Multiple sequence alignment - TraesCS1A01G176500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G176500 chr1A 100.000 6912 0 0 1 6912 315840419 315833508 0.000000e+00 12765.0
1 TraesCS1A01G176500 chr1A 75.067 750 128 46 3747 4459 157831444 157830717 1.890000e-75 294.0
2 TraesCS1A01G176500 chr1A 95.000 140 7 0 6773 6912 12421106 12420967 3.250000e-53 220.0
3 TraesCS1A01G176500 chr1D 98.287 1635 23 3 2888 4518 232346451 232348084 0.000000e+00 2859.0
4 TraesCS1A01G176500 chr1D 96.158 1718 38 7 4629 6346 232348085 232349774 0.000000e+00 2782.0
5 TraesCS1A01G176500 chr1D 97.635 888 20 1 2006 2892 232345512 232346399 0.000000e+00 1522.0
6 TraesCS1A01G176500 chr1D 93.990 832 26 7 892 1716 232344144 232344958 0.000000e+00 1238.0
7 TraesCS1A01G176500 chr1D 94.000 350 17 2 6426 6771 232349915 232350264 1.710000e-145 527.0
8 TraesCS1A01G176500 chr1D 76.429 560 101 28 3919 4459 131148250 131148797 2.460000e-69 274.0
9 TraesCS1A01G176500 chr1D 96.269 134 4 1 1817 1949 232344956 232345089 1.170000e-52 219.0
10 TraesCS1A01G176500 chr1D 96.460 113 2 1 1713 1823 222916452 222916564 1.180000e-42 185.0
11 TraesCS1A01G176500 chr1D 97.619 84 2 0 6289 6372 232349830 232349913 2.010000e-30 145.0
12 TraesCS1A01G176500 chr1D 94.253 87 3 2 501 587 59015247 59015331 1.560000e-26 132.0
13 TraesCS1A01G176500 chr1D 97.143 70 2 0 504 573 463082486 463082417 1.220000e-22 119.0
14 TraesCS1A01G176500 chr1B 95.928 1719 58 6 4629 6346 367440861 367442568 0.000000e+00 2776.0
15 TraesCS1A01G176500 chr1B 97.368 1634 31 7 2888 4516 367439236 367440862 0.000000e+00 2769.0
16 TraesCS1A01G176500 chr1B 95.847 915 30 7 1984 2892 367438271 367439183 0.000000e+00 1472.0
17 TraesCS1A01G176500 chr1B 95.006 801 26 6 930 1716 367437036 367437836 0.000000e+00 1245.0
18 TraesCS1A01G176500 chr1B 74.734 752 129 47 3747 4459 206033480 206034209 5.280000e-71 279.0
19 TraesCS1A01G176500 chr1B 95.683 139 4 2 6290 6428 367442628 367442764 9.020000e-54 222.0
20 TraesCS1A01G176500 chr1B 86.747 166 11 4 6426 6581 367442995 367443159 2.560000e-39 174.0
21 TraesCS1A01G176500 chr1B 96.078 102 3 1 1817 1917 367437834 367437935 1.540000e-36 165.0
22 TraesCS1A01G176500 chr7A 93.423 897 45 4 1 895 243645178 243644294 0.000000e+00 1317.0
23 TraesCS1A01G176500 chr7A 91.601 381 21 7 523 893 718314847 718315226 3.700000e-142 516.0
24 TraesCS1A01G176500 chr7A 83.626 342 33 8 174 504 125467973 125467644 4.050000e-77 300.0
25 TraesCS1A01G176500 chr7A 96.581 117 4 0 4515 4631 217722878 217722994 1.970000e-45 195.0
26 TraesCS1A01G176500 chr7A 96.491 114 2 1 1715 1826 381253923 381254036 3.290000e-43 187.0
27 TraesCS1A01G176500 chr7A 95.690 116 5 0 4515 4630 720942197 720942082 3.290000e-43 187.0
28 TraesCS1A01G176500 chr7A 100.000 40 0 0 134 173 125469528 125469489 2.670000e-09 75.0
29 TraesCS1A01G176500 chr3B 95.775 568 21 3 329 893 64503044 64502477 0.000000e+00 913.0
30 TraesCS1A01G176500 chr3B 97.308 260 7 0 1 260 64503299 64503040 6.360000e-120 442.0
31 TraesCS1A01G176500 chr3B 95.070 142 7 0 6771 6912 41426469 41426328 2.510000e-54 224.0
32 TraesCS1A01G176500 chr2B 98.444 257 4 0 1 257 177546249 177546505 2.940000e-123 453.0
33 TraesCS1A01G176500 chr2B 91.212 330 21 4 566 893 683382242 683382565 6.360000e-120 442.0
34 TraesCS1A01G176500 chr2B 94.937 237 11 1 323 558 177546498 177546734 3.050000e-98 370.0
35 TraesCS1A01G176500 chr2B 92.827 237 16 1 658 893 177547050 177547286 6.640000e-90 342.0
36 TraesCS1A01G176500 chr2B 94.915 118 6 0 4514 4631 305325119 305325236 1.180000e-42 185.0
37 TraesCS1A01G176500 chr2B 90.780 141 10 3 4493 4630 441076932 441077072 1.180000e-42 185.0
38 TraesCS1A01G176500 chr6A 94.014 284 13 2 613 895 461807323 461807043 1.780000e-115 427.0
39 TraesCS1A01G176500 chr7B 88.922 334 31 4 176 504 82689880 82689548 2.320000e-109 407.0
40 TraesCS1A01G176500 chr7B 100.000 39 0 0 134 172 82691511 82691473 9.620000e-09 73.1
41 TraesCS1A01G176500 chrUn 92.674 273 19 1 624 895 88056951 88056679 6.500000e-105 392.0
42 TraesCS1A01G176500 chr5D 92.647 272 15 3 592 861 531453393 531453661 3.020000e-103 387.0
43 TraesCS1A01G176500 chr7D 86.471 340 35 8 174 504 120527128 120526791 5.100000e-96 363.0
44 TraesCS1A01G176500 chr7D 93.496 123 7 1 4514 4636 177118778 177118657 1.530000e-41 182.0
45 TraesCS1A01G176500 chr6D 88.141 312 18 7 587 895 97136765 97136470 3.070000e-93 353.0
46 TraesCS1A01G176500 chr6D 93.548 124 4 3 1714 1834 431047762 431047640 1.530000e-41 182.0
47 TraesCS1A01G176500 chr6D 93.182 88 4 2 501 588 19712796 19712881 2.020000e-25 128.0
48 TraesCS1A01G176500 chr6D 97.619 42 1 0 501 542 97137219 97137178 9.620000e-09 73.1
49 TraesCS1A01G176500 chr3A 95.775 142 6 0 6771 6912 669949001 669949142 5.390000e-56 230.0
50 TraesCS1A01G176500 chr3A 96.377 138 5 0 6775 6912 635154372 635154235 1.940000e-55 228.0
51 TraesCS1A01G176500 chr3A 94.262 122 4 2 1715 1833 265543444 265543323 4.260000e-42 183.0
52 TraesCS1A01G176500 chr5A 96.377 138 5 0 6775 6912 598982491 598982354 1.940000e-55 228.0
53 TraesCS1A01G176500 chr5A 93.421 152 9 1 6762 6912 586591468 586591317 2.510000e-54 224.0
54 TraesCS1A01G176500 chr5A 89.796 147 9 4 1698 1841 9470784 9470927 4.260000e-42 183.0
55 TraesCS1A01G176500 chr5A 92.742 124 9 0 4510 4633 115018757 115018634 5.510000e-41 180.0
56 TraesCS1A01G176500 chr4D 94.521 146 8 0 6767 6912 442392831 442392686 6.980000e-55 226.0
57 TraesCS1A01G176500 chr2A 95.070 142 7 0 6771 6912 387541362 387541503 2.510000e-54 224.0
58 TraesCS1A01G176500 chr2A 92.617 149 11 0 6764 6912 45307365 45307513 1.510000e-51 215.0
59 TraesCS1A01G176500 chr2A 95.690 116 5 0 4515 4630 757643700 757643585 3.290000e-43 187.0
60 TraesCS1A01G176500 chr4A 93.701 127 8 0 4504 4630 187572220 187572346 2.540000e-44 191.0
61 TraesCS1A01G176500 chr4A 97.321 112 1 1 1713 1822 628491118 628491007 9.150000e-44 189.0
62 TraesCS1A01G176500 chr4A 92.248 129 7 3 4515 4641 541364359 541364232 5.510000e-41 180.0
63 TraesCS1A01G176500 chr5B 95.726 117 2 2 1706 1820 679807041 679806926 1.180000e-42 185.0
64 TraesCS1A01G176500 chr3D 95.690 116 3 1 1713 1826 350668497 350668382 1.180000e-42 185.0
65 TraesCS1A01G176500 chr2D 93.651 126 5 2 1715 1837 87031083 87030958 1.180000e-42 185.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G176500 chr1A 315833508 315840419 6911 True 12765.000000 12765 100.000000 1 6912 1 chr1A.!!$R3 6911
1 TraesCS1A01G176500 chr1A 157830717 157831444 727 True 294.000000 294 75.067000 3747 4459 1 chr1A.!!$R2 712
2 TraesCS1A01G176500 chr1D 232344144 232350264 6120 False 1327.428571 2859 96.279714 892 6771 7 chr1D.!!$F4 5879
3 TraesCS1A01G176500 chr1D 131148250 131148797 547 False 274.000000 274 76.429000 3919 4459 1 chr1D.!!$F2 540
4 TraesCS1A01G176500 chr1B 367437036 367443159 6123 False 1260.428571 2776 94.665286 930 6581 7 chr1B.!!$F2 5651
5 TraesCS1A01G176500 chr1B 206033480 206034209 729 False 279.000000 279 74.734000 3747 4459 1 chr1B.!!$F1 712
6 TraesCS1A01G176500 chr7A 243644294 243645178 884 True 1317.000000 1317 93.423000 1 895 1 chr7A.!!$R1 894
7 TraesCS1A01G176500 chr3B 64502477 64503299 822 True 677.500000 913 96.541500 1 893 2 chr3B.!!$R2 892
8 TraesCS1A01G176500 chr2B 177546249 177547286 1037 False 388.333333 453 95.402667 1 893 3 chr2B.!!$F4 892
9 TraesCS1A01G176500 chr7B 82689548 82691511 1963 True 240.050000 407 94.461000 134 504 2 chr7B.!!$R1 370
10 TraesCS1A01G176500 chr6D 97136470 97137219 749 True 213.050000 353 92.880000 501 895 2 chr6D.!!$R2 394

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
768 2733 0.469144 ATGTGTTTTCGGGTTGGGCT 60.469 50.0 0.00 0.00 0.00 5.19 F
1493 3475 0.107410 AAATCCCCATCGCGCAACTA 60.107 50.0 8.75 0.00 0.00 2.24 F
1959 3943 0.037734 GGAGTTTACAGGGTGGGGTG 59.962 60.0 0.00 0.00 0.00 4.61 F
1960 3944 0.037734 GAGTTTACAGGGTGGGGTGG 59.962 60.0 0.00 0.00 0.00 4.61 F
1963 3947 0.104037 TTTACAGGGTGGGGTGGGTA 60.104 55.0 0.00 0.00 0.00 3.69 F
1974 3958 0.178944 GGGTGGGTACTTGGGCTTTT 60.179 55.0 0.00 0.00 0.00 2.27 F
1975 3959 1.712056 GGTGGGTACTTGGGCTTTTT 58.288 50.0 0.00 0.00 0.00 1.94 F
3804 6218 0.470766 TAAGCAACAACGGTGAGGGT 59.529 50.0 7.88 0.27 0.00 4.34 F
4262 6703 0.323999 AGGCTTGCATGGCTTGATGA 60.324 50.0 21.22 0.00 40.00 2.92 F
4626 7071 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.0 13.64 4.95 46.06 4.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1801 3784 0.038744 ACTACTCCCTCCGTTCCGAA 59.961 55.000 0.00 0.0 0.00 4.30 R
2561 4915 1.953686 GTAGCCCTGCAACAGTTTCAA 59.046 47.619 0.00 0.0 0.00 2.69 R
2975 5388 2.264813 TGTCGGCTCGCATTACTAAAC 58.735 47.619 0.00 0.0 0.00 2.01 R
3048 5461 4.261741 CCCCAAATTGAAAGATGCCTATCG 60.262 45.833 0.00 0.0 38.38 2.92 R
3292 5706 6.710295 TCCTCACGATTTTTCTCAAGAAATCA 59.290 34.615 6.05 0.0 42.83 2.57 R
3626 6040 6.782150 TGAGAGATACCATACGCATTATACG 58.218 40.000 0.00 0.0 0.00 3.06 R
4111 6548 1.862827 CCTGCAAAGCTCAAAAACAGC 59.137 47.619 0.00 0.0 37.12 4.40 R
4607 7052 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.0 44.66 2.12 R
5350 7803 0.174845 TTGTAATCTCGGTCCCTGCG 59.825 55.000 0.00 0.0 0.00 5.18 R
5975 8428 0.323360 AGCAACCACGCCCATGTTAT 60.323 50.000 0.00 0.0 0.00 1.89 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 1.905637 AGGACGGACAAATTTGACCC 58.094 50.000 26.80 22.20 39.36 4.46
180 1770 2.644676 GATGAACCAAGAACTAGGCCC 58.355 52.381 0.00 0.00 0.00 5.80
308 1898 3.013921 GGGGCACGAAGAAATTCATACA 58.986 45.455 0.00 0.00 0.00 2.29
313 1903 5.106712 GGCACGAAGAAATTCATACAGACAA 60.107 40.000 0.00 0.00 0.00 3.18
323 1913 3.814625 TCATACAGACAACAGGCAACAA 58.185 40.909 0.00 0.00 41.41 2.83
499 2094 4.015406 AACGCATCACCTCCGGCA 62.015 61.111 0.00 0.00 0.00 5.69
702 2667 1.075542 CGTCGTTGCTAGGATTGCAA 58.924 50.000 0.00 0.00 46.48 4.08
730 2695 1.338107 CTGTTTTCCTCCCAAACCCC 58.662 55.000 0.00 0.00 33.83 4.95
768 2733 0.469144 ATGTGTTTTCGGGTTGGGCT 60.469 50.000 0.00 0.00 0.00 5.19
880 2848 7.630534 ACAGATTTAAGGGTTTAGGGGTACTAT 59.369 37.037 0.00 0.00 0.00 2.12
908 2876 8.854117 AGAAATGCTCTAACATGTTTTTCTTCT 58.146 29.630 17.78 12.28 30.22 2.85
1119 3101 1.154205 CGATGATGCGGAACCAGGAC 61.154 60.000 0.00 0.00 0.00 3.85
1195 3177 3.701604 CTCGTAAGCCTTCGCCGCT 62.702 63.158 0.00 0.00 38.53 5.52
1349 3331 4.680237 CTGTTCGAGCCACGGCCA 62.680 66.667 2.24 0.00 43.17 5.36
1493 3475 0.107410 AAATCCCCATCGCGCAACTA 60.107 50.000 8.75 0.00 0.00 2.24
1551 3533 2.690497 TGTTTTTGATCGGTTTGCAGGA 59.310 40.909 0.00 0.00 0.00 3.86
1570 3552 2.927477 GGAATGTCGCAGTTTGTATCGA 59.073 45.455 0.00 0.00 0.00 3.59
1642 3624 4.828829 CGAGACTAGGGTATGTTTTTGGT 58.171 43.478 0.00 0.00 0.00 3.67
1713 3696 3.081804 GGTATCCTTGTCCCAAGTTGTG 58.918 50.000 1.45 0.00 0.00 3.33
1714 3697 3.497942 GGTATCCTTGTCCCAAGTTGTGT 60.498 47.826 1.45 0.00 0.00 3.72
1715 3698 4.263156 GGTATCCTTGTCCCAAGTTGTGTA 60.263 45.833 1.45 0.00 0.00 2.90
1716 3699 3.202829 TCCTTGTCCCAAGTTGTGTAC 57.797 47.619 1.45 0.00 0.00 2.90
1717 3700 2.775384 TCCTTGTCCCAAGTTGTGTACT 59.225 45.455 1.45 0.00 39.32 2.73
1718 3701 3.139077 CCTTGTCCCAAGTTGTGTACTC 58.861 50.000 1.45 0.00 35.54 2.59
1719 3702 2.922740 TGTCCCAAGTTGTGTACTCC 57.077 50.000 1.45 0.00 35.54 3.85
1720 3703 1.418637 TGTCCCAAGTTGTGTACTCCC 59.581 52.381 1.45 0.00 35.54 4.30
1721 3704 1.697982 GTCCCAAGTTGTGTACTCCCT 59.302 52.381 1.45 0.00 35.54 4.20
1722 3705 1.975680 TCCCAAGTTGTGTACTCCCTC 59.024 52.381 1.45 0.00 35.54 4.30
1723 3706 1.003233 CCCAAGTTGTGTACTCCCTCC 59.997 57.143 1.45 0.00 35.54 4.30
1724 3707 1.337823 CCAAGTTGTGTACTCCCTCCG 60.338 57.143 1.45 0.00 35.54 4.63
1725 3708 1.343465 CAAGTTGTGTACTCCCTCCGT 59.657 52.381 0.00 0.00 35.54 4.69
1726 3709 1.713297 AGTTGTGTACTCCCTCCGTT 58.287 50.000 0.00 0.00 28.23 4.44
1727 3710 1.617357 AGTTGTGTACTCCCTCCGTTC 59.383 52.381 0.00 0.00 28.23 3.95
1728 3711 0.971386 TTGTGTACTCCCTCCGTTCC 59.029 55.000 0.00 0.00 0.00 3.62
1729 3712 0.178955 TGTGTACTCCCTCCGTTCCA 60.179 55.000 0.00 0.00 0.00 3.53
1730 3713 0.971386 GTGTACTCCCTCCGTTCCAA 59.029 55.000 0.00 0.00 0.00 3.53
1731 3714 1.345415 GTGTACTCCCTCCGTTCCAAA 59.655 52.381 0.00 0.00 0.00 3.28
1732 3715 2.027469 GTGTACTCCCTCCGTTCCAAAT 60.027 50.000 0.00 0.00 0.00 2.32
1733 3716 2.640826 TGTACTCCCTCCGTTCCAAATT 59.359 45.455 0.00 0.00 0.00 1.82
1734 3717 3.839490 TGTACTCCCTCCGTTCCAAATTA 59.161 43.478 0.00 0.00 0.00 1.40
1735 3718 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
1736 3719 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
1737 3720 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
1738 3721 2.093869 TCCCTCCGTTCCAAATTACTCG 60.094 50.000 0.00 0.00 0.00 4.18
1739 3722 2.354403 CCCTCCGTTCCAAATTACTCGT 60.354 50.000 0.00 0.00 0.00 4.18
1740 3723 3.332034 CCTCCGTTCCAAATTACTCGTT 58.668 45.455 0.00 0.00 0.00 3.85
1741 3724 3.124636 CCTCCGTTCCAAATTACTCGTTG 59.875 47.826 0.00 0.00 0.00 4.10
1742 3725 2.481185 TCCGTTCCAAATTACTCGTTGC 59.519 45.455 0.00 0.00 0.00 4.17
1743 3726 2.224549 CCGTTCCAAATTACTCGTTGCA 59.775 45.455 0.00 0.00 0.00 4.08
1744 3727 3.479006 CGTTCCAAATTACTCGTTGCAG 58.521 45.455 0.00 0.00 0.00 4.41
1745 3728 3.185594 CGTTCCAAATTACTCGTTGCAGA 59.814 43.478 0.00 0.00 0.00 4.26
1746 3729 4.319190 CGTTCCAAATTACTCGTTGCAGAA 60.319 41.667 0.00 0.00 0.00 3.02
1747 3730 5.516090 GTTCCAAATTACTCGTTGCAGAAA 58.484 37.500 0.00 0.00 0.00 2.52
1748 3731 5.957842 TCCAAATTACTCGTTGCAGAAAT 57.042 34.783 0.00 0.00 0.00 2.17
1749 3732 5.698832 TCCAAATTACTCGTTGCAGAAATG 58.301 37.500 0.00 0.00 0.00 2.32
1750 3733 4.858692 CCAAATTACTCGTTGCAGAAATGG 59.141 41.667 0.00 0.00 0.00 3.16
1751 3734 5.335583 CCAAATTACTCGTTGCAGAAATGGA 60.336 40.000 0.00 0.00 0.00 3.41
1752 3735 6.324819 CAAATTACTCGTTGCAGAAATGGAT 58.675 36.000 0.00 0.00 0.00 3.41
1753 3736 4.944962 TTACTCGTTGCAGAAATGGATG 57.055 40.909 0.00 0.00 0.00 3.51
1754 3737 2.783135 ACTCGTTGCAGAAATGGATGT 58.217 42.857 0.00 0.00 0.00 3.06
1755 3738 3.937814 ACTCGTTGCAGAAATGGATGTA 58.062 40.909 0.00 0.00 0.00 2.29
1756 3739 4.517285 ACTCGTTGCAGAAATGGATGTAT 58.483 39.130 0.00 0.00 0.00 2.29
1757 3740 4.572389 ACTCGTTGCAGAAATGGATGTATC 59.428 41.667 0.00 0.00 0.00 2.24
1758 3741 4.769688 TCGTTGCAGAAATGGATGTATCT 58.230 39.130 0.00 0.00 0.00 1.98
1759 3742 5.912892 TCGTTGCAGAAATGGATGTATCTA 58.087 37.500 0.00 0.00 0.00 1.98
1760 3743 5.985530 TCGTTGCAGAAATGGATGTATCTAG 59.014 40.000 0.00 0.00 0.00 2.43
1761 3744 5.985530 CGTTGCAGAAATGGATGTATCTAGA 59.014 40.000 0.00 0.00 0.00 2.43
1762 3745 6.479990 CGTTGCAGAAATGGATGTATCTAGAA 59.520 38.462 0.00 0.00 0.00 2.10
1763 3746 7.517417 CGTTGCAGAAATGGATGTATCTAGAAC 60.517 40.741 0.00 0.00 0.00 3.01
1764 3747 7.129457 TGCAGAAATGGATGTATCTAGAACT 57.871 36.000 0.00 0.00 0.00 3.01
1765 3748 8.250143 TGCAGAAATGGATGTATCTAGAACTA 57.750 34.615 0.00 0.00 0.00 2.24
1766 3749 8.704668 TGCAGAAATGGATGTATCTAGAACTAA 58.295 33.333 0.00 0.00 0.00 2.24
1767 3750 9.547753 GCAGAAATGGATGTATCTAGAACTAAA 57.452 33.333 0.00 0.00 0.00 1.85
1788 3771 9.871238 ACTAAAATACATCGATACATCCATACC 57.129 33.333 0.00 0.00 0.00 2.73
1790 3773 8.777865 AAAATACATCGATACATCCATACCTG 57.222 34.615 0.00 0.00 0.00 4.00
1791 3774 4.193826 ACATCGATACATCCATACCTGC 57.806 45.455 0.00 0.00 0.00 4.85
1792 3775 3.182182 CATCGATACATCCATACCTGCG 58.818 50.000 0.00 0.00 0.00 5.18
1793 3776 2.510613 TCGATACATCCATACCTGCGA 58.489 47.619 0.00 0.00 0.00 5.10
1794 3777 2.228103 TCGATACATCCATACCTGCGAC 59.772 50.000 0.00 0.00 0.00 5.19
1795 3778 2.030274 CGATACATCCATACCTGCGACA 60.030 50.000 0.00 0.00 0.00 4.35
1796 3779 3.552068 CGATACATCCATACCTGCGACAA 60.552 47.826 0.00 0.00 0.00 3.18
1797 3780 2.315925 ACATCCATACCTGCGACAAG 57.684 50.000 0.00 0.00 0.00 3.16
1798 3781 1.555075 ACATCCATACCTGCGACAAGT 59.445 47.619 0.00 0.00 0.00 3.16
1799 3782 2.764010 ACATCCATACCTGCGACAAGTA 59.236 45.455 0.00 0.00 0.00 2.24
1800 3783 3.196901 ACATCCATACCTGCGACAAGTAA 59.803 43.478 0.00 0.00 0.00 2.24
1801 3784 4.141711 ACATCCATACCTGCGACAAGTAAT 60.142 41.667 0.00 0.00 0.00 1.89
1802 3785 4.481368 TCCATACCTGCGACAAGTAATT 57.519 40.909 0.00 0.00 0.00 1.40
1803 3786 4.439057 TCCATACCTGCGACAAGTAATTC 58.561 43.478 0.00 0.00 0.00 2.17
1804 3787 3.245284 CCATACCTGCGACAAGTAATTCG 59.755 47.826 0.00 0.00 38.31 3.34
1805 3788 1.722011 ACCTGCGACAAGTAATTCGG 58.278 50.000 0.00 0.00 35.73 4.30
1806 3789 1.274167 ACCTGCGACAAGTAATTCGGA 59.726 47.619 0.00 0.00 35.73 4.55
1807 3790 2.289195 ACCTGCGACAAGTAATTCGGAA 60.289 45.455 0.00 0.00 35.02 4.30
1808 3791 2.093783 CCTGCGACAAGTAATTCGGAAC 59.906 50.000 0.00 0.00 35.02 3.62
1868 3851 1.386533 ATGTGCAGGCATTCTGTAGC 58.613 50.000 0.00 0.00 45.08 3.58
1920 3904 6.950619 TGTGCTCATGATCATATAGTACCTCT 59.049 38.462 23.65 0.00 0.00 3.69
1951 3935 8.050778 TGCAATTATGTTTAGGAGTTTACAGG 57.949 34.615 0.00 0.00 0.00 4.00
1952 3936 7.122055 TGCAATTATGTTTAGGAGTTTACAGGG 59.878 37.037 0.00 0.00 0.00 4.45
1953 3937 7.122204 GCAATTATGTTTAGGAGTTTACAGGGT 59.878 37.037 0.00 0.00 0.00 4.34
1954 3938 8.458843 CAATTATGTTTAGGAGTTTACAGGGTG 58.541 37.037 0.00 0.00 0.00 4.61
1955 3939 4.360951 TGTTTAGGAGTTTACAGGGTGG 57.639 45.455 0.00 0.00 0.00 4.61
1956 3940 3.073356 TGTTTAGGAGTTTACAGGGTGGG 59.927 47.826 0.00 0.00 0.00 4.61
1957 3941 1.961133 TAGGAGTTTACAGGGTGGGG 58.039 55.000 0.00 0.00 0.00 4.96
1958 3942 0.104090 AGGAGTTTACAGGGTGGGGT 60.104 55.000 0.00 0.00 0.00 4.95
1959 3943 0.037734 GGAGTTTACAGGGTGGGGTG 59.962 60.000 0.00 0.00 0.00 4.61
1960 3944 0.037734 GAGTTTACAGGGTGGGGTGG 59.962 60.000 0.00 0.00 0.00 4.61
1961 3945 1.076014 GTTTACAGGGTGGGGTGGG 59.924 63.158 0.00 0.00 0.00 4.61
1962 3946 1.387636 TTTACAGGGTGGGGTGGGT 60.388 57.895 0.00 0.00 0.00 4.51
1963 3947 0.104037 TTTACAGGGTGGGGTGGGTA 60.104 55.000 0.00 0.00 0.00 3.69
1964 3948 0.841594 TTACAGGGTGGGGTGGGTAC 60.842 60.000 0.00 0.00 0.00 3.34
1965 3949 1.753259 TACAGGGTGGGGTGGGTACT 61.753 60.000 0.00 0.00 0.00 2.73
1966 3950 1.850755 CAGGGTGGGGTGGGTACTT 60.851 63.158 0.00 0.00 0.00 2.24
1967 3951 1.850755 AGGGTGGGGTGGGTACTTG 60.851 63.158 0.00 0.00 0.00 3.16
1968 3952 2.761160 GGTGGGGTGGGTACTTGG 59.239 66.667 0.00 0.00 0.00 3.61
1969 3953 2.761160 GTGGGGTGGGTACTTGGG 59.239 66.667 0.00 0.00 0.00 4.12
1970 3954 3.261677 TGGGGTGGGTACTTGGGC 61.262 66.667 0.00 0.00 0.00 5.36
1971 3955 2.939353 GGGGTGGGTACTTGGGCT 60.939 66.667 0.00 0.00 0.00 5.19
1972 3956 2.544745 GGGGTGGGTACTTGGGCTT 61.545 63.158 0.00 0.00 0.00 4.35
1973 3957 1.463375 GGGTGGGTACTTGGGCTTT 59.537 57.895 0.00 0.00 0.00 3.51
1974 3958 0.178944 GGGTGGGTACTTGGGCTTTT 60.179 55.000 0.00 0.00 0.00 2.27
1975 3959 1.712056 GGTGGGTACTTGGGCTTTTT 58.288 50.000 0.00 0.00 0.00 1.94
1976 3960 2.491271 GGGTGGGTACTTGGGCTTTTTA 60.491 50.000 0.00 0.00 0.00 1.52
1977 3961 2.823747 GGTGGGTACTTGGGCTTTTTAG 59.176 50.000 0.00 0.00 0.00 1.85
1978 3962 3.493334 GTGGGTACTTGGGCTTTTTAGT 58.507 45.455 0.00 0.00 0.00 2.24
1979 3963 3.254903 GTGGGTACTTGGGCTTTTTAGTG 59.745 47.826 0.00 0.00 0.00 2.74
1980 3964 2.230508 GGGTACTTGGGCTTTTTAGTGC 59.769 50.000 0.00 0.00 0.00 4.40
1981 3965 2.888414 GGTACTTGGGCTTTTTAGTGCA 59.112 45.455 0.00 0.00 0.00 4.57
1982 3966 3.305131 GGTACTTGGGCTTTTTAGTGCAC 60.305 47.826 9.40 9.40 0.00 4.57
2065 4415 7.971722 TCAATGCTGTCATGTGAATTTTGATAG 59.028 33.333 0.00 0.00 32.23 2.08
2095 4445 6.647334 TTTCTAAACAGCATGGACATTTGA 57.353 33.333 0.00 0.00 43.62 2.69
2138 4488 7.591006 ATGCAAAGTTAATTTCTTGCATGAG 57.409 32.000 17.25 0.00 37.76 2.90
2725 5079 3.259064 TCTGGTTGCTAAACTATCGTGC 58.741 45.455 0.00 0.00 36.48 5.34
2876 5232 9.103861 CTTTCATACCAAGATAGAAAGAACCTC 57.896 37.037 7.27 0.00 44.78 3.85
2975 5388 6.072783 CCTTCCTCTTTCTTGTTCTTAGCAAG 60.073 42.308 0.00 0.00 43.26 4.01
3129 5543 7.576287 GATGTCCATATGGAAATCGATGCATTT 60.576 37.037 30.73 7.92 45.96 2.32
3292 5706 5.122711 GCATGCAAAGGTAATTTTGATGCTT 59.877 36.000 14.21 0.00 41.63 3.91
3626 6040 4.338118 TCTCATGGAGGAAACAACACAAAC 59.662 41.667 0.00 0.00 0.00 2.93
3804 6218 0.470766 TAAGCAACAACGGTGAGGGT 59.529 50.000 7.88 0.27 0.00 4.34
4262 6703 0.323999 AGGCTTGCATGGCTTGATGA 60.324 50.000 21.22 0.00 40.00 2.92
4520 6965 8.653036 ACTGTCTGATATACCTTTATACTCCC 57.347 38.462 0.00 0.00 0.00 4.30
4521 6966 8.457757 ACTGTCTGATATACCTTTATACTCCCT 58.542 37.037 0.00 0.00 0.00 4.20
4522 6967 8.880991 TGTCTGATATACCTTTATACTCCCTC 57.119 38.462 0.00 0.00 0.00 4.30
4523 6968 7.894364 TGTCTGATATACCTTTATACTCCCTCC 59.106 40.741 0.00 0.00 0.00 4.30
4524 6969 7.067251 GTCTGATATACCTTTATACTCCCTCCG 59.933 44.444 0.00 0.00 0.00 4.63
4525 6970 6.797707 TGATATACCTTTATACTCCCTCCGT 58.202 40.000 0.00 0.00 0.00 4.69
4526 6971 6.888632 TGATATACCTTTATACTCCCTCCGTC 59.111 42.308 0.00 0.00 0.00 4.79
4527 6972 2.675583 ACCTTTATACTCCCTCCGTCC 58.324 52.381 0.00 0.00 0.00 4.79
4528 6973 1.612463 CCTTTATACTCCCTCCGTCCG 59.388 57.143 0.00 0.00 0.00 4.79
4529 6974 2.579873 CTTTATACTCCCTCCGTCCGA 58.420 52.381 0.00 0.00 0.00 4.55
4530 6975 2.734755 TTATACTCCCTCCGTCCGAA 57.265 50.000 0.00 0.00 0.00 4.30
4531 6976 2.734755 TATACTCCCTCCGTCCGAAA 57.265 50.000 0.00 0.00 0.00 3.46
4532 6977 1.856629 ATACTCCCTCCGTCCGAAAA 58.143 50.000 0.00 0.00 0.00 2.29
4533 6978 1.856629 TACTCCCTCCGTCCGAAAAT 58.143 50.000 0.00 0.00 0.00 1.82
4534 6979 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
4535 6980 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
4536 6981 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
4537 6982 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
4538 6983 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
4539 6984 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
4540 6985 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
4541 6986 2.928116 CTCCGTCCGAAAATACTTGTCC 59.072 50.000 0.00 0.00 0.00 4.02
4542 6987 2.564062 TCCGTCCGAAAATACTTGTCCT 59.436 45.455 0.00 0.00 0.00 3.85
4543 6988 3.763360 TCCGTCCGAAAATACTTGTCCTA 59.237 43.478 0.00 0.00 0.00 2.94
4544 6989 4.110482 CCGTCCGAAAATACTTGTCCTAG 58.890 47.826 0.00 0.00 0.00 3.02
4545 6990 4.381292 CCGTCCGAAAATACTTGTCCTAGT 60.381 45.833 0.00 0.00 0.00 2.57
4546 6991 5.163622 CCGTCCGAAAATACTTGTCCTAGTA 60.164 44.000 0.00 0.00 35.25 1.82
4547 6992 6.324819 CGTCCGAAAATACTTGTCCTAGTAA 58.675 40.000 0.00 0.00 34.50 2.24
4548 6993 6.976925 CGTCCGAAAATACTTGTCCTAGTAAT 59.023 38.462 0.00 0.00 34.50 1.89
4549 6994 7.043590 CGTCCGAAAATACTTGTCCTAGTAATG 60.044 40.741 0.00 0.00 34.50 1.90
4550 6995 7.224167 GTCCGAAAATACTTGTCCTAGTAATGG 59.776 40.741 0.00 0.00 34.50 3.16
4551 6996 7.124599 TCCGAAAATACTTGTCCTAGTAATGGA 59.875 37.037 0.00 0.00 34.50 3.41
4552 6997 7.931948 CCGAAAATACTTGTCCTAGTAATGGAT 59.068 37.037 0.00 0.00 34.50 3.41
4553 6998 8.765219 CGAAAATACTTGTCCTAGTAATGGATG 58.235 37.037 0.00 0.00 34.50 3.51
4554 6999 9.614792 GAAAATACTTGTCCTAGTAATGGATGT 57.385 33.333 0.00 0.00 34.50 3.06
4558 7003 7.676683 ACTTGTCCTAGTAATGGATGTATGT 57.323 36.000 0.00 0.00 35.87 2.29
4559 7004 8.777578 ACTTGTCCTAGTAATGGATGTATGTA 57.222 34.615 0.00 0.00 35.87 2.29
4560 7005 8.861086 ACTTGTCCTAGTAATGGATGTATGTAG 58.139 37.037 0.00 0.00 35.87 2.74
4561 7006 9.078990 CTTGTCCTAGTAATGGATGTATGTAGA 57.921 37.037 0.00 0.00 35.87 2.59
4562 7007 8.405418 TGTCCTAGTAATGGATGTATGTAGAC 57.595 38.462 0.00 0.00 35.87 2.59
4563 7008 8.225416 TGTCCTAGTAATGGATGTATGTAGACT 58.775 37.037 0.00 0.00 35.87 3.24
4564 7009 9.080097 GTCCTAGTAATGGATGTATGTAGACTT 57.920 37.037 0.00 0.00 35.87 3.01
4606 7051 9.699410 ACATCCATTTTATCCATTTCTTAGACA 57.301 29.630 0.00 0.00 0.00 3.41
4609 7054 9.753674 TCCATTTTATCCATTTCTTAGACAAGT 57.246 29.630 0.00 0.00 33.20 3.16
4616 7061 7.843490 TCCATTTCTTAGACAAGTATTTCCG 57.157 36.000 0.00 0.00 33.20 4.30
4617 7062 6.821665 TCCATTTCTTAGACAAGTATTTCCGG 59.178 38.462 0.00 0.00 33.20 5.14
4618 7063 6.821665 CCATTTCTTAGACAAGTATTTCCGGA 59.178 38.462 0.00 0.00 33.20 5.14
4619 7064 7.201617 CCATTTCTTAGACAAGTATTTCCGGAC 60.202 40.741 1.83 0.00 33.20 4.79
4620 7065 4.990257 TCTTAGACAAGTATTTCCGGACG 58.010 43.478 1.83 0.00 33.20 4.79
4621 7066 2.667473 AGACAAGTATTTCCGGACGG 57.333 50.000 1.83 3.96 0.00 4.79
4622 7067 2.173519 AGACAAGTATTTCCGGACGGA 58.826 47.619 1.83 9.76 43.52 4.69
4623 7068 2.165845 AGACAAGTATTTCCGGACGGAG 59.834 50.000 13.64 3.15 46.06 4.63
4624 7069 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
4625 7070 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
4626 7071 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
4627 7072 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
4730 7175 4.990426 GGGTATAACGCGGTATTAACATGT 59.010 41.667 23.59 0.00 0.00 3.21
4787 7232 1.134175 CTGGTGGTGCAGAACGTTTTT 59.866 47.619 0.46 0.00 0.00 1.94
4807 7252 6.609379 TTTTGGGGGCTTTAGGGTATTATA 57.391 37.500 0.00 0.00 0.00 0.98
4808 7253 6.806959 TTTGGGGGCTTTAGGGTATTATAT 57.193 37.500 0.00 0.00 0.00 0.86
4809 7254 6.806959 TTGGGGGCTTTAGGGTATTATATT 57.193 37.500 0.00 0.00 0.00 1.28
5017 7462 9.104965 TGCTTATATTATTTGCTAAAGTGACGT 57.895 29.630 0.00 0.00 0.00 4.34
5100 7553 2.124903 GAGAAAACTCGTGAACGCTCA 58.875 47.619 0.00 0.00 39.60 4.26
5139 7592 2.965831 TCGTGATCCAAGGGAAGATAGG 59.034 50.000 0.00 0.00 34.34 2.57
5350 7803 0.680061 AAGTCACGAACAGGACCCTC 59.320 55.000 0.00 0.00 34.58 4.30
5888 8341 9.807649 ATGTTCTATGTAATTTTGAAGCCAATC 57.192 29.630 0.00 0.00 31.46 2.67
5901 8354 1.826720 AGCCAATCGCCAATCAATGTT 59.173 42.857 0.00 0.00 38.78 2.71
5913 8366 6.523201 CGCCAATCAATGTTAACTTGTTACTC 59.477 38.462 7.22 1.57 0.00 2.59
5915 8368 7.581476 CCAATCAATGTTAACTTGTTACTCGT 58.419 34.615 7.22 0.00 0.00 4.18
5960 8413 5.517054 GCATTTTTGTTGGTTTCGACAGTTA 59.483 36.000 0.00 0.00 38.42 2.24
5975 8428 4.245660 GACAGTTACTGTAGATGCAAGCA 58.754 43.478 18.63 0.00 45.44 3.91
6086 8539 8.357290 TGATTTTGTTGATCATCTGAGGAATT 57.643 30.769 0.00 0.00 0.00 2.17
6275 8728 7.827236 TGTAACTCCTTTTGAATCGGATATTGT 59.173 33.333 0.00 0.00 0.00 2.71
6334 8900 1.956477 GCTGAACTTCAAGCCTTTGGA 59.044 47.619 0.00 0.00 34.97 3.53
6380 8946 2.360801 GGTGGCACTAAGAGCACAAAAA 59.639 45.455 18.45 0.00 0.00 1.94
6406 8972 3.306710 GGTTGGAGTAAATTTTGGGGCAG 60.307 47.826 0.00 0.00 0.00 4.85
6499 9308 5.105752 GTGCTGTTTTGACACAAATAACCA 58.894 37.500 0.00 0.00 34.43 3.67
6506 9315 9.442047 TGTTTTGACACAAATAACCATTTTCTT 57.558 25.926 0.00 0.00 31.82 2.52
6542 9351 0.594796 CTCCGCAACAACCAAAGTGC 60.595 55.000 0.00 0.00 0.00 4.40
6560 9369 7.645340 CCAAAGTGCTGTATATTTGTAGCATTC 59.355 37.037 0.00 0.00 46.48 2.67
6570 9379 2.679355 TGTAGCATTCGTTGTTGCAC 57.321 45.000 0.00 0.00 41.35 4.57
6713 9525 1.560505 ATGGTTGAAAGGGATGGCAC 58.439 50.000 0.00 0.00 0.00 5.01
6771 9583 6.840090 TGATGGATTTATGGGTTTCTCCTA 57.160 37.500 0.00 0.00 36.25 2.94
6772 9584 7.219601 TGATGGATTTATGGGTTTCTCCTAA 57.780 36.000 0.00 0.00 36.25 2.69
6773 9585 7.647827 TGATGGATTTATGGGTTTCTCCTAAA 58.352 34.615 0.00 0.00 36.25 1.85
6774 9586 7.779798 TGATGGATTTATGGGTTTCTCCTAAAG 59.220 37.037 0.00 0.00 36.25 1.85
6775 9587 6.431722 TGGATTTATGGGTTTCTCCTAAAGG 58.568 40.000 0.00 0.00 36.25 3.11
6776 9588 5.302059 GGATTTATGGGTTTCTCCTAAAGGC 59.698 44.000 0.00 0.00 36.25 4.35
6777 9589 4.938575 TTATGGGTTTCTCCTAAAGGCA 57.061 40.909 0.00 0.00 36.25 4.75
6778 9590 5.466127 TTATGGGTTTCTCCTAAAGGCAT 57.534 39.130 0.00 0.00 36.25 4.40
6779 9591 3.366052 TGGGTTTCTCCTAAAGGCATC 57.634 47.619 0.00 0.00 36.25 3.91
6780 9592 2.919602 TGGGTTTCTCCTAAAGGCATCT 59.080 45.455 0.00 0.00 36.25 2.90
6781 9593 3.333680 TGGGTTTCTCCTAAAGGCATCTT 59.666 43.478 0.00 0.00 36.25 2.40
6782 9594 3.948473 GGGTTTCTCCTAAAGGCATCTTC 59.052 47.826 0.00 0.00 36.25 2.87
6783 9595 4.567747 GGGTTTCTCCTAAAGGCATCTTCA 60.568 45.833 0.00 0.00 36.25 3.02
6784 9596 5.010282 GGTTTCTCCTAAAGGCATCTTCAA 58.990 41.667 0.00 0.00 34.44 2.69
6785 9597 5.654209 GGTTTCTCCTAAAGGCATCTTCAAT 59.346 40.000 0.00 0.00 34.44 2.57
6786 9598 6.828785 GGTTTCTCCTAAAGGCATCTTCAATA 59.171 38.462 0.00 0.00 34.44 1.90
6787 9599 7.012799 GGTTTCTCCTAAAGGCATCTTCAATAG 59.987 40.741 0.00 0.00 34.44 1.73
6788 9600 6.814954 TCTCCTAAAGGCATCTTCAATAGT 57.185 37.500 0.00 0.00 34.44 2.12
6789 9601 7.200434 TCTCCTAAAGGCATCTTCAATAGTT 57.800 36.000 0.00 0.00 34.44 2.24
6790 9602 7.633789 TCTCCTAAAGGCATCTTCAATAGTTT 58.366 34.615 0.00 0.00 34.44 2.66
6791 9603 7.554118 TCTCCTAAAGGCATCTTCAATAGTTTG 59.446 37.037 0.00 0.00 34.44 2.93
6792 9604 7.175104 TCCTAAAGGCATCTTCAATAGTTTGT 58.825 34.615 0.00 0.00 32.98 2.83
6793 9605 8.325787 TCCTAAAGGCATCTTCAATAGTTTGTA 58.674 33.333 0.00 0.00 32.98 2.41
6794 9606 9.125026 CCTAAAGGCATCTTCAATAGTTTGTAT 57.875 33.333 0.00 0.00 34.32 2.29
6795 9607 9.941664 CTAAAGGCATCTTCAATAGTTTGTATG 57.058 33.333 0.00 0.00 34.32 2.39
6796 9608 7.944729 AAGGCATCTTCAATAGTTTGTATGT 57.055 32.000 0.00 0.00 34.32 2.29
6797 9609 7.944729 AGGCATCTTCAATAGTTTGTATGTT 57.055 32.000 0.00 0.00 34.32 2.71
6798 9610 9.461312 AAGGCATCTTCAATAGTTTGTATGTTA 57.539 29.630 0.00 0.00 34.32 2.41
6799 9611 9.113838 AGGCATCTTCAATAGTTTGTATGTTAG 57.886 33.333 0.00 0.00 34.32 2.34
6800 9612 7.857885 GGCATCTTCAATAGTTTGTATGTTAGC 59.142 37.037 0.00 0.00 34.32 3.09
6801 9613 8.616076 GCATCTTCAATAGTTTGTATGTTAGCT 58.384 33.333 0.00 0.00 34.32 3.32
6804 9616 9.502091 TCTTCAATAGTTTGTATGTTAGCTTGT 57.498 29.630 0.00 0.00 34.32 3.16
6806 9618 9.891828 TTCAATAGTTTGTATGTTAGCTTGTTG 57.108 29.630 0.00 0.00 34.32 3.33
6807 9619 8.511321 TCAATAGTTTGTATGTTAGCTTGTTGG 58.489 33.333 0.00 0.00 34.32 3.77
6808 9620 7.996098 ATAGTTTGTATGTTAGCTTGTTGGT 57.004 32.000 0.00 0.00 0.00 3.67
6809 9621 9.509956 AATAGTTTGTATGTTAGCTTGTTGGTA 57.490 29.630 0.00 0.00 0.00 3.25
6810 9622 7.811117 AGTTTGTATGTTAGCTTGTTGGTAA 57.189 32.000 0.00 0.00 36.42 2.85
6811 9623 8.228035 AGTTTGTATGTTAGCTTGTTGGTAAA 57.772 30.769 0.00 0.00 39.88 2.01
6812 9624 8.688151 AGTTTGTATGTTAGCTTGTTGGTAAAA 58.312 29.630 0.00 0.00 39.88 1.52
6813 9625 9.471084 GTTTGTATGTTAGCTTGTTGGTAAAAT 57.529 29.630 0.00 0.00 39.88 1.82
6817 9629 9.233232 GTATGTTAGCTTGTTGGTAAAATATGC 57.767 33.333 0.00 0.00 39.54 3.14
6818 9630 6.626302 TGTTAGCTTGTTGGTAAAATATGCC 58.374 36.000 0.00 0.00 39.88 4.40
6819 9631 6.209589 TGTTAGCTTGTTGGTAAAATATGCCA 59.790 34.615 0.00 0.00 42.69 4.92
6820 9632 5.937975 AGCTTGTTGGTAAAATATGCCAT 57.062 34.783 0.00 0.00 43.93 4.40
6821 9633 5.663456 AGCTTGTTGGTAAAATATGCCATG 58.337 37.500 0.00 0.00 43.93 3.66
6822 9634 5.187576 AGCTTGTTGGTAAAATATGCCATGT 59.812 36.000 0.00 0.00 43.93 3.21
6823 9635 5.519927 GCTTGTTGGTAAAATATGCCATGTC 59.480 40.000 0.00 0.00 43.93 3.06
6824 9636 6.596309 TTGTTGGTAAAATATGCCATGTCA 57.404 33.333 0.00 0.00 43.93 3.58
6825 9637 6.788598 TGTTGGTAAAATATGCCATGTCAT 57.211 33.333 0.00 0.00 43.93 3.06
6826 9638 6.804677 TGTTGGTAAAATATGCCATGTCATC 58.195 36.000 0.00 0.00 43.93 2.92
6827 9639 6.379417 TGTTGGTAAAATATGCCATGTCATCA 59.621 34.615 0.00 0.00 43.93 3.07
6828 9640 7.093596 TGTTGGTAAAATATGCCATGTCATCAA 60.094 33.333 0.00 0.00 43.93 2.57
6829 9641 6.804677 TGGTAAAATATGCCATGTCATCAAC 58.195 36.000 0.00 0.00 39.10 3.18
6830 9642 6.183360 TGGTAAAATATGCCATGTCATCAACC 60.183 38.462 0.00 0.00 39.10 3.77
6831 9643 5.936187 AAAATATGCCATGTCATCAACCA 57.064 34.783 0.00 0.00 0.00 3.67
6832 9644 5.936187 AAATATGCCATGTCATCAACCAA 57.064 34.783 0.00 0.00 0.00 3.67
6833 9645 4.924305 ATATGCCATGTCATCAACCAAC 57.076 40.909 0.00 0.00 0.00 3.77
6834 9646 1.992538 TGCCATGTCATCAACCAACA 58.007 45.000 0.00 0.00 0.00 3.33
6835 9647 1.612950 TGCCATGTCATCAACCAACAC 59.387 47.619 0.00 0.00 0.00 3.32
6836 9648 1.067635 GCCATGTCATCAACCAACACC 60.068 52.381 0.00 0.00 0.00 4.16
6837 9649 2.517959 CCATGTCATCAACCAACACCT 58.482 47.619 0.00 0.00 0.00 4.00
6838 9650 2.892852 CCATGTCATCAACCAACACCTT 59.107 45.455 0.00 0.00 0.00 3.50
6839 9651 4.078537 CCATGTCATCAACCAACACCTTA 58.921 43.478 0.00 0.00 0.00 2.69
6840 9652 4.522405 CCATGTCATCAACCAACACCTTAA 59.478 41.667 0.00 0.00 0.00 1.85
6841 9653 5.460646 CATGTCATCAACCAACACCTTAAC 58.539 41.667 0.00 0.00 0.00 2.01
6842 9654 4.527944 TGTCATCAACCAACACCTTAACA 58.472 39.130 0.00 0.00 0.00 2.41
6843 9655 5.136828 TGTCATCAACCAACACCTTAACAT 58.863 37.500 0.00 0.00 0.00 2.71
6844 9656 6.299922 TGTCATCAACCAACACCTTAACATA 58.700 36.000 0.00 0.00 0.00 2.29
6845 9657 6.205853 TGTCATCAACCAACACCTTAACATAC 59.794 38.462 0.00 0.00 0.00 2.39
6846 9658 6.205853 GTCATCAACCAACACCTTAACATACA 59.794 38.462 0.00 0.00 0.00 2.29
6847 9659 6.773200 TCATCAACCAACACCTTAACATACAA 59.227 34.615 0.00 0.00 0.00 2.41
6848 9660 6.380095 TCAACCAACACCTTAACATACAAC 57.620 37.500 0.00 0.00 0.00 3.32
6849 9661 5.886474 TCAACCAACACCTTAACATACAACA 59.114 36.000 0.00 0.00 0.00 3.33
6850 9662 6.377429 TCAACCAACACCTTAACATACAACAA 59.623 34.615 0.00 0.00 0.00 2.83
6851 9663 6.139048 ACCAACACCTTAACATACAACAAC 57.861 37.500 0.00 0.00 0.00 3.32
6852 9664 5.889289 ACCAACACCTTAACATACAACAACT 59.111 36.000 0.00 0.00 0.00 3.16
6853 9665 6.378848 ACCAACACCTTAACATACAACAACTT 59.621 34.615 0.00 0.00 0.00 2.66
6854 9666 6.915843 CCAACACCTTAACATACAACAACTTC 59.084 38.462 0.00 0.00 0.00 3.01
6855 9667 7.415765 CCAACACCTTAACATACAACAACTTCA 60.416 37.037 0.00 0.00 0.00 3.02
6856 9668 7.633193 ACACCTTAACATACAACAACTTCAA 57.367 32.000 0.00 0.00 0.00 2.69
6857 9669 8.232913 ACACCTTAACATACAACAACTTCAAT 57.767 30.769 0.00 0.00 0.00 2.57
6858 9670 8.134895 ACACCTTAACATACAACAACTTCAATG 58.865 33.333 0.00 0.00 0.00 2.82
6859 9671 7.594758 CACCTTAACATACAACAACTTCAATGG 59.405 37.037 0.00 0.00 0.00 3.16
6860 9672 7.504238 ACCTTAACATACAACAACTTCAATGGA 59.496 33.333 0.00 0.00 0.00 3.41
6861 9673 8.522830 CCTTAACATACAACAACTTCAATGGAT 58.477 33.333 0.00 0.00 0.00 3.41
6862 9674 9.912634 CTTAACATACAACAACTTCAATGGATT 57.087 29.630 0.00 0.00 0.00 3.01
6876 9688 9.289782 ACTTCAATGGATTATATCTAGTTTGCC 57.710 33.333 0.00 0.00 0.00 4.52
6877 9689 8.635765 TTCAATGGATTATATCTAGTTTGCCC 57.364 34.615 0.00 0.00 0.00 5.36
6878 9690 7.754624 TCAATGGATTATATCTAGTTTGCCCA 58.245 34.615 0.00 0.00 0.00 5.36
6879 9691 8.224025 TCAATGGATTATATCTAGTTTGCCCAA 58.776 33.333 0.00 0.00 0.00 4.12
6880 9692 9.028284 CAATGGATTATATCTAGTTTGCCCAAT 57.972 33.333 0.00 0.00 0.00 3.16
6882 9694 9.911788 ATGGATTATATCTAGTTTGCCCAATAG 57.088 33.333 0.00 0.00 0.00 1.73
6883 9695 8.328758 TGGATTATATCTAGTTTGCCCAATAGG 58.671 37.037 0.00 0.00 39.47 2.57
6884 9696 8.548877 GGATTATATCTAGTTTGCCCAATAGGA 58.451 37.037 0.00 0.00 38.24 2.94
6886 9698 9.911788 ATTATATCTAGTTTGCCCAATAGGATG 57.088 33.333 0.00 0.00 38.24 3.51
6887 9699 5.653255 ATCTAGTTTGCCCAATAGGATGT 57.347 39.130 0.00 0.00 38.24 3.06
6888 9700 4.780815 TCTAGTTTGCCCAATAGGATGTG 58.219 43.478 0.00 0.00 38.24 3.21
6889 9701 3.737559 AGTTTGCCCAATAGGATGTGA 57.262 42.857 0.00 0.00 38.24 3.58
6890 9702 3.624777 AGTTTGCCCAATAGGATGTGAG 58.375 45.455 0.00 0.00 38.24 3.51
6891 9703 3.266772 AGTTTGCCCAATAGGATGTGAGA 59.733 43.478 0.00 0.00 38.24 3.27
6892 9704 4.079558 AGTTTGCCCAATAGGATGTGAGAT 60.080 41.667 0.00 0.00 38.24 2.75
6893 9705 5.132648 AGTTTGCCCAATAGGATGTGAGATA 59.867 40.000 0.00 0.00 38.24 1.98
6894 9706 5.645056 TTGCCCAATAGGATGTGAGATAA 57.355 39.130 0.00 0.00 38.24 1.75
6895 9707 5.848286 TGCCCAATAGGATGTGAGATAAT 57.152 39.130 0.00 0.00 38.24 1.28
6896 9708 6.950860 TGCCCAATAGGATGTGAGATAATA 57.049 37.500 0.00 0.00 38.24 0.98
6897 9709 7.328404 TGCCCAATAGGATGTGAGATAATAA 57.672 36.000 0.00 0.00 38.24 1.40
6898 9710 7.754624 TGCCCAATAGGATGTGAGATAATAAA 58.245 34.615 0.00 0.00 38.24 1.40
6899 9711 8.393259 TGCCCAATAGGATGTGAGATAATAAAT 58.607 33.333 0.00 0.00 38.24 1.40
6900 9712 8.680903 GCCCAATAGGATGTGAGATAATAAATG 58.319 37.037 0.00 0.00 38.24 2.32
6901 9713 9.964354 CCCAATAGGATGTGAGATAATAAATGA 57.036 33.333 0.00 0.00 38.24 2.57
6906 9718 8.038862 AGGATGTGAGATAATAAATGAGGTGT 57.961 34.615 0.00 0.00 0.00 4.16
6907 9719 8.497745 AGGATGTGAGATAATAAATGAGGTGTT 58.502 33.333 0.00 0.00 0.00 3.32
6908 9720 8.778358 GGATGTGAGATAATAAATGAGGTGTTC 58.222 37.037 0.00 0.00 0.00 3.18
6909 9721 9.553064 GATGTGAGATAATAAATGAGGTGTTCT 57.447 33.333 0.00 0.00 0.00 3.01
6910 9722 8.948631 TGTGAGATAATAAATGAGGTGTTCTC 57.051 34.615 0.00 0.00 42.74 2.87
6911 9723 8.762645 TGTGAGATAATAAATGAGGTGTTCTCT 58.237 33.333 0.00 0.00 42.86 3.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 5.577164 CGGTACTTTTGGAGTATCAGAACAG 59.423 44.000 0.00 0.00 41.25 3.16
180 1770 3.044114 GCGTCAACGAGTTCGAGCG 62.044 63.158 8.72 7.72 43.02 5.03
308 1898 3.023119 TCAATGTTGTTGCCTGTTGTCT 58.977 40.909 0.00 0.00 0.00 3.41
313 1903 0.675633 GCCTCAATGTTGTTGCCTGT 59.324 50.000 0.00 0.00 0.00 4.00
323 1913 0.541392 TCATAGGCACGCCTCAATGT 59.459 50.000 15.29 0.00 44.43 2.71
702 2667 1.145119 GGAGGAAAACAGGGGTCAACT 59.855 52.381 0.00 0.00 0.00 3.16
705 2670 0.699577 TGGGAGGAAAACAGGGGTCA 60.700 55.000 0.00 0.00 0.00 4.02
730 2695 3.261897 ACATCTCCAACCTGTAGAAGTGG 59.738 47.826 0.00 0.00 0.00 4.00
1195 3177 0.939698 GGGTTAGGTCTAGAGGGGGA 59.060 60.000 0.00 0.00 0.00 4.81
1486 3468 3.266541 TCAAGCACAAACATAGTTGCG 57.733 42.857 0.00 0.00 31.29 4.85
1551 3533 2.930040 CCTCGATACAAACTGCGACATT 59.070 45.455 0.00 0.00 0.00 2.71
1570 3552 2.925170 ACCAGGCTCTGCGAACCT 60.925 61.111 0.00 0.00 0.00 3.50
1617 3599 4.755266 AAAACATACCCTAGTCTCGCAT 57.245 40.909 0.00 0.00 0.00 4.73
1642 3624 0.248580 CGCAAACTGCAGCAACAAGA 60.249 50.000 15.27 0.00 45.36 3.02
1713 3696 3.345508 AATTTGGAACGGAGGGAGTAC 57.654 47.619 0.00 0.00 0.00 2.73
1714 3697 4.098894 AGTAATTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
1715 3698 2.910977 AGTAATTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
1716 3699 3.532542 GAGTAATTTGGAACGGAGGGAG 58.467 50.000 0.00 0.00 0.00 4.30
1717 3700 2.093869 CGAGTAATTTGGAACGGAGGGA 60.094 50.000 0.00 0.00 0.00 4.20
1718 3701 2.277084 CGAGTAATTTGGAACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
1719 3702 2.968675 ACGAGTAATTTGGAACGGAGG 58.031 47.619 0.00 0.00 0.00 4.30
1720 3703 3.424433 GCAACGAGTAATTTGGAACGGAG 60.424 47.826 0.00 0.00 0.00 4.63
1721 3704 2.481185 GCAACGAGTAATTTGGAACGGA 59.519 45.455 0.00 0.00 0.00 4.69
1722 3705 2.224549 TGCAACGAGTAATTTGGAACGG 59.775 45.455 0.00 0.00 0.00 4.44
1723 3706 3.185594 TCTGCAACGAGTAATTTGGAACG 59.814 43.478 0.00 0.00 0.00 3.95
1724 3707 4.742438 TCTGCAACGAGTAATTTGGAAC 57.258 40.909 0.00 0.00 0.00 3.62
1725 3708 5.759506 TTTCTGCAACGAGTAATTTGGAA 57.240 34.783 0.00 0.00 0.00 3.53
1726 3709 5.335583 CCATTTCTGCAACGAGTAATTTGGA 60.336 40.000 0.00 0.00 0.00 3.53
1727 3710 4.858692 CCATTTCTGCAACGAGTAATTTGG 59.141 41.667 0.00 0.00 0.00 3.28
1728 3711 5.698832 TCCATTTCTGCAACGAGTAATTTG 58.301 37.500 0.00 0.00 0.00 2.32
1729 3712 5.957842 TCCATTTCTGCAACGAGTAATTT 57.042 34.783 0.00 0.00 0.00 1.82
1730 3713 5.415701 ACATCCATTTCTGCAACGAGTAATT 59.584 36.000 0.00 0.00 0.00 1.40
1731 3714 4.943705 ACATCCATTTCTGCAACGAGTAAT 59.056 37.500 0.00 0.00 0.00 1.89
1732 3715 4.323417 ACATCCATTTCTGCAACGAGTAA 58.677 39.130 0.00 0.00 0.00 2.24
1733 3716 3.937814 ACATCCATTTCTGCAACGAGTA 58.062 40.909 0.00 0.00 0.00 2.59
1734 3717 2.783135 ACATCCATTTCTGCAACGAGT 58.217 42.857 0.00 0.00 0.00 4.18
1735 3718 4.813161 AGATACATCCATTTCTGCAACGAG 59.187 41.667 0.00 0.00 0.00 4.18
1736 3719 4.769688 AGATACATCCATTTCTGCAACGA 58.230 39.130 0.00 0.00 0.00 3.85
1737 3720 5.985530 TCTAGATACATCCATTTCTGCAACG 59.014 40.000 0.00 0.00 0.00 4.10
1738 3721 7.497249 AGTTCTAGATACATCCATTTCTGCAAC 59.503 37.037 0.00 0.00 0.00 4.17
1739 3722 7.568349 AGTTCTAGATACATCCATTTCTGCAA 58.432 34.615 0.00 0.00 0.00 4.08
1740 3723 7.129457 AGTTCTAGATACATCCATTTCTGCA 57.871 36.000 0.00 0.00 0.00 4.41
1741 3724 9.547753 TTTAGTTCTAGATACATCCATTTCTGC 57.452 33.333 0.00 0.00 0.00 4.26
1762 3745 9.871238 GGTATGGATGTATCGATGTATTTTAGT 57.129 33.333 8.54 0.00 0.00 2.24
1764 3747 9.869757 CAGGTATGGATGTATCGATGTATTTTA 57.130 33.333 8.54 0.00 0.00 1.52
1765 3748 7.334421 GCAGGTATGGATGTATCGATGTATTTT 59.666 37.037 8.54 0.00 0.00 1.82
1766 3749 6.818644 GCAGGTATGGATGTATCGATGTATTT 59.181 38.462 8.54 0.00 0.00 1.40
1767 3750 6.341316 GCAGGTATGGATGTATCGATGTATT 58.659 40.000 8.54 0.00 0.00 1.89
1768 3751 5.450550 CGCAGGTATGGATGTATCGATGTAT 60.451 44.000 8.54 1.79 0.00 2.29
1769 3752 4.142469 CGCAGGTATGGATGTATCGATGTA 60.142 45.833 8.54 0.00 0.00 2.29
1770 3753 3.367395 CGCAGGTATGGATGTATCGATGT 60.367 47.826 8.54 0.00 0.00 3.06
1771 3754 3.119495 TCGCAGGTATGGATGTATCGATG 60.119 47.826 8.54 0.00 0.00 3.84
1772 3755 3.089284 TCGCAGGTATGGATGTATCGAT 58.911 45.455 2.16 2.16 0.00 3.59
1773 3756 2.228103 GTCGCAGGTATGGATGTATCGA 59.772 50.000 0.00 0.00 0.00 3.59
1774 3757 2.030274 TGTCGCAGGTATGGATGTATCG 60.030 50.000 0.00 0.00 0.00 2.92
1775 3758 3.660501 TGTCGCAGGTATGGATGTATC 57.339 47.619 0.00 0.00 0.00 2.24
1776 3759 3.388024 ACTTGTCGCAGGTATGGATGTAT 59.612 43.478 0.00 0.00 0.00 2.29
1777 3760 2.764010 ACTTGTCGCAGGTATGGATGTA 59.236 45.455 0.00 0.00 0.00 2.29
1778 3761 1.555075 ACTTGTCGCAGGTATGGATGT 59.445 47.619 0.00 0.00 0.00 3.06
1779 3762 2.315925 ACTTGTCGCAGGTATGGATG 57.684 50.000 0.00 0.00 0.00 3.51
1780 3763 4.689612 ATTACTTGTCGCAGGTATGGAT 57.310 40.909 3.46 0.00 0.00 3.41
1781 3764 4.439057 GAATTACTTGTCGCAGGTATGGA 58.561 43.478 3.46 0.00 0.00 3.41
1782 3765 3.245284 CGAATTACTTGTCGCAGGTATGG 59.755 47.826 3.46 0.00 0.00 2.74
1783 3766 3.245284 CCGAATTACTTGTCGCAGGTATG 59.755 47.826 3.46 0.00 35.93 2.39
1784 3767 3.131577 TCCGAATTACTTGTCGCAGGTAT 59.868 43.478 3.46 0.00 35.93 2.73
1785 3768 2.492881 TCCGAATTACTTGTCGCAGGTA 59.507 45.455 0.00 0.00 35.93 3.08
1786 3769 1.274167 TCCGAATTACTTGTCGCAGGT 59.726 47.619 0.00 0.91 35.93 4.00
1787 3770 2.004583 TCCGAATTACTTGTCGCAGG 57.995 50.000 0.00 0.00 35.93 4.85
1788 3771 2.222508 CGTTCCGAATTACTTGTCGCAG 60.223 50.000 0.00 0.00 35.93 5.18
1789 3772 1.722464 CGTTCCGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 35.93 5.10
1790 3773 1.060122 CCGTTCCGAATTACTTGTCGC 59.940 52.381 0.00 0.00 35.93 5.19
1791 3774 2.597305 CTCCGTTCCGAATTACTTGTCG 59.403 50.000 0.00 0.00 37.01 4.35
1792 3775 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
1793 3776 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
1794 3777 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
1795 3778 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
1796 3779 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
1797 3780 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
1798 3781 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
1799 3782 1.755380 CTACTCCCTCCGTTCCGAATT 59.245 52.381 0.00 0.00 0.00 2.17
1800 3783 1.341778 ACTACTCCCTCCGTTCCGAAT 60.342 52.381 0.00 0.00 0.00 3.34
1801 3784 0.038744 ACTACTCCCTCCGTTCCGAA 59.961 55.000 0.00 0.00 0.00 4.30
1802 3785 0.038744 AACTACTCCCTCCGTTCCGA 59.961 55.000 0.00 0.00 0.00 4.55
1803 3786 1.674962 CTAACTACTCCCTCCGTTCCG 59.325 57.143 0.00 0.00 0.00 4.30
1804 3787 2.732763 ACTAACTACTCCCTCCGTTCC 58.267 52.381 0.00 0.00 0.00 3.62
1805 3788 5.591877 TGATTACTAACTACTCCCTCCGTTC 59.408 44.000 0.00 0.00 0.00 3.95
1806 3789 5.513233 TGATTACTAACTACTCCCTCCGTT 58.487 41.667 0.00 0.00 0.00 4.44
1807 3790 5.121380 TGATTACTAACTACTCCCTCCGT 57.879 43.478 0.00 0.00 0.00 4.69
1808 3791 7.941431 ATATGATTACTAACTACTCCCTCCG 57.059 40.000 0.00 0.00 0.00 4.63
1868 3851 1.146263 GGGAAGGATACCAGTGCCG 59.854 63.158 0.00 0.00 37.17 5.69
1949 3933 1.850755 CAAGTACCCACCCCACCCT 60.851 63.158 0.00 0.00 0.00 4.34
1950 3934 2.761160 CAAGTACCCACCCCACCC 59.239 66.667 0.00 0.00 0.00 4.61
1951 3935 2.761160 CCAAGTACCCACCCCACC 59.239 66.667 0.00 0.00 0.00 4.61
1952 3936 2.761160 CCCAAGTACCCACCCCAC 59.239 66.667 0.00 0.00 0.00 4.61
1953 3937 3.261677 GCCCAAGTACCCACCCCA 61.262 66.667 0.00 0.00 0.00 4.96
1954 3938 2.089116 AAAGCCCAAGTACCCACCCC 62.089 60.000 0.00 0.00 0.00 4.95
1955 3939 0.178944 AAAAGCCCAAGTACCCACCC 60.179 55.000 0.00 0.00 0.00 4.61
1956 3940 1.712056 AAAAAGCCCAAGTACCCACC 58.288 50.000 0.00 0.00 0.00 4.61
1957 3941 3.254903 CACTAAAAAGCCCAAGTACCCAC 59.745 47.826 0.00 0.00 0.00 4.61
1958 3942 3.492337 CACTAAAAAGCCCAAGTACCCA 58.508 45.455 0.00 0.00 0.00 4.51
1959 3943 2.230508 GCACTAAAAAGCCCAAGTACCC 59.769 50.000 0.00 0.00 0.00 3.69
1960 3944 2.888414 TGCACTAAAAAGCCCAAGTACC 59.112 45.455 0.00 0.00 0.00 3.34
1961 3945 3.305131 GGTGCACTAAAAAGCCCAAGTAC 60.305 47.826 17.98 0.00 0.00 2.73
1962 3946 2.888414 GGTGCACTAAAAAGCCCAAGTA 59.112 45.455 17.98 0.00 0.00 2.24
1963 3947 1.686587 GGTGCACTAAAAAGCCCAAGT 59.313 47.619 17.98 0.00 0.00 3.16
1964 3948 1.963515 AGGTGCACTAAAAAGCCCAAG 59.036 47.619 17.98 0.00 0.00 3.61
1965 3949 1.686052 CAGGTGCACTAAAAAGCCCAA 59.314 47.619 17.98 0.00 0.00 4.12
1966 3950 1.133637 TCAGGTGCACTAAAAAGCCCA 60.134 47.619 17.98 0.00 0.00 5.36
1967 3951 1.616159 TCAGGTGCACTAAAAAGCCC 58.384 50.000 17.98 0.00 0.00 5.19
1968 3952 3.726291 TTTCAGGTGCACTAAAAAGCC 57.274 42.857 17.98 0.00 0.00 4.35
1969 3953 7.090173 TGATTATTTCAGGTGCACTAAAAAGC 58.910 34.615 17.98 13.30 0.00 3.51
1970 3954 9.474920 TTTGATTATTTCAGGTGCACTAAAAAG 57.525 29.630 17.98 0.84 35.27 2.27
1971 3955 9.995003 ATTTGATTATTTCAGGTGCACTAAAAA 57.005 25.926 17.98 14.01 35.27 1.94
1976 3960 9.995003 TTTTTATTTGATTATTTCAGGTGCACT 57.005 25.926 17.98 0.00 35.27 4.40
1999 4252 8.364894 GGGAGTTCACCACTGTAATTTATTTTT 58.635 33.333 0.00 0.00 35.01 1.94
2020 4370 6.151144 GCATTGACAACTTAATTACTGGGAGT 59.849 38.462 0.00 0.00 0.00 3.85
2065 4415 4.700213 TCCATGCTGTTTAGAAAGCCTTAC 59.300 41.667 0.00 0.00 38.71 2.34
2095 4445 9.542462 CTTTGCATTATTTCATTGGATCAATCT 57.458 29.630 0.00 0.00 31.05 2.40
2231 4581 7.631717 ATCCTTCTTTTCAGCCTATTAACAC 57.368 36.000 0.00 0.00 0.00 3.32
2561 4915 1.953686 GTAGCCCTGCAACAGTTTCAA 59.046 47.619 0.00 0.00 0.00 2.69
2725 5079 3.679502 GCAAATTTTCCCCAGATTTCACG 59.320 43.478 0.00 0.00 0.00 4.35
2902 5315 7.716768 TTTCAACGTTCTTTGGAAAAAGTTT 57.283 28.000 0.00 0.00 32.81 2.66
2975 5388 2.264813 TGTCGGCTCGCATTACTAAAC 58.735 47.619 0.00 0.00 0.00 2.01
3048 5461 4.261741 CCCCAAATTGAAAGATGCCTATCG 60.262 45.833 0.00 0.00 38.38 2.92
3292 5706 6.710295 TCCTCACGATTTTTCTCAAGAAATCA 59.290 34.615 6.05 0.00 42.83 2.57
3626 6040 6.782150 TGAGAGATACCATACGCATTATACG 58.218 40.000 0.00 0.00 0.00 3.06
4111 6548 1.862827 CCTGCAAAGCTCAAAAACAGC 59.137 47.619 0.00 0.00 37.12 4.40
4145 6582 7.064253 CCTCTAGGTTTATTTGTTACCTTGTCG 59.936 40.741 0.00 0.00 42.18 4.35
4262 6703 3.233507 ACAAAGCATGAAATGGGTCAGT 58.766 40.909 0.00 0.00 46.86 3.41
4518 6963 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
4519 6964 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
4520 6965 2.928116 GGACAAGTATTTTCGGACGGAG 59.072 50.000 0.00 0.00 0.00 4.63
4521 6966 2.564062 AGGACAAGTATTTTCGGACGGA 59.436 45.455 0.00 0.00 0.00 4.69
4522 6967 2.968675 AGGACAAGTATTTTCGGACGG 58.031 47.619 0.00 0.00 0.00 4.79
4523 6968 4.741342 ACTAGGACAAGTATTTTCGGACG 58.259 43.478 0.00 0.00 0.00 4.79
4524 6969 7.224167 CCATTACTAGGACAAGTATTTTCGGAC 59.776 40.741 0.00 0.00 32.16 4.79
4525 6970 7.124599 TCCATTACTAGGACAAGTATTTTCGGA 59.875 37.037 0.00 0.00 32.16 4.55
4526 6971 7.270047 TCCATTACTAGGACAAGTATTTTCGG 58.730 38.462 0.00 0.00 32.16 4.30
4527 6972 8.765219 CATCCATTACTAGGACAAGTATTTTCG 58.235 37.037 0.00 0.00 38.13 3.46
4528 6973 9.614792 ACATCCATTACTAGGACAAGTATTTTC 57.385 33.333 0.00 0.00 38.13 2.29
4532 6977 9.381038 ACATACATCCATTACTAGGACAAGTAT 57.619 33.333 0.00 0.00 38.13 2.12
4533 6978 8.777578 ACATACATCCATTACTAGGACAAGTA 57.222 34.615 0.00 0.00 38.13 2.24
4534 6979 7.676683 ACATACATCCATTACTAGGACAAGT 57.323 36.000 0.00 0.00 38.13 3.16
4535 6980 9.078990 TCTACATACATCCATTACTAGGACAAG 57.921 37.037 0.00 0.00 38.13 3.16
4536 6981 8.857098 GTCTACATACATCCATTACTAGGACAA 58.143 37.037 0.00 0.00 38.13 3.18
4537 6982 8.225416 AGTCTACATACATCCATTACTAGGACA 58.775 37.037 0.00 0.00 38.13 4.02
4538 6983 8.638629 AGTCTACATACATCCATTACTAGGAC 57.361 38.462 0.00 0.00 38.13 3.85
4580 7025 9.699410 TGTCTAAGAAATGGATAAAATGGATGT 57.301 29.630 0.00 0.00 0.00 3.06
4583 7028 9.753674 ACTTGTCTAAGAAATGGATAAAATGGA 57.246 29.630 0.00 0.00 37.36 3.41
4590 7035 9.542462 CGGAAATACTTGTCTAAGAAATGGATA 57.458 33.333 0.00 0.00 37.36 2.59
4591 7036 7.499232 CCGGAAATACTTGTCTAAGAAATGGAT 59.501 37.037 0.00 0.00 37.36 3.41
4592 7037 6.821665 CCGGAAATACTTGTCTAAGAAATGGA 59.178 38.462 0.00 0.00 37.36 3.41
4593 7038 6.821665 TCCGGAAATACTTGTCTAAGAAATGG 59.178 38.462 0.00 0.00 37.36 3.16
4594 7039 7.464178 CGTCCGGAAATACTTGTCTAAGAAATG 60.464 40.741 5.23 0.00 37.36 2.32
4595 7040 6.534079 CGTCCGGAAATACTTGTCTAAGAAAT 59.466 38.462 5.23 0.00 37.36 2.17
4596 7041 5.865552 CGTCCGGAAATACTTGTCTAAGAAA 59.134 40.000 5.23 0.00 37.36 2.52
4597 7042 5.404946 CGTCCGGAAATACTTGTCTAAGAA 58.595 41.667 5.23 0.00 37.36 2.52
4598 7043 4.142315 CCGTCCGGAAATACTTGTCTAAGA 60.142 45.833 5.23 0.00 35.93 2.10
4599 7044 4.110482 CCGTCCGGAAATACTTGTCTAAG 58.890 47.826 5.23 0.00 37.42 2.18
4600 7045 3.763360 TCCGTCCGGAAATACTTGTCTAA 59.237 43.478 5.23 0.00 42.05 2.10
4601 7046 3.355378 TCCGTCCGGAAATACTTGTCTA 58.645 45.455 5.23 0.00 42.05 2.59
4602 7047 2.165845 CTCCGTCCGGAAATACTTGTCT 59.834 50.000 5.23 0.00 44.66 3.41
4603 7048 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
4604 7049 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
4605 7050 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
4606 7051 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
4607 7052 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
4608 7053 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
4609 7054 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
4610 7055 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
4611 7056 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
4612 7057 0.754217 CATACTCCCTCCGTCCGGAA 60.754 60.000 5.23 0.00 44.66 4.30
4613 7058 1.152819 CATACTCCCTCCGTCCGGA 60.153 63.158 0.00 0.00 42.90 5.14
4614 7059 0.179009 TACATACTCCCTCCGTCCGG 60.179 60.000 0.00 0.00 0.00 5.14
4615 7060 1.906990 ATACATACTCCCTCCGTCCG 58.093 55.000 0.00 0.00 0.00 4.79
4616 7061 4.320788 CGTTAATACATACTCCCTCCGTCC 60.321 50.000 0.00 0.00 0.00 4.79
4617 7062 4.320788 CCGTTAATACATACTCCCTCCGTC 60.321 50.000 0.00 0.00 0.00 4.79
4618 7063 3.571401 CCGTTAATACATACTCCCTCCGT 59.429 47.826 0.00 0.00 0.00 4.69
4619 7064 3.571401 ACCGTTAATACATACTCCCTCCG 59.429 47.826 0.00 0.00 0.00 4.63
4620 7065 4.831710 AGACCGTTAATACATACTCCCTCC 59.168 45.833 0.00 0.00 0.00 4.30
4621 7066 7.700022 ATAGACCGTTAATACATACTCCCTC 57.300 40.000 0.00 0.00 0.00 4.30
4622 7067 9.765295 ATTATAGACCGTTAATACATACTCCCT 57.235 33.333 0.00 0.00 0.00 4.20
4623 7068 9.798994 CATTATAGACCGTTAATACATACTCCC 57.201 37.037 0.00 0.00 0.00 4.30
4730 7175 7.490657 ACAGAACCAAGGTTACTATCATACA 57.509 36.000 4.14 0.00 38.60 2.29
4787 7232 5.858408 TCAATATAATACCCTAAAGCCCCCA 59.142 40.000 0.00 0.00 0.00 4.96
4807 7252 7.272244 TCATCTAACATACGGACAACATCAAT 58.728 34.615 0.00 0.00 0.00 2.57
4808 7253 6.635755 TCATCTAACATACGGACAACATCAA 58.364 36.000 0.00 0.00 0.00 2.57
4809 7254 6.215495 TCATCTAACATACGGACAACATCA 57.785 37.500 0.00 0.00 0.00 3.07
5008 7453 5.008217 TGCAGCAAAAGTATTACGTCACTTT 59.992 36.000 13.94 13.94 44.72 2.66
5009 7454 4.513692 TGCAGCAAAAGTATTACGTCACTT 59.486 37.500 0.00 0.00 36.56 3.16
5010 7455 4.062293 TGCAGCAAAAGTATTACGTCACT 58.938 39.130 0.00 0.00 0.00 3.41
5011 7456 4.394795 CTGCAGCAAAAGTATTACGTCAC 58.605 43.478 0.00 0.00 0.00 3.67
5012 7457 3.435327 CCTGCAGCAAAAGTATTACGTCA 59.565 43.478 8.66 0.00 0.00 4.35
5013 7458 3.181510 CCCTGCAGCAAAAGTATTACGTC 60.182 47.826 8.66 0.00 0.00 4.34
5014 7459 2.747446 CCCTGCAGCAAAAGTATTACGT 59.253 45.455 8.66 0.00 0.00 3.57
5015 7460 3.006940 TCCCTGCAGCAAAAGTATTACG 58.993 45.455 8.66 0.00 0.00 3.18
5016 7461 4.260784 CGATCCCTGCAGCAAAAGTATTAC 60.261 45.833 8.66 0.00 0.00 1.89
5017 7462 3.876914 CGATCCCTGCAGCAAAAGTATTA 59.123 43.478 8.66 0.00 0.00 0.98
5100 7553 0.537188 GATCACGGGTCCTGTCATGT 59.463 55.000 0.00 0.00 0.00 3.21
5139 7592 1.409064 TCACGATCTCTATGGTGGTGC 59.591 52.381 0.00 0.00 40.94 5.01
5350 7803 0.174845 TTGTAATCTCGGTCCCTGCG 59.825 55.000 0.00 0.00 0.00 5.18
5888 8341 6.378582 AGTAACAAGTTAACATTGATTGGCG 58.621 36.000 18.56 0.00 0.00 5.69
5901 8354 5.097529 CCGCATTAGACGAGTAACAAGTTA 58.902 41.667 0.00 0.00 0.00 2.24
5913 8366 5.432157 CATAAACTTAAGCCGCATTAGACG 58.568 41.667 1.29 0.00 0.00 4.18
5915 8368 4.878971 TGCATAAACTTAAGCCGCATTAGA 59.121 37.500 1.29 0.00 0.00 2.10
5960 8413 4.577693 CCATGTTATGCTTGCATCTACAGT 59.422 41.667 20.13 11.24 0.00 3.55
5975 8428 0.323360 AGCAACCACGCCCATGTTAT 60.323 50.000 0.00 0.00 0.00 1.89
6146 8599 1.583404 CTGCAAAGACGCAACAACAAC 59.417 47.619 0.00 0.00 42.45 3.32
6148 8601 0.808125 ACTGCAAAGACGCAACAACA 59.192 45.000 0.00 0.00 42.45 3.33
6149 8602 1.908065 AACTGCAAAGACGCAACAAC 58.092 45.000 0.00 0.00 42.45 3.32
6150 8603 2.257894 CAAACTGCAAAGACGCAACAA 58.742 42.857 0.00 0.00 42.45 2.83
6195 8648 1.076187 TCTGACTTCTCAGAGGCCTGA 59.924 52.381 12.00 1.01 46.79 3.86
6334 8900 4.026052 CCATCAAAATTCCCTAACTGGCT 58.974 43.478 0.00 0.00 0.00 4.75
6380 8946 4.285775 CCCCAAAATTTACTCCAACCACAT 59.714 41.667 0.00 0.00 0.00 3.21
6477 9277 5.330455 TGGTTATTTGTGTCAAAACAGCA 57.670 34.783 0.00 2.94 35.64 4.41
6499 9308 4.345859 TCACGTAGGACCACAAGAAAAT 57.654 40.909 0.00 0.00 0.00 1.82
6506 9315 1.471119 GAGGATCACGTAGGACCACA 58.529 55.000 0.00 0.00 33.17 4.17
6542 9351 7.164171 GCAACAACGAATGCTACAAATATACAG 59.836 37.037 0.00 0.00 39.46 2.74
6560 9369 1.008538 GCCCTGAAGTGCAACAACG 60.009 57.895 0.00 0.00 41.43 4.10
6570 9379 0.324091 AATCTTGGGCAGCCCTGAAG 60.324 55.000 31.51 25.37 45.70 3.02
6627 9439 3.205338 CCCACTTTTCAAGCCAAAAAGG 58.795 45.455 15.91 8.18 44.36 3.11
6751 9563 6.431722 CCTTTAGGAGAAACCCATAAATCCA 58.568 40.000 0.00 0.00 40.05 3.41
6771 9583 8.353423 ACATACAAACTATTGAAGATGCCTTT 57.647 30.769 0.00 0.00 38.94 3.11
6772 9584 7.944729 ACATACAAACTATTGAAGATGCCTT 57.055 32.000 0.00 0.00 38.94 4.35
6773 9585 7.944729 AACATACAAACTATTGAAGATGCCT 57.055 32.000 0.00 0.00 38.94 4.75
6774 9586 7.857885 GCTAACATACAAACTATTGAAGATGCC 59.142 37.037 0.00 0.00 38.94 4.40
6775 9587 8.616076 AGCTAACATACAAACTATTGAAGATGC 58.384 33.333 0.00 0.00 38.94 3.91
6778 9590 9.502091 ACAAGCTAACATACAAACTATTGAAGA 57.498 29.630 0.00 0.00 38.94 2.87
6780 9592 9.891828 CAACAAGCTAACATACAAACTATTGAA 57.108 29.630 0.00 0.00 38.94 2.69
6781 9593 8.511321 CCAACAAGCTAACATACAAACTATTGA 58.489 33.333 0.00 0.00 38.94 2.57
6782 9594 8.296713 ACCAACAAGCTAACATACAAACTATTG 58.703 33.333 0.00 0.00 42.46 1.90
6783 9595 8.404107 ACCAACAAGCTAACATACAAACTATT 57.596 30.769 0.00 0.00 0.00 1.73
6784 9596 7.996098 ACCAACAAGCTAACATACAAACTAT 57.004 32.000 0.00 0.00 0.00 2.12
6785 9597 8.905660 TTACCAACAAGCTAACATACAAACTA 57.094 30.769 0.00 0.00 0.00 2.24
6786 9598 7.811117 TTACCAACAAGCTAACATACAAACT 57.189 32.000 0.00 0.00 0.00 2.66
6787 9599 8.859517 TTTTACCAACAAGCTAACATACAAAC 57.140 30.769 0.00 0.00 0.00 2.93
6791 9603 9.233232 GCATATTTTACCAACAAGCTAACATAC 57.767 33.333 0.00 0.00 0.00 2.39
6792 9604 8.410141 GGCATATTTTACCAACAAGCTAACATA 58.590 33.333 0.00 0.00 0.00 2.29
6793 9605 7.093552 TGGCATATTTTACCAACAAGCTAACAT 60.094 33.333 0.00 0.00 0.00 2.71
6794 9606 6.209589 TGGCATATTTTACCAACAAGCTAACA 59.790 34.615 0.00 0.00 0.00 2.41
6795 9607 6.626302 TGGCATATTTTACCAACAAGCTAAC 58.374 36.000 0.00 0.00 0.00 2.34
6796 9608 6.842437 TGGCATATTTTACCAACAAGCTAA 57.158 33.333 0.00 0.00 0.00 3.09
6797 9609 6.379703 ACATGGCATATTTTACCAACAAGCTA 59.620 34.615 0.00 0.00 36.94 3.32
6798 9610 5.187576 ACATGGCATATTTTACCAACAAGCT 59.812 36.000 0.00 0.00 36.94 3.74
6799 9611 5.418676 ACATGGCATATTTTACCAACAAGC 58.581 37.500 0.00 0.00 36.94 4.01
6800 9612 6.629128 TGACATGGCATATTTTACCAACAAG 58.371 36.000 0.00 0.00 36.94 3.16
6801 9613 6.596309 TGACATGGCATATTTTACCAACAA 57.404 33.333 0.00 0.00 36.94 2.83
6802 9614 6.379417 TGATGACATGGCATATTTTACCAACA 59.621 34.615 15.77 0.61 36.94 3.33
6803 9615 6.804677 TGATGACATGGCATATTTTACCAAC 58.195 36.000 15.77 0.00 36.94 3.77
6804 9616 7.264221 GTTGATGACATGGCATATTTTACCAA 58.736 34.615 15.77 9.72 36.94 3.67
6805 9617 6.183360 GGTTGATGACATGGCATATTTTACCA 60.183 38.462 15.77 3.07 37.99 3.25
6806 9618 6.183360 TGGTTGATGACATGGCATATTTTACC 60.183 38.462 15.77 16.57 0.00 2.85
6807 9619 6.804677 TGGTTGATGACATGGCATATTTTAC 58.195 36.000 15.77 8.08 0.00 2.01
6808 9620 7.093596 TGTTGGTTGATGACATGGCATATTTTA 60.094 33.333 15.77 0.00 0.00 1.52
6809 9621 5.936187 TGGTTGATGACATGGCATATTTT 57.064 34.783 15.77 0.00 0.00 1.82
6810 9622 5.187381 TGTTGGTTGATGACATGGCATATTT 59.813 36.000 15.77 0.00 0.00 1.40
6811 9623 4.710865 TGTTGGTTGATGACATGGCATATT 59.289 37.500 15.77 0.00 0.00 1.28
6812 9624 4.098349 GTGTTGGTTGATGACATGGCATAT 59.902 41.667 15.77 0.00 0.00 1.78
6813 9625 3.443329 GTGTTGGTTGATGACATGGCATA 59.557 43.478 15.77 0.00 0.00 3.14
6814 9626 2.231964 GTGTTGGTTGATGACATGGCAT 59.768 45.455 15.73 15.73 0.00 4.40
6815 9627 1.612950 GTGTTGGTTGATGACATGGCA 59.387 47.619 2.18 2.18 0.00 4.92
6816 9628 1.067635 GGTGTTGGTTGATGACATGGC 60.068 52.381 0.00 0.00 0.00 4.40
6817 9629 2.517959 AGGTGTTGGTTGATGACATGG 58.482 47.619 0.00 0.00 0.00 3.66
6818 9630 5.009510 TGTTAAGGTGTTGGTTGATGACATG 59.990 40.000 0.00 0.00 0.00 3.21
6819 9631 5.136828 TGTTAAGGTGTTGGTTGATGACAT 58.863 37.500 0.00 0.00 0.00 3.06
6820 9632 4.527944 TGTTAAGGTGTTGGTTGATGACA 58.472 39.130 0.00 0.00 0.00 3.58
6821 9633 5.705609 ATGTTAAGGTGTTGGTTGATGAC 57.294 39.130 0.00 0.00 0.00 3.06
6822 9634 6.299922 TGTATGTTAAGGTGTTGGTTGATGA 58.700 36.000 0.00 0.00 0.00 2.92
6823 9635 6.567687 TGTATGTTAAGGTGTTGGTTGATG 57.432 37.500 0.00 0.00 0.00 3.07
6824 9636 6.547880 TGTTGTATGTTAAGGTGTTGGTTGAT 59.452 34.615 0.00 0.00 0.00 2.57
6825 9637 5.886474 TGTTGTATGTTAAGGTGTTGGTTGA 59.114 36.000 0.00 0.00 0.00 3.18
6826 9638 6.137794 TGTTGTATGTTAAGGTGTTGGTTG 57.862 37.500 0.00 0.00 0.00 3.77
6827 9639 6.378848 AGTTGTTGTATGTTAAGGTGTTGGTT 59.621 34.615 0.00 0.00 0.00 3.67
6828 9640 5.889289 AGTTGTTGTATGTTAAGGTGTTGGT 59.111 36.000 0.00 0.00 0.00 3.67
6829 9641 6.385649 AGTTGTTGTATGTTAAGGTGTTGG 57.614 37.500 0.00 0.00 0.00 3.77
6830 9642 7.476667 TGAAGTTGTTGTATGTTAAGGTGTTG 58.523 34.615 0.00 0.00 0.00 3.33
6831 9643 7.633193 TGAAGTTGTTGTATGTTAAGGTGTT 57.367 32.000 0.00 0.00 0.00 3.32
6832 9644 7.633193 TTGAAGTTGTTGTATGTTAAGGTGT 57.367 32.000 0.00 0.00 0.00 4.16
6833 9645 7.594758 CCATTGAAGTTGTTGTATGTTAAGGTG 59.405 37.037 0.00 0.00 0.00 4.00
6834 9646 7.504238 TCCATTGAAGTTGTTGTATGTTAAGGT 59.496 33.333 0.00 0.00 0.00 3.50
6835 9647 7.881142 TCCATTGAAGTTGTTGTATGTTAAGG 58.119 34.615 0.00 0.00 0.00 2.69
6836 9648 9.912634 AATCCATTGAAGTTGTTGTATGTTAAG 57.087 29.630 0.00 0.00 0.00 1.85
6850 9662 9.289782 GGCAAACTAGATATAATCCATTGAAGT 57.710 33.333 0.00 0.00 0.00 3.01
6851 9663 8.734386 GGGCAAACTAGATATAATCCATTGAAG 58.266 37.037 0.00 0.00 0.00 3.02
6852 9664 8.224025 TGGGCAAACTAGATATAATCCATTGAA 58.776 33.333 0.00 0.00 0.00 2.69
6853 9665 7.754624 TGGGCAAACTAGATATAATCCATTGA 58.245 34.615 0.00 0.00 0.00 2.57
6854 9666 8.408043 TTGGGCAAACTAGATATAATCCATTG 57.592 34.615 0.00 0.00 0.00 2.82
6856 9668 9.911788 CTATTGGGCAAACTAGATATAATCCAT 57.088 33.333 0.00 0.00 0.00 3.41
6857 9669 8.328758 CCTATTGGGCAAACTAGATATAATCCA 58.671 37.037 0.00 0.00 0.00 3.41
6858 9670 8.548877 TCCTATTGGGCAAACTAGATATAATCC 58.451 37.037 0.00 0.00 34.39 3.01
6860 9672 9.911788 CATCCTATTGGGCAAACTAGATATAAT 57.088 33.333 0.00 0.00 34.39 1.28
6861 9673 8.890472 ACATCCTATTGGGCAAACTAGATATAA 58.110 33.333 0.00 0.00 34.39 0.98
6862 9674 8.321353 CACATCCTATTGGGCAAACTAGATATA 58.679 37.037 0.00 0.00 34.39 0.86
6863 9675 7.017551 TCACATCCTATTGGGCAAACTAGATAT 59.982 37.037 0.00 0.00 34.39 1.63
6864 9676 6.328934 TCACATCCTATTGGGCAAACTAGATA 59.671 38.462 0.00 0.00 34.39 1.98
6865 9677 5.132648 TCACATCCTATTGGGCAAACTAGAT 59.867 40.000 0.00 0.00 34.39 1.98
6866 9678 4.473196 TCACATCCTATTGGGCAAACTAGA 59.527 41.667 0.00 0.00 34.39 2.43
6867 9679 4.780815 TCACATCCTATTGGGCAAACTAG 58.219 43.478 0.00 0.00 34.39 2.57
6868 9680 4.473196 TCTCACATCCTATTGGGCAAACTA 59.527 41.667 0.00 0.00 34.39 2.24
6869 9681 3.266772 TCTCACATCCTATTGGGCAAACT 59.733 43.478 0.00 0.00 34.39 2.66
6870 9682 3.620488 TCTCACATCCTATTGGGCAAAC 58.380 45.455 0.00 0.00 34.39 2.93
6871 9683 4.524802 ATCTCACATCCTATTGGGCAAA 57.475 40.909 0.00 0.00 34.39 3.68
6872 9684 5.645056 TTATCTCACATCCTATTGGGCAA 57.355 39.130 0.00 0.00 34.39 4.52
6873 9685 5.848286 ATTATCTCACATCCTATTGGGCA 57.152 39.130 0.00 0.00 34.39 5.36
6874 9686 8.680903 CATTTATTATCTCACATCCTATTGGGC 58.319 37.037 0.00 0.00 34.39 5.36
6875 9687 9.964354 TCATTTATTATCTCACATCCTATTGGG 57.036 33.333 0.00 0.00 0.00 4.12
6880 9692 9.159254 ACACCTCATTTATTATCTCACATCCTA 57.841 33.333 0.00 0.00 0.00 2.94
6881 9693 8.038862 ACACCTCATTTATTATCTCACATCCT 57.961 34.615 0.00 0.00 0.00 3.24
6882 9694 8.682936 AACACCTCATTTATTATCTCACATCC 57.317 34.615 0.00 0.00 0.00 3.51
6883 9695 9.553064 AGAACACCTCATTTATTATCTCACATC 57.447 33.333 0.00 0.00 0.00 3.06
6884 9696 9.553064 GAGAACACCTCATTTATTATCTCACAT 57.447 33.333 0.00 0.00 41.58 3.21
6885 9697 8.762645 AGAGAACACCTCATTTATTATCTCACA 58.237 33.333 0.00 0.00 44.40 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.