4.24
986 1018 1.454539 CGTCTGGTGGGGGAAGTTT 59.545 57.895 0.00 0.00 0.00 2.66
1020 1059 0.897621 GAGCTTGGGTTGGGGATTTG 59.102 55.000 0.00 0.00 0.00 2.32
1075 1114 1.795872 TGGTAAACGAATCGTGCTGTG 59.204 47.619 9.74 0.00 39.99 3.66
1076 1115 2.157834 TGGTAAACGAATCGTGCTGT 57.842 45.000 9.74 0.00 39.99 4.40
1082 1121 5.734855 AATGGAGATTGGTAAACGAATCG 57.265 39.130 0.00 0.00 43.13 3.34
1094 1133 4.796038 AACAAGCAGGAAATGGAGATTG 57.204 40.909 0.00 0.00 0.00 2.67
1101 1140 3.490526 CGAAACCAAACAAGCAGGAAATG 59.509 43.478 0.00 0.00 0.00 2.32
1138 1177 2.977808 TCCCCTAAAATTTGGGCACAA 58.022 42.857 0.00 0.00 41.21 3.33
1246 1286 4.250464 TGAATGGCTAAGTAACAAGACGG 58.750 43.478 0.00 0.00 0.00 4.79
1251 1291 7.568349 AGAGATCATGAATGGCTAAGTAACAA 58.432 34.615 0.00 0.00 0.00 2.83
1300 1340 4.806286 GCACCCTAAAGAAACAAGCTAGGA 60.806 45.833 0.00 0.00 32.39 2.94
1322 1364 2.027625 GTCATACTATGGCGCCCGC 61.028 63.158 26.77 3.71 41.06 6.13
1383 1425 1.523758 CTCACCAACAGCAGTAACCC 58.476 55.000 0.00 0.00 0.00 4.11
1418 1460 0.958822 CAAACCCTAGCGGCACTTTT 59.041 50.000 1.45 0.00 33.26 2.27
1419 1461 0.179001 ACAAACCCTAGCGGCACTTT 60.179 50.000 1.45 0.00 33.26 2.66
1533 1577 5.445964 TGCATATGGAGTCTGTCAGTACTA 58.554 41.667 4.56 0.00 0.00 1.82
1602 1646 4.819630 ACAGTAAGAACAAAGGCATCGAAA 59.180 37.500 0.00 0.00 0.00 3.46
1605 1649 4.749245 AACAGTAAGAACAAAGGCATCG 57.251 40.909 0.00 0.00 0.00 3.84
1611 1655 6.692681 CCACATCACAAACAGTAAGAACAAAG 59.307 38.462 0.00 0.00 0.00 2.77
1613 1657 5.650266 ACCACATCACAAACAGTAAGAACAA 59.350 36.000 0.00 0.00 0.00 2.83
1660 1704 2.038820 TCATCTCACTGCACCACAATCA 59.961 45.455 0.00 0.00 0.00 2.57
1840 1884 3.404773 GGTGAGGACCTCCAAGGG 58.595 66.667 19.11 0.00 40.58 3.95
1878 1922 0.445436 GCTCTGACAAGCAATCCACG 59.555 55.000 5.18 0.00 42.05 4.94
1992 2036 0.614812 TGCAGATGTCCAGCAGCTTA 59.385 50.000 0.00 0.00 41.72 3.09
2061 2105 3.119743 CCAACACATGCAGGACATACTTG 60.120 47.826 4.84 0.00 36.64 3.16
2094 2138 1.915614 GCTCCAATGACAGCACACCG 61.916 60.000 0.12 0.00 35.56 4.94
2102 2146 1.817357 CTTGAGCTGCTCCAATGACA 58.183 50.000 25.61 4.00 0.00 3.58
2178 2222 1.372251 CGTTGAGCAGCTGTCGAGT 60.372 57.895 16.64 0.00 0.00 4.18
2298 2342 0.969894 AGACGCTGCAGGTAAAGACT 59.030 50.000 17.12 2.17 0.00 3.24
2304 2348 0.602638 CCACAAAGACGCTGCAGGTA 60.603 55.000 17.12 0.00 0.00 3.08
2386 2430 0.964358 AGCTCATTGAAGGCCTGTGC 60.964 55.000 5.69 6.98 0.00 4.57
2403 2447 1.945394 CCACTGATGGTAGCATGAAGC 59.055 52.381 13.10 0.00 41.64 3.86
2412 2456 2.335681 TGACTTCCCCACTGATGGTA 57.664 50.000 0.00 0.00 45.66 3.25
2438 2482 5.264395 CTGAAACACTTCCCCTGGATAATT 58.736 41.667 0.00 0.00 0.00 1.40
2442 2486 1.272147 GCTGAAACACTTCCCCTGGAT 60.272 52.381 0.00 0.00 0.00 3.41
2448 2492 4.578928 TCTTTTACAGCTGAAACACTTCCC 59.421 41.667 23.35 0.00 0.00 3.97
2484 2528 0.109597 GTTTCCTGGCACATGCTTCG 60.110 55.000 3.48 0.00 41.70 3.79
2511 2555 1.548269 AGCTGAGCAGTCCTAGTCAAC 59.452 52.381 7.39 0.00 0.00 3.18
2555 2599 1.761449 TGAAAGGCTCACAGCACAAA 58.239 45.000 0.00 0.00 44.75 2.83
2565 2609 3.062042 CACCATTTGCTTTGAAAGGCTC 58.938 45.455 7.09 0.00 0.00 4.70
2635 2679 1.816537 GGCTACTGTCATCAGCCGA 59.183 57.895 8.63 0.00 44.99 5.54
2658 2702 5.672421 TCTCTGTCATGATCACTTCACAT 57.328 39.130 0.00 0.00 37.11 3.21
2681 2725 4.764050 TGTGTTCCTTCTTCAGTACCAA 57.236 40.909 0.00 0.00 0.00 3.67
2683 2727 4.957296 TCTTGTGTTCCTTCTTCAGTACC 58.043 43.478 0.00 0.00 0.00 3.34
2747 2797 1.923204 CACTGATACTCTCAAGCGTGC 59.077 52.381 0.00 0.00 32.14 5.34
2749 2799 3.759086 TCTTCACTGATACTCTCAAGCGT 59.241 43.478 0.00 0.00 32.14 5.07
2750 2800 4.362932 TCTTCACTGATACTCTCAAGCG 57.637 45.455 0.00 0.00 32.14 4.68
2773 2823 3.281727 TGCCCCACTTATCATCTTGTC 57.718 47.619 0.00 0.00 0.00 3.18
2778 2828 2.036346 GCCATTTGCCCCACTTATCATC 59.964 50.000 0.00 0.00 0.00 2.92
2780 2830 1.006998 AGCCATTTGCCCCACTTATCA 59.993 47.619 0.00 0.00 42.71 2.15
2781 2831 1.780503 AGCCATTTGCCCCACTTATC 58.219 50.000 0.00 0.00 42.71 1.75
2791 2841 0.726827 TCGTCGATGAAGCCATTTGC 59.273 50.000 4.45 0.00 41.71 3.68
2805 2855 3.269486 ACGATGGTCATATTCTCGTCG 57.731 47.619 0.00 0.00 38.05 5.12
2812 2862 4.895889 TCTCTCAGGAACGATGGTCATATT 59.104 41.667 0.00 0.00 0.00 1.28
2814 2864 3.898482 TCTCTCAGGAACGATGGTCATA 58.102 45.455 0.00 0.00 0.00 2.15
2816 2866 2.215942 TCTCTCAGGAACGATGGTCA 57.784 50.000 0.00 0.00 0.00 4.02
2817 2867 2.417515 GGTTCTCTCAGGAACGATGGTC 60.418 54.545 0.00 0.00 44.45 4.02
2824 2874 2.235898 AGATGCTGGTTCTCTCAGGAAC 59.764 50.000 0.00 0.00 43.24 3.62
2841 2891 3.004315 GCTCTTCTCTACCTTCCGAGATG 59.996 52.174 0.00 0.00 36.29 2.90
2853 2903 2.098614 CAGTCCAGCAGCTCTTCTCTA 58.901 52.381 0.00 0.00 0.00 2.43
2908 2958 2.119484 AACGAATCCAACCCGAGCCA 62.119 55.000 0.00 0.00 0.00 4.75
2931 2981 0.317479 AGAAGTCCCCGACTCGTTTG 59.683 55.000 0.00 0.00 42.59 2.93
2991 3041 2.158856 TGCTGCATCTGACATCCTTAGG 60.159 50.000 0.00 0.00 0.00 2.69
3102 3157 2.677003 GCGGTGTACAAGCATGCGT 61.677 57.895 13.01 6.07 0.00 5.24
3130 3185 4.767255 GAGCAGGGACCGCCACAG 62.767 72.222 0.00 0.00 35.15 3.66
3137 3192 3.005539 TGAGGCTGAGCAGGGACC 61.006 66.667 6.82 0.00 0.00 4.46
3138 3193 2.267324 GTGAGGCTGAGCAGGGAC 59.733 66.667 6.82 0.00 0.00 4.46
3139 3194 3.005539 GGTGAGGCTGAGCAGGGA 61.006 66.667 6.82 0.00 0.00 4.20
3212 3267 0.174617 CAACCCCACACAACACAACC 59.825 55.000 0.00 0.00 0.00 3.77
3274 3329 7.918536 ATTTGTCTACTACTTCTACTCGTCA 57.081 36.000 0.00 0.00 0.00 4.35
3275 3330 8.334632 GGTATTTGTCTACTACTTCTACTCGTC 58.665 40.741 0.00 0.00 0.00 4.20
3276 3331 7.010923 CGGTATTTGTCTACTACTTCTACTCGT 59.989 40.741 0.00 0.00 0.00 4.18
3301 3359 2.732366 ACTGCACGCTAATATGACTCG 58.268 47.619 0.00 0.00 0.00 4.18
3309 3367 2.430694 TCCACTGATACTGCACGCTAAT 59.569 45.455 0.00 0.00 0.00 1.73
3310 3368 1.822371 TCCACTGATACTGCACGCTAA 59.178 47.619 0.00 0.00 0.00 3.09
3314 3372 2.621338 ACATTCCACTGATACTGCACG 58.379 47.619 0.00 0.00 0.00 5.34
3404 3462 4.142381 GCTTTGCCCTTTAAGGTACATCTG 60.142 45.833 10.40 3.24 31.93 2.90
3412 3470 2.893489 ACTTCTGCTTTGCCCTTTAAGG 59.107 45.455 3.57 3.57 34.30 2.69
3414 3472 3.832527 AGACTTCTGCTTTGCCCTTTAA 58.167 40.909 0.00 0.00 0.00 1.52
3426 3484 4.094146 GCAAGATACCTCAAAGACTTCTGC 59.906 45.833 0.00 0.00 0.00 4.26
3427 3485 4.328440 CGCAAGATACCTCAAAGACTTCTG 59.672 45.833 0.00 0.00 43.02 3.02
3428 3486 4.021016 ACGCAAGATACCTCAAAGACTTCT 60.021 41.667 0.00 0.00 43.62 2.85
3429 3487 4.246458 ACGCAAGATACCTCAAAGACTTC 58.754 43.478 0.00 0.00 43.62 3.01
3478 3536 6.932356 TCTGATCAATGAATTTGGTAGAGC 57.068 37.500 0.00 0.00 35.92 4.09
3479 3537 7.013083 CCCTTCTGATCAATGAATTTGGTAGAG 59.987 40.741 0.00 0.00 35.92 2.43
3505 3563 0.868406 GCACCTGCTGTACTGTGTTC 59.132 55.000 1.46 0.00 38.21 3.18
3673 3731 3.354948 TCAGGACAAATGGATGGACAG 57.645 47.619 0.00 0.00 0.00 3.51
3709 3767 3.423154 GGAACTGTTGGGCGAGCG 61.423 66.667 0.00 0.00 0.00 5.03
3718 3776 0.111253 CTTGCCTCCTGGGAACTGTT 59.889 55.000 0.00 0.00 38.80 3.16
3817 3875 2.502142 TCTAGCTGGACGGACACTAA 57.498 50.000 0.00 0.00 0.00 2.24
3837 3895 2.789409 ATCTGCCTTCGCTAAAACCT 57.211 45.000 0.00 0.00 35.36 3.50
3901 3959 2.033801 CCTTTCACCTGCTTGTTGAGTG 59.966 50.000 0.00 0.00 0.00 3.51
3944 4002 2.143925 ACAGCTACTTTTGTCCGCTTC 58.856 47.619 0.00 0.00 37.26 3.86
3949 4007 3.634910 TGGGAAAACAGCTACTTTTGTCC 59.365 43.478 6.11 7.84 0.00 4.02
3961 4019 1.971695 GACGGGGCTGGGAAAACAG 60.972 63.158 0.00 0.00 41.41 3.16
4015 4073 2.093235 GCTTCTTCCTATGGACTGCTGT 60.093 50.000 0.00 0.00 0.00 4.40
4016 4074 2.559440 GCTTCTTCCTATGGACTGCTG 58.441 52.381 0.00 0.00 0.00 4.41
4017 4075 1.137872 CGCTTCTTCCTATGGACTGCT 59.862 52.381 0.00 0.00 0.00 4.24
4018 4076 1.576356 CGCTTCTTCCTATGGACTGC 58.424 55.000 0.00 0.00 0.00 4.40
4019 4077 1.808133 GCCGCTTCTTCCTATGGACTG 60.808 57.143 0.00 0.00 0.00 3.51
4020 4078 0.466124 GCCGCTTCTTCCTATGGACT 59.534 55.000 0.00 0.00 0.00 3.85
4021 4079 0.178068 TGCCGCTTCTTCCTATGGAC 59.822 55.000 0.00 0.00 0.00 4.02
4022 4080 0.178068 GTGCCGCTTCTTCCTATGGA 59.822 55.000 0.00 0.00 0.00 3.41
4023 4081 0.179000 AGTGCCGCTTCTTCCTATGG 59.821 55.000 0.00 0.00 0.00 2.74
4024 4082 1.667724 CAAGTGCCGCTTCTTCCTATG 59.332 52.381 0.00 0.00 34.69 2.23
4025 4083 2.014068 GCAAGTGCCGCTTCTTCCTAT 61.014 52.381 0.00 0.00 34.69 2.57
4026 4084 0.673644 GCAAGTGCCGCTTCTTCCTA 60.674 55.000 0.00 0.00 34.69 2.94
4027 4085 1.968540 GCAAGTGCCGCTTCTTCCT 60.969 57.895 0.00 0.00 34.69 3.36
4028 4086 2.563427 GCAAGTGCCGCTTCTTCC 59.437 61.111 0.00 0.00 34.69 3.46
4038 4096 4.666253 TGGGCTCCTGGCAAGTGC 62.666 66.667 1.60 1.60 44.01 4.40
4039 4097 2.674380 GTGGGCTCCTGGCAAGTG 60.674 66.667 0.00 0.00 44.01 3.16
4040 4098 3.177884 TGTGGGCTCCTGGCAAGT 61.178 61.111 0.00 0.00 44.01 3.16
4041 4099 2.674380 GTGTGGGCTCCTGGCAAG 60.674 66.667 0.00 0.00 44.01 4.01
4042 4100 3.496309 CTGTGTGGGCTCCTGGCAA 62.496 63.158 0.00 0.00 44.01 4.52
4043 4101 3.957586 CTGTGTGGGCTCCTGGCA 61.958 66.667 0.00 0.00 44.01 4.92
4045 4103 4.729918 GGCTGTGTGGGCTCCTGG 62.730 72.222 0.00 0.00 0.00 4.45
4046 4104 4.729918 GGGCTGTGTGGGCTCCTG 62.730 72.222 0.00 0.00 0.00 3.86
4049 4107 4.269523 TGTGGGCTGTGTGGGCTC 62.270 66.667 0.00 0.00 0.00 4.70
4050 4108 4.275508 CTGTGGGCTGTGTGGGCT 62.276 66.667 0.00 0.00 0.00 5.19
4051 4109 3.190738 TACTGTGGGCTGTGTGGGC 62.191 63.158 0.00 0.00 0.00 5.36
4052 4110 1.302511 GTACTGTGGGCTGTGTGGG 60.303 63.158 0.00 0.00 0.00 4.61
4053 4111 0.320771 GAGTACTGTGGGCTGTGTGG 60.321 60.000 0.00 0.00 0.00 4.17
4054 4112 0.681733 AGAGTACTGTGGGCTGTGTG 59.318 55.000 0.00 0.00 0.00 3.82
4055 4113 0.681733 CAGAGTACTGTGGGCTGTGT 59.318 55.000 12.14 0.00 39.11 3.72
4056 4114 0.036952 CCAGAGTACTGTGGGCTGTG 60.037 60.000 27.55 4.43 40.06 3.66
4057 4115 1.831652 GCCAGAGTACTGTGGGCTGT 61.832 60.000 33.40 0.00 43.58 4.40
4058 4116 1.078848 GCCAGAGTACTGTGGGCTG 60.079 63.158 33.40 18.58 43.58 4.85
4059 4117 3.393360 GCCAGAGTACTGTGGGCT 58.607 61.111 33.40 8.12 43.58 5.19
4061 4119 2.579201 CGGCCAGAGTACTGTGGG 59.421 66.667 33.40 18.39 43.58 4.61
4062 4120 2.125512 GCGGCCAGAGTACTGTGG 60.126 66.667 30.09 30.09 45.89 4.17
4063 4121 0.737715 GAAGCGGCCAGAGTACTGTG 60.738 60.000 12.98 12.98 42.05 3.66
4064 4122 1.592223 GAAGCGGCCAGAGTACTGT 59.408 57.895 0.00 0.00 42.05 3.55
4065 4123 1.153549 GGAAGCGGCCAGAGTACTG 60.154 63.158 0.00 0.00 43.12 2.74
4066 4124 2.711922 CGGAAGCGGCCAGAGTACT 61.712 63.158 2.24 0.00 0.00 2.73
4067 4125 2.202756 CGGAAGCGGCCAGAGTAC 60.203 66.667 2.24 0.00 0.00 2.73
4068 4126 3.458163 CCGGAAGCGGCCAGAGTA 61.458 66.667 2.24 0.00 0.00 2.59
4085 4143 3.950794 TTCACGGGATCGGTGCAGC 62.951 63.158 5.64 5.64 41.39 5.25
4086 4144 2.100631 GTTCACGGGATCGGTGCAG 61.101 63.158 9.90 0.00 41.39 4.41
4087 4145 2.047655 GTTCACGGGATCGGTGCA 60.048 61.111 9.90 0.00 41.39 4.57
4088 4146 2.100631 CAGTTCACGGGATCGGTGC 61.101 63.158 9.90 0.00 41.39 5.01
4089 4147 2.100631 GCAGTTCACGGGATCGGTG 61.101 63.158 8.75 8.75 41.39 4.94
4090 4148 2.107041 TTGCAGTTCACGGGATCGGT 62.107 55.000 0.00 0.00 41.39 4.69
4091 4149 0.953471 TTTGCAGTTCACGGGATCGG 60.953 55.000 0.00 0.00 41.39 4.18
4092 4150 0.871722 TTTTGCAGTTCACGGGATCG 59.128 50.000 0.00 0.00 43.02 3.69
4093 4151 2.151202 TCTTTTGCAGTTCACGGGATC 58.849 47.619 0.00 0.00 0.00 3.36
4094 4152 2.270352 TCTTTTGCAGTTCACGGGAT 57.730 45.000 0.00 0.00 0.00 3.85
4095 4153 2.270352 ATCTTTTGCAGTTCACGGGA 57.730 45.000 0.00 0.00 0.00 5.14
4096 4154 2.420022 CCTATCTTTTGCAGTTCACGGG 59.580 50.000 0.00 0.00 0.00 5.28
4097 4155 2.159517 GCCTATCTTTTGCAGTTCACGG 60.160 50.000 0.00 0.00 0.00 4.94
4098 4156 2.744202 AGCCTATCTTTTGCAGTTCACG 59.256 45.455 0.00 0.00 0.00 4.35
4099 4157 3.753272 TCAGCCTATCTTTTGCAGTTCAC 59.247 43.478 0.00 0.00 0.00 3.18
4100 4158 4.019792 TCAGCCTATCTTTTGCAGTTCA 57.980 40.909 0.00 0.00 0.00 3.18
4101 4159 4.880696 AGATCAGCCTATCTTTTGCAGTTC 59.119 41.667 0.00 0.00 32.09 3.01
4102 4160 4.853007 AGATCAGCCTATCTTTTGCAGTT 58.147 39.130 0.00 0.00 32.09 3.16
4103 4161 4.500499 AGATCAGCCTATCTTTTGCAGT 57.500 40.909 0.00 0.00 32.09 4.40
4104 4162 4.451774 GCTAGATCAGCCTATCTTTTGCAG 59.548 45.833 3.91 0.00 45.23 4.41
4105 4163 4.384056 GCTAGATCAGCCTATCTTTTGCA 58.616 43.478 3.91 0.00 45.23 4.08
4128 4186 5.385198 TCAACCAAAGCCAAGAATACTCTT 58.615 37.500 0.00 0.00 42.96 2.85
4129 4187 4.985538 TCAACCAAAGCCAAGAATACTCT 58.014 39.130 0.00 0.00 0.00 3.24
4130 4188 5.705609 TTCAACCAAAGCCAAGAATACTC 57.294 39.130 0.00 0.00 0.00 2.59
4131 4189 5.106157 CGATTCAACCAAAGCCAAGAATACT 60.106 40.000 0.00 0.00 0.00 2.12
4132 4190 5.095490 CGATTCAACCAAAGCCAAGAATAC 58.905 41.667 0.00 0.00 0.00 1.89
4133 4191 4.380444 GCGATTCAACCAAAGCCAAGAATA 60.380 41.667 0.00 0.00 0.00 1.75
4134 4192 3.614870 GCGATTCAACCAAAGCCAAGAAT 60.615 43.478 0.00 0.00 0.00 2.40
4135 4193 2.288152 GCGATTCAACCAAAGCCAAGAA 60.288 45.455 0.00 0.00 0.00 2.52
4136 4194 1.269448 GCGATTCAACCAAAGCCAAGA 59.731 47.619 0.00 0.00 0.00 3.02
4137 4195 1.669795 GGCGATTCAACCAAAGCCAAG 60.670 52.381 0.00 0.00 40.06 3.61
4138 4196 0.316841 GGCGATTCAACCAAAGCCAA 59.683 50.000 0.00 0.00 40.06 4.52
4139 4197 0.825425 TGGCGATTCAACCAAAGCCA 60.825 50.000 2.56 2.56 44.77 4.75
4140 4198 0.316841 TTGGCGATTCAACCAAAGCC 59.683 50.000 5.83 0.00 42.87 4.35
4141 4199 3.883997 TTGGCGATTCAACCAAAGC 57.116 47.368 5.83 0.00 42.87 3.51
4144 4202 1.309950 TCGTTTGGCGATTCAACCAA 58.690 45.000 4.45 4.45 45.68 3.67
4145 4203 3.008141 TCGTTTGGCGATTCAACCA 57.992 47.368 0.00 0.00 45.68 3.67
4154 4212 1.261619 GCCTGATAAGATCGTTTGGCG 59.738 52.381 0.00 0.00 43.01 5.69
4155 4213 1.261619 CGCCTGATAAGATCGTTTGGC 59.738 52.381 0.00 0.00 33.69 4.52
4156 4214 2.285220 CACGCCTGATAAGATCGTTTGG 59.715 50.000 0.00 0.00 0.00 3.28
4157 4215 2.285834 GCACGCCTGATAAGATCGTTTG 60.286 50.000 0.00 0.00 0.00 2.93
4158 4216 1.933853 GCACGCCTGATAAGATCGTTT 59.066 47.619 0.00 0.00 0.00 3.60
4159 4217 1.571919 GCACGCCTGATAAGATCGTT 58.428 50.000 0.00 0.00 0.00 3.85
4160 4218 0.249489 GGCACGCCTGATAAGATCGT 60.249 55.000 0.00 0.00 0.00 3.73
4161 4219 0.249447 TGGCACGCCTGATAAGATCG 60.249 55.000 9.92 0.00 36.94 3.69
4162 4220 2.072298 GATGGCACGCCTGATAAGATC 58.928 52.381 9.92 0.00 36.94 2.75
4163 4221 1.606480 CGATGGCACGCCTGATAAGAT 60.606 52.381 9.92 0.00 36.94 2.40
4164 4222 0.249447 CGATGGCACGCCTGATAAGA 60.249 55.000 9.92 0.00 36.94 2.10
4165 4223 0.249447 TCGATGGCACGCCTGATAAG 60.249 55.000 9.92 0.00 36.94 1.73
4166 4224 0.529773 GTCGATGGCACGCCTGATAA 60.530 55.000 9.92 0.00 36.94 1.75
4167 4225 1.067416 GTCGATGGCACGCCTGATA 59.933 57.895 9.92 0.00 36.94 2.15
4168 4226 2.202932 GTCGATGGCACGCCTGAT 60.203 61.111 9.92 0.00 36.94 2.90
4169 4227 4.451150 GGTCGATGGCACGCCTGA 62.451 66.667 9.92 1.99 36.94 3.86
4170 4228 4.758251 TGGTCGATGGCACGCCTG 62.758 66.667 9.92 0.00 36.94 4.85
4171 4229 4.457496 CTGGTCGATGGCACGCCT 62.457 66.667 9.92 0.00 36.94 5.52
4174 4232 2.557059 TACTGCTGGTCGATGGCACG 62.557 60.000 0.00 0.00 32.33 5.34
4175 4233 1.084370 GTACTGCTGGTCGATGGCAC 61.084 60.000 0.00 0.00 32.33 5.01
4176 4234 1.218047 GTACTGCTGGTCGATGGCA 59.782 57.895 9.00 9.00 34.66 4.92
4177 4235 0.807667 CTGTACTGCTGGTCGATGGC 60.808 60.000 0.00 0.00 0.00 4.40
4178 4236 0.817654 TCTGTACTGCTGGTCGATGG 59.182 55.000 0.00 0.00 0.00 3.51
4179 4237 1.474478 ACTCTGTACTGCTGGTCGATG 59.526 52.381 0.00 0.00 0.00 3.84
4180 4238 1.746220 GACTCTGTACTGCTGGTCGAT 59.254 52.381 0.00 0.00 0.00 3.59
4181 4239 1.166129 GACTCTGTACTGCTGGTCGA 58.834 55.000 0.00 0.00 0.00 4.20
4182 4240 0.171455 GGACTCTGTACTGCTGGTCG 59.829 60.000 0.00 0.00 0.00 4.79
4183 4241 1.203523 CTGGACTCTGTACTGCTGGTC 59.796 57.143 0.00 3.60 0.00 4.02
4184 4242 1.203063 TCTGGACTCTGTACTGCTGGT 60.203 52.381 0.00 0.00 0.00 4.00
4185 4243 1.550327 TCTGGACTCTGTACTGCTGG 58.450 55.000 0.00 0.00 0.00 4.85
4186 4244 2.094286 CCTTCTGGACTCTGTACTGCTG 60.094 54.545 0.00 0.00 34.57 4.41
4187 4245 2.175202 CCTTCTGGACTCTGTACTGCT 58.825 52.381 0.00 0.00 34.57 4.24
4188 4246 1.205893 CCCTTCTGGACTCTGTACTGC 59.794 57.143 0.00 0.00 35.39 4.40
4189 4247 2.808919 TCCCTTCTGGACTCTGTACTG 58.191 52.381 0.00 0.00 38.61 2.74
4190 4248 3.436243 CTTCCCTTCTGGACTCTGTACT 58.564 50.000 0.00 0.00 45.11 2.73
4191 4249 2.093921 GCTTCCCTTCTGGACTCTGTAC 60.094 54.545 0.00 0.00 45.11 2.90
4192 4250 2.180276 GCTTCCCTTCTGGACTCTGTA 58.820 52.381 0.00 0.00 45.11 2.74
4193 4251 0.980423 GCTTCCCTTCTGGACTCTGT 59.020 55.000 0.00 0.00 45.11 3.41
4194 4252 0.979665 TGCTTCCCTTCTGGACTCTG 59.020 55.000 0.00 0.00 45.11 3.35
4195 4253 1.274712 CTGCTTCCCTTCTGGACTCT 58.725 55.000 0.00 0.00 45.11 3.24
4196 4254 0.251634 CCTGCTTCCCTTCTGGACTC 59.748 60.000 0.00 0.00 45.11 3.36
4197 4255 1.846712 GCCTGCTTCCCTTCTGGACT 61.847 60.000 0.00 0.00 45.11 3.85
4198 4256 1.377856 GCCTGCTTCCCTTCTGGAC 60.378 63.158 0.00 0.00 45.11 4.02
4199 4257 2.606587 GGCCTGCTTCCCTTCTGGA 61.607 63.158 0.00 0.00 43.18 3.86
4200 4258 2.044551 GGCCTGCTTCCCTTCTGG 60.045 66.667 0.00 0.00 0.00 3.86
4201 4259 2.437359 CGGCCTGCTTCCCTTCTG 60.437 66.667 0.00 0.00 0.00 3.02
4202 4260 4.416738 GCGGCCTGCTTCCCTTCT 62.417 66.667 11.61 0.00 41.73 2.85
4206 4264 4.770874 TTACGCGGCCTGCTTCCC 62.771 66.667 12.47 0.00 43.27 3.97
4207 4265 3.195698 CTTACGCGGCCTGCTTCC 61.196 66.667 12.47 0.00 43.27 3.46
4208 4266 3.865830 GCTTACGCGGCCTGCTTC 61.866 66.667 12.47 0.00 43.27 3.86
4209 4267 4.394712 AGCTTACGCGGCCTGCTT 62.395 61.111 12.47 10.15 43.27 3.91
4210 4268 4.821589 GAGCTTACGCGGCCTGCT 62.822 66.667 12.47 14.43 43.27 4.24
4212 4270 2.202932 ATGAGCTTACGCGGCCTG 60.203 61.111 12.47 0.00 42.32 4.85
4213 4271 2.107141 GATGAGCTTACGCGGCCT 59.893 61.111 12.47 0.00 42.32 5.19
4214 4272 2.967615 GGATGAGCTTACGCGGCC 60.968 66.667 12.47 0.00 42.32 6.13
4215 4273 2.967615 GGGATGAGCTTACGCGGC 60.968 66.667 12.47 3.95 42.32 6.53
4216 4274 2.280186 GGGGATGAGCTTACGCGG 60.280 66.667 12.47 0.00 42.32 6.46
4217 4275 2.280186 GGGGGATGAGCTTACGCG 60.280 66.667 3.53 3.53 42.32 6.01
4218 4276 0.603975 GATGGGGGATGAGCTTACGC 60.604 60.000 0.00 0.00 0.00 4.42
4219 4277 0.035458 GGATGGGGGATGAGCTTACG 59.965 60.000 0.00 0.00 0.00 3.18
4220 4278 0.402121 GGGATGGGGGATGAGCTTAC 59.598 60.000 0.00 0.00 0.00 2.34
4221 4279 0.029163 TGGGATGGGGGATGAGCTTA 60.029 55.000 0.00 0.00 0.00 3.09
4222 4280 0.703758 ATGGGATGGGGGATGAGCTT 60.704 55.000 0.00 0.00 0.00 3.74
4223 4281 1.072380 ATGGGATGGGGGATGAGCT 60.072 57.895 0.00 0.00 0.00 4.09
4224 4282 1.381851 GATGGGATGGGGGATGAGC 59.618 63.158 0.00 0.00 0.00 4.26
4225 4283 1.845627 CGGATGGGATGGGGGATGAG 61.846 65.000 0.00 0.00 0.00 2.90
4226 4284 1.847506 CGGATGGGATGGGGGATGA 60.848 63.158 0.00 0.00 0.00 2.92
4227 4285 2.156098 ACGGATGGGATGGGGGATG 61.156 63.158 0.00 0.00 0.00 3.51
4228 4286 2.156098 CACGGATGGGATGGGGGAT 61.156 63.158 0.00 0.00 0.00 3.85
4229 4287 2.772191 CACGGATGGGATGGGGGA 60.772 66.667 0.00 0.00 0.00 4.81
4230 4288 2.772191 TCACGGATGGGATGGGGG 60.772 66.667 0.00 0.00 0.00 5.40
4231 4289 2.822637 CCTCACGGATGGGATGGGG 61.823 68.421 0.00 0.00 0.00 4.96
4232 4290 2.831770 CCTCACGGATGGGATGGG 59.168 66.667 0.00 0.00 0.00 4.00
4233 4291 2.111878 GCCTCACGGATGGGATGG 59.888 66.667 0.00 0.00 0.00 3.51
4234 4292 2.111878 GGCCTCACGGATGGGATG 59.888 66.667 0.00 0.00 0.00 3.51
4235 4293 3.550431 CGGCCTCACGGATGGGAT 61.550 66.667 0.00 0.00 0.00 3.85
4237 4295 4.838152 CACGGCCTCACGGATGGG 62.838 72.222 0.00 0.00 38.39 4.00
4252 4310 4.838486 CTCCTCGACCTCGCGCAC 62.838 72.222 8.75 0.00 39.60 5.34
4256 4314 3.492311 GATGGCTCCTCGACCTCGC 62.492 68.421 0.00 0.00 39.60 5.03
4257 4315 1.826054 AGATGGCTCCTCGACCTCG 60.826 63.158 0.00 0.00 41.45 4.63
4258 4316 1.040339 ACAGATGGCTCCTCGACCTC 61.040 60.000 0.00 0.00 0.00 3.85
4259 4317 1.000993 ACAGATGGCTCCTCGACCT 59.999 57.895 0.00 0.00 0.00 3.85
4260 4318 1.439644 GACAGATGGCTCCTCGACC 59.560 63.158 0.00 0.00 0.00 4.79
4261 4319 1.064946 CGACAGATGGCTCCTCGAC 59.935 63.158 0.00 0.00 0.00 4.20
4262 4320 0.965866 AACGACAGATGGCTCCTCGA 60.966 55.000 0.00 0.00 0.00 4.04
4263 4321 0.738975 TAACGACAGATGGCTCCTCG 59.261 55.000 0.00 0.00 0.00 4.63
4264 4322 2.748605 CATAACGACAGATGGCTCCTC 58.251 52.381 0.00 0.00 0.00 3.71
4265 4323 1.202580 GCATAACGACAGATGGCTCCT 60.203 52.381 0.00 0.00 0.00 3.69
4266 4324 1.221414 GCATAACGACAGATGGCTCC 58.779 55.000 0.00 0.00 0.00 4.70
4267 4325 1.939974 TGCATAACGACAGATGGCTC 58.060 50.000 0.00 0.00 0.00 4.70
4268 4326 2.487934 GATGCATAACGACAGATGGCT 58.512 47.619 0.00 0.00 0.00 4.75
4269 4327 1.193203 CGATGCATAACGACAGATGGC 59.807 52.381 0.00 0.00 0.00 4.40
4270 4328 1.193203 GCGATGCATAACGACAGATGG 59.807 52.381 11.60 0.00 0.00 3.51
4271 4329 1.193203 GGCGATGCATAACGACAGATG 59.807 52.381 11.60 0.00 37.49 2.90
4272 4330 1.069204 AGGCGATGCATAACGACAGAT 59.931 47.619 15.25 0.00 40.24 2.90
4273 4331 0.459899 AGGCGATGCATAACGACAGA 59.540 50.000 15.25 0.00 40.24 3.41
4274 4332 0.855349 GAGGCGATGCATAACGACAG 59.145 55.000 15.25 0.00 40.24 3.51
4275 4333 0.529773 GGAGGCGATGCATAACGACA 60.530 55.000 15.25 0.00 40.24 4.35
4276 4334 1.222115 GGGAGGCGATGCATAACGAC 61.222 60.000 11.60 8.68 37.85 4.34
4277 4335 1.069090 GGGAGGCGATGCATAACGA 59.931 57.895 11.60 0.00 0.00 3.85
4278 4336 0.317160 TAGGGAGGCGATGCATAACG 59.683 55.000 0.00 0.30 0.00 3.18
4279 4337 2.143925 GTTAGGGAGGCGATGCATAAC 58.856 52.381 0.00 0.00 38.91 1.89
4280 4338 1.071699 GGTTAGGGAGGCGATGCATAA 59.928 52.381 0.00 0.00 0.00 1.90
4281 4339 0.685097 GGTTAGGGAGGCGATGCATA 59.315 55.000 0.00 0.00 0.00 3.14
4282 4340 1.451936 GGTTAGGGAGGCGATGCAT 59.548 57.895 0.00 0.00 0.00 3.96
4283 4341 2.908015 GGTTAGGGAGGCGATGCA 59.092 61.111 0.00 0.00 0.00 3.96
4284 4342 2.280186 CGGTTAGGGAGGCGATGC 60.280 66.667 0.00 0.00 0.00 3.91
4285 4343 0.529992 GTTCGGTTAGGGAGGCGATG 60.530 60.000 0.00 0.00 0.00 3.84
4286 4344 1.821258 GTTCGGTTAGGGAGGCGAT 59.179 57.895 0.00 0.00 0.00 4.58
4287 4345 2.703798 CGTTCGGTTAGGGAGGCGA 61.704 63.158 0.00 0.00 0.00 5.54
4288 4346 2.202703 CGTTCGGTTAGGGAGGCG 60.203 66.667 0.00 0.00 0.00 5.52
4289 4347 0.037046 TTTCGTTCGGTTAGGGAGGC 60.037 55.000 0.00 0.00 0.00 4.70
4290 4348 1.274447 AGTTTCGTTCGGTTAGGGAGG 59.726 52.381 0.00 0.00 0.00 4.30
4291 4349 2.738013 AGTTTCGTTCGGTTAGGGAG 57.262 50.000 0.00 0.00 0.00 4.30
4292 4350 2.289010 GGAAGTTTCGTTCGGTTAGGGA 60.289 50.000 0.00 0.00 0.00 4.20
4293 4351 2.071540 GGAAGTTTCGTTCGGTTAGGG 58.928 52.381 0.00 0.00 0.00 3.53
4294 4352 1.723003 CGGAAGTTTCGTTCGGTTAGG 59.277 52.381 0.00 0.00 0.00 2.69
4295 4353 2.664916 TCGGAAGTTTCGTTCGGTTAG 58.335 47.619 2.92 0.00 0.00 2.34
4296 4354 2.791383 TCGGAAGTTTCGTTCGGTTA 57.209 45.000 2.92 0.00 0.00 2.85
4297 4355 1.862827 CTTCGGAAGTTTCGTTCGGTT 59.137 47.619 9.61 0.00 0.00 4.44
4298 4356 1.494824 CTTCGGAAGTTTCGTTCGGT 58.505 50.000 9.61 0.00 0.00 4.69
4299 4357 0.788391 CCTTCGGAAGTTTCGTTCGG 59.212 55.000 16.07 0.00 0.00 4.30
4300 4358 0.788391 CCCTTCGGAAGTTTCGTTCG 59.212 55.000 16.07 0.00 0.00 3.95
4301 4359 2.159327 TCCCTTCGGAAGTTTCGTTC 57.841 50.000 16.07 0.00 34.19 3.95
4302 4360 2.853235 ATCCCTTCGGAAGTTTCGTT 57.147 45.000 16.07 0.00 43.10 3.85
4303 4361 4.161754 AGAATATCCCTTCGGAAGTTTCGT 59.838 41.667 16.07 1.33 43.10 3.85
4304 4362 4.508124 CAGAATATCCCTTCGGAAGTTTCG 59.492 45.833 16.07 0.00 43.10 3.46
4305 4363 5.671493 TCAGAATATCCCTTCGGAAGTTTC 58.329 41.667 16.07 10.38 43.10 2.78
4306 4364 5.693769 TCAGAATATCCCTTCGGAAGTTT 57.306 39.130 16.07 3.76 43.10 2.66
4307 4365 5.045869 TGTTCAGAATATCCCTTCGGAAGTT 60.046 40.000 16.07 3.85 43.10 2.66
4308 4366 4.469945 TGTTCAGAATATCCCTTCGGAAGT 59.530 41.667 16.07 1.13 43.10 3.01
4309 4367 5.023533 TGTTCAGAATATCCCTTCGGAAG 57.976 43.478 10.82 10.82 43.10 3.46
4310 4368 4.714802 TCTGTTCAGAATATCCCTTCGGAA 59.285 41.667 0.00 0.00 43.10 4.30
4311 4369 4.286707 TCTGTTCAGAATATCCCTTCGGA 58.713 43.478 0.00 0.00 44.33 4.55
4312 4370 4.672587 TCTGTTCAGAATATCCCTTCGG 57.327 45.455 0.00 0.00 0.00 4.30
4313 4371 6.017605 CCAAATCTGTTCAGAATATCCCTTCG 60.018 42.308 6.60 0.00 0.00 3.79
4314 4372 6.238869 GCCAAATCTGTTCAGAATATCCCTTC 60.239 42.308 6.60 0.00 0.00 3.46
4315 4373 5.595952 GCCAAATCTGTTCAGAATATCCCTT 59.404 40.000 6.60 0.00 0.00 3.95
4316 4374 5.136105 GCCAAATCTGTTCAGAATATCCCT 58.864 41.667 6.60 0.00 0.00 4.20
4317 4375 4.023707 CGCCAAATCTGTTCAGAATATCCC 60.024 45.833 6.60 0.00 0.00 3.85
4318 4376 4.555511 GCGCCAAATCTGTTCAGAATATCC 60.556 45.833 6.60 0.00 0.00 2.59
4319 4377 4.035558 TGCGCCAAATCTGTTCAGAATATC 59.964 41.667 4.18 0.00 0.00 1.63
4320 4378 3.947196 TGCGCCAAATCTGTTCAGAATAT 59.053 39.130 4.18 0.00 0.00 1.28
4321 4379 3.342719 TGCGCCAAATCTGTTCAGAATA 58.657 40.909 4.18 0.00 0.00 1.75
4322 4380 2.161855 TGCGCCAAATCTGTTCAGAAT 58.838 42.857 4.18 0.00 0.00 2.40
4323 4381 1.603456 TGCGCCAAATCTGTTCAGAA 58.397 45.000 4.18 0.00 0.00 3.02
4324 4382 1.603456 TTGCGCCAAATCTGTTCAGA 58.397 45.000 4.18 4.96 0.00 3.27
4325 4383 2.642139 ATTGCGCCAAATCTGTTCAG 57.358 45.000 4.18 0.00 0.00 3.02
4326 4384 2.035704 ACAATTGCGCCAAATCTGTTCA 59.964 40.909 4.18 0.00 0.00 3.18
4327 4385 2.663119 GACAATTGCGCCAAATCTGTTC 59.337 45.455 4.18 0.00 0.00 3.18
4328 4386 2.297033 AGACAATTGCGCCAAATCTGTT 59.703 40.909 4.18 0.00 0.00 3.16
4329 4387 1.888512 AGACAATTGCGCCAAATCTGT 59.111 42.857 4.18 6.48 0.00 3.41
4330 4388 2.642139 AGACAATTGCGCCAAATCTG 57.358 45.000 4.18 3.40 0.00 2.90
4331 4389 3.129287 CCTAAGACAATTGCGCCAAATCT 59.871 43.478 4.18 0.00 0.00 2.40
4332 4390 3.128589 TCCTAAGACAATTGCGCCAAATC 59.871 43.478 4.18 0.00 0.00 2.17
4333 4391 3.088532 TCCTAAGACAATTGCGCCAAAT 58.911 40.909 4.18 0.00 0.00 2.32
4334 4392 2.227865 GTCCTAAGACAATTGCGCCAAA 59.772 45.455 4.18 0.00 42.99 3.28
4335 4393 1.810151 GTCCTAAGACAATTGCGCCAA 59.190 47.619 4.18 0.00 42.99 4.52
4336 4394 1.448985 GTCCTAAGACAATTGCGCCA 58.551 50.000 4.18 0.00 42.99 5.69
4346 4404 2.187163 GGGCGCCTGTCCTAAGAC 59.813 66.667 28.56 0.41 43.83 3.01
4362 4420 1.226686 GCATGATCGCTGGCTACAGG 61.227 60.000 0.00 0.00 45.04 4.00
4364 4422 1.227645 GGCATGATCGCTGGCTACA 60.228 57.895 12.65 0.00 36.34 2.74
4365 4423 0.815213 TTGGCATGATCGCTGGCTAC 60.815 55.000 18.41 0.00 39.72 3.58
4366 4424 0.107263 TTTGGCATGATCGCTGGCTA 60.107 50.000 18.41 11.00 39.72 3.93
4367 4425 0.966875 TTTTGGCATGATCGCTGGCT 60.967 50.000 18.41 0.00 39.72 4.75
4368 4426 0.108709 TTTTTGGCATGATCGCTGGC 60.109 50.000 12.94 12.94 39.47 4.85
4369 4427 1.203052 AGTTTTTGGCATGATCGCTGG 59.797 47.619 0.00 0.00 0.00 4.85
4370 4428 2.642139 AGTTTTTGGCATGATCGCTG 57.358 45.000 0.00 0.00 0.00 5.18
4371 4429 2.927871 GCAAGTTTTTGGCATGATCGCT 60.928 45.455 0.00 0.00 34.79 4.93
4372 4430 1.391144 GCAAGTTTTTGGCATGATCGC 59.609 47.619 0.00 0.00 34.79 4.58
4381 4439 0.881600 GCAGGCTGGCAAGTTTTTGG 60.882 55.000 17.64 0.00 34.79 3.28
4382 4440 0.881600 GGCAGGCTGGCAAGTTTTTG 60.882 55.000 33.28 0.00 43.14 2.44
4383 4441 1.447217 GGCAGGCTGGCAAGTTTTT 59.553 52.632 33.28 0.00 43.14 1.94
4384 4442 2.859981 CGGCAGGCTGGCAAGTTTT 61.860 57.895 35.76 0.00 43.94 2.43
4385 4443 3.297620 CGGCAGGCTGGCAAGTTT 61.298 61.111 35.76 0.00 43.94 2.66
4386 4444 4.586235 ACGGCAGGCTGGCAAGTT 62.586 61.111 35.76 17.07 43.94 2.66
4389 4447 3.866379 AATGACGGCAGGCTGGCAA 62.866 57.895 35.76 22.91 44.45 4.52
4390 4448 2.476852 TAAATGACGGCAGGCTGGCA 62.477 55.000 35.76 20.45 45.48 4.92
4391 4449 1.748879 TAAATGACGGCAGGCTGGC 60.749 57.895 29.40 29.40 39.85 4.85
4392 4450 0.676466 TGTAAATGACGGCAGGCTGG 60.676 55.000 17.64 2.59 0.00 4.85
4393 4451 0.729116 CTGTAAATGACGGCAGGCTG 59.271 55.000 10.94 10.94 0.00 4.85
4394 4452 0.324943 ACTGTAAATGACGGCAGGCT 59.675 50.000 0.00 0.00 38.06 4.58
4395 4453 0.447801 CACTGTAAATGACGGCAGGC 59.552 55.000 0.00 0.00 38.06 4.85
4396 4454 2.093306 TCACTGTAAATGACGGCAGG 57.907 50.000 0.00 0.00 38.06 4.85
4397 4455 4.154015 TGAAATCACTGTAAATGACGGCAG 59.846 41.667 0.00 0.00 38.06 4.85
4398 4456 4.068599 TGAAATCACTGTAAATGACGGCA 58.931 39.130 0.00 0.00 38.06 5.69
4399 4457 4.154195 ACTGAAATCACTGTAAATGACGGC 59.846 41.667 0.00 0.00 38.06 5.68
4400 4458 5.390885 CCACTGAAATCACTGTAAATGACGG 60.391 44.000 0.00 0.00 40.66 4.79
4401 4459 5.621422 CCACTGAAATCACTGTAAATGACG 58.379 41.667 0.00 0.00 0.00 4.35
4402 4460 5.393962 GCCACTGAAATCACTGTAAATGAC 58.606 41.667 0.00 0.00 0.00 3.06
4403 4461 4.458989 GGCCACTGAAATCACTGTAAATGA 59.541 41.667 0.00 0.00 0.00 2.57
4404 4462 4.218200 TGGCCACTGAAATCACTGTAAATG 59.782 41.667 0.00 0.00 0.00 2.32
4405 4463 4.406456 TGGCCACTGAAATCACTGTAAAT 58.594 39.130 0.00 0.00 0.00 1.40
4406 4464 3.826524 TGGCCACTGAAATCACTGTAAA 58.173 40.909 0.00 0.00 0.00 2.01
4407 4465 3.500448 TGGCCACTGAAATCACTGTAA 57.500 42.857 0.00 0.00 0.00 2.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.