Multiple sequence alignment - TraesCS1A01G171900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G171900 chr1A 100.000 3672 0 0 1 3672 307059256 307062927 0.000000e+00 6782.0
1 TraesCS1A01G171900 chr1A 91.923 941 68 8 2642 3576 581464340 581463402 0.000000e+00 1310.0
2 TraesCS1A01G171900 chr1A 92.424 396 20 8 457 847 544132033 544131643 1.150000e-154 556.0
3 TraesCS1A01G171900 chr1A 90.465 409 30 8 457 860 379137118 379136714 6.980000e-147 531.0
4 TraesCS1A01G171900 chr1A 96.124 258 10 0 203 460 77062885 77062628 4.380000e-114 422.0
5 TraesCS1A01G171900 chr1A 100.000 52 0 0 203 254 77062955 77062904 3.020000e-16 97.1
6 TraesCS1A01G171900 chr1B 93.211 1797 79 17 871 2648 332074116 332072344 0.000000e+00 2603.0
7 TraesCS1A01G171900 chr1B 92.030 941 68 7 2642 3576 670208644 670207705 0.000000e+00 1315.0
8 TraesCS1A01G171900 chr1B 98.529 204 3 0 1 204 198754963 198754760 9.690000e-96 361.0
9 TraesCS1A01G171900 chr1B 90.640 203 19 0 1 203 268594035 268594237 1.680000e-68 270.0
10 TraesCS1A01G171900 chr1B 83.258 221 33 3 244 464 633761772 633761988 2.240000e-47 200.0
11 TraesCS1A01G171900 chr1B 86.316 95 12 1 3579 3672 641604196 641604102 6.490000e-18 102.0
12 TraesCS1A01G171900 chr1B 85.294 102 7 4 3579 3672 40193380 40193279 8.390000e-17 99.0
13 TraesCS1A01G171900 chr1B 92.308 52 2 1 3621 3672 470724955 470724906 5.090000e-09 73.1
14 TraesCS1A01G171900 chr1D 92.825 1561 81 11 1043 2594 246105746 246107284 0.000000e+00 2233.0
15 TraesCS1A01G171900 chr1D 91.925 161 11 2 873 1032 246105383 246105542 1.330000e-54 224.0
16 TraesCS1A01G171900 chr1D 98.507 67 1 0 2577 2643 246107353 246107419 6.440000e-23 119.0
17 TraesCS1A01G171900 chr7D 93.390 938 57 5 2644 3576 534523325 534522388 0.000000e+00 1384.0
18 TraesCS1A01G171900 chr5D 92.872 940 60 6 2642 3576 553025229 553026166 0.000000e+00 1358.0
19 TraesCS1A01G171900 chr5D 87.912 91 5 2 3588 3672 482925718 482925628 6.490000e-18 102.0
20 TraesCS1A01G171900 chr7A 92.447 940 65 6 2642 3576 674532946 674532008 0.000000e+00 1338.0
21 TraesCS1A01G171900 chr7A 91.971 411 24 7 457 862 645836913 645836507 5.320000e-158 568.0
22 TraesCS1A01G171900 chr7A 82.759 203 32 2 244 446 434778527 434778726 1.050000e-40 178.0
23 TraesCS1A01G171900 chr7A 84.783 92 4 5 3589 3672 693837975 693838064 2.350000e-12 84.2
24 TraesCS1A01G171900 chr2A 92.349 941 64 8 2642 3576 19962671 19963609 0.000000e+00 1332.0
25 TraesCS1A01G171900 chr2A 93.659 410 19 5 457 862 383249350 383248944 1.130000e-169 606.0
26 TraesCS1A01G171900 chr2A 92.457 411 23 6 454 860 172840779 172841185 6.840000e-162 580.0
27 TraesCS1A01G171900 chr2A 100.000 204 0 0 1 204 261671597 261671394 9.630000e-101 377.0
28 TraesCS1A01G171900 chr2A 99.510 204 1 0 1 204 279503067 279502864 4.480000e-99 372.0
29 TraesCS1A01G171900 chr2A 95.872 218 9 0 203 420 762854811 762854594 1.620000e-93 353.0
30 TraesCS1A01G171900 chr2A 80.645 217 33 9 249 462 256198864 256198654 3.800000e-35 159.0
31 TraesCS1A01G171900 chr2A 87.619 105 9 3 3571 3672 762812380 762812277 6.440000e-23 119.0
32 TraesCS1A01G171900 chrUn 92.324 938 65 6 2644 3576 42242253 42241318 0.000000e+00 1327.0
33 TraesCS1A01G171900 chrUn 91.809 940 69 7 2642 3576 268461672 268462608 0.000000e+00 1303.0
34 TraesCS1A01G171900 chrUn 95.455 264 11 1 203 465 284942268 284942531 1.580000e-113 420.0
35 TraesCS1A01G171900 chrUn 100.000 51 0 0 204 254 284942199 284942249 1.090000e-15 95.3
36 TraesCS1A01G171900 chr5B 91.915 940 69 6 2642 3576 628605979 628605042 0.000000e+00 1308.0
37 TraesCS1A01G171900 chr6A 93.484 399 18 6 457 850 2072708 2072313 1.470000e-163 586.0
38 TraesCS1A01G171900 chr5A 93.455 382 17 5 485 863 34918850 34918474 8.900000e-156 560.0
39 TraesCS1A01G171900 chr5A 80.751 213 33 8 249 458 139484916 139485123 3.800000e-35 159.0
40 TraesCS1A01G171900 chr5A 83.168 101 7 4 3579 3669 580844847 580844947 2.350000e-12 84.2
41 TraesCS1A01G171900 chr4A 91.198 409 26 7 457 859 536729181 536728777 6.930000e-152 547.0
42 TraesCS1A01G171900 chr4A 97.656 256 6 0 203 458 610812645 610812390 1.210000e-119 440.0
43 TraesCS1A01G171900 chr4A 81.373 204 19 7 3 204 466143122 466142936 8.220000e-32 148.0
44 TraesCS1A01G171900 chr4A 90.698 86 5 2 3589 3672 605648323 605648239 1.080000e-20 111.0
45 TraesCS1A01G171900 chr4A 86.275 102 6 5 3579 3672 712846711 712846610 1.800000e-18 104.0
46 TraesCS1A01G171900 chr4A 100.000 52 0 0 203 254 610812785 610812734 3.020000e-16 97.1
47 TraesCS1A01G171900 chr4A 100.000 51 0 0 204 254 610812714 610812664 1.090000e-15 95.3
48 TraesCS1A01G171900 chr2D 90.617 405 31 5 457 856 256897629 256897227 6.980000e-147 531.0
49 TraesCS1A01G171900 chr3D 89.904 416 35 5 457 868 555085937 555086349 2.510000e-146 529.0
50 TraesCS1A01G171900 chr3D 86.275 102 6 3 3579 3672 478422630 478422529 1.800000e-18 104.0
51 TraesCS1A01G171900 chr2B 98.537 205 2 1 1 204 73632244 73632448 9.690000e-96 361.0
52 TraesCS1A01G171900 chr2B 92.118 203 16 0 1 203 470513848 470513646 1.670000e-73 287.0
53 TraesCS1A01G171900 chr2B 85.870 92 5 3 3579 3662 621966537 621966628 1.400000e-14 91.6
54 TraesCS1A01G171900 chr2B 80.851 94 12 3 116 205 114646693 114646602 6.580000e-08 69.4
55 TraesCS1A01G171900 chr4D 84.158 202 16 5 1 202 469101730 469101545 8.100000e-42 182.0
56 TraesCS1A01G171900 chr3A 80.543 221 34 9 249 465 363951951 363951736 1.060000e-35 161.0
57 TraesCS1A01G171900 chr6B 79.821 223 38 7 246 465 21185491 21185273 4.910000e-34 156.0
58 TraesCS1A01G171900 chr6B 79.464 224 38 8 246 465 21198790 21198571 6.350000e-33 152.0
59 TraesCS1A01G171900 chr6B 87.755 98 7 2 3579 3672 101223397 101223301 3.880000e-20 110.0
60 TraesCS1A01G171900 chr3B 79.817 218 36 8 249 462 787251408 787251621 6.350000e-33 152.0
61 TraesCS1A01G171900 chr3B 83.158 95 11 2 116 206 581256180 581256273 8.450000e-12 82.4
62 TraesCS1A01G171900 chr3B 81.915 94 12 2 116 205 594662908 594662816 1.410000e-09 75.0
63 TraesCS1A01G171900 chr7B 80.097 206 21 8 3 204 689971227 689971416 6.400000e-28 135.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G171900 chr1A 307059256 307062927 3671 False 6782.000000 6782 100.000 1 3672 1 chr1A.!!$F1 3671
1 TraesCS1A01G171900 chr1A 581463402 581464340 938 True 1310.000000 1310 91.923 2642 3576 1 chr1A.!!$R3 934
2 TraesCS1A01G171900 chr1B 332072344 332074116 1772 True 2603.000000 2603 93.211 871 2648 1 chr1B.!!$R3 1777
3 TraesCS1A01G171900 chr1B 670207705 670208644 939 True 1315.000000 1315 92.030 2642 3576 1 chr1B.!!$R6 934
4 TraesCS1A01G171900 chr1D 246105383 246107419 2036 False 858.666667 2233 94.419 873 2643 3 chr1D.!!$F1 1770
5 TraesCS1A01G171900 chr7D 534522388 534523325 937 True 1384.000000 1384 93.390 2644 3576 1 chr7D.!!$R1 932
6 TraesCS1A01G171900 chr5D 553025229 553026166 937 False 1358.000000 1358 92.872 2642 3576 1 chr5D.!!$F1 934
7 TraesCS1A01G171900 chr7A 674532008 674532946 938 True 1338.000000 1338 92.447 2642 3576 1 chr7A.!!$R2 934
8 TraesCS1A01G171900 chr2A 19962671 19963609 938 False 1332.000000 1332 92.349 2642 3576 1 chr2A.!!$F1 934
9 TraesCS1A01G171900 chrUn 42241318 42242253 935 True 1327.000000 1327 92.324 2644 3576 1 chrUn.!!$R1 932
10 TraesCS1A01G171900 chrUn 268461672 268462608 936 False 1303.000000 1303 91.809 2642 3576 1 chrUn.!!$F1 934
11 TraesCS1A01G171900 chr5B 628605042 628605979 937 True 1308.000000 1308 91.915 2642 3576 1 chr5B.!!$R1 934

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
31 32 0.036388 TCTTGGGAATGGAGACGCAC 60.036 55.0 0.00 0.00 0.00 5.34 F
371 372 0.039618 AACAGGGATTGCGGGTTGAT 59.960 50.0 0.00 0.00 0.00 2.57 F
372 373 0.039618 ACAGGGATTGCGGGTTGATT 59.960 50.0 0.00 0.00 0.00 2.57 F
419 420 0.040067 AAACTACCACGACGACGGAC 60.040 55.0 12.58 0.00 44.46 4.79 F
1098 1293 0.112412 AGGTGCTTTTGGTCGGGATT 59.888 50.0 0.00 0.00 0.00 3.01 F
1647 1845 0.171679 TCAGGTACGTGCACCATACG 59.828 55.0 12.15 0.95 46.31 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1211 1409 0.602905 CACGGCCGTCTTCTTCCTTT 60.603 55.000 31.80 0.0 0.00 3.11 R
2198 2402 0.033405 TACCTTACGCCAGGAGAGCT 60.033 55.000 7.48 0.0 37.39 4.09 R
2352 2556 3.917329 TGCATCTCATAGTAGTACGCC 57.083 47.619 0.00 0.0 0.00 5.68 R
2353 2557 4.854291 GTCATGCATCTCATAGTAGTACGC 59.146 45.833 0.00 0.0 33.19 4.42 R
2549 2753 0.246635 GCACACAGTACATCGGACCT 59.753 55.000 0.00 0.0 0.00 3.85 R
3070 3383 0.254178 CTACAGGAGCTGGCATGGTT 59.746 55.000 0.00 0.0 35.51 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.301293 GGGAGCTCAGGTTCTTGGG 59.699 63.158 17.19 0.00 0.00 4.12
19 20 1.201429 GGGAGCTCAGGTTCTTGGGA 61.201 60.000 17.19 0.00 0.00 4.37
20 21 0.693049 GGAGCTCAGGTTCTTGGGAA 59.307 55.000 17.19 0.00 0.00 3.97
21 22 1.283321 GGAGCTCAGGTTCTTGGGAAT 59.717 52.381 17.19 0.00 33.71 3.01
22 23 2.363683 GAGCTCAGGTTCTTGGGAATG 58.636 52.381 9.40 0.00 33.71 2.67
23 24 1.005215 AGCTCAGGTTCTTGGGAATGG 59.995 52.381 0.00 0.00 33.71 3.16
24 25 1.004745 GCTCAGGTTCTTGGGAATGGA 59.995 52.381 0.00 0.00 33.71 3.41
25 26 2.943199 GCTCAGGTTCTTGGGAATGGAG 60.943 54.545 0.00 0.00 33.71 3.86
26 27 2.573462 CTCAGGTTCTTGGGAATGGAGA 59.427 50.000 0.00 0.00 32.56 3.71
27 28 2.305927 TCAGGTTCTTGGGAATGGAGAC 59.694 50.000 0.00 0.00 33.71 3.36
28 29 1.279271 AGGTTCTTGGGAATGGAGACG 59.721 52.381 0.00 0.00 33.71 4.18
29 30 1.087501 GTTCTTGGGAATGGAGACGC 58.912 55.000 0.00 0.00 33.71 5.19
30 31 0.690192 TTCTTGGGAATGGAGACGCA 59.310 50.000 0.00 0.00 0.00 5.24
31 32 0.036388 TCTTGGGAATGGAGACGCAC 60.036 55.000 0.00 0.00 0.00 5.34
32 33 1.002624 TTGGGAATGGAGACGCACC 60.003 57.895 0.00 0.00 0.00 5.01
33 34 1.488705 TTGGGAATGGAGACGCACCT 61.489 55.000 0.00 0.00 0.00 4.00
34 35 0.616395 TGGGAATGGAGACGCACCTA 60.616 55.000 0.00 0.00 0.00 3.08
35 36 0.179081 GGGAATGGAGACGCACCTAC 60.179 60.000 0.00 0.00 0.00 3.18
36 37 0.535335 GGAATGGAGACGCACCTACA 59.465 55.000 0.00 0.00 0.00 2.74
37 38 1.471676 GGAATGGAGACGCACCTACAG 60.472 57.143 0.00 0.00 29.13 2.74
38 39 0.537188 AATGGAGACGCACCTACAGG 59.463 55.000 0.00 0.00 42.17 4.00
39 40 1.330655 ATGGAGACGCACCTACAGGG 61.331 60.000 0.00 0.00 40.27 4.45
40 41 2.722201 GGAGACGCACCTACAGGGG 61.722 68.421 0.00 0.00 43.01 4.79
41 42 2.683933 AGACGCACCTACAGGGGG 60.684 66.667 0.00 0.06 39.60 5.40
46 47 4.115199 CACCTACAGGGGGCTGGC 62.115 72.222 0.00 0.00 40.27 4.85
49 50 3.164269 CTACAGGGGGCTGGCGAT 61.164 66.667 0.00 0.00 0.00 4.58
50 51 3.466791 CTACAGGGGGCTGGCGATG 62.467 68.421 0.00 0.00 0.00 3.84
111 112 4.300457 CTCATCGACGAGAGCAGC 57.700 61.111 1.34 0.00 34.79 5.25
112 113 1.299014 CTCATCGACGAGAGCAGCC 60.299 63.158 1.34 0.00 34.79 4.85
113 114 1.723608 CTCATCGACGAGAGCAGCCT 61.724 60.000 1.34 0.00 34.79 4.58
114 115 1.299014 CATCGACGAGAGCAGCCTC 60.299 63.158 3.01 0.00 38.42 4.70
115 116 2.485795 ATCGACGAGAGCAGCCTCC 61.486 63.158 3.01 0.00 38.96 4.30
116 117 4.200283 CGACGAGAGCAGCCTCCC 62.200 72.222 0.00 0.00 38.96 4.30
117 118 3.844090 GACGAGAGCAGCCTCCCC 61.844 72.222 0.00 0.00 38.96 4.81
133 134 3.363787 CCCCCTTCCACCTTTTCTG 57.636 57.895 0.00 0.00 0.00 3.02
134 135 0.900182 CCCCCTTCCACCTTTTCTGC 60.900 60.000 0.00 0.00 0.00 4.26
135 136 0.900182 CCCCTTCCACCTTTTCTGCC 60.900 60.000 0.00 0.00 0.00 4.85
136 137 1.244019 CCCTTCCACCTTTTCTGCCG 61.244 60.000 0.00 0.00 0.00 5.69
137 138 1.581447 CTTCCACCTTTTCTGCCGC 59.419 57.895 0.00 0.00 0.00 6.53
138 139 0.890996 CTTCCACCTTTTCTGCCGCT 60.891 55.000 0.00 0.00 0.00 5.52
139 140 1.172180 TTCCACCTTTTCTGCCGCTG 61.172 55.000 0.00 0.00 0.00 5.18
140 141 2.629656 CCACCTTTTCTGCCGCTGG 61.630 63.158 0.00 0.00 0.00 4.85
141 142 1.600636 CACCTTTTCTGCCGCTGGA 60.601 57.895 0.00 0.00 0.00 3.86
142 143 0.962356 CACCTTTTCTGCCGCTGGAT 60.962 55.000 0.00 0.00 0.00 3.41
143 144 0.618458 ACCTTTTCTGCCGCTGGATA 59.382 50.000 0.00 0.00 0.00 2.59
144 145 1.004277 ACCTTTTCTGCCGCTGGATAA 59.996 47.619 0.00 0.00 0.00 1.75
145 146 1.672881 CCTTTTCTGCCGCTGGATAAG 59.327 52.381 0.00 4.40 0.00 1.73
146 147 2.632377 CTTTTCTGCCGCTGGATAAGA 58.368 47.619 9.58 0.00 0.00 2.10
147 148 3.209410 CTTTTCTGCCGCTGGATAAGAT 58.791 45.455 9.58 0.00 0.00 2.40
148 149 2.245159 TTCTGCCGCTGGATAAGATG 57.755 50.000 0.00 0.00 0.00 2.90
149 150 1.413118 TCTGCCGCTGGATAAGATGA 58.587 50.000 0.00 0.00 0.00 2.92
150 151 1.762370 TCTGCCGCTGGATAAGATGAA 59.238 47.619 0.00 0.00 0.00 2.57
151 152 1.869767 CTGCCGCTGGATAAGATGAAC 59.130 52.381 0.00 0.00 0.00 3.18
152 153 1.209261 TGCCGCTGGATAAGATGAACA 59.791 47.619 0.00 0.00 0.00 3.18
153 154 2.288666 GCCGCTGGATAAGATGAACAA 58.711 47.619 0.00 0.00 0.00 2.83
154 155 2.682856 GCCGCTGGATAAGATGAACAAA 59.317 45.455 0.00 0.00 0.00 2.83
155 156 3.242870 GCCGCTGGATAAGATGAACAAAG 60.243 47.826 0.00 0.00 0.00 2.77
156 157 3.313526 CCGCTGGATAAGATGAACAAAGG 59.686 47.826 0.00 0.00 0.00 3.11
157 158 4.191544 CGCTGGATAAGATGAACAAAGGA 58.808 43.478 0.00 0.00 0.00 3.36
158 159 4.272018 CGCTGGATAAGATGAACAAAGGAG 59.728 45.833 0.00 0.00 0.00 3.69
159 160 4.036144 GCTGGATAAGATGAACAAAGGAGC 59.964 45.833 0.00 0.00 0.00 4.70
160 161 4.191544 TGGATAAGATGAACAAAGGAGCG 58.808 43.478 0.00 0.00 0.00 5.03
161 162 3.002759 GGATAAGATGAACAAAGGAGCGC 59.997 47.826 0.00 0.00 0.00 5.92
162 163 0.798776 AAGATGAACAAAGGAGCGCG 59.201 50.000 0.00 0.00 0.00 6.86
163 164 1.021390 AGATGAACAAAGGAGCGCGG 61.021 55.000 8.83 0.00 0.00 6.46
164 165 1.982073 GATGAACAAAGGAGCGCGGG 61.982 60.000 8.83 0.00 0.00 6.13
165 166 2.668550 GAACAAAGGAGCGCGGGT 60.669 61.111 8.83 0.00 0.00 5.28
166 167 2.966309 GAACAAAGGAGCGCGGGTG 61.966 63.158 8.83 0.00 0.00 4.61
167 168 3.469863 AACAAAGGAGCGCGGGTGA 62.470 57.895 8.83 0.00 0.00 4.02
168 169 2.668212 CAAAGGAGCGCGGGTGAA 60.668 61.111 8.83 0.00 0.00 3.18
169 170 2.112297 AAAGGAGCGCGGGTGAAA 59.888 55.556 8.83 0.00 0.00 2.69
170 171 1.303317 AAAGGAGCGCGGGTGAAAT 60.303 52.632 8.83 0.00 0.00 2.17
171 172 0.893727 AAAGGAGCGCGGGTGAAATT 60.894 50.000 8.83 0.00 0.00 1.82
172 173 1.586154 AAGGAGCGCGGGTGAAATTG 61.586 55.000 8.83 0.00 0.00 2.32
173 174 2.332654 GGAGCGCGGGTGAAATTGT 61.333 57.895 8.83 0.00 0.00 2.71
174 175 1.579429 GAGCGCGGGTGAAATTGTT 59.421 52.632 8.83 0.00 0.00 2.83
175 176 0.800012 GAGCGCGGGTGAAATTGTTA 59.200 50.000 8.83 0.00 0.00 2.41
176 177 0.519961 AGCGCGGGTGAAATTGTTAC 59.480 50.000 8.83 0.00 0.00 2.50
177 178 0.238817 GCGCGGGTGAAATTGTTACA 59.761 50.000 8.83 0.00 0.00 2.41
178 179 1.335142 GCGCGGGTGAAATTGTTACAA 60.335 47.619 8.83 0.00 0.00 2.41
179 180 2.859032 GCGCGGGTGAAATTGTTACAAA 60.859 45.455 8.83 0.00 0.00 2.83
180 181 3.372954 CGCGGGTGAAATTGTTACAAAA 58.627 40.909 0.66 0.00 0.00 2.44
181 182 3.984633 CGCGGGTGAAATTGTTACAAAAT 59.015 39.130 0.66 0.00 0.00 1.82
182 183 4.143431 CGCGGGTGAAATTGTTACAAAATG 60.143 41.667 0.66 0.00 0.00 2.32
183 184 4.376920 GCGGGTGAAATTGTTACAAAATGC 60.377 41.667 0.66 0.00 0.00 3.56
184 185 4.747108 CGGGTGAAATTGTTACAAAATGCA 59.253 37.500 0.66 0.00 0.00 3.96
185 186 5.107530 CGGGTGAAATTGTTACAAAATGCAG 60.108 40.000 0.66 0.00 0.00 4.41
186 187 5.179182 GGGTGAAATTGTTACAAAATGCAGG 59.821 40.000 0.66 0.00 0.00 4.85
187 188 5.179182 GGTGAAATTGTTACAAAATGCAGGG 59.821 40.000 0.66 0.00 0.00 4.45
188 189 5.988561 GTGAAATTGTTACAAAATGCAGGGA 59.011 36.000 0.66 0.00 0.00 4.20
189 190 6.650390 GTGAAATTGTTACAAAATGCAGGGAT 59.350 34.615 0.66 0.00 0.00 3.85
190 191 7.173047 GTGAAATTGTTACAAAATGCAGGGATT 59.827 33.333 0.66 0.00 0.00 3.01
191 192 8.370940 TGAAATTGTTACAAAATGCAGGGATTA 58.629 29.630 0.66 0.00 0.00 1.75
192 193 9.213799 GAAATTGTTACAAAATGCAGGGATTAA 57.786 29.630 0.66 0.00 0.00 1.40
193 194 9.737844 AAATTGTTACAAAATGCAGGGATTAAT 57.262 25.926 0.66 0.00 0.00 1.40
194 195 9.737844 AATTGTTACAAAATGCAGGGATTAATT 57.262 25.926 0.66 0.00 0.00 1.40
195 196 9.737844 ATTGTTACAAAATGCAGGGATTAATTT 57.262 25.926 0.66 0.00 0.00 1.82
196 197 8.545229 TGTTACAAAATGCAGGGATTAATTTG 57.455 30.769 0.00 0.00 33.68 2.32
197 198 7.118971 TGTTACAAAATGCAGGGATTAATTTGC 59.881 33.333 11.43 11.43 37.09 3.68
203 204 5.938438 TGCAGGGATTAATTTGCAAAAAC 57.062 34.783 17.19 6.00 42.96 2.43
204 205 5.371526 TGCAGGGATTAATTTGCAAAAACA 58.628 33.333 17.19 2.91 42.96 2.83
205 206 5.238214 TGCAGGGATTAATTTGCAAAAACAC 59.762 36.000 17.19 7.20 42.96 3.32
206 207 5.614449 GCAGGGATTAATTTGCAAAAACACG 60.614 40.000 17.19 0.46 36.59 4.49
207 208 4.450757 AGGGATTAATTTGCAAAAACACGC 59.549 37.500 17.19 13.95 0.00 5.34
208 209 4.377943 GGGATTAATTTGCAAAAACACGCC 60.378 41.667 17.19 12.84 0.00 5.68
209 210 4.377943 GGATTAATTTGCAAAAACACGCCC 60.378 41.667 17.19 8.10 0.00 6.13
210 211 2.323968 AATTTGCAAAAACACGCCCT 57.676 40.000 17.19 0.00 0.00 5.19
211 212 1.580815 ATTTGCAAAAACACGCCCTG 58.419 45.000 17.19 0.00 0.00 4.45
212 213 0.460987 TTTGCAAAAACACGCCCTGG 60.461 50.000 10.02 0.00 0.00 4.45
213 214 2.661537 GCAAAAACACGCCCTGGC 60.662 61.111 0.00 0.00 37.85 4.85
214 215 3.128375 CAAAAACACGCCCTGGCT 58.872 55.556 6.60 0.00 39.32 4.75
215 216 1.007387 CAAAAACACGCCCTGGCTC 60.007 57.895 6.60 0.00 39.32 4.70
216 217 2.200337 AAAAACACGCCCTGGCTCC 61.200 57.895 6.60 0.00 39.32 4.70
217 218 2.920076 AAAAACACGCCCTGGCTCCA 62.920 55.000 6.60 0.00 39.32 3.86
218 219 2.713531 AAAACACGCCCTGGCTCCAT 62.714 55.000 6.60 0.00 39.32 3.41
219 220 3.628646 AACACGCCCTGGCTCCATC 62.629 63.158 6.60 0.00 39.32 3.51
220 221 4.864334 CACGCCCTGGCTCCATCC 62.864 72.222 6.60 0.00 39.32 3.51
222 223 4.247380 CGCCCTGGCTCCATCCTC 62.247 72.222 6.60 0.00 39.32 3.71
223 224 3.883549 GCCCTGGCTCCATCCTCC 61.884 72.222 0.00 0.00 38.26 4.30
224 225 3.174265 CCCTGGCTCCATCCTCCC 61.174 72.222 0.00 0.00 0.00 4.30
225 226 2.367377 CCTGGCTCCATCCTCCCA 60.367 66.667 0.00 0.00 0.00 4.37
226 227 2.750657 CCTGGCTCCATCCTCCCAC 61.751 68.421 0.00 0.00 0.00 4.61
227 228 3.083349 TGGCTCCATCCTCCCACG 61.083 66.667 0.00 0.00 0.00 4.94
228 229 4.554036 GGCTCCATCCTCCCACGC 62.554 72.222 0.00 0.00 0.00 5.34
229 230 4.899239 GCTCCATCCTCCCACGCG 62.899 72.222 3.53 3.53 0.00 6.01
230 231 3.147595 CTCCATCCTCCCACGCGA 61.148 66.667 15.93 0.00 0.00 5.87
231 232 3.144120 CTCCATCCTCCCACGCGAG 62.144 68.421 15.93 4.16 0.00 5.03
259 260 4.089239 TGCCGGCGCAGGACATAA 62.089 61.111 31.49 6.51 41.12 1.90
260 261 2.591715 GCCGGCGCAGGACATAAT 60.592 61.111 31.49 0.00 34.03 1.28
261 262 2.896801 GCCGGCGCAGGACATAATG 61.897 63.158 31.49 0.84 34.03 1.90
262 263 2.253758 CCGGCGCAGGACATAATGG 61.254 63.158 23.19 0.00 0.00 3.16
263 264 1.227527 CGGCGCAGGACATAATGGA 60.228 57.895 10.83 0.00 0.00 3.41
264 265 0.603707 CGGCGCAGGACATAATGGAT 60.604 55.000 10.83 0.00 0.00 3.41
265 266 1.337728 CGGCGCAGGACATAATGGATA 60.338 52.381 10.83 0.00 0.00 2.59
266 267 2.778299 GGCGCAGGACATAATGGATAA 58.222 47.619 10.83 0.00 0.00 1.75
267 268 2.744202 GGCGCAGGACATAATGGATAAG 59.256 50.000 10.83 0.00 0.00 1.73
268 269 3.557054 GGCGCAGGACATAATGGATAAGA 60.557 47.826 10.83 0.00 0.00 2.10
269 270 3.433615 GCGCAGGACATAATGGATAAGAC 59.566 47.826 0.30 0.00 0.00 3.01
270 271 4.800914 GCGCAGGACATAATGGATAAGACT 60.801 45.833 0.30 0.00 0.00 3.24
271 272 5.566826 GCGCAGGACATAATGGATAAGACTA 60.567 44.000 0.30 0.00 0.00 2.59
272 273 6.634805 CGCAGGACATAATGGATAAGACTAT 58.365 40.000 0.00 0.00 0.00 2.12
273 274 7.630728 GCGCAGGACATAATGGATAAGACTATA 60.631 40.741 0.30 0.00 0.00 1.31
274 275 7.918033 CGCAGGACATAATGGATAAGACTATAG 59.082 40.741 0.00 0.00 0.00 1.31
275 276 8.972127 GCAGGACATAATGGATAAGACTATAGA 58.028 37.037 6.78 0.00 0.00 1.98
284 285 9.640952 AATGGATAAGACTATAGAGAGGATAGC 57.359 37.037 6.78 0.00 31.17 2.97
285 286 7.276658 TGGATAAGACTATAGAGAGGATAGCG 58.723 42.308 6.78 0.00 31.17 4.26
286 287 6.708949 GGATAAGACTATAGAGAGGATAGCGG 59.291 46.154 6.78 0.00 31.17 5.52
287 288 4.497291 AGACTATAGAGAGGATAGCGGG 57.503 50.000 6.78 0.00 31.17 6.13
288 289 3.847780 AGACTATAGAGAGGATAGCGGGT 59.152 47.826 6.78 0.00 31.17 5.28
289 290 4.290196 AGACTATAGAGAGGATAGCGGGTT 59.710 45.833 6.78 0.00 31.17 4.11
290 291 4.337145 ACTATAGAGAGGATAGCGGGTTG 58.663 47.826 6.78 0.00 31.17 3.77
291 292 3.527507 ATAGAGAGGATAGCGGGTTGA 57.472 47.619 0.00 0.00 0.00 3.18
292 293 2.160721 AGAGAGGATAGCGGGTTGAA 57.839 50.000 0.00 0.00 0.00 2.69
293 294 2.683768 AGAGAGGATAGCGGGTTGAAT 58.316 47.619 0.00 0.00 0.00 2.57
294 295 3.041946 AGAGAGGATAGCGGGTTGAATT 58.958 45.455 0.00 0.00 0.00 2.17
295 296 3.070302 AGAGAGGATAGCGGGTTGAATTC 59.930 47.826 0.00 0.00 0.00 2.17
296 297 2.771943 AGAGGATAGCGGGTTGAATTCA 59.228 45.455 3.38 3.38 0.00 2.57
297 298 3.199946 AGAGGATAGCGGGTTGAATTCAA 59.800 43.478 16.91 16.91 0.00 2.69
298 299 3.945285 GAGGATAGCGGGTTGAATTCAAA 59.055 43.478 22.07 6.46 37.63 2.69
299 300 4.536765 AGGATAGCGGGTTGAATTCAAAT 58.463 39.130 22.07 11.05 37.63 2.32
300 301 5.690865 AGGATAGCGGGTTGAATTCAAATA 58.309 37.500 22.07 10.60 37.63 1.40
301 302 6.126409 AGGATAGCGGGTTGAATTCAAATAA 58.874 36.000 22.07 6.01 37.63 1.40
302 303 6.039382 AGGATAGCGGGTTGAATTCAAATAAC 59.961 38.462 22.07 10.67 37.63 1.89
303 304 6.039382 GGATAGCGGGTTGAATTCAAATAACT 59.961 38.462 22.07 17.96 37.63 2.24
304 305 7.227910 GGATAGCGGGTTGAATTCAAATAACTA 59.772 37.037 22.07 19.28 37.63 2.24
305 306 8.691661 ATAGCGGGTTGAATTCAAATAACTAT 57.308 30.769 22.07 20.37 37.63 2.12
306 307 9.787435 ATAGCGGGTTGAATTCAAATAACTATA 57.213 29.630 22.07 9.98 37.63 1.31
307 308 8.154649 AGCGGGTTGAATTCAAATAACTATAG 57.845 34.615 22.07 0.00 37.63 1.31
308 309 6.856426 GCGGGTTGAATTCAAATAACTATAGC 59.144 38.462 22.07 12.89 37.63 2.97
309 310 7.069569 CGGGTTGAATTCAAATAACTATAGCG 58.930 38.462 22.07 8.06 37.63 4.26
310 311 6.856426 GGGTTGAATTCAAATAACTATAGCGC 59.144 38.462 22.07 10.20 37.63 5.92
311 312 6.856426 GGTTGAATTCAAATAACTATAGCGCC 59.144 38.462 22.07 10.54 37.63 6.53
312 313 7.255139 GGTTGAATTCAAATAACTATAGCGCCT 60.255 37.037 22.07 0.00 37.63 5.52
313 314 7.801716 TGAATTCAAATAACTATAGCGCCTT 57.198 32.000 5.45 0.00 0.00 4.35
314 315 8.220755 TGAATTCAAATAACTATAGCGCCTTT 57.779 30.769 5.45 0.00 0.00 3.11
315 316 8.682710 TGAATTCAAATAACTATAGCGCCTTTT 58.317 29.630 5.45 0.00 0.00 2.27
316 317 9.516314 GAATTCAAATAACTATAGCGCCTTTTT 57.484 29.630 2.29 0.00 0.00 1.94
345 346 5.069485 TGTGAAACGTTTTTCTACTACGC 57.931 39.130 15.89 6.82 42.39 4.42
346 347 4.025813 TGTGAAACGTTTTTCTACTACGCC 60.026 41.667 15.89 0.00 42.39 5.68
347 348 4.025813 GTGAAACGTTTTTCTACTACGCCA 60.026 41.667 15.89 0.73 41.64 5.69
348 349 4.025813 TGAAACGTTTTTCTACTACGCCAC 60.026 41.667 15.89 0.00 41.64 5.01
349 350 3.375782 ACGTTTTTCTACTACGCCACT 57.624 42.857 0.00 0.00 38.77 4.00
350 351 4.503741 ACGTTTTTCTACTACGCCACTA 57.496 40.909 0.00 0.00 38.77 2.74
351 352 4.870363 ACGTTTTTCTACTACGCCACTAA 58.130 39.130 0.00 0.00 38.77 2.24
352 353 5.288804 ACGTTTTTCTACTACGCCACTAAA 58.711 37.500 0.00 0.00 38.77 1.85
353 354 5.752955 ACGTTTTTCTACTACGCCACTAAAA 59.247 36.000 0.00 0.00 38.77 1.52
354 355 6.067039 CGTTTTTCTACTACGCCACTAAAAC 58.933 40.000 0.00 0.00 33.31 2.43
355 356 6.292274 CGTTTTTCTACTACGCCACTAAAACA 60.292 38.462 0.00 0.00 35.22 2.83
356 357 6.774354 TTTTCTACTACGCCACTAAAACAG 57.226 37.500 0.00 0.00 0.00 3.16
357 358 4.445452 TCTACTACGCCACTAAAACAGG 57.555 45.455 0.00 0.00 0.00 4.00
358 359 2.467566 ACTACGCCACTAAAACAGGG 57.532 50.000 0.00 0.00 0.00 4.45
359 360 1.972795 ACTACGCCACTAAAACAGGGA 59.027 47.619 0.00 0.00 0.00 4.20
360 361 2.570302 ACTACGCCACTAAAACAGGGAT 59.430 45.455 0.00 0.00 0.00 3.85
361 362 2.579410 ACGCCACTAAAACAGGGATT 57.421 45.000 0.00 0.00 0.00 3.01
362 363 2.159382 ACGCCACTAAAACAGGGATTG 58.841 47.619 0.00 0.00 0.00 2.67
363 364 1.135402 CGCCACTAAAACAGGGATTGC 60.135 52.381 0.00 0.00 0.00 3.56
364 365 1.135402 GCCACTAAAACAGGGATTGCG 60.135 52.381 0.00 0.00 0.00 4.85
365 366 1.472480 CCACTAAAACAGGGATTGCGG 59.528 52.381 0.00 0.00 0.00 5.69
366 367 1.472480 CACTAAAACAGGGATTGCGGG 59.528 52.381 0.00 0.00 0.00 6.13
367 368 1.074889 ACTAAAACAGGGATTGCGGGT 59.925 47.619 0.00 0.00 0.00 5.28
368 369 2.167662 CTAAAACAGGGATTGCGGGTT 58.832 47.619 0.00 0.00 0.00 4.11
369 370 0.678950 AAAACAGGGATTGCGGGTTG 59.321 50.000 0.00 0.00 0.00 3.77
370 371 0.178975 AAACAGGGATTGCGGGTTGA 60.179 50.000 0.00 0.00 0.00 3.18
371 372 0.039618 AACAGGGATTGCGGGTTGAT 59.960 50.000 0.00 0.00 0.00 2.57
372 373 0.039618 ACAGGGATTGCGGGTTGATT 59.960 50.000 0.00 0.00 0.00 2.57
373 374 1.185315 CAGGGATTGCGGGTTGATTT 58.815 50.000 0.00 0.00 0.00 2.17
374 375 1.134946 CAGGGATTGCGGGTTGATTTC 59.865 52.381 0.00 0.00 0.00 2.17
375 376 1.181786 GGGATTGCGGGTTGATTTCA 58.818 50.000 0.00 0.00 0.00 2.69
376 377 1.756538 GGGATTGCGGGTTGATTTCAT 59.243 47.619 0.00 0.00 0.00 2.57
377 378 2.481795 GGGATTGCGGGTTGATTTCATG 60.482 50.000 0.00 0.00 0.00 3.07
378 379 2.166254 GGATTGCGGGTTGATTTCATGT 59.834 45.455 0.00 0.00 0.00 3.21
379 380 3.380004 GGATTGCGGGTTGATTTCATGTA 59.620 43.478 0.00 0.00 0.00 2.29
380 381 4.142271 GGATTGCGGGTTGATTTCATGTAA 60.142 41.667 0.00 0.00 0.00 2.41
381 382 4.855715 TTGCGGGTTGATTTCATGTAAA 57.144 36.364 0.00 0.00 0.00 2.01
382 383 4.167554 TGCGGGTTGATTTCATGTAAAC 57.832 40.909 0.00 0.00 0.00 2.01
383 384 3.057174 TGCGGGTTGATTTCATGTAAACC 60.057 43.478 0.00 1.36 39.67 3.27
384 385 3.057174 GCGGGTTGATTTCATGTAAACCA 60.057 43.478 14.81 4.23 41.71 3.67
385 386 4.559704 GCGGGTTGATTTCATGTAAACCAA 60.560 41.667 14.81 8.62 41.71 3.67
386 387 5.160641 CGGGTTGATTTCATGTAAACCAAG 58.839 41.667 14.81 8.08 41.71 3.61
387 388 5.478407 GGGTTGATTTCATGTAAACCAAGG 58.522 41.667 14.81 0.00 41.71 3.61
388 389 5.478407 GGTTGATTTCATGTAAACCAAGGG 58.522 41.667 10.66 0.00 40.05 3.95
389 390 5.478407 GTTGATTTCATGTAAACCAAGGGG 58.522 41.667 0.00 0.00 41.29 4.79
390 391 3.513515 TGATTTCATGTAAACCAAGGGGC 59.486 43.478 0.00 0.00 37.90 5.80
391 392 2.990740 TTCATGTAAACCAAGGGGCT 57.009 45.000 0.00 0.00 37.90 5.19
392 393 2.990740 TCATGTAAACCAAGGGGCTT 57.009 45.000 0.00 0.00 37.90 4.35
393 394 3.252554 TCATGTAAACCAAGGGGCTTT 57.747 42.857 0.00 0.00 37.90 3.51
394 395 3.582164 TCATGTAAACCAAGGGGCTTTT 58.418 40.909 0.00 0.00 37.90 2.27
395 396 3.970640 TCATGTAAACCAAGGGGCTTTTT 59.029 39.130 0.00 0.00 37.90 1.94
416 417 5.990745 TTTATAAAACTACCACGACGACG 57.009 39.130 5.58 5.58 45.75 5.12
417 418 2.330231 TAAAACTACCACGACGACGG 57.670 50.000 12.58 3.98 44.46 4.79
418 419 0.667993 AAAACTACCACGACGACGGA 59.332 50.000 12.58 0.00 44.46 4.69
419 420 0.040067 AAACTACCACGACGACGGAC 60.040 55.000 12.58 0.00 44.46 4.79
421 422 2.356913 TACCACGACGACGGACGA 60.357 61.111 19.75 0.00 45.77 4.20
422 423 2.554365 CTACCACGACGACGGACGAC 62.554 65.000 19.75 0.00 45.77 4.34
423 424 4.748679 CCACGACGACGGACGACC 62.749 72.222 19.75 0.00 45.77 4.79
424 425 4.016629 CACGACGACGGACGACCA 62.017 66.667 19.75 0.00 45.77 4.02
425 426 3.720193 ACGACGACGGACGACCAG 61.720 66.667 19.75 0.00 45.77 4.00
426 427 3.417224 CGACGACGGACGACCAGA 61.417 66.667 6.90 0.00 45.77 3.86
427 428 2.949106 GACGACGGACGACCAGAA 59.051 61.111 6.90 0.00 45.77 3.02
428 429 1.154263 GACGACGGACGACCAGAAG 60.154 63.158 6.90 0.00 45.77 2.85
429 430 2.504244 CGACGGACGACCAGAAGC 60.504 66.667 4.48 0.00 45.77 3.86
430 431 2.649034 GACGGACGACCAGAAGCA 59.351 61.111 4.48 0.00 35.59 3.91
431 432 1.733399 GACGGACGACCAGAAGCAC 60.733 63.158 4.48 0.00 35.59 4.40
432 433 2.143594 GACGGACGACCAGAAGCACT 62.144 60.000 4.48 0.00 35.59 4.40
433 434 1.444553 CGGACGACCAGAAGCACTC 60.445 63.158 4.48 0.00 35.59 3.51
434 435 1.079750 GGACGACCAGAAGCACTCC 60.080 63.158 0.00 0.00 35.97 3.85
435 436 1.444553 GACGACCAGAAGCACTCCG 60.445 63.158 0.00 0.00 0.00 4.63
436 437 2.143594 GACGACCAGAAGCACTCCGT 62.144 60.000 0.00 0.00 0.00 4.69
437 438 1.734477 CGACCAGAAGCACTCCGTG 60.734 63.158 0.00 0.00 36.51 4.94
451 452 4.369182 CACTCCGTGCTTTATTAGTAGGG 58.631 47.826 0.00 0.00 43.43 3.53
452 453 4.098960 CACTCCGTGCTTTATTAGTAGGGA 59.901 45.833 0.00 0.00 46.81 4.20
454 455 5.680594 TCCGTGCTTTATTAGTAGGGAAA 57.319 39.130 2.51 0.00 46.26 3.13
455 456 5.667466 TCCGTGCTTTATTAGTAGGGAAAG 58.333 41.667 2.51 0.00 46.26 2.62
456 457 5.422970 TCCGTGCTTTATTAGTAGGGAAAGA 59.577 40.000 2.51 0.00 46.26 2.52
457 458 6.099269 TCCGTGCTTTATTAGTAGGGAAAGAT 59.901 38.462 2.51 0.00 46.26 2.40
458 459 7.288389 TCCGTGCTTTATTAGTAGGGAAAGATA 59.712 37.037 2.51 0.00 46.26 1.98
459 460 8.095169 CCGTGCTTTATTAGTAGGGAAAGATAT 58.905 37.037 0.00 0.00 44.42 1.63
471 472 6.980416 AGGGAAAGATATATATAGGGTCGC 57.020 41.667 0.00 0.76 0.00 5.19
472 473 5.535406 AGGGAAAGATATATATAGGGTCGCG 59.465 44.000 0.00 0.00 0.00 5.87
473 474 5.221130 GGAAAGATATATATAGGGTCGCGC 58.779 45.833 0.00 0.00 0.00 6.86
474 475 5.009811 GGAAAGATATATATAGGGTCGCGCT 59.990 44.000 5.56 0.00 0.00 5.92
475 476 6.206243 GGAAAGATATATATAGGGTCGCGCTA 59.794 42.308 5.56 0.00 33.62 4.26
476 477 7.094291 GGAAAGATATATATAGGGTCGCGCTAT 60.094 40.741 5.56 16.35 41.39 2.97
477 478 7.762588 AAGATATATATAGGGTCGCGCTATT 57.237 36.000 17.00 10.35 39.65 1.73
478 479 7.380431 AGATATATATAGGGTCGCGCTATTC 57.620 40.000 17.00 10.73 39.65 1.75
479 480 2.846039 ATATAGGGTCGCGCTATTCG 57.154 50.000 17.00 0.00 39.65 3.34
480 481 1.527034 TATAGGGTCGCGCTATTCGT 58.473 50.000 17.00 0.00 39.65 3.85
481 482 0.240411 ATAGGGTCGCGCTATTCGTC 59.760 55.000 5.56 0.00 36.44 4.20
482 483 1.096967 TAGGGTCGCGCTATTCGTCA 61.097 55.000 5.56 0.00 41.07 4.35
483 484 1.299926 GGGTCGCGCTATTCGTCAT 60.300 57.895 5.56 0.00 41.07 3.06
484 485 1.276145 GGGTCGCGCTATTCGTCATC 61.276 60.000 5.56 0.00 41.07 2.92
485 486 0.317938 GGTCGCGCTATTCGTCATCT 60.318 55.000 5.56 0.00 41.07 2.90
486 487 0.772926 GTCGCGCTATTCGTCATCTG 59.227 55.000 5.56 0.00 41.07 2.90
487 488 0.317854 TCGCGCTATTCGTCATCTGG 60.318 55.000 5.56 0.00 41.07 3.86
488 489 1.278172 CGCGCTATTCGTCATCTGGG 61.278 60.000 5.56 0.00 41.07 4.45
489 490 0.249489 GCGCTATTCGTCATCTGGGT 60.249 55.000 0.00 0.00 41.07 4.51
490 491 1.491670 CGCTATTCGTCATCTGGGTG 58.508 55.000 0.00 0.00 0.00 4.61
491 492 1.067060 CGCTATTCGTCATCTGGGTGA 59.933 52.381 0.00 0.00 0.00 4.02
492 493 2.748605 GCTATTCGTCATCTGGGTGAG 58.251 52.381 0.00 0.00 0.00 3.51
493 494 2.546795 GCTATTCGTCATCTGGGTGAGG 60.547 54.545 0.00 0.00 35.81 3.86
494 495 1.866015 ATTCGTCATCTGGGTGAGGA 58.134 50.000 2.62 2.62 40.18 3.71
495 496 1.639722 TTCGTCATCTGGGTGAGGAA 58.360 50.000 12.92 12.92 45.42 3.36
496 497 1.866015 TCGTCATCTGGGTGAGGAAT 58.134 50.000 4.10 0.00 39.31 3.01
497 498 3.026707 TCGTCATCTGGGTGAGGAATA 57.973 47.619 4.10 0.00 39.31 1.75
498 499 3.576861 TCGTCATCTGGGTGAGGAATAT 58.423 45.455 4.10 0.00 39.31 1.28
499 500 3.967326 TCGTCATCTGGGTGAGGAATATT 59.033 43.478 4.10 0.00 39.31 1.28
500 501 4.408921 TCGTCATCTGGGTGAGGAATATTT 59.591 41.667 4.10 0.00 39.31 1.40
501 502 5.600898 TCGTCATCTGGGTGAGGAATATTTA 59.399 40.000 4.10 0.00 39.31 1.40
502 503 6.270000 TCGTCATCTGGGTGAGGAATATTTAT 59.730 38.462 4.10 0.00 39.31 1.40
503 504 6.936900 CGTCATCTGGGTGAGGAATATTTATT 59.063 38.462 0.00 0.00 37.23 1.40
504 505 7.118390 CGTCATCTGGGTGAGGAATATTTATTC 59.882 40.741 2.32 2.32 37.23 1.75
505 506 8.160106 GTCATCTGGGTGAGGAATATTTATTCT 58.840 37.037 9.53 0.00 41.33 2.40
506 507 8.727149 TCATCTGGGTGAGGAATATTTATTCTT 58.273 33.333 9.53 3.02 41.33 2.52
507 508 9.359653 CATCTGGGTGAGGAATATTTATTCTTT 57.640 33.333 9.53 0.66 41.33 2.52
511 512 9.807921 TGGGTGAGGAATATTTATTCTTTATCC 57.192 33.333 8.65 8.65 38.34 2.59
512 513 9.244292 GGGTGAGGAATATTTATTCTTTATCCC 57.756 37.037 9.53 10.43 41.33 3.85
513 514 9.244292 GGTGAGGAATATTTATTCTTTATCCCC 57.756 37.037 9.53 2.59 41.33 4.81
527 528 7.749377 TCTTTATCCCCTCTCTATTTTGACA 57.251 36.000 0.00 0.00 0.00 3.58
528 529 8.337118 TCTTTATCCCCTCTCTATTTTGACAT 57.663 34.615 0.00 0.00 0.00 3.06
529 530 8.432805 TCTTTATCCCCTCTCTATTTTGACATC 58.567 37.037 0.00 0.00 0.00 3.06
530 531 7.690454 TTATCCCCTCTCTATTTTGACATCA 57.310 36.000 0.00 0.00 0.00 3.07
531 532 6.581388 ATCCCCTCTCTATTTTGACATCAA 57.419 37.500 0.00 0.00 0.00 2.57
532 533 6.581388 TCCCCTCTCTATTTTGACATCAAT 57.419 37.500 0.00 0.00 35.55 2.57
533 534 6.359804 TCCCCTCTCTATTTTGACATCAATG 58.640 40.000 0.00 0.00 35.55 2.82
534 535 6.158520 TCCCCTCTCTATTTTGACATCAATGA 59.841 38.462 0.00 0.00 35.55 2.57
535 536 6.830324 CCCCTCTCTATTTTGACATCAATGAA 59.170 38.462 0.00 0.00 35.55 2.57
536 537 7.201767 CCCCTCTCTATTTTGACATCAATGAAC 60.202 40.741 0.00 0.00 35.55 3.18
537 538 7.201767 CCCTCTCTATTTTGACATCAATGAACC 60.202 40.741 0.00 0.00 35.55 3.62
538 539 7.307493 TCTCTATTTTGACATCAATGAACCG 57.693 36.000 0.00 0.00 35.55 4.44
539 540 6.878923 TCTCTATTTTGACATCAATGAACCGT 59.121 34.615 0.00 0.00 35.55 4.83
540 541 8.038351 TCTCTATTTTGACATCAATGAACCGTA 58.962 33.333 0.00 0.00 35.55 4.02
541 542 8.731275 TCTATTTTGACATCAATGAACCGTAT 57.269 30.769 0.00 0.00 35.55 3.06
542 543 9.173021 TCTATTTTGACATCAATGAACCGTATT 57.827 29.630 0.00 0.00 35.55 1.89
543 544 9.787532 CTATTTTGACATCAATGAACCGTATTT 57.212 29.630 0.00 0.00 35.55 1.40
545 546 8.879342 TTTTGACATCAATGAACCGTATTTTT 57.121 26.923 0.00 0.00 35.55 1.94
546 547 9.967346 TTTTGACATCAATGAACCGTATTTTTA 57.033 25.926 0.00 0.00 35.55 1.52
547 548 8.958175 TTGACATCAATGAACCGTATTTTTAC 57.042 30.769 0.00 0.00 0.00 2.01
548 549 7.237871 TGACATCAATGAACCGTATTTTTACG 58.762 34.615 0.00 0.00 42.56 3.18
549 550 7.095144 TGACATCAATGAACCGTATTTTTACGT 60.095 33.333 0.00 0.00 41.46 3.57
550 551 7.586747 ACATCAATGAACCGTATTTTTACGTT 58.413 30.769 0.00 0.49 41.46 3.99
551 552 8.077386 ACATCAATGAACCGTATTTTTACGTTT 58.923 29.630 0.00 0.00 41.46 3.60
552 553 8.572151 CATCAATGAACCGTATTTTTACGTTTC 58.428 33.333 0.00 8.33 42.55 2.78
553 554 6.791299 TCAATGAACCGTATTTTTACGTTTCG 59.209 34.615 0.00 0.00 44.26 3.46
554 555 5.649602 TGAACCGTATTTTTACGTTTCGT 57.350 34.783 0.00 0.00 44.26 3.85
555 556 6.755461 TGAACCGTATTTTTACGTTTCGTA 57.245 33.333 0.00 0.00 44.26 3.43
572 573 9.719279 ACGTTTCGTAAATTTTGTCTTATTTCA 57.281 25.926 0.00 0.00 38.73 2.69
607 608 9.614792 AGAGAATGTAAGAAAATATGTACCCAC 57.385 33.333 0.00 0.00 0.00 4.61
608 609 8.747538 AGAATGTAAGAAAATATGTACCCACC 57.252 34.615 0.00 0.00 0.00 4.61
609 610 8.333235 AGAATGTAAGAAAATATGTACCCACCA 58.667 33.333 0.00 0.00 0.00 4.17
610 611 9.131791 GAATGTAAGAAAATATGTACCCACCAT 57.868 33.333 0.00 0.00 0.00 3.55
613 614 9.976776 TGTAAGAAAATATGTACCCACCATAAA 57.023 29.630 0.00 0.00 0.00 1.40
808 809 2.646930 TCGTAAGATTACCTCGGCTGA 58.353 47.619 0.00 0.00 45.01 4.26
809 810 3.018856 TCGTAAGATTACCTCGGCTGAA 58.981 45.455 0.00 0.00 45.01 3.02
810 811 3.066342 TCGTAAGATTACCTCGGCTGAAG 59.934 47.826 0.00 0.00 45.01 3.02
811 812 3.066342 CGTAAGATTACCTCGGCTGAAGA 59.934 47.826 0.00 0.00 43.02 2.87
812 813 4.439700 CGTAAGATTACCTCGGCTGAAGAA 60.440 45.833 0.00 0.00 43.02 2.52
813 814 4.762289 AAGATTACCTCGGCTGAAGAAT 57.238 40.909 0.00 0.00 0.00 2.40
814 815 5.871396 AAGATTACCTCGGCTGAAGAATA 57.129 39.130 0.00 0.00 0.00 1.75
815 816 5.871396 AGATTACCTCGGCTGAAGAATAA 57.129 39.130 0.00 0.00 0.00 1.40
816 817 5.602628 AGATTACCTCGGCTGAAGAATAAC 58.397 41.667 0.00 0.00 0.00 1.89
817 818 5.364157 AGATTACCTCGGCTGAAGAATAACT 59.636 40.000 0.00 0.00 0.00 2.24
818 819 3.983044 ACCTCGGCTGAAGAATAACTT 57.017 42.857 0.00 0.00 42.03 2.66
819 820 6.534475 TTACCTCGGCTGAAGAATAACTTA 57.466 37.500 0.00 0.00 39.13 2.24
820 821 5.615925 ACCTCGGCTGAAGAATAACTTAT 57.384 39.130 0.00 0.00 39.13 1.73
821 822 5.990668 ACCTCGGCTGAAGAATAACTTATT 58.009 37.500 0.00 0.00 39.13 1.40
822 823 6.049790 ACCTCGGCTGAAGAATAACTTATTC 58.950 40.000 12.07 12.07 43.77 1.75
833 834 5.683859 GAATAACTTATTCTGCATCCTGCG 58.316 41.667 12.55 0.00 39.61 5.18
834 835 5.237344 GAATAACTTATTCTGCATCCTGCGT 59.763 40.000 12.55 0.00 39.61 5.24
835 836 6.782390 GAATAACTTATTCTGCATCCTGCGTG 60.782 42.308 12.55 0.00 39.61 5.34
836 837 8.846849 GAATAACTTATTCTGCATCCTGCGTGA 61.847 40.741 12.55 0.00 39.61 4.35
844 845 2.487934 GCATCCTGCGTGATGAATAGT 58.512 47.619 16.86 0.00 43.94 2.12
845 846 3.653344 GCATCCTGCGTGATGAATAGTA 58.347 45.455 16.86 0.00 43.94 1.82
846 847 4.058124 GCATCCTGCGTGATGAATAGTAA 58.942 43.478 16.86 0.00 43.94 2.24
847 848 4.084328 GCATCCTGCGTGATGAATAGTAAC 60.084 45.833 16.86 0.00 43.94 2.50
848 849 4.729227 TCCTGCGTGATGAATAGTAACA 57.271 40.909 0.00 0.00 0.00 2.41
849 850 4.430007 TCCTGCGTGATGAATAGTAACAC 58.570 43.478 0.00 0.00 0.00 3.32
850 851 4.159693 TCCTGCGTGATGAATAGTAACACT 59.840 41.667 0.00 0.00 0.00 3.55
851 852 5.358725 TCCTGCGTGATGAATAGTAACACTA 59.641 40.000 0.00 0.00 34.82 2.74
852 853 6.040504 TCCTGCGTGATGAATAGTAACACTAT 59.959 38.462 0.00 0.00 42.86 2.12
853 854 7.229907 TCCTGCGTGATGAATAGTAACACTATA 59.770 37.037 0.00 0.00 40.32 1.31
854 855 8.029522 CCTGCGTGATGAATAGTAACACTATAT 58.970 37.037 0.00 0.00 40.32 0.86
889 890 1.745232 TTGCCGCGTTTCCTATCATT 58.255 45.000 4.92 0.00 0.00 2.57
890 891 1.013596 TGCCGCGTTTCCTATCATTG 58.986 50.000 4.92 0.00 0.00 2.82
931 933 9.688091 ATTGTATCACGTCTCCTATAGATACAT 57.312 33.333 16.87 8.55 43.97 2.29
938 940 6.885376 ACGTCTCCTATAGATACATCCGAAAT 59.115 38.462 0.00 0.00 36.36 2.17
987 989 6.426025 AGTGTGAATTTCTTCCCTACGTTTAC 59.574 38.462 0.00 0.00 0.00 2.01
1016 1018 3.978687 AGTTCGTATAAATCTCAGCCCG 58.021 45.455 0.00 0.00 0.00 6.13
1091 1286 1.235724 GCGAGTAAGGTGCTTTTGGT 58.764 50.000 0.00 0.00 0.00 3.67
1098 1293 0.112412 AGGTGCTTTTGGTCGGGATT 59.888 50.000 0.00 0.00 0.00 3.01
1199 1397 2.532843 ACAGGGGTCTACACGTAACAT 58.467 47.619 0.00 0.00 0.00 2.71
1200 1398 3.700538 ACAGGGGTCTACACGTAACATA 58.299 45.455 0.00 0.00 0.00 2.29
1201 1399 4.088634 ACAGGGGTCTACACGTAACATAA 58.911 43.478 0.00 0.00 0.00 1.90
1202 1400 4.082026 ACAGGGGTCTACACGTAACATAAC 60.082 45.833 0.00 0.00 0.00 1.89
1231 1429 2.434359 GGAAGAAGACGGCCGTGG 60.434 66.667 39.65 4.62 0.00 4.94
1566 1764 2.262915 CTCTCGCACCTGACCACC 59.737 66.667 0.00 0.00 0.00 4.61
1647 1845 0.171679 TCAGGTACGTGCACCATACG 59.828 55.000 12.15 0.95 46.31 3.06
1649 1847 2.169146 GGTACGTGCACCATACGGC 61.169 63.158 12.15 0.00 45.24 5.68
1652 1850 1.596895 TACGTGCACCATACGGCTGA 61.597 55.000 12.15 0.00 45.24 4.26
1716 1914 5.365605 TGATGTATCCTTCCGAACATACCTT 59.634 40.000 0.00 0.00 32.87 3.50
1848 2046 3.849951 ATAGTGGTCTGCCGGCCG 61.850 66.667 26.77 21.04 37.67 6.13
2128 2332 2.548480 AGCAAGCTACTTTTGGTCGTTC 59.452 45.455 0.00 0.00 31.10 3.95
2152 2356 1.135859 GCGTGAAATCACTTGAGCCAG 60.136 52.381 11.45 0.00 44.34 4.85
2160 2364 1.035139 CACTTGAGCCAGCAGGTTTT 58.965 50.000 0.00 0.00 37.19 2.43
2198 2402 0.567687 TCTGGATCTAGGGATGGCCA 59.432 55.000 8.56 8.56 35.15 5.36
2352 2556 1.434696 GTGGCATCCCAAAGCATCG 59.565 57.895 0.00 0.00 44.33 3.84
2353 2557 1.753848 TGGCATCCCAAAGCATCGG 60.754 57.895 0.00 0.00 38.46 4.18
2399 2603 2.681976 GCAAGATGGAGTGCCTGTACAT 60.682 50.000 0.00 0.00 34.58 2.29
2459 2663 3.651423 AGTTGGTTTGTTCCCTAGCTAGT 59.349 43.478 19.31 0.00 0.00 2.57
2502 2706 3.407698 AGTGCGATCAACCATGTAAACA 58.592 40.909 0.00 0.00 0.00 2.83
2543 2747 1.153628 GGCCTGGTGCGTACTACAG 60.154 63.158 3.01 3.30 42.61 2.74
2544 2748 1.590147 GCCTGGTGCGTACTACAGT 59.410 57.895 3.01 0.00 0.00 3.55
2545 2749 0.458025 GCCTGGTGCGTACTACAGTC 60.458 60.000 3.01 0.00 0.00 3.51
2546 2750 1.174783 CCTGGTGCGTACTACAGTCT 58.825 55.000 3.01 0.00 0.00 3.24
2547 2751 2.362736 CCTGGTGCGTACTACAGTCTA 58.637 52.381 3.01 0.00 0.00 2.59
2548 2752 2.097142 CCTGGTGCGTACTACAGTCTAC 59.903 54.545 3.01 0.00 0.00 2.59
2549 2753 2.745821 CTGGTGCGTACTACAGTCTACA 59.254 50.000 3.01 0.00 0.00 2.74
2553 2775 3.005554 TGCGTACTACAGTCTACAGGTC 58.994 50.000 0.00 0.00 0.00 3.85
2689 2998 6.849085 TCATTAATTAAGTGGCACCATGTT 57.151 33.333 15.27 4.44 0.00 2.71
2733 3042 4.394712 CCGGCCCAGAACGAAGCT 62.395 66.667 0.00 0.00 0.00 3.74
2765 3074 3.438781 TGCGCTTCTTTATTCGACCAAAT 59.561 39.130 9.73 0.00 0.00 2.32
2789 3098 6.665474 TTCGCTAAAAAGTGACTAACAACA 57.335 33.333 0.00 0.00 0.00 3.33
2826 3135 7.885399 ACCTCACAAGCTTAACTAAGAATTCAT 59.115 33.333 8.44 0.00 35.33 2.57
2854 3163 2.527100 CCGAAGACGCGAAGTAATCTT 58.473 47.619 15.93 10.53 38.29 2.40
2869 3178 4.572389 AGTAATCTTGCGGATCAACATCAC 59.428 41.667 0.00 0.00 32.76 3.06
2895 3204 1.219935 GACCGGTCGCCAATACCTT 59.780 57.895 20.85 0.00 34.66 3.50
2909 3218 6.477688 CGCCAATACCTTCTTCGATTAGTTTA 59.522 38.462 0.00 0.00 0.00 2.01
2910 3219 7.170998 CGCCAATACCTTCTTCGATTAGTTTAT 59.829 37.037 0.00 0.00 0.00 1.40
2927 3237 4.219944 AGTTTATCACTTCTACGCAGTCCA 59.780 41.667 0.00 0.00 34.69 4.02
2968 3278 3.680490 CTCAGACCAGTGAGTAGTCAGA 58.320 50.000 0.00 0.00 39.39 3.27
3070 3383 1.578897 TTCCATGTTCATCCCGGAGA 58.421 50.000 0.73 0.00 0.00 3.71
3087 3400 1.001641 GAACCATGCCAGCTCCTGT 60.002 57.895 0.00 0.00 0.00 4.00
3105 3418 0.391263 GTAGTTCCGTCCTTGGCAGG 60.391 60.000 0.00 0.00 42.50 4.85
3117 3430 2.002018 TTGGCAGGAAAGGACCCGTT 62.002 55.000 0.00 0.00 0.00 4.44
3214 3527 7.023575 GTGATAACAATTTCCTGCTGTACAAG 58.976 38.462 0.00 0.00 0.00 3.16
3221 3534 1.746615 CTGCTGTACAAGGGCGCAT 60.747 57.895 10.83 0.00 0.00 4.73
3252 3565 8.689061 CATTTTTCCTTTGATGTGATCTCCATA 58.311 33.333 0.00 0.00 0.00 2.74
3336 3649 2.184167 CCAGCGGTGGTCGTTTGTT 61.184 57.895 25.51 0.00 39.30 2.83
3352 3665 4.319477 CGTTTGTTGTGGACGATCTCATTT 60.319 41.667 0.00 0.00 38.99 2.32
3368 3681 3.093814 TCATTTCTCACATGCCAGCAAT 58.906 40.909 0.00 0.00 0.00 3.56
3423 3736 2.049156 TGACAAGTCCGCGAGCAG 60.049 61.111 8.23 0.00 0.00 4.24
3460 3773 1.742880 CCCAGTGTGCATGACTCGG 60.743 63.158 0.00 0.00 0.00 4.63
3502 3815 3.282157 CGCGCCATAGCTTGCCAT 61.282 61.111 0.00 0.00 36.60 4.40
3506 3819 1.882912 CGCCATAGCTTGCCATAAGA 58.117 50.000 0.00 0.00 36.60 2.10
3576 3889 2.426522 GGTAGCACACACATGACACAT 58.573 47.619 0.00 0.00 0.00 3.21
3577 3890 2.416547 GGTAGCACACACATGACACATC 59.583 50.000 0.00 0.00 0.00 3.06
3578 3891 2.556144 AGCACACACATGACACATCT 57.444 45.000 0.00 0.00 0.00 2.90
3579 3892 3.683365 AGCACACACATGACACATCTA 57.317 42.857 0.00 0.00 0.00 1.98
3580 3893 3.593096 AGCACACACATGACACATCTAG 58.407 45.455 0.00 0.00 0.00 2.43
3581 3894 3.007290 AGCACACACATGACACATCTAGT 59.993 43.478 0.00 0.00 0.00 2.57
3582 3895 3.748048 GCACACACATGACACATCTAGTT 59.252 43.478 0.00 0.00 0.00 2.24
3583 3896 4.929211 GCACACACATGACACATCTAGTTA 59.071 41.667 0.00 0.00 0.00 2.24
3584 3897 5.582269 GCACACACATGACACATCTAGTTAT 59.418 40.000 0.00 0.00 0.00 1.89
3585 3898 6.456047 GCACACACATGACACATCTAGTTATG 60.456 42.308 0.00 0.00 38.49 1.90
3586 3899 6.591448 CACACACATGACACATCTAGTTATGT 59.409 38.462 0.00 0.00 44.05 2.29
3587 3900 6.813649 ACACACATGACACATCTAGTTATGTC 59.186 38.462 0.00 5.44 42.17 3.06
3593 3906 7.410120 TGACACATCTAGTTATGTCACATCT 57.590 36.000 10.23 0.00 44.88 2.90
3594 3907 8.519799 TGACACATCTAGTTATGTCACATCTA 57.480 34.615 10.23 0.00 44.88 1.98
3595 3908 8.966868 TGACACATCTAGTTATGTCACATCTAA 58.033 33.333 10.23 0.00 44.88 2.10
3596 3909 9.803315 GACACATCTAGTTATGTCACATCTAAA 57.197 33.333 7.24 0.00 40.95 1.85
3597 3910 9.587772 ACACATCTAGTTATGTCACATCTAAAC 57.412 33.333 0.00 0.00 38.01 2.01
3598 3911 9.809096 CACATCTAGTTATGTCACATCTAAACT 57.191 33.333 9.01 9.01 38.01 2.66
3599 3912 9.809096 ACATCTAGTTATGTCACATCTAAACTG 57.191 33.333 12.82 5.38 35.08 3.16
3614 3927 8.994429 CATCTAAACTGATGTCTACTCTGTTT 57.006 34.615 11.33 11.33 43.11 2.83
3615 3928 8.867935 CATCTAAACTGATGTCTACTCTGTTTG 58.132 37.037 14.59 7.92 41.71 2.93
3616 3929 7.952671 TCTAAACTGATGTCTACTCTGTTTGT 58.047 34.615 14.59 0.00 41.71 2.83
3617 3930 6.851222 AAACTGATGTCTACTCTGTTTGTG 57.149 37.500 7.29 0.00 40.80 3.33
3618 3931 5.791336 ACTGATGTCTACTCTGTTTGTGA 57.209 39.130 0.00 0.00 0.00 3.58
3619 3932 6.352016 ACTGATGTCTACTCTGTTTGTGAT 57.648 37.500 0.00 0.00 0.00 3.06
3620 3933 6.393990 ACTGATGTCTACTCTGTTTGTGATC 58.606 40.000 0.00 0.00 0.00 2.92
3621 3934 6.210385 ACTGATGTCTACTCTGTTTGTGATCT 59.790 38.462 0.00 0.00 0.00 2.75
3622 3935 7.394641 ACTGATGTCTACTCTGTTTGTGATCTA 59.605 37.037 0.00 0.00 0.00 1.98
3623 3936 8.298729 TGATGTCTACTCTGTTTGTGATCTAT 57.701 34.615 0.00 0.00 0.00 1.98
3624 3937 8.753133 TGATGTCTACTCTGTTTGTGATCTATT 58.247 33.333 0.00 0.00 0.00 1.73
3625 3938 9.593134 GATGTCTACTCTGTTTGTGATCTATTT 57.407 33.333 0.00 0.00 0.00 1.40
3626 3939 9.950496 ATGTCTACTCTGTTTGTGATCTATTTT 57.050 29.630 0.00 0.00 0.00 1.82
3627 3940 9.778741 TGTCTACTCTGTTTGTGATCTATTTTT 57.221 29.630 0.00 0.00 0.00 1.94
3664 3977 9.518906 TTCTTGTTGCTGCATTATATATTTGTG 57.481 29.630 1.84 0.00 0.00 3.33
3665 3978 8.901793 TCTTGTTGCTGCATTATATATTTGTGA 58.098 29.630 1.84 0.00 0.00 3.58
3666 3979 9.177304 CTTGTTGCTGCATTATATATTTGTGAG 57.823 33.333 1.84 0.00 0.00 3.51
3667 3980 8.449251 TGTTGCTGCATTATATATTTGTGAGA 57.551 30.769 1.84 0.00 0.00 3.27
3668 3981 8.562052 TGTTGCTGCATTATATATTTGTGAGAG 58.438 33.333 1.84 0.00 0.00 3.20
3669 3982 7.137490 TGCTGCATTATATATTTGTGAGAGC 57.863 36.000 0.00 0.00 0.00 4.09
3670 3983 6.938596 TGCTGCATTATATATTTGTGAGAGCT 59.061 34.615 0.00 0.00 0.00 4.09
3671 3984 7.446319 TGCTGCATTATATATTTGTGAGAGCTT 59.554 33.333 0.00 0.00 0.00 3.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 0.693049 TTCCCAAGAACCTGAGCTCC 59.307 55.000 12.15 0.00 0.00 4.70
3 4 1.005215 CCATTCCCAAGAACCTGAGCT 59.995 52.381 0.00 0.00 33.97 4.09
4 5 1.004745 TCCATTCCCAAGAACCTGAGC 59.995 52.381 0.00 0.00 33.97 4.26
5 6 2.573462 TCTCCATTCCCAAGAACCTGAG 59.427 50.000 0.00 0.00 33.97 3.35
7 8 2.716217 GTCTCCATTCCCAAGAACCTG 58.284 52.381 0.00 0.00 33.97 4.00
8 9 1.279271 CGTCTCCATTCCCAAGAACCT 59.721 52.381 0.00 0.00 33.97 3.50
9 10 1.739067 CGTCTCCATTCCCAAGAACC 58.261 55.000 0.00 0.00 33.97 3.62
10 11 1.087501 GCGTCTCCATTCCCAAGAAC 58.912 55.000 0.00 0.00 33.97 3.01
11 12 0.690192 TGCGTCTCCATTCCCAAGAA 59.310 50.000 0.00 0.00 36.15 2.52
12 13 0.036388 GTGCGTCTCCATTCCCAAGA 60.036 55.000 0.00 0.00 0.00 3.02
13 14 1.026718 GGTGCGTCTCCATTCCCAAG 61.027 60.000 0.00 0.00 0.00 3.61
14 15 1.002624 GGTGCGTCTCCATTCCCAA 60.003 57.895 0.00 0.00 0.00 4.12
15 16 0.616395 TAGGTGCGTCTCCATTCCCA 60.616 55.000 1.81 0.00 0.00 4.37
16 17 0.179081 GTAGGTGCGTCTCCATTCCC 60.179 60.000 1.81 0.00 0.00 3.97
17 18 0.535335 TGTAGGTGCGTCTCCATTCC 59.465 55.000 1.81 0.00 0.00 3.01
18 19 1.471676 CCTGTAGGTGCGTCTCCATTC 60.472 57.143 0.00 0.00 0.00 2.67
19 20 0.537188 CCTGTAGGTGCGTCTCCATT 59.463 55.000 0.00 0.00 0.00 3.16
20 21 1.330655 CCCTGTAGGTGCGTCTCCAT 61.331 60.000 0.00 0.00 0.00 3.41
21 22 1.982395 CCCTGTAGGTGCGTCTCCA 60.982 63.158 0.00 0.00 0.00 3.86
22 23 2.722201 CCCCTGTAGGTGCGTCTCC 61.722 68.421 0.00 0.00 0.00 3.71
23 24 2.722201 CCCCCTGTAGGTGCGTCTC 61.722 68.421 0.00 0.00 0.00 3.36
24 25 2.683933 CCCCCTGTAGGTGCGTCT 60.684 66.667 0.00 0.00 0.00 4.18
25 26 4.468689 GCCCCCTGTAGGTGCGTC 62.469 72.222 0.00 0.00 0.00 5.19
27 28 4.473520 CAGCCCCCTGTAGGTGCG 62.474 72.222 0.00 0.00 36.52 5.34
28 29 4.115199 CCAGCCCCCTGTAGGTGC 62.115 72.222 0.00 0.00 37.38 5.01
29 30 4.115199 GCCAGCCCCCTGTAGGTG 62.115 72.222 0.00 0.00 37.38 4.00
32 33 3.164269 ATCGCCAGCCCCCTGTAG 61.164 66.667 0.00 0.00 37.38 2.74
33 34 3.479203 CATCGCCAGCCCCCTGTA 61.479 66.667 0.00 0.00 37.38 2.74
94 95 1.299014 GGCTGCTCTCGTCGATGAG 60.299 63.158 25.74 25.74 37.33 2.90
95 96 1.719725 GAGGCTGCTCTCGTCGATGA 61.720 60.000 7.21 7.21 0.00 2.92
96 97 1.299014 GAGGCTGCTCTCGTCGATG 60.299 63.158 0.00 0.00 0.00 3.84
97 98 2.485795 GGAGGCTGCTCTCGTCGAT 61.486 63.158 0.00 0.00 34.74 3.59
98 99 3.134792 GGAGGCTGCTCTCGTCGA 61.135 66.667 0.00 0.00 34.74 4.20
99 100 4.200283 GGGAGGCTGCTCTCGTCG 62.200 72.222 5.84 0.00 34.74 5.12
100 101 3.844090 GGGGAGGCTGCTCTCGTC 61.844 72.222 5.84 1.46 34.74 4.20
115 116 0.900182 GCAGAAAAGGTGGAAGGGGG 60.900 60.000 0.00 0.00 0.00 5.40
116 117 0.900182 GGCAGAAAAGGTGGAAGGGG 60.900 60.000 0.00 0.00 0.00 4.79
117 118 1.244019 CGGCAGAAAAGGTGGAAGGG 61.244 60.000 0.00 0.00 0.00 3.95
118 119 1.866853 GCGGCAGAAAAGGTGGAAGG 61.867 60.000 0.00 0.00 0.00 3.46
119 120 0.890996 AGCGGCAGAAAAGGTGGAAG 60.891 55.000 1.45 0.00 0.00 3.46
120 121 1.150536 AGCGGCAGAAAAGGTGGAA 59.849 52.632 1.45 0.00 0.00 3.53
121 122 1.600636 CAGCGGCAGAAAAGGTGGA 60.601 57.895 1.45 0.00 0.00 4.02
122 123 2.629656 CCAGCGGCAGAAAAGGTGG 61.630 63.158 1.45 0.00 45.30 4.61
123 124 0.962356 ATCCAGCGGCAGAAAAGGTG 60.962 55.000 1.45 0.00 0.00 4.00
124 125 0.618458 TATCCAGCGGCAGAAAAGGT 59.382 50.000 1.45 0.00 0.00 3.50
125 126 1.672881 CTTATCCAGCGGCAGAAAAGG 59.327 52.381 1.45 0.00 0.00 3.11
126 127 2.632377 TCTTATCCAGCGGCAGAAAAG 58.368 47.619 1.45 0.00 0.00 2.27
127 128 2.779755 TCTTATCCAGCGGCAGAAAA 57.220 45.000 1.45 0.00 0.00 2.29
128 129 2.170397 TCATCTTATCCAGCGGCAGAAA 59.830 45.455 1.45 0.00 0.00 2.52
129 130 1.762370 TCATCTTATCCAGCGGCAGAA 59.238 47.619 1.45 0.00 0.00 3.02
130 131 1.413118 TCATCTTATCCAGCGGCAGA 58.587 50.000 1.45 0.00 0.00 4.26
131 132 1.869767 GTTCATCTTATCCAGCGGCAG 59.130 52.381 1.45 0.00 0.00 4.85
132 133 1.209261 TGTTCATCTTATCCAGCGGCA 59.791 47.619 1.45 0.00 0.00 5.69
133 134 1.953559 TGTTCATCTTATCCAGCGGC 58.046 50.000 0.00 0.00 0.00 6.53
134 135 3.313526 CCTTTGTTCATCTTATCCAGCGG 59.686 47.826 0.00 0.00 0.00 5.52
135 136 4.191544 TCCTTTGTTCATCTTATCCAGCG 58.808 43.478 0.00 0.00 0.00 5.18
136 137 4.036144 GCTCCTTTGTTCATCTTATCCAGC 59.964 45.833 0.00 0.00 0.00 4.85
137 138 4.272018 CGCTCCTTTGTTCATCTTATCCAG 59.728 45.833 0.00 0.00 0.00 3.86
138 139 4.191544 CGCTCCTTTGTTCATCTTATCCA 58.808 43.478 0.00 0.00 0.00 3.41
139 140 3.002759 GCGCTCCTTTGTTCATCTTATCC 59.997 47.826 0.00 0.00 0.00 2.59
140 141 3.302740 CGCGCTCCTTTGTTCATCTTATC 60.303 47.826 5.56 0.00 0.00 1.75
141 142 2.609459 CGCGCTCCTTTGTTCATCTTAT 59.391 45.455 5.56 0.00 0.00 1.73
142 143 1.999735 CGCGCTCCTTTGTTCATCTTA 59.000 47.619 5.56 0.00 0.00 2.10
143 144 0.798776 CGCGCTCCTTTGTTCATCTT 59.201 50.000 5.56 0.00 0.00 2.40
144 145 1.021390 CCGCGCTCCTTTGTTCATCT 61.021 55.000 5.56 0.00 0.00 2.90
145 146 1.425428 CCGCGCTCCTTTGTTCATC 59.575 57.895 5.56 0.00 0.00 2.92
146 147 2.040544 CCCGCGCTCCTTTGTTCAT 61.041 57.895 5.56 0.00 0.00 2.57
147 148 2.668212 CCCGCGCTCCTTTGTTCA 60.668 61.111 5.56 0.00 0.00 3.18
148 149 2.668550 ACCCGCGCTCCTTTGTTC 60.669 61.111 5.56 0.00 0.00 3.18
149 150 2.951475 TTCACCCGCGCTCCTTTGTT 62.951 55.000 5.56 0.00 0.00 2.83
150 151 2.951475 TTTCACCCGCGCTCCTTTGT 62.951 55.000 5.56 0.00 0.00 2.83
151 152 1.586154 ATTTCACCCGCGCTCCTTTG 61.586 55.000 5.56 0.00 0.00 2.77
152 153 0.893727 AATTTCACCCGCGCTCCTTT 60.894 50.000 5.56 0.00 0.00 3.11
153 154 1.303317 AATTTCACCCGCGCTCCTT 60.303 52.632 5.56 0.00 0.00 3.36
154 155 2.040544 CAATTTCACCCGCGCTCCT 61.041 57.895 5.56 0.00 0.00 3.69
155 156 1.862602 AACAATTTCACCCGCGCTCC 61.863 55.000 5.56 0.00 0.00 4.70
156 157 0.800012 TAACAATTTCACCCGCGCTC 59.200 50.000 5.56 0.00 0.00 5.03
157 158 0.519961 GTAACAATTTCACCCGCGCT 59.480 50.000 5.56 0.00 0.00 5.92
158 159 0.238817 TGTAACAATTTCACCCGCGC 59.761 50.000 0.00 0.00 0.00 6.86
159 160 2.690173 TTGTAACAATTTCACCCGCG 57.310 45.000 0.00 0.00 0.00 6.46
160 161 4.376920 GCATTTTGTAACAATTTCACCCGC 60.377 41.667 0.00 0.00 0.00 6.13
161 162 4.747108 TGCATTTTGTAACAATTTCACCCG 59.253 37.500 0.00 0.00 0.00 5.28
162 163 5.179182 CCTGCATTTTGTAACAATTTCACCC 59.821 40.000 0.00 0.00 0.00 4.61
163 164 5.179182 CCCTGCATTTTGTAACAATTTCACC 59.821 40.000 0.00 0.00 0.00 4.02
164 165 5.988561 TCCCTGCATTTTGTAACAATTTCAC 59.011 36.000 0.00 0.00 0.00 3.18
165 166 6.166984 TCCCTGCATTTTGTAACAATTTCA 57.833 33.333 0.00 0.00 0.00 2.69
166 167 7.671495 AATCCCTGCATTTTGTAACAATTTC 57.329 32.000 0.00 0.00 0.00 2.17
167 168 9.737844 ATTAATCCCTGCATTTTGTAACAATTT 57.262 25.926 0.00 0.00 0.00 1.82
168 169 9.737844 AATTAATCCCTGCATTTTGTAACAATT 57.262 25.926 0.00 0.00 0.00 2.32
169 170 9.737844 AAATTAATCCCTGCATTTTGTAACAAT 57.262 25.926 0.00 0.00 0.00 2.71
170 171 8.997323 CAAATTAATCCCTGCATTTTGTAACAA 58.003 29.630 0.00 0.00 0.00 2.83
171 172 7.118971 GCAAATTAATCCCTGCATTTTGTAACA 59.881 33.333 10.62 0.00 34.87 2.41
172 173 7.118971 TGCAAATTAATCCCTGCATTTTGTAAC 59.881 33.333 13.09 0.00 39.77 2.50
173 174 7.164122 TGCAAATTAATCCCTGCATTTTGTAA 58.836 30.769 13.09 0.00 39.77 2.41
174 175 6.705302 TGCAAATTAATCCCTGCATTTTGTA 58.295 32.000 13.09 0.00 39.77 2.41
175 176 5.558818 TGCAAATTAATCCCTGCATTTTGT 58.441 33.333 13.09 0.00 39.77 2.83
176 177 6.497785 TTGCAAATTAATCCCTGCATTTTG 57.502 33.333 16.22 4.88 43.83 2.44
177 178 7.521871 TTTTGCAAATTAATCCCTGCATTTT 57.478 28.000 13.65 0.00 43.83 1.82
178 179 7.014038 TGTTTTTGCAAATTAATCCCTGCATTT 59.986 29.630 13.65 0.00 43.83 2.32
179 180 6.489361 TGTTTTTGCAAATTAATCCCTGCATT 59.511 30.769 13.65 0.00 43.83 3.56
180 181 6.002704 TGTTTTTGCAAATTAATCCCTGCAT 58.997 32.000 13.65 0.00 43.83 3.96
181 182 5.238214 GTGTTTTTGCAAATTAATCCCTGCA 59.762 36.000 13.65 13.09 42.79 4.41
182 183 5.614449 CGTGTTTTTGCAAATTAATCCCTGC 60.614 40.000 13.65 9.19 35.32 4.85
183 184 5.614449 GCGTGTTTTTGCAAATTAATCCCTG 60.614 40.000 13.65 0.00 0.00 4.45
184 185 4.450757 GCGTGTTTTTGCAAATTAATCCCT 59.549 37.500 13.65 0.00 0.00 4.20
185 186 4.377943 GGCGTGTTTTTGCAAATTAATCCC 60.378 41.667 13.65 6.67 0.00 3.85
186 187 4.377943 GGGCGTGTTTTTGCAAATTAATCC 60.378 41.667 13.65 9.98 0.00 3.01
187 188 4.450757 AGGGCGTGTTTTTGCAAATTAATC 59.549 37.500 13.65 0.00 0.00 1.75
188 189 4.213059 CAGGGCGTGTTTTTGCAAATTAAT 59.787 37.500 13.65 0.00 0.00 1.40
189 190 3.557595 CAGGGCGTGTTTTTGCAAATTAA 59.442 39.130 13.65 2.09 0.00 1.40
190 191 3.126831 CAGGGCGTGTTTTTGCAAATTA 58.873 40.909 13.65 1.32 0.00 1.40
191 192 1.939255 CAGGGCGTGTTTTTGCAAATT 59.061 42.857 13.65 0.00 0.00 1.82
192 193 1.580815 CAGGGCGTGTTTTTGCAAAT 58.419 45.000 13.65 0.00 0.00 2.32
193 194 0.460987 CCAGGGCGTGTTTTTGCAAA 60.461 50.000 8.05 8.05 0.00 3.68
194 195 1.142748 CCAGGGCGTGTTTTTGCAA 59.857 52.632 6.43 0.00 0.00 4.08
195 196 2.811101 CCAGGGCGTGTTTTTGCA 59.189 55.556 6.43 0.00 0.00 4.08
196 197 2.661537 GCCAGGGCGTGTTTTTGC 60.662 61.111 6.43 0.00 0.00 3.68
206 207 3.883549 GGAGGATGGAGCCAGGGC 61.884 72.222 0.97 0.97 42.33 5.19
207 208 3.174265 GGGAGGATGGAGCCAGGG 61.174 72.222 0.00 0.00 0.00 4.45
208 209 2.367377 TGGGAGGATGGAGCCAGG 60.367 66.667 0.00 0.00 0.00 4.45
209 210 2.914289 GTGGGAGGATGGAGCCAG 59.086 66.667 0.00 0.00 0.00 4.85
210 211 3.083349 CGTGGGAGGATGGAGCCA 61.083 66.667 0.00 0.00 0.00 4.75
211 212 4.554036 GCGTGGGAGGATGGAGCC 62.554 72.222 0.00 0.00 0.00 4.70
212 213 4.899239 CGCGTGGGAGGATGGAGC 62.899 72.222 0.00 0.00 0.00 4.70
213 214 3.144120 CTCGCGTGGGAGGATGGAG 62.144 68.421 5.77 0.00 0.00 3.86
214 215 3.147595 CTCGCGTGGGAGGATGGA 61.148 66.667 5.77 0.00 0.00 3.41
243 244 2.591715 ATTATGTCCTGCGCCGGC 60.592 61.111 19.07 19.07 40.52 6.13
244 245 2.253758 CCATTATGTCCTGCGCCGG 61.254 63.158 12.26 12.26 0.00 6.13
245 246 0.603707 ATCCATTATGTCCTGCGCCG 60.604 55.000 4.18 0.00 0.00 6.46
246 247 2.472695 TATCCATTATGTCCTGCGCC 57.527 50.000 4.18 0.00 0.00 6.53
247 248 3.433615 GTCTTATCCATTATGTCCTGCGC 59.566 47.826 0.00 0.00 0.00 6.09
248 249 4.887748 AGTCTTATCCATTATGTCCTGCG 58.112 43.478 0.00 0.00 0.00 5.18
249 250 8.972127 TCTATAGTCTTATCCATTATGTCCTGC 58.028 37.037 0.00 0.00 0.00 4.85
258 259 9.640952 GCTATCCTCTCTATAGTCTTATCCATT 57.359 37.037 0.00 0.00 30.91 3.16
259 260 7.936847 CGCTATCCTCTCTATAGTCTTATCCAT 59.063 40.741 0.00 0.00 30.91 3.41
260 261 7.276658 CGCTATCCTCTCTATAGTCTTATCCA 58.723 42.308 0.00 0.00 30.91 3.41
261 262 6.708949 CCGCTATCCTCTCTATAGTCTTATCC 59.291 46.154 0.00 0.00 30.91 2.59
262 263 6.708949 CCCGCTATCCTCTCTATAGTCTTATC 59.291 46.154 0.00 0.00 30.91 1.75
263 264 6.159046 ACCCGCTATCCTCTCTATAGTCTTAT 59.841 42.308 0.00 0.00 30.91 1.73
264 265 5.488203 ACCCGCTATCCTCTCTATAGTCTTA 59.512 44.000 0.00 0.00 30.91 2.10
265 266 4.290196 ACCCGCTATCCTCTCTATAGTCTT 59.710 45.833 0.00 0.00 30.91 3.01
266 267 3.847780 ACCCGCTATCCTCTCTATAGTCT 59.152 47.826 0.00 0.00 30.91 3.24
267 268 4.224991 ACCCGCTATCCTCTCTATAGTC 57.775 50.000 0.00 0.00 30.91 2.59
268 269 4.043059 TCAACCCGCTATCCTCTCTATAGT 59.957 45.833 0.00 0.00 30.91 2.12
269 270 4.590918 TCAACCCGCTATCCTCTCTATAG 58.409 47.826 0.00 0.00 0.00 1.31
270 271 4.652679 TCAACCCGCTATCCTCTCTATA 57.347 45.455 0.00 0.00 0.00 1.31
271 272 3.527507 TCAACCCGCTATCCTCTCTAT 57.472 47.619 0.00 0.00 0.00 1.98
272 273 3.308035 TTCAACCCGCTATCCTCTCTA 57.692 47.619 0.00 0.00 0.00 2.43
273 274 2.160721 TTCAACCCGCTATCCTCTCT 57.839 50.000 0.00 0.00 0.00 3.10
274 275 3.181465 TGAATTCAACCCGCTATCCTCTC 60.181 47.826 5.45 0.00 0.00 3.20
275 276 2.771943 TGAATTCAACCCGCTATCCTCT 59.228 45.455 5.45 0.00 0.00 3.69
276 277 3.194005 TGAATTCAACCCGCTATCCTC 57.806 47.619 5.45 0.00 0.00 3.71
277 278 3.644966 TTGAATTCAACCCGCTATCCT 57.355 42.857 16.91 0.00 0.00 3.24
278 279 4.918810 ATTTGAATTCAACCCGCTATCC 57.081 40.909 20.35 0.00 35.28 2.59
279 280 7.027778 AGTTATTTGAATTCAACCCGCTATC 57.972 36.000 20.35 6.39 35.28 2.08
280 281 8.691661 ATAGTTATTTGAATTCAACCCGCTAT 57.308 30.769 20.35 19.30 35.28 2.97
281 282 9.268268 CTATAGTTATTTGAATTCAACCCGCTA 57.732 33.333 20.35 18.17 35.28 4.26
282 283 7.255139 GCTATAGTTATTTGAATTCAACCCGCT 60.255 37.037 20.35 16.84 35.28 5.52
283 284 6.856426 GCTATAGTTATTTGAATTCAACCCGC 59.144 38.462 20.35 11.17 35.28 6.13
284 285 7.069569 CGCTATAGTTATTTGAATTCAACCCG 58.930 38.462 20.35 7.32 35.28 5.28
285 286 6.856426 GCGCTATAGTTATTTGAATTCAACCC 59.144 38.462 20.35 8.57 35.28 4.11
286 287 6.856426 GGCGCTATAGTTATTTGAATTCAACC 59.144 38.462 20.35 9.68 35.28 3.77
287 288 7.639945 AGGCGCTATAGTTATTTGAATTCAAC 58.360 34.615 20.35 9.95 35.28 3.18
288 289 7.801716 AGGCGCTATAGTTATTTGAATTCAA 57.198 32.000 16.91 16.91 0.00 2.69
289 290 7.801716 AAGGCGCTATAGTTATTTGAATTCA 57.198 32.000 7.64 3.38 0.00 2.57
290 291 9.516314 AAAAAGGCGCTATAGTTATTTGAATTC 57.484 29.630 7.64 0.00 0.00 2.17
315 316 9.843334 AGTAGAAAAACGTTTCACATTTACAAA 57.157 25.926 15.01 0.00 44.82 2.83
317 318 9.919348 GTAGTAGAAAAACGTTTCACATTTACA 57.081 29.630 15.01 0.00 44.82 2.41
318 319 9.084873 CGTAGTAGAAAAACGTTTCACATTTAC 57.915 33.333 15.01 11.91 44.82 2.01
319 320 7.793427 GCGTAGTAGAAAAACGTTTCACATTTA 59.207 33.333 15.01 1.48 44.82 1.40
320 321 6.630045 GCGTAGTAGAAAAACGTTTCACATTT 59.370 34.615 15.01 4.16 44.82 2.32
321 322 6.131389 GCGTAGTAGAAAAACGTTTCACATT 58.869 36.000 15.01 4.57 44.82 2.71
322 323 5.333568 GGCGTAGTAGAAAAACGTTTCACAT 60.334 40.000 15.01 3.78 44.82 3.21
323 324 4.025813 GGCGTAGTAGAAAAACGTTTCACA 60.026 41.667 15.01 0.00 44.82 3.58
324 325 4.025813 TGGCGTAGTAGAAAAACGTTTCAC 60.026 41.667 15.01 11.20 44.82 3.18
325 326 4.025813 GTGGCGTAGTAGAAAAACGTTTCA 60.026 41.667 15.01 0.16 44.82 2.69
326 327 4.209911 AGTGGCGTAGTAGAAAAACGTTTC 59.790 41.667 15.01 2.55 43.05 2.78
327 328 4.122046 AGTGGCGTAGTAGAAAAACGTTT 58.878 39.130 7.96 7.96 38.81 3.60
328 329 3.721035 AGTGGCGTAGTAGAAAAACGTT 58.279 40.909 0.00 0.00 38.81 3.99
329 330 3.375782 AGTGGCGTAGTAGAAAAACGT 57.624 42.857 0.00 0.00 38.81 3.99
330 331 5.827568 TTTAGTGGCGTAGTAGAAAAACG 57.172 39.130 0.00 0.00 39.55 3.60
331 332 6.947258 TGTTTTAGTGGCGTAGTAGAAAAAC 58.053 36.000 0.00 0.00 36.56 2.43
332 333 6.203338 CCTGTTTTAGTGGCGTAGTAGAAAAA 59.797 38.462 0.00 0.00 0.00 1.94
333 334 5.697633 CCTGTTTTAGTGGCGTAGTAGAAAA 59.302 40.000 0.00 0.00 0.00 2.29
334 335 5.232463 CCTGTTTTAGTGGCGTAGTAGAAA 58.768 41.667 0.00 0.00 0.00 2.52
335 336 4.322198 CCCTGTTTTAGTGGCGTAGTAGAA 60.322 45.833 0.00 0.00 0.00 2.10
336 337 3.194116 CCCTGTTTTAGTGGCGTAGTAGA 59.806 47.826 0.00 0.00 0.00 2.59
337 338 3.194116 TCCCTGTTTTAGTGGCGTAGTAG 59.806 47.826 0.00 0.00 0.00 2.57
338 339 3.164268 TCCCTGTTTTAGTGGCGTAGTA 58.836 45.455 0.00 0.00 0.00 1.82
339 340 1.972795 TCCCTGTTTTAGTGGCGTAGT 59.027 47.619 0.00 0.00 0.00 2.73
340 341 2.754946 TCCCTGTTTTAGTGGCGTAG 57.245 50.000 0.00 0.00 0.00 3.51
341 342 3.340034 CAATCCCTGTTTTAGTGGCGTA 58.660 45.455 0.00 0.00 0.00 4.42
342 343 2.159382 CAATCCCTGTTTTAGTGGCGT 58.841 47.619 0.00 0.00 0.00 5.68
343 344 1.135402 GCAATCCCTGTTTTAGTGGCG 60.135 52.381 0.00 0.00 0.00 5.69
344 345 1.135402 CGCAATCCCTGTTTTAGTGGC 60.135 52.381 0.00 0.00 0.00 5.01
345 346 1.472480 CCGCAATCCCTGTTTTAGTGG 59.528 52.381 0.00 0.00 0.00 4.00
346 347 1.472480 CCCGCAATCCCTGTTTTAGTG 59.528 52.381 0.00 0.00 0.00 2.74
347 348 1.074889 ACCCGCAATCCCTGTTTTAGT 59.925 47.619 0.00 0.00 0.00 2.24
348 349 1.834188 ACCCGCAATCCCTGTTTTAG 58.166 50.000 0.00 0.00 0.00 1.85
349 350 1.889829 CAACCCGCAATCCCTGTTTTA 59.110 47.619 0.00 0.00 0.00 1.52
350 351 0.678950 CAACCCGCAATCCCTGTTTT 59.321 50.000 0.00 0.00 0.00 2.43
351 352 0.178975 TCAACCCGCAATCCCTGTTT 60.179 50.000 0.00 0.00 0.00 2.83
352 353 0.039618 ATCAACCCGCAATCCCTGTT 59.960 50.000 0.00 0.00 0.00 3.16
353 354 0.039618 AATCAACCCGCAATCCCTGT 59.960 50.000 0.00 0.00 0.00 4.00
354 355 1.134946 GAAATCAACCCGCAATCCCTG 59.865 52.381 0.00 0.00 0.00 4.45
355 356 1.272425 TGAAATCAACCCGCAATCCCT 60.272 47.619 0.00 0.00 0.00 4.20
356 357 1.181786 TGAAATCAACCCGCAATCCC 58.818 50.000 0.00 0.00 0.00 3.85
357 358 2.166254 ACATGAAATCAACCCGCAATCC 59.834 45.455 0.00 0.00 0.00 3.01
358 359 3.508744 ACATGAAATCAACCCGCAATC 57.491 42.857 0.00 0.00 0.00 2.67
359 360 5.167845 GTTTACATGAAATCAACCCGCAAT 58.832 37.500 0.00 0.00 0.00 3.56
360 361 4.551388 GTTTACATGAAATCAACCCGCAA 58.449 39.130 0.00 0.00 0.00 4.85
361 362 3.057174 GGTTTACATGAAATCAACCCGCA 60.057 43.478 0.00 0.00 32.20 5.69
362 363 3.057174 TGGTTTACATGAAATCAACCCGC 60.057 43.478 0.00 0.00 35.13 6.13
363 364 4.775058 TGGTTTACATGAAATCAACCCG 57.225 40.909 0.00 0.00 35.13 5.28
364 365 5.478407 CCTTGGTTTACATGAAATCAACCC 58.522 41.667 0.00 0.00 42.10 4.11
365 366 5.478407 CCCTTGGTTTACATGAAATCAACC 58.522 41.667 0.00 4.66 42.10 3.77
366 367 5.478407 CCCCTTGGTTTACATGAAATCAAC 58.522 41.667 0.00 0.00 42.10 3.18
367 368 4.020662 GCCCCTTGGTTTACATGAAATCAA 60.021 41.667 0.00 7.79 44.24 2.57
368 369 3.513515 GCCCCTTGGTTTACATGAAATCA 59.486 43.478 0.00 0.00 36.32 2.57
369 370 3.769300 AGCCCCTTGGTTTACATGAAATC 59.231 43.478 0.00 0.00 0.00 2.17
370 371 3.790126 AGCCCCTTGGTTTACATGAAAT 58.210 40.909 0.00 0.00 0.00 2.17
371 372 3.252554 AGCCCCTTGGTTTACATGAAA 57.747 42.857 0.00 0.00 0.00 2.69
372 373 2.990740 AGCCCCTTGGTTTACATGAA 57.009 45.000 0.00 0.00 0.00 2.57
373 374 2.990740 AAGCCCCTTGGTTTACATGA 57.009 45.000 0.00 0.00 32.63 3.07
374 375 4.350368 AAAAAGCCCCTTGGTTTACATG 57.650 40.909 0.00 0.00 43.60 3.21
392 393 6.128956 CCGTCGTCGTGGTAGTTTTATAAAAA 60.129 38.462 12.14 0.00 35.01 1.94
393 394 5.344665 CCGTCGTCGTGGTAGTTTTATAAAA 59.655 40.000 6.54 6.54 35.01 1.52
394 395 4.856487 CCGTCGTCGTGGTAGTTTTATAAA 59.144 41.667 0.71 0.00 35.01 1.40
395 396 4.155099 TCCGTCGTCGTGGTAGTTTTATAA 59.845 41.667 0.71 0.00 35.01 0.98
396 397 3.687212 TCCGTCGTCGTGGTAGTTTTATA 59.313 43.478 0.71 0.00 35.01 0.98
397 398 2.487762 TCCGTCGTCGTGGTAGTTTTAT 59.512 45.455 0.71 0.00 35.01 1.40
398 399 1.876799 TCCGTCGTCGTGGTAGTTTTA 59.123 47.619 0.71 0.00 35.01 1.52
399 400 0.667993 TCCGTCGTCGTGGTAGTTTT 59.332 50.000 0.71 0.00 35.01 2.43
400 401 0.040067 GTCCGTCGTCGTGGTAGTTT 60.040 55.000 0.71 0.00 35.01 2.66
401 402 1.576421 GTCCGTCGTCGTGGTAGTT 59.424 57.895 0.71 0.00 35.01 2.24
402 403 2.671177 CGTCCGTCGTCGTGGTAGT 61.671 63.158 0.71 0.00 35.01 2.73
403 404 2.097160 CGTCCGTCGTCGTGGTAG 59.903 66.667 0.71 0.00 35.01 3.18
404 405 2.356913 TCGTCCGTCGTCGTGGTA 60.357 61.111 0.71 0.00 40.80 3.25
405 406 4.017877 GTCGTCCGTCGTCGTGGT 62.018 66.667 0.71 0.00 40.80 4.16
406 407 4.748679 GGTCGTCCGTCGTCGTGG 62.749 72.222 0.71 0.00 40.80 4.94
407 408 3.923356 CTGGTCGTCCGTCGTCGTG 62.923 68.421 0.71 0.00 40.80 4.35
408 409 3.720193 CTGGTCGTCCGTCGTCGT 61.720 66.667 0.71 0.00 40.80 4.34
409 410 2.829577 CTTCTGGTCGTCCGTCGTCG 62.830 65.000 0.00 0.00 40.80 5.12
410 411 1.154263 CTTCTGGTCGTCCGTCGTC 60.154 63.158 0.00 0.00 40.80 4.20
411 412 2.952245 CTTCTGGTCGTCCGTCGT 59.048 61.111 0.00 0.00 40.80 4.34
412 413 2.504244 GCTTCTGGTCGTCCGTCG 60.504 66.667 0.00 0.00 41.41 5.12
413 414 1.733399 GTGCTTCTGGTCGTCCGTC 60.733 63.158 0.00 0.00 36.30 4.79
414 415 2.143594 GAGTGCTTCTGGTCGTCCGT 62.144 60.000 0.00 0.00 36.30 4.69
415 416 1.444553 GAGTGCTTCTGGTCGTCCG 60.445 63.158 0.00 0.00 36.30 4.79
416 417 1.079750 GGAGTGCTTCTGGTCGTCC 60.080 63.158 0.00 0.00 0.00 4.79
417 418 1.444553 CGGAGTGCTTCTGGTCGTC 60.445 63.158 0.00 0.00 0.00 4.20
418 419 2.201022 ACGGAGTGCTTCTGGTCGT 61.201 57.895 3.27 0.00 42.51 4.34
419 420 2.651361 ACGGAGTGCTTCTGGTCG 59.349 61.111 3.27 0.00 42.51 4.79
431 432 4.931661 TCCCTACTAATAAAGCACGGAG 57.068 45.455 0.00 0.00 0.00 4.63
432 433 5.422970 TCTTTCCCTACTAATAAAGCACGGA 59.577 40.000 0.00 0.00 0.00 4.69
433 434 5.667466 TCTTTCCCTACTAATAAAGCACGG 58.333 41.667 0.00 0.00 0.00 4.94
445 446 7.724951 GCGACCCTATATATATCTTTCCCTACT 59.275 40.741 0.00 0.00 0.00 2.57
446 447 7.308469 CGCGACCCTATATATATCTTTCCCTAC 60.308 44.444 0.00 0.00 0.00 3.18
447 448 6.713903 CGCGACCCTATATATATCTTTCCCTA 59.286 42.308 0.00 0.00 0.00 3.53
448 449 5.535406 CGCGACCCTATATATATCTTTCCCT 59.465 44.000 0.00 0.00 0.00 4.20
449 450 5.770417 CGCGACCCTATATATATCTTTCCC 58.230 45.833 0.00 0.00 0.00 3.97
450 451 5.009811 AGCGCGACCCTATATATATCTTTCC 59.990 44.000 12.10 0.00 0.00 3.13
451 452 6.074544 AGCGCGACCCTATATATATCTTTC 57.925 41.667 12.10 0.00 0.00 2.62
452 453 7.762588 ATAGCGCGACCCTATATATATCTTT 57.237 36.000 12.10 0.00 0.00 2.52
453 454 7.361031 CGAATAGCGCGACCCTATATATATCTT 60.361 40.741 12.10 0.00 0.00 2.40
454 455 6.092396 CGAATAGCGCGACCCTATATATATCT 59.908 42.308 12.10 0.00 0.00 1.98
455 456 6.128336 ACGAATAGCGCGACCCTATATATATC 60.128 42.308 12.10 0.84 46.04 1.63
456 457 5.704515 ACGAATAGCGCGACCCTATATATAT 59.295 40.000 12.10 0.00 46.04 0.86
457 458 5.059161 ACGAATAGCGCGACCCTATATATA 58.941 41.667 12.10 0.00 46.04 0.86
458 459 3.881688 ACGAATAGCGCGACCCTATATAT 59.118 43.478 12.10 0.00 46.04 0.86
459 460 3.273434 ACGAATAGCGCGACCCTATATA 58.727 45.455 12.10 0.00 46.04 0.86
460 461 2.089980 ACGAATAGCGCGACCCTATAT 58.910 47.619 12.10 0.00 46.04 0.86
461 462 1.466167 GACGAATAGCGCGACCCTATA 59.534 52.381 12.10 0.00 46.04 1.31
462 463 0.240411 GACGAATAGCGCGACCCTAT 59.760 55.000 12.10 4.35 46.04 2.57
463 464 1.096967 TGACGAATAGCGCGACCCTA 61.097 55.000 12.10 1.47 46.04 3.53
464 465 1.735376 ATGACGAATAGCGCGACCCT 61.735 55.000 12.10 0.00 46.04 4.34
465 466 1.276145 GATGACGAATAGCGCGACCC 61.276 60.000 12.10 0.00 46.04 4.46
466 467 0.317938 AGATGACGAATAGCGCGACC 60.318 55.000 12.10 0.00 46.04 4.79
467 468 0.772926 CAGATGACGAATAGCGCGAC 59.227 55.000 12.10 0.04 46.04 5.19
468 469 0.317854 CCAGATGACGAATAGCGCGA 60.318 55.000 12.10 0.00 46.04 5.87
469 470 1.278172 CCCAGATGACGAATAGCGCG 61.278 60.000 0.00 0.00 46.04 6.86
470 471 0.249489 ACCCAGATGACGAATAGCGC 60.249 55.000 0.00 0.00 46.04 5.92
472 473 2.546795 CCTCACCCAGATGACGAATAGC 60.547 54.545 0.00 0.00 0.00 2.97
473 474 2.959030 TCCTCACCCAGATGACGAATAG 59.041 50.000 0.00 0.00 0.00 1.73
474 475 3.026707 TCCTCACCCAGATGACGAATA 57.973 47.619 0.00 0.00 0.00 1.75
475 476 1.866015 TCCTCACCCAGATGACGAAT 58.134 50.000 0.00 0.00 0.00 3.34
476 477 1.639722 TTCCTCACCCAGATGACGAA 58.360 50.000 0.00 0.00 0.00 3.85
477 478 1.866015 ATTCCTCACCCAGATGACGA 58.134 50.000 0.00 0.00 0.00 4.20
478 479 4.342862 AATATTCCTCACCCAGATGACG 57.657 45.455 0.00 0.00 0.00 4.35
479 480 8.160106 AGAATAAATATTCCTCACCCAGATGAC 58.840 37.037 9.07 0.00 42.29 3.06
480 481 8.280258 AGAATAAATATTCCTCACCCAGATGA 57.720 34.615 9.07 0.00 42.29 2.92
481 482 8.930846 AAGAATAAATATTCCTCACCCAGATG 57.069 34.615 9.07 0.00 42.29 2.90
485 486 9.807921 GGATAAAGAATAAATATTCCTCACCCA 57.192 33.333 9.07 0.00 42.29 4.51
486 487 9.244292 GGGATAAAGAATAAATATTCCTCACCC 57.756 37.037 9.07 11.18 42.29 4.61
487 488 9.244292 GGGGATAAAGAATAAATATTCCTCACC 57.756 37.037 9.07 8.19 42.29 4.02
501 502 8.781951 TGTCAAAATAGAGAGGGGATAAAGAAT 58.218 33.333 0.00 0.00 0.00 2.40
502 503 8.158025 TGTCAAAATAGAGAGGGGATAAAGAA 57.842 34.615 0.00 0.00 0.00 2.52
503 504 7.749377 TGTCAAAATAGAGAGGGGATAAAGA 57.251 36.000 0.00 0.00 0.00 2.52
504 505 8.213679 TGATGTCAAAATAGAGAGGGGATAAAG 58.786 37.037 0.00 0.00 0.00 1.85
505 506 8.101309 TGATGTCAAAATAGAGAGGGGATAAA 57.899 34.615 0.00 0.00 0.00 1.40
506 507 7.690454 TGATGTCAAAATAGAGAGGGGATAA 57.310 36.000 0.00 0.00 0.00 1.75
507 508 7.690454 TTGATGTCAAAATAGAGAGGGGATA 57.310 36.000 0.00 0.00 32.11 2.59
508 509 6.581388 TTGATGTCAAAATAGAGAGGGGAT 57.419 37.500 0.00 0.00 32.11 3.85
509 510 6.158520 TCATTGATGTCAAAATAGAGAGGGGA 59.841 38.462 0.00 0.00 39.55 4.81
510 511 6.359804 TCATTGATGTCAAAATAGAGAGGGG 58.640 40.000 0.00 0.00 39.55 4.79
511 512 7.201767 GGTTCATTGATGTCAAAATAGAGAGGG 60.202 40.741 0.00 0.00 39.55 4.30
512 513 7.466455 CGGTTCATTGATGTCAAAATAGAGAGG 60.466 40.741 0.00 0.00 39.55 3.69
513 514 7.065085 ACGGTTCATTGATGTCAAAATAGAGAG 59.935 37.037 0.00 0.00 39.55 3.20
514 515 6.878923 ACGGTTCATTGATGTCAAAATAGAGA 59.121 34.615 0.00 0.00 39.55 3.10
515 516 7.076842 ACGGTTCATTGATGTCAAAATAGAG 57.923 36.000 0.00 0.00 39.55 2.43
516 517 8.731275 ATACGGTTCATTGATGTCAAAATAGA 57.269 30.769 0.00 0.00 39.55 1.98
517 518 9.787532 AAATACGGTTCATTGATGTCAAAATAG 57.212 29.630 0.00 0.00 39.55 1.73
519 520 9.487790 AAAAATACGGTTCATTGATGTCAAAAT 57.512 25.926 0.00 0.00 39.55 1.82
520 521 8.879342 AAAAATACGGTTCATTGATGTCAAAA 57.121 26.923 0.00 0.00 39.55 2.44
521 522 9.400638 GTAAAAATACGGTTCATTGATGTCAAA 57.599 29.630 0.00 0.00 39.55 2.69
522 523 7.746916 CGTAAAAATACGGTTCATTGATGTCAA 59.253 33.333 0.00 0.00 39.56 3.18
523 524 7.095144 ACGTAAAAATACGGTTCATTGATGTCA 60.095 33.333 12.37 0.00 46.68 3.58
524 525 7.238571 ACGTAAAAATACGGTTCATTGATGTC 58.761 34.615 12.37 0.00 46.68 3.06
525 526 7.136289 ACGTAAAAATACGGTTCATTGATGT 57.864 32.000 12.37 0.00 46.68 3.06
546 547 9.719279 TGAAATAAGACAAAATTTACGAAACGT 57.281 25.926 1.91 1.91 44.35 3.99
581 582 9.614792 GTGGGTACATATTTTCTTACATTCTCT 57.385 33.333 0.00 0.00 0.00 3.10
582 583 8.837389 GGTGGGTACATATTTTCTTACATTCTC 58.163 37.037 0.00 0.00 0.00 2.87
583 584 8.333235 TGGTGGGTACATATTTTCTTACATTCT 58.667 33.333 0.00 0.00 0.00 2.40
584 585 8.514330 TGGTGGGTACATATTTTCTTACATTC 57.486 34.615 0.00 0.00 0.00 2.67
587 588 9.976776 TTTATGGTGGGTACATATTTTCTTACA 57.023 29.630 0.00 0.00 31.46 2.41
774 775 9.403110 GGTAATCTTACGATCGCTTCTTAAATA 57.597 33.333 16.60 0.00 34.50 1.40
775 776 8.142551 AGGTAATCTTACGATCGCTTCTTAAAT 58.857 33.333 16.60 0.00 34.50 1.40
776 777 7.486647 AGGTAATCTTACGATCGCTTCTTAAA 58.513 34.615 16.60 0.00 34.50 1.52
777 778 7.035840 AGGTAATCTTACGATCGCTTCTTAA 57.964 36.000 16.60 4.99 34.50 1.85
778 779 6.565435 CGAGGTAATCTTACGATCGCTTCTTA 60.565 42.308 16.60 4.47 37.02 2.10
779 780 5.517322 AGGTAATCTTACGATCGCTTCTT 57.483 39.130 16.60 5.46 34.50 2.52
780 781 4.319622 CGAGGTAATCTTACGATCGCTTCT 60.320 45.833 16.60 0.00 37.02 2.85
781 782 3.907194 CGAGGTAATCTTACGATCGCTTC 59.093 47.826 16.60 1.12 37.02 3.86
782 783 3.304525 CCGAGGTAATCTTACGATCGCTT 60.305 47.826 16.60 0.00 39.81 4.68
783 784 2.225963 CCGAGGTAATCTTACGATCGCT 59.774 50.000 16.60 5.20 39.81 4.93
784 785 2.582687 CCGAGGTAATCTTACGATCGC 58.417 52.381 16.60 0.00 39.81 4.58
785 786 2.225963 AGCCGAGGTAATCTTACGATCG 59.774 50.000 14.88 14.88 40.33 3.69
786 787 3.252701 TCAGCCGAGGTAATCTTACGATC 59.747 47.826 0.00 0.00 34.50 3.69
787 788 3.220110 TCAGCCGAGGTAATCTTACGAT 58.780 45.455 0.00 0.00 34.50 3.73
788 789 2.646930 TCAGCCGAGGTAATCTTACGA 58.353 47.619 0.00 0.00 34.50 3.43
789 790 3.066342 TCTTCAGCCGAGGTAATCTTACG 59.934 47.826 0.00 0.00 34.50 3.18
790 791 4.650754 TCTTCAGCCGAGGTAATCTTAC 57.349 45.455 0.00 0.00 0.00 2.34
791 792 5.871396 ATTCTTCAGCCGAGGTAATCTTA 57.129 39.130 0.00 0.00 0.00 2.10
792 793 4.762289 ATTCTTCAGCCGAGGTAATCTT 57.238 40.909 0.00 0.00 0.00 2.40
793 794 5.364157 AGTTATTCTTCAGCCGAGGTAATCT 59.636 40.000 0.00 0.00 0.00 2.40
794 795 5.602628 AGTTATTCTTCAGCCGAGGTAATC 58.397 41.667 0.00 0.00 0.00 1.75
795 796 5.615925 AGTTATTCTTCAGCCGAGGTAAT 57.384 39.130 0.00 0.00 0.00 1.89
796 797 5.416271 AAGTTATTCTTCAGCCGAGGTAA 57.584 39.130 0.00 0.00 0.00 2.85
797 798 6.726490 ATAAGTTATTCTTCAGCCGAGGTA 57.274 37.500 0.00 0.00 37.56 3.08
798 799 3.983044 AAGTTATTCTTCAGCCGAGGT 57.017 42.857 0.00 0.00 0.00 3.85
799 800 6.532365 GAATAAGTTATTCTTCAGCCGAGG 57.468 41.667 22.93 0.00 41.00 4.63
825 826 5.049828 TGTTACTATTCATCACGCAGGATG 58.950 41.667 8.00 8.00 44.78 3.51
826 827 5.050490 GTGTTACTATTCATCACGCAGGAT 58.950 41.667 0.00 0.00 0.00 3.24
827 828 4.159693 AGTGTTACTATTCATCACGCAGGA 59.840 41.667 0.00 0.00 34.71 3.86
828 829 4.433615 AGTGTTACTATTCATCACGCAGG 58.566 43.478 0.00 0.00 34.71 4.85
829 830 8.972262 ATATAGTGTTACTATTCATCACGCAG 57.028 34.615 6.78 0.00 38.17 5.18
852 853 9.668497 ACGCGGCAATCTATATCTATATCTATA 57.332 33.333 12.47 0.00 0.00 1.31
853 854 8.568676 ACGCGGCAATCTATATCTATATCTAT 57.431 34.615 12.47 0.00 0.00 1.98
854 855 7.981102 ACGCGGCAATCTATATCTATATCTA 57.019 36.000 12.47 0.00 0.00 1.98
855 856 6.885952 ACGCGGCAATCTATATCTATATCT 57.114 37.500 12.47 0.00 0.00 1.98
856 857 7.115095 GGAAACGCGGCAATCTATATCTATATC 59.885 40.741 12.47 0.00 0.00 1.63
857 858 6.924060 GGAAACGCGGCAATCTATATCTATAT 59.076 38.462 12.47 0.00 0.00 0.86
858 859 6.096423 AGGAAACGCGGCAATCTATATCTATA 59.904 38.462 12.47 0.00 0.00 1.31
859 860 5.105310 AGGAAACGCGGCAATCTATATCTAT 60.105 40.000 12.47 0.00 0.00 1.98
860 861 4.219944 AGGAAACGCGGCAATCTATATCTA 59.780 41.667 12.47 0.00 0.00 1.98
861 862 3.006967 AGGAAACGCGGCAATCTATATCT 59.993 43.478 12.47 0.00 0.00 1.98
862 863 3.326747 AGGAAACGCGGCAATCTATATC 58.673 45.455 12.47 0.00 0.00 1.63
863 864 3.402628 AGGAAACGCGGCAATCTATAT 57.597 42.857 12.47 0.00 0.00 0.86
864 865 2.902705 AGGAAACGCGGCAATCTATA 57.097 45.000 12.47 0.00 0.00 1.31
865 866 2.902705 TAGGAAACGCGGCAATCTAT 57.097 45.000 12.47 0.00 0.00 1.98
866 867 2.101750 TGATAGGAAACGCGGCAATCTA 59.898 45.455 12.47 6.00 0.00 1.98
867 868 1.134521 TGATAGGAAACGCGGCAATCT 60.135 47.619 12.47 3.70 0.00 2.40
868 869 1.295792 TGATAGGAAACGCGGCAATC 58.704 50.000 12.47 5.18 0.00 2.67
869 870 1.967319 ATGATAGGAAACGCGGCAAT 58.033 45.000 12.47 0.00 0.00 3.56
870 871 1.400142 CAATGATAGGAAACGCGGCAA 59.600 47.619 12.47 0.00 0.00 4.52
871 872 1.013596 CAATGATAGGAAACGCGGCA 58.986 50.000 12.47 0.00 0.00 5.69
872 873 0.317020 GCAATGATAGGAAACGCGGC 60.317 55.000 12.47 0.00 0.00 6.53
873 874 1.013596 TGCAATGATAGGAAACGCGG 58.986 50.000 12.47 0.00 0.00 6.46
874 875 2.823196 TTGCAATGATAGGAAACGCG 57.177 45.000 3.53 3.53 0.00 6.01
875 876 5.576384 TCATTTTTGCAATGATAGGAAACGC 59.424 36.000 0.00 0.00 32.21 4.84
876 877 7.579589 TTCATTTTTGCAATGATAGGAAACG 57.420 32.000 0.00 0.00 36.63 3.60
877 878 9.815936 CTTTTCATTTTTGCAATGATAGGAAAC 57.184 29.630 0.00 0.00 36.63 2.78
889 890 8.486383 CGTGATACAATTCTTTTCATTTTTGCA 58.514 29.630 0.00 0.00 0.00 4.08
890 891 8.487176 ACGTGATACAATTCTTTTCATTTTTGC 58.513 29.630 0.00 0.00 0.00 3.68
931 933 4.644163 TTAACCTCCCTTGAATTTCGGA 57.356 40.909 0.00 0.00 0.00 4.55
938 940 4.706616 ACCTCCTATTAACCTCCCTTGAA 58.293 43.478 0.00 0.00 0.00 2.69
987 989 9.990888 GCTGAGATTTATACGAACTTAATTACG 57.009 33.333 0.00 0.00 0.00 3.18
998 1000 2.313317 ACCGGGCTGAGATTTATACGA 58.687 47.619 6.32 0.00 0.00 3.43
1016 1018 7.439381 TCCAGATGTATTCCGATAAAACTACC 58.561 38.462 0.00 0.00 0.00 3.18
1032 1034 0.750850 GGGCTAGCGTTCCAGATGTA 59.249 55.000 9.00 0.00 0.00 2.29
1033 1035 1.522569 GGGCTAGCGTTCCAGATGT 59.477 57.895 9.00 0.00 0.00 3.06
1091 1286 0.956633 CCGATCCGAACTAATCCCGA 59.043 55.000 0.00 0.00 0.00 5.14
1098 1293 2.569059 CCTGTAGTCCGATCCGAACTA 58.431 52.381 0.00 0.00 0.00 2.24
1199 1397 6.347888 CGTCTTCTTCCTTTAATTTGCCGTTA 60.348 38.462 0.00 0.00 0.00 3.18
1200 1398 5.562113 CGTCTTCTTCCTTTAATTTGCCGTT 60.562 40.000 0.00 0.00 0.00 4.44
1201 1399 4.083484 CGTCTTCTTCCTTTAATTTGCCGT 60.083 41.667 0.00 0.00 0.00 5.68
1202 1400 4.403453 CGTCTTCTTCCTTTAATTTGCCG 58.597 43.478 0.00 0.00 0.00 5.69
1203 1401 4.733850 CCGTCTTCTTCCTTTAATTTGCC 58.266 43.478 0.00 0.00 0.00 4.52
1205 1403 4.671766 CGGCCGTCTTCTTCCTTTAATTTG 60.672 45.833 19.50 0.00 0.00 2.32
1206 1404 3.439129 CGGCCGTCTTCTTCCTTTAATTT 59.561 43.478 19.50 0.00 0.00 1.82
1207 1405 3.007635 CGGCCGTCTTCTTCCTTTAATT 58.992 45.455 19.50 0.00 0.00 1.40
1208 1406 2.027469 ACGGCCGTCTTCTTCCTTTAAT 60.027 45.455 28.70 0.00 0.00 1.40
1209 1407 1.345415 ACGGCCGTCTTCTTCCTTTAA 59.655 47.619 28.70 0.00 0.00 1.52
1210 1408 0.971386 ACGGCCGTCTTCTTCCTTTA 59.029 50.000 28.70 0.00 0.00 1.85
1211 1409 0.602905 CACGGCCGTCTTCTTCCTTT 60.603 55.000 31.80 0.00 0.00 3.11
1231 1429 2.004017 TCGGTTAATCGCCATTGTGAC 58.996 47.619 2.43 0.00 32.92 3.67
1302 1500 1.694169 GGAGGGGAGATCCAGCCAA 60.694 63.158 0.47 0.00 36.79 4.52
1716 1914 3.196469 AGCGGAAGTGATCTGAGAATTCA 59.804 43.478 8.44 0.00 36.44 2.57
2085 2289 1.202222 GGCAATGCAACGAGATGGAAG 60.202 52.381 7.79 0.00 0.00 3.46
2160 2364 3.807622 CAGACGTTAACTCAAAGAAGGCA 59.192 43.478 3.71 0.00 0.00 4.75
2198 2402 0.033405 TACCTTACGCCAGGAGAGCT 60.033 55.000 7.48 0.00 37.39 4.09
2311 2515 6.989659 ACGTCCGGTGAAGAACATAATATAT 58.010 36.000 0.00 0.00 0.00 0.86
2352 2556 3.917329 TGCATCTCATAGTAGTACGCC 57.083 47.619 0.00 0.00 0.00 5.68
2353 2557 4.854291 GTCATGCATCTCATAGTAGTACGC 59.146 45.833 0.00 0.00 33.19 4.42
2416 2620 5.892568 ACTAGGCTTAGTTGAGTATTCACG 58.107 41.667 2.03 0.00 36.75 4.35
2459 2663 6.645827 CACTATGCACATGGAAAATCAACAAA 59.354 34.615 0.00 0.00 0.00 2.83
2502 2706 6.927381 GCCTGCAAAGCAATTAATAGATCATT 59.073 34.615 3.57 0.00 38.41 2.57
2522 2726 3.014085 TAGTACGCACCAGGCCTGC 62.014 63.158 28.39 16.57 40.31 4.85
2543 2747 3.015327 ACAGTACATCGGACCTGTAGAC 58.985 50.000 0.00 0.00 36.44 2.59
2544 2748 3.014623 CACAGTACATCGGACCTGTAGA 58.985 50.000 0.00 0.00 36.06 2.59
2545 2749 2.753452 ACACAGTACATCGGACCTGTAG 59.247 50.000 0.00 0.00 36.06 2.74
2546 2750 2.490509 CACACAGTACATCGGACCTGTA 59.509 50.000 0.00 0.00 36.06 2.74
2547 2751 1.272490 CACACAGTACATCGGACCTGT 59.728 52.381 0.00 0.00 38.64 4.00
2548 2752 1.996292 CACACAGTACATCGGACCTG 58.004 55.000 0.00 0.00 0.00 4.00
2549 2753 0.246635 GCACACAGTACATCGGACCT 59.753 55.000 0.00 0.00 0.00 3.85
2553 2775 3.829886 ATTTTGCACACAGTACATCGG 57.170 42.857 0.00 0.00 0.00 4.18
2605 2913 3.194062 ACCAAAACCGAATTGCAGTTTG 58.806 40.909 2.21 2.21 34.12 2.93
2659 2967 7.038729 TGGTGCCACTTAATTAATGAATTCCAA 60.039 33.333 2.27 0.00 36.62 3.53
2660 2968 6.438741 TGGTGCCACTTAATTAATGAATTCCA 59.561 34.615 2.27 2.52 36.62 3.53
2689 2998 3.537580 GTTCCGGACCTATGTAATGCAA 58.462 45.455 1.83 0.00 0.00 4.08
2713 3022 3.234630 CTTCGTTCTGGGCCGGACA 62.235 63.158 16.41 3.97 0.00 4.02
2765 3074 7.074507 TGTTGTTAGTCACTTTTTAGCGAAA 57.925 32.000 0.00 0.00 0.00 3.46
2789 3098 3.701040 AGCTTGTGAGGTGTGAACAAAAT 59.299 39.130 0.00 0.00 33.67 1.82
2800 3109 7.224297 TGAATTCTTAGTTAAGCTTGTGAGGT 58.776 34.615 9.86 0.00 33.40 3.85
2826 3135 4.590487 GCGTCTTCGGGAACATGA 57.410 55.556 0.00 0.00 37.56 3.07
2854 3163 0.734309 GCATGTGATGTTGATCCGCA 59.266 50.000 0.00 0.00 0.00 5.69
2895 3204 7.642978 GCGTAGAAGTGATAAACTAATCGAAGA 59.357 37.037 0.00 0.00 38.56 2.87
2909 3218 3.895232 AATGGACTGCGTAGAAGTGAT 57.105 42.857 7.78 0.00 0.00 3.06
2910 3219 3.006430 TCAAATGGACTGCGTAGAAGTGA 59.994 43.478 7.78 0.00 0.00 3.41
2927 3237 5.916318 TGAGTTGCCTTTTGTGATTCAAAT 58.084 33.333 0.00 0.00 44.15 2.32
2956 3266 3.287222 AGGCATCTCTCTGACTACTCAC 58.713 50.000 0.00 0.00 30.81 3.51
2968 3278 3.682155 GCTCATGTTCAGAAGGCATCTCT 60.682 47.826 0.00 0.00 35.73 3.10
2998 3309 3.002791 CGTGTGCATCACCACTAGAATT 58.997 45.455 11.99 0.00 43.51 2.17
3045 3358 5.454062 TCCGGGATGAACATGGAAATATTT 58.546 37.500 0.00 0.00 0.00 1.40
3051 3364 1.578897 TCTCCGGGATGAACATGGAA 58.421 50.000 0.00 0.00 0.00 3.53
3070 3383 0.254178 CTACAGGAGCTGGCATGGTT 59.746 55.000 0.00 0.00 35.51 3.67
3105 3418 2.484264 CTCAACATCAACGGGTCCTTTC 59.516 50.000 0.00 0.00 0.00 2.62
3117 3430 2.747460 GGGCTGCGCTCAACATCA 60.747 61.111 9.73 0.00 0.00 3.07
3145 3458 1.852157 ACTTGGATGGGAGGCACCA 60.852 57.895 2.69 3.04 46.24 4.17
3214 3527 0.460109 GAAAAATGGTGGATGCGCCC 60.460 55.000 14.86 0.00 34.97 6.13
3221 3534 4.898265 TCACATCAAAGGAAAAATGGTGGA 59.102 37.500 0.00 0.00 29.39 4.02
3252 3565 3.320359 CCATCCAGGCGTACCCTT 58.680 61.111 0.52 0.00 43.06 3.95
3320 3633 1.450669 ACAACAAACGACCACCGCT 60.451 52.632 0.00 0.00 43.32 5.52
3336 3649 3.258123 TGTGAGAAATGAGATCGTCCACA 59.742 43.478 0.00 0.00 0.00 4.17
3352 3665 1.317431 GGCATTGCTGGCATGTGAGA 61.317 55.000 8.82 0.00 46.77 3.27
3368 3681 0.673333 ACGCTCATGACGATTTGGCA 60.673 50.000 19.74 0.00 0.00 4.92
3502 3815 0.524862 GTCCTCAAGCGGTCGTCTTA 59.475 55.000 0.00 0.00 0.00 2.10
3506 3819 1.215647 GATGTCCTCAAGCGGTCGT 59.784 57.895 0.00 0.00 0.00 4.34
3590 3903 8.589338 ACAAACAGAGTAGACATCAGTTTAGAT 58.411 33.333 0.00 0.00 35.12 1.98
3591 3904 7.867909 CACAAACAGAGTAGACATCAGTTTAGA 59.132 37.037 0.00 0.00 35.12 2.10
3592 3905 7.867909 TCACAAACAGAGTAGACATCAGTTTAG 59.132 37.037 0.00 0.00 35.12 1.85
3593 3906 7.722363 TCACAAACAGAGTAGACATCAGTTTA 58.278 34.615 0.00 0.00 35.12 2.01
3594 3907 6.582636 TCACAAACAGAGTAGACATCAGTTT 58.417 36.000 0.00 0.00 37.00 2.66
3595 3908 6.161855 TCACAAACAGAGTAGACATCAGTT 57.838 37.500 0.00 0.00 0.00 3.16
3596 3909 5.791336 TCACAAACAGAGTAGACATCAGT 57.209 39.130 0.00 0.00 0.00 3.41
3597 3910 6.629128 AGATCACAAACAGAGTAGACATCAG 58.371 40.000 0.00 0.00 0.00 2.90
3598 3911 6.596309 AGATCACAAACAGAGTAGACATCA 57.404 37.500 0.00 0.00 0.00 3.07
3599 3912 9.593134 AAATAGATCACAAACAGAGTAGACATC 57.407 33.333 0.00 0.00 0.00 3.06
3600 3913 9.950496 AAAATAGATCACAAACAGAGTAGACAT 57.050 29.630 0.00 0.00 0.00 3.06
3601 3914 9.778741 AAAAATAGATCACAAACAGAGTAGACA 57.221 29.630 0.00 0.00 0.00 3.41
3638 3951 9.518906 CACAAATATATAATGCAGCAACAAGAA 57.481 29.630 0.00 0.00 0.00 2.52
3639 3952 8.901793 TCACAAATATATAATGCAGCAACAAGA 58.098 29.630 0.00 0.00 0.00 3.02
3640 3953 9.177304 CTCACAAATATATAATGCAGCAACAAG 57.823 33.333 0.00 0.00 0.00 3.16
3641 3954 8.901793 TCTCACAAATATATAATGCAGCAACAA 58.098 29.630 0.00 0.00 0.00 2.83
3642 3955 8.449251 TCTCACAAATATATAATGCAGCAACA 57.551 30.769 0.00 0.00 0.00 3.33
3643 3956 7.536622 GCTCTCACAAATATATAATGCAGCAAC 59.463 37.037 0.00 0.00 0.00 4.17
3644 3957 7.446319 AGCTCTCACAAATATATAATGCAGCAA 59.554 33.333 0.00 0.00 0.00 3.91
3645 3958 6.938596 AGCTCTCACAAATATATAATGCAGCA 59.061 34.615 0.00 0.00 0.00 4.41
3646 3959 7.375106 AGCTCTCACAAATATATAATGCAGC 57.625 36.000 0.00 0.00 0.00 5.25


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.