Multiple sequence alignment - TraesCS1A01G171200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G171200 chr1A 100.000 4049 0 0 1 4049 306117212 306121260 0.000000e+00 7478.0
1 TraesCS1A01G171200 chr1D 91.340 2321 104 37 245 2518 241235020 241237290 0.000000e+00 3083.0
2 TraesCS1A01G171200 chr1D 95.590 1338 45 7 2518 3853 241237323 241238648 0.000000e+00 2132.0
3 TraesCS1A01G171200 chr1B 92.345 2051 79 26 492 2518 332808714 332806718 0.000000e+00 2846.0
4 TraesCS1A01G171200 chr1B 94.643 1344 48 10 2518 3858 332806690 332805368 0.000000e+00 2061.0
5 TraesCS1A01G171200 chr1B 88.800 250 23 3 248 492 332808997 332808748 6.580000e-78 302.0
6 TraesCS1A01G171200 chr7A 98.000 250 5 0 1 250 89645992 89645743 6.220000e-118 435.0
7 TraesCS1A01G171200 chr7A 97.590 249 5 1 1 248 247062495 247062247 3.740000e-115 425.0
8 TraesCS1A01G171200 chr3D 97.600 250 6 0 1 250 369645526 369645775 2.890000e-116 429.0
9 TraesCS1A01G171200 chr3D 100.000 30 0 0 4015 4044 596846519 596846490 5.650000e-04 56.5
10 TraesCS1A01G171200 chr5A 97.200 250 7 0 1 250 90224201 90223952 1.350000e-114 424.0
11 TraesCS1A01G171200 chr5D 97.189 249 7 0 1 249 53995961 53995713 4.840000e-114 422.0
12 TraesCS1A01G171200 chr5D 100.000 28 0 0 4015 4042 495349692 495349719 7.000000e-03 52.8
13 TraesCS1A01G171200 chr4B 95.951 247 10 0 1 247 116953580 116953826 6.300000e-108 401.0
14 TraesCS1A01G171200 chr6D 94.737 247 13 0 1 247 471545587 471545341 6.350000e-103 385.0
15 TraesCS1A01G171200 chr6D 93.684 95 6 0 3167 3261 124514489 124514583 4.220000e-30 143.0
16 TraesCS1A01G171200 chr5B 94.000 250 15 0 1 250 194406339 194406588 2.950000e-101 379.0
17 TraesCS1A01G171200 chr5B 92.996 257 16 2 1 256 72589327 72589582 1.370000e-99 374.0
18 TraesCS1A01G171200 chr5B 96.970 33 1 0 4015 4047 457971022 457970990 5.650000e-04 56.5
19 TraesCS1A01G171200 chrUn 93.684 95 6 0 3167 3261 380590999 380590905 4.220000e-30 143.0
20 TraesCS1A01G171200 chrUn 93.684 95 6 0 3167 3261 395675553 395675459 4.220000e-30 143.0
21 TraesCS1A01G171200 chrUn 93.684 95 6 0 3167 3261 453336062 453335968 4.220000e-30 143.0
22 TraesCS1A01G171200 chr7D 93.684 95 6 0 3167 3261 203496964 203497058 4.220000e-30 143.0
23 TraesCS1A01G171200 chr7D 93.684 95 6 0 3167 3261 381916943 381917037 4.220000e-30 143.0
24 TraesCS1A01G171200 chr4D 93.684 95 6 0 3167 3261 123332435 123332529 4.220000e-30 143.0
25 TraesCS1A01G171200 chr7B 100.000 31 0 0 4014 4044 134628315 134628345 1.570000e-04 58.4
26 TraesCS1A01G171200 chr3A 96.875 32 1 0 4013 4044 434821159 434821128 2.000000e-03 54.7
27 TraesCS1A01G171200 chr2B 100.000 28 0 0 4014 4041 25276380 25276407 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G171200 chr1A 306117212 306121260 4048 False 7478.000000 7478 100.000000 1 4049 1 chr1A.!!$F1 4048
1 TraesCS1A01G171200 chr1D 241235020 241238648 3628 False 2607.500000 3083 93.465000 245 3853 2 chr1D.!!$F1 3608
2 TraesCS1A01G171200 chr1B 332805368 332808997 3629 True 1736.333333 2846 91.929333 248 3858 3 chr1B.!!$R1 3610

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
240 241 0.036765 GGCACCGAACACATAGTGGA 60.037 55.0 1.93 0.0 37.94 4.02 F
244 245 0.462047 CCGAACACATAGTGGAGGGC 60.462 60.0 1.93 0.0 37.94 5.19 F
245 246 0.462047 CGAACACATAGTGGAGGGCC 60.462 60.0 0.00 0.0 37.94 5.80 F
645 698 0.522915 CGTTTCGCCCGAGTCTAGTC 60.523 60.0 0.00 0.0 0.00 2.59 F
646 699 0.524862 GTTTCGCCCGAGTCTAGTCA 59.475 55.0 0.00 0.0 0.00 3.41 F
647 700 0.524862 TTTCGCCCGAGTCTAGTCAC 59.475 55.0 0.00 0.0 0.00 3.67 F
1107 1160 0.806492 CGCCTACCTTCGGAGAAAGC 60.806 60.0 0.00 0.0 45.90 3.51 F
1111 1164 1.610554 TACCTTCGGAGAAAGCCCCG 61.611 60.0 0.00 0.0 45.90 5.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1446 1500 0.673333 TGCAGGTTCACATACGCAGG 60.673 55.000 0.00 0.00 0.00 4.85 R
1447 1501 1.155889 TTGCAGGTTCACATACGCAG 58.844 50.000 0.00 0.00 0.00 5.18 R
1920 2000 2.421424 GCCACTTGCAGATCTGGTTAAG 59.579 50.000 23.89 14.10 40.77 1.85 R
2096 2176 3.503748 AGCTTGTAGAACATGGAAACTGC 59.496 43.478 0.00 0.04 0.00 4.40 R
2580 2694 4.203226 TGTTCAACATGGAGTGCAAAGTA 58.797 39.130 0.00 0.00 0.00 2.24 R
2772 2887 4.452455 ACTTCACGGAACTGAAAGCTAATG 59.548 41.667 0.00 0.00 37.60 1.90 R
2893 3008 1.297968 TCCATTCCAGGAGGCATCAA 58.702 50.000 0.00 0.00 32.77 2.57 R
3211 3327 3.568007 CCCGTGGAAACTCTTTCATTTCA 59.432 43.478 0.00 0.00 41.43 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.469564 TTGCTCCGACGCCATATTT 57.530 47.368 0.00 0.00 0.00 1.40
19 20 1.295792 TTGCTCCGACGCCATATTTC 58.704 50.000 0.00 0.00 0.00 2.17
20 21 0.874175 TGCTCCGACGCCATATTTCG 60.874 55.000 0.00 0.00 0.00 3.46
21 22 0.874607 GCTCCGACGCCATATTTCGT 60.875 55.000 0.00 0.00 42.09 3.85
22 23 1.567504 CTCCGACGCCATATTTCGTT 58.432 50.000 1.19 0.00 39.22 3.85
23 24 1.257936 CTCCGACGCCATATTTCGTTG 59.742 52.381 6.73 6.73 39.22 4.10
24 25 1.135053 TCCGACGCCATATTTCGTTGA 60.135 47.619 12.84 5.81 41.30 3.18
25 26 1.257936 CCGACGCCATATTTCGTTGAG 59.742 52.381 12.84 4.13 41.30 3.02
26 27 1.257936 CGACGCCATATTTCGTTGAGG 59.742 52.381 7.61 0.00 41.30 3.86
27 28 1.003866 GACGCCATATTTCGTTGAGGC 60.004 52.381 0.00 0.00 39.22 4.70
28 29 1.013596 CGCCATATTTCGTTGAGGCA 58.986 50.000 0.00 0.00 42.10 4.75
29 30 1.400142 CGCCATATTTCGTTGAGGCAA 59.600 47.619 0.00 0.00 42.10 4.52
30 31 2.033299 CGCCATATTTCGTTGAGGCAAT 59.967 45.455 0.00 0.00 42.10 3.56
31 32 3.249799 CGCCATATTTCGTTGAGGCAATA 59.750 43.478 0.00 0.00 42.10 1.90
32 33 4.260990 CGCCATATTTCGTTGAGGCAATAA 60.261 41.667 0.00 0.00 42.10 1.40
33 34 5.587289 GCCATATTTCGTTGAGGCAATAAA 58.413 37.500 0.00 0.00 41.63 1.40
34 35 5.458779 GCCATATTTCGTTGAGGCAATAAAC 59.541 40.000 0.00 0.00 41.63 2.01
35 36 6.680378 GCCATATTTCGTTGAGGCAATAAACT 60.680 38.462 0.00 0.00 41.63 2.66
36 37 7.468084 GCCATATTTCGTTGAGGCAATAAACTA 60.468 37.037 0.00 0.00 41.63 2.24
37 38 8.070171 CCATATTTCGTTGAGGCAATAAACTAG 58.930 37.037 0.00 0.00 0.00 2.57
38 39 5.873179 TTTCGTTGAGGCAATAAACTAGG 57.127 39.130 0.00 0.00 0.00 3.02
39 40 4.546829 TCGTTGAGGCAATAAACTAGGT 57.453 40.909 0.00 0.00 0.00 3.08
40 41 5.664294 TCGTTGAGGCAATAAACTAGGTA 57.336 39.130 0.00 0.00 0.00 3.08
41 42 5.657474 TCGTTGAGGCAATAAACTAGGTAG 58.343 41.667 0.00 0.00 0.00 3.18
42 43 4.270325 CGTTGAGGCAATAAACTAGGTAGC 59.730 45.833 0.00 0.00 0.00 3.58
43 44 4.417426 TGAGGCAATAAACTAGGTAGCC 57.583 45.455 5.58 5.58 40.85 3.93
44 45 3.778075 TGAGGCAATAAACTAGGTAGCCA 59.222 43.478 13.76 0.00 42.90 4.75
45 46 4.127907 GAGGCAATAAACTAGGTAGCCAC 58.872 47.826 13.76 5.90 42.90 5.01
46 47 3.780850 AGGCAATAAACTAGGTAGCCACT 59.219 43.478 13.76 0.00 42.90 4.00
47 48 3.877508 GGCAATAAACTAGGTAGCCACTG 59.122 47.826 8.18 0.00 40.29 3.66
48 49 4.514401 GCAATAAACTAGGTAGCCACTGT 58.486 43.478 0.00 0.00 0.00 3.55
49 50 5.395990 GGCAATAAACTAGGTAGCCACTGTA 60.396 44.000 8.18 0.00 40.29 2.74
50 51 5.522824 GCAATAAACTAGGTAGCCACTGTAC 59.477 44.000 0.00 0.00 0.00 2.90
51 52 6.629739 GCAATAAACTAGGTAGCCACTGTACT 60.630 42.308 0.00 0.00 0.00 2.73
52 53 7.328737 CAATAAACTAGGTAGCCACTGTACTT 58.671 38.462 0.00 0.00 0.00 2.24
53 54 5.820404 AAACTAGGTAGCCACTGTACTTT 57.180 39.130 0.00 0.00 0.00 2.66
54 55 5.820404 AACTAGGTAGCCACTGTACTTTT 57.180 39.130 0.00 0.00 0.00 2.27
55 56 5.148651 ACTAGGTAGCCACTGTACTTTTG 57.851 43.478 0.00 0.00 0.00 2.44
56 57 2.779506 AGGTAGCCACTGTACTTTTGC 58.220 47.619 0.00 0.00 0.00 3.68
57 58 2.105821 AGGTAGCCACTGTACTTTTGCA 59.894 45.455 0.00 0.00 0.00 4.08
58 59 3.081804 GGTAGCCACTGTACTTTTGCAT 58.918 45.455 0.00 0.00 0.00 3.96
59 60 3.119849 GGTAGCCACTGTACTTTTGCATG 60.120 47.826 0.00 0.00 0.00 4.06
60 61 1.270550 AGCCACTGTACTTTTGCATGC 59.729 47.619 11.82 11.82 0.00 4.06
61 62 1.967762 CCACTGTACTTTTGCATGCG 58.032 50.000 14.09 0.35 0.00 4.73
62 63 1.535028 CCACTGTACTTTTGCATGCGA 59.465 47.619 14.09 8.74 0.00 5.10
63 64 2.413239 CCACTGTACTTTTGCATGCGAG 60.413 50.000 14.09 13.06 0.00 5.03
64 65 1.806542 ACTGTACTTTTGCATGCGAGG 59.193 47.619 14.09 10.46 0.00 4.63
65 66 0.521291 TGTACTTTTGCATGCGAGGC 59.479 50.000 14.09 8.80 0.00 4.70
66 67 0.521291 GTACTTTTGCATGCGAGGCA 59.479 50.000 14.09 0.00 44.86 4.75
67 68 0.521291 TACTTTTGCATGCGAGGCAC 59.479 50.000 14.09 0.00 43.04 5.01
68 69 1.444895 CTTTTGCATGCGAGGCACC 60.445 57.895 14.09 0.00 43.04 5.01
69 70 2.144833 CTTTTGCATGCGAGGCACCA 62.145 55.000 14.09 0.00 43.04 4.17
70 71 2.419057 TTTTGCATGCGAGGCACCAC 62.419 55.000 14.09 0.00 43.04 4.16
82 83 3.991051 CACCACCGGCGAGACACT 61.991 66.667 9.30 0.00 0.00 3.55
83 84 3.991051 ACCACCGGCGAGACACTG 61.991 66.667 9.30 0.00 0.00 3.66
85 86 4.363990 CACCGGCGAGACACTGCT 62.364 66.667 9.30 0.00 0.00 4.24
86 87 3.616721 ACCGGCGAGACACTGCTT 61.617 61.111 9.30 0.00 0.00 3.91
87 88 2.357517 CCGGCGAGACACTGCTTT 60.358 61.111 9.30 0.00 0.00 3.51
88 89 2.671177 CCGGCGAGACACTGCTTTG 61.671 63.158 9.30 0.00 0.00 2.77
89 90 1.664649 CGGCGAGACACTGCTTTGA 60.665 57.895 0.00 0.00 0.00 2.69
90 91 1.621301 CGGCGAGACACTGCTTTGAG 61.621 60.000 0.00 0.00 0.00 3.02
91 92 1.495069 GCGAGACACTGCTTTGAGC 59.505 57.895 0.00 0.00 42.82 4.26
92 93 0.948141 GCGAGACACTGCTTTGAGCT 60.948 55.000 1.29 0.00 42.97 4.09
93 94 0.788995 CGAGACACTGCTTTGAGCTG 59.211 55.000 0.00 5.43 42.97 4.24
94 95 1.603931 CGAGACACTGCTTTGAGCTGA 60.604 52.381 12.77 0.00 41.94 4.26
95 96 2.697654 GAGACACTGCTTTGAGCTGAT 58.302 47.619 12.77 1.96 41.94 2.90
96 97 3.674410 CGAGACACTGCTTTGAGCTGATA 60.674 47.826 12.77 0.00 41.94 2.15
97 98 4.440880 GAGACACTGCTTTGAGCTGATAT 58.559 43.478 12.77 0.00 41.94 1.63
98 99 5.595885 GAGACACTGCTTTGAGCTGATATA 58.404 41.667 12.77 0.00 41.94 0.86
99 100 6.172136 AGACACTGCTTTGAGCTGATATAT 57.828 37.500 12.77 0.00 41.94 0.86
100 101 6.590068 AGACACTGCTTTGAGCTGATATATT 58.410 36.000 12.77 0.00 41.94 1.28
101 102 7.730084 AGACACTGCTTTGAGCTGATATATTA 58.270 34.615 12.77 0.00 41.94 0.98
102 103 7.655328 AGACACTGCTTTGAGCTGATATATTAC 59.345 37.037 12.77 0.00 41.94 1.89
103 104 7.504403 ACACTGCTTTGAGCTGATATATTACT 58.496 34.615 12.77 0.00 41.94 2.24
104 105 8.642432 ACACTGCTTTGAGCTGATATATTACTA 58.358 33.333 12.77 0.00 41.94 1.82
105 106 9.138062 CACTGCTTTGAGCTGATATATTACTAG 57.862 37.037 12.77 0.00 41.94 2.57
106 107 8.865090 ACTGCTTTGAGCTGATATATTACTAGT 58.135 33.333 12.77 0.00 41.94 2.57
107 108 9.703892 CTGCTTTGAGCTGATATATTACTAGTT 57.296 33.333 0.00 0.00 41.94 2.24
122 123 4.926140 ACTAGTTTATACGTAGGTGGGC 57.074 45.455 0.08 0.00 0.00 5.36
123 124 3.638627 ACTAGTTTATACGTAGGTGGGCC 59.361 47.826 0.08 0.00 0.00 5.80
124 125 2.469952 AGTTTATACGTAGGTGGGCCA 58.530 47.619 0.00 0.00 37.19 5.36
125 126 2.433239 AGTTTATACGTAGGTGGGCCAG 59.567 50.000 6.40 0.00 37.19 4.85
126 127 2.431782 GTTTATACGTAGGTGGGCCAGA 59.568 50.000 6.40 0.00 37.19 3.86
127 128 1.991121 TATACGTAGGTGGGCCAGAG 58.009 55.000 6.40 0.00 37.19 3.35
128 129 0.759436 ATACGTAGGTGGGCCAGAGG 60.759 60.000 6.40 3.63 37.19 3.69
129 130 2.159101 TACGTAGGTGGGCCAGAGGT 62.159 60.000 6.40 9.98 37.19 3.85
130 131 2.990479 GTAGGTGGGCCAGAGGTG 59.010 66.667 6.40 0.00 37.19 4.00
132 133 3.943137 TAGGTGGGCCAGAGGTGGG 62.943 68.421 6.40 0.00 45.17 4.61
134 135 4.351054 GTGGGCCAGAGGTGGGTG 62.351 72.222 6.40 0.00 45.17 4.61
138 139 4.351054 GCCAGAGGTGGGTGGGTG 62.351 72.222 0.00 0.00 45.17 4.61
139 140 4.351054 CCAGAGGTGGGTGGGTGC 62.351 72.222 0.00 0.00 40.67 5.01
140 141 4.351054 CAGAGGTGGGTGGGTGCC 62.351 72.222 0.00 0.00 0.00 5.01
141 142 4.918360 AGAGGTGGGTGGGTGCCA 62.918 66.667 0.00 0.00 0.00 4.92
142 143 3.897122 GAGGTGGGTGGGTGCCAA 61.897 66.667 0.00 0.00 34.18 4.52
143 144 3.434179 AGGTGGGTGGGTGCCAAA 61.434 61.111 0.00 0.00 34.18 3.28
144 145 2.203773 GGTGGGTGGGTGCCAAAT 60.204 61.111 0.00 0.00 34.18 2.32
145 146 2.282783 GGTGGGTGGGTGCCAAATC 61.283 63.158 0.00 0.00 34.18 2.17
146 147 2.119391 TGGGTGGGTGCCAAATCC 59.881 61.111 0.00 0.00 34.18 3.01
147 148 2.445155 GGGTGGGTGCCAAATCCT 59.555 61.111 0.00 0.00 34.18 3.24
148 149 1.229177 GGGTGGGTGCCAAATCCTT 60.229 57.895 0.00 0.00 34.18 3.36
149 150 1.257750 GGGTGGGTGCCAAATCCTTC 61.258 60.000 0.00 0.00 34.18 3.46
150 151 0.541764 GGTGGGTGCCAAATCCTTCA 60.542 55.000 0.00 0.00 34.18 3.02
151 152 0.603065 GTGGGTGCCAAATCCTTCAC 59.397 55.000 0.00 0.00 34.18 3.18
152 153 0.893270 TGGGTGCCAAATCCTTCACG 60.893 55.000 0.00 0.00 0.00 4.35
153 154 0.893727 GGGTGCCAAATCCTTCACGT 60.894 55.000 0.00 0.00 0.00 4.49
154 155 0.958822 GGTGCCAAATCCTTCACGTT 59.041 50.000 0.00 0.00 0.00 3.99
155 156 1.335872 GGTGCCAAATCCTTCACGTTG 60.336 52.381 0.00 0.00 0.00 4.10
156 157 1.336755 GTGCCAAATCCTTCACGTTGT 59.663 47.619 0.00 0.00 0.00 3.32
157 158 1.336440 TGCCAAATCCTTCACGTTGTG 59.664 47.619 0.00 0.00 34.45 3.33
158 159 1.335872 GCCAAATCCTTCACGTTGTGG 60.336 52.381 0.00 0.00 33.87 4.17
159 160 1.953686 CCAAATCCTTCACGTTGTGGT 59.046 47.619 0.00 0.00 33.87 4.16
160 161 2.287547 CCAAATCCTTCACGTTGTGGTG 60.288 50.000 0.00 0.00 39.29 4.17
161 162 0.951558 AATCCTTCACGTTGTGGTGC 59.048 50.000 0.00 0.00 37.83 5.01
162 163 0.889186 ATCCTTCACGTTGTGGTGCC 60.889 55.000 0.00 0.00 37.83 5.01
163 164 2.631428 CTTCACGTTGTGGTGCCG 59.369 61.111 0.00 0.00 37.83 5.69
164 165 2.892334 CTTCACGTTGTGGTGCCGG 61.892 63.158 0.00 0.00 37.83 6.13
165 166 3.683966 TTCACGTTGTGGTGCCGGT 62.684 57.895 1.90 0.00 37.83 5.28
166 167 3.947841 CACGTTGTGGTGCCGGTG 61.948 66.667 1.90 0.00 0.00 4.94
169 170 2.281208 GTTGTGGTGCCGGTGCTA 60.281 61.111 1.90 0.00 38.71 3.49
170 171 1.894756 GTTGTGGTGCCGGTGCTAA 60.895 57.895 1.90 0.00 38.71 3.09
171 172 1.152943 TTGTGGTGCCGGTGCTAAA 60.153 52.632 1.90 0.00 38.71 1.85
172 173 1.448922 TTGTGGTGCCGGTGCTAAAC 61.449 55.000 1.90 0.00 38.71 2.01
173 174 1.599797 GTGGTGCCGGTGCTAAACT 60.600 57.895 1.90 0.00 38.71 2.66
174 175 1.149627 TGGTGCCGGTGCTAAACTT 59.850 52.632 1.90 0.00 38.71 2.66
175 176 0.466555 TGGTGCCGGTGCTAAACTTT 60.467 50.000 1.90 0.00 38.71 2.66
176 177 0.671796 GGTGCCGGTGCTAAACTTTT 59.328 50.000 1.90 0.00 38.71 2.27
177 178 1.067974 GGTGCCGGTGCTAAACTTTTT 59.932 47.619 1.90 0.00 38.71 1.94
178 179 2.293955 GGTGCCGGTGCTAAACTTTTTA 59.706 45.455 1.90 0.00 38.71 1.52
179 180 3.057104 GGTGCCGGTGCTAAACTTTTTAT 60.057 43.478 1.90 0.00 38.71 1.40
180 181 4.156373 GGTGCCGGTGCTAAACTTTTTATA 59.844 41.667 1.90 0.00 38.71 0.98
181 182 5.163591 GGTGCCGGTGCTAAACTTTTTATAT 60.164 40.000 1.90 0.00 38.71 0.86
182 183 6.327154 GTGCCGGTGCTAAACTTTTTATATT 58.673 36.000 1.90 0.00 38.71 1.28
183 184 6.809689 GTGCCGGTGCTAAACTTTTTATATTT 59.190 34.615 1.90 0.00 38.71 1.40
184 185 6.809196 TGCCGGTGCTAAACTTTTTATATTTG 59.191 34.615 1.90 0.00 38.71 2.32
185 186 6.254804 GCCGGTGCTAAACTTTTTATATTTGG 59.745 38.462 1.90 0.00 33.53 3.28
186 187 6.254804 CCGGTGCTAAACTTTTTATATTTGGC 59.745 38.462 0.00 0.00 39.47 4.52
187 188 6.809196 CGGTGCTAAACTTTTTATATTTGGCA 59.191 34.615 3.28 3.28 44.39 4.92
188 189 7.491048 CGGTGCTAAACTTTTTATATTTGGCAT 59.509 33.333 9.65 0.00 46.81 4.40
189 190 8.817100 GGTGCTAAACTTTTTATATTTGGCATC 58.183 33.333 9.65 6.11 46.81 3.91
190 191 8.531530 GTGCTAAACTTTTTATATTTGGCATCG 58.468 33.333 9.65 0.00 46.81 3.84
191 192 8.462811 TGCTAAACTTTTTATATTTGGCATCGA 58.537 29.630 3.28 0.00 42.56 3.59
192 193 9.296400 GCTAAACTTTTTATATTTGGCATCGAA 57.704 29.630 0.00 0.00 39.02 3.71
195 196 8.687824 AACTTTTTATATTTGGCATCGAAGTG 57.312 30.769 0.00 0.00 0.00 3.16
196 197 7.826690 ACTTTTTATATTTGGCATCGAAGTGT 58.173 30.769 0.00 0.00 0.00 3.55
197 198 8.952278 ACTTTTTATATTTGGCATCGAAGTGTA 58.048 29.630 0.00 0.00 0.00 2.90
198 199 9.950680 CTTTTTATATTTGGCATCGAAGTGTAT 57.049 29.630 0.00 0.00 0.00 2.29
199 200 9.729023 TTTTTATATTTGGCATCGAAGTGTATG 57.271 29.630 0.00 0.00 0.00 2.39
200 201 8.445275 TTTATATTTGGCATCGAAGTGTATGT 57.555 30.769 0.00 0.00 0.00 2.29
201 202 4.621068 ATTTGGCATCGAAGTGTATGTG 57.379 40.909 0.00 0.00 0.00 3.21
202 203 2.022764 TGGCATCGAAGTGTATGTGG 57.977 50.000 0.00 0.00 0.00 4.17
203 204 0.657840 GGCATCGAAGTGTATGTGGC 59.342 55.000 0.00 0.00 0.00 5.01
204 205 1.368641 GCATCGAAGTGTATGTGGCA 58.631 50.000 0.00 0.00 0.00 4.92
205 206 1.737236 GCATCGAAGTGTATGTGGCAA 59.263 47.619 0.00 0.00 0.00 4.52
206 207 2.161410 GCATCGAAGTGTATGTGGCAAA 59.839 45.455 0.00 0.00 0.00 3.68
207 208 3.747193 CATCGAAGTGTATGTGGCAAAC 58.253 45.455 0.00 0.00 0.00 2.93
208 209 3.120321 TCGAAGTGTATGTGGCAAACT 57.880 42.857 0.00 0.00 0.00 2.66
209 210 3.472652 TCGAAGTGTATGTGGCAAACTT 58.527 40.909 0.00 0.00 33.91 2.66
210 211 3.880490 TCGAAGTGTATGTGGCAAACTTT 59.120 39.130 0.00 0.00 31.45 2.66
211 212 4.336993 TCGAAGTGTATGTGGCAAACTTTT 59.663 37.500 0.00 0.00 31.45 2.27
212 213 5.040635 CGAAGTGTATGTGGCAAACTTTTT 58.959 37.500 0.00 0.00 31.45 1.94
213 214 6.038382 TCGAAGTGTATGTGGCAAACTTTTTA 59.962 34.615 0.00 0.00 31.45 1.52
214 215 6.693545 CGAAGTGTATGTGGCAAACTTTTTAA 59.306 34.615 0.00 0.00 31.45 1.52
215 216 7.221067 CGAAGTGTATGTGGCAAACTTTTTAAA 59.779 33.333 0.00 0.00 31.45 1.52
216 217 8.956533 AAGTGTATGTGGCAAACTTTTTAAAT 57.043 26.923 0.00 0.00 0.00 1.40
217 218 8.956533 AGTGTATGTGGCAAACTTTTTAAATT 57.043 26.923 0.00 0.00 0.00 1.82
218 219 9.389755 AGTGTATGTGGCAAACTTTTTAAATTT 57.610 25.926 0.00 0.00 0.00 1.82
219 220 9.644993 GTGTATGTGGCAAACTTTTTAAATTTC 57.355 29.630 0.00 0.00 0.00 2.17
220 221 9.606631 TGTATGTGGCAAACTTTTTAAATTTCT 57.393 25.926 0.00 0.00 0.00 2.52
221 222 9.862585 GTATGTGGCAAACTTTTTAAATTTCTG 57.137 29.630 0.00 0.00 0.00 3.02
222 223 7.313951 TGTGGCAAACTTTTTAAATTTCTGG 57.686 32.000 0.00 0.00 0.00 3.86
223 224 6.183360 TGTGGCAAACTTTTTAAATTTCTGGC 60.183 34.615 0.00 0.00 0.00 4.85
224 225 5.882557 TGGCAAACTTTTTAAATTTCTGGCA 59.117 32.000 0.00 8.84 0.00 4.92
225 226 6.183360 TGGCAAACTTTTTAAATTTCTGGCAC 60.183 34.615 0.00 0.00 0.00 5.01
226 227 6.198687 GCAAACTTTTTAAATTTCTGGCACC 58.801 36.000 0.00 0.00 0.00 5.01
227 228 6.418141 CAAACTTTTTAAATTTCTGGCACCG 58.582 36.000 0.00 0.00 0.00 4.94
228 229 5.523438 ACTTTTTAAATTTCTGGCACCGA 57.477 34.783 0.00 0.00 0.00 4.69
229 230 5.908341 ACTTTTTAAATTTCTGGCACCGAA 58.092 33.333 0.00 0.00 0.00 4.30
230 231 5.751509 ACTTTTTAAATTTCTGGCACCGAAC 59.248 36.000 0.00 0.00 0.00 3.95
231 232 4.920640 TTTAAATTTCTGGCACCGAACA 57.079 36.364 0.00 0.00 0.00 3.18
232 233 2.793278 AAATTTCTGGCACCGAACAC 57.207 45.000 0.00 0.00 0.00 3.32
233 234 1.686355 AATTTCTGGCACCGAACACA 58.314 45.000 0.00 0.00 0.00 3.72
234 235 1.909700 ATTTCTGGCACCGAACACAT 58.090 45.000 0.00 0.00 0.00 3.21
235 236 2.552599 TTTCTGGCACCGAACACATA 57.447 45.000 0.00 0.00 0.00 2.29
236 237 2.093306 TTCTGGCACCGAACACATAG 57.907 50.000 0.00 0.00 0.00 2.23
237 238 0.973632 TCTGGCACCGAACACATAGT 59.026 50.000 0.00 0.00 0.00 2.12
238 239 1.078709 CTGGCACCGAACACATAGTG 58.921 55.000 0.00 0.00 39.75 2.74
239 240 0.321210 TGGCACCGAACACATAGTGG 60.321 55.000 1.93 0.00 37.94 4.00
240 241 0.036765 GGCACCGAACACATAGTGGA 60.037 55.000 1.93 0.00 37.94 4.02
241 242 1.359848 GCACCGAACACATAGTGGAG 58.640 55.000 1.93 0.00 37.94 3.86
242 243 2.007049 GCACCGAACACATAGTGGAGG 61.007 57.143 1.93 4.55 37.94 4.30
243 244 0.902531 ACCGAACACATAGTGGAGGG 59.097 55.000 1.93 2.26 37.94 4.30
244 245 0.462047 CCGAACACATAGTGGAGGGC 60.462 60.000 1.93 0.00 37.94 5.19
245 246 0.462047 CGAACACATAGTGGAGGGCC 60.462 60.000 0.00 0.00 37.94 5.80
246 247 0.912486 GAACACATAGTGGAGGGCCT 59.088 55.000 5.25 5.25 37.94 5.19
271 272 1.268845 GGTGTTTCCGATTTGCGTTGT 60.269 47.619 0.00 0.00 38.67 3.32
273 274 3.548415 GGTGTTTCCGATTTGCGTTGTAA 60.548 43.478 0.00 0.00 38.67 2.41
289 290 1.083242 GTAATTCGCGGCCGTTGGTA 61.083 55.000 28.70 10.79 35.54 3.25
297 298 0.748450 CGGCCGTTGGTATCTCCTAA 59.252 55.000 19.50 0.00 37.07 2.69
319 320 9.979270 CCTAATATGCATCGATGACTTTTTATC 57.021 33.333 29.20 8.17 0.00 1.75
438 454 3.078891 AGGAAGAAGATTTCAGCACCC 57.921 47.619 0.00 0.00 0.00 4.61
445 461 3.967332 AGATTTCAGCACCCCAAAATG 57.033 42.857 0.00 0.00 0.00 2.32
473 489 4.551702 AATTTTATTTGTCTGGGTGGGC 57.448 40.909 0.00 0.00 0.00 5.36
513 563 7.160547 TGTGACACTTAATATACGGTCTTGA 57.839 36.000 7.20 0.00 0.00 3.02
567 617 1.219664 CGAACCGGGCCACAGAATA 59.780 57.895 6.32 0.00 0.00 1.75
645 698 0.522915 CGTTTCGCCCGAGTCTAGTC 60.523 60.000 0.00 0.00 0.00 2.59
646 699 0.524862 GTTTCGCCCGAGTCTAGTCA 59.475 55.000 0.00 0.00 0.00 3.41
647 700 0.524862 TTTCGCCCGAGTCTAGTCAC 59.475 55.000 0.00 0.00 0.00 3.67
648 701 1.310933 TTCGCCCGAGTCTAGTCACC 61.311 60.000 0.00 0.00 0.00 4.02
649 702 1.749638 CGCCCGAGTCTAGTCACCT 60.750 63.158 0.00 0.00 0.00 4.00
728 781 3.309954 GCGATTTTATCCACTCTCACCAC 59.690 47.826 0.00 0.00 0.00 4.16
1107 1160 0.806492 CGCCTACCTTCGGAGAAAGC 60.806 60.000 0.00 0.00 45.90 3.51
1111 1164 1.610554 TACCTTCGGAGAAAGCCCCG 61.611 60.000 0.00 0.00 45.90 5.73
1394 1448 5.349543 GCCAAATGCTTTGAAGTTCTTATGG 59.650 40.000 4.17 3.25 43.26 2.74
1445 1499 9.926751 CTAGCTAGAAAATTACATTGACATGTG 57.073 33.333 16.15 0.00 43.92 3.21
1446 1500 7.253422 AGCTAGAAAATTACATTGACATGTGC 58.747 34.615 1.15 0.00 43.92 4.57
1447 1501 6.473455 GCTAGAAAATTACATTGACATGTGCC 59.527 38.462 1.15 0.00 43.92 5.01
1494 1571 2.600420 CGTTGCTAGTGCTATGTGAGTG 59.400 50.000 0.00 0.00 40.48 3.51
1495 1572 3.589988 GTTGCTAGTGCTATGTGAGTGT 58.410 45.455 0.00 0.00 40.48 3.55
1503 1580 4.283467 AGTGCTATGTGAGTGTTAGGTGAA 59.717 41.667 0.00 0.00 0.00 3.18
1507 1584 6.149308 TGCTATGTGAGTGTTAGGTGAATTTG 59.851 38.462 0.00 0.00 0.00 2.32
1592 1669 6.870965 CAGAGGATAGGATTTGATACTTTCCG 59.129 42.308 4.61 0.00 43.69 4.30
1602 1679 4.884668 TGATACTTTCCGTCCTTCTGTT 57.115 40.909 0.00 0.00 0.00 3.16
1839 1916 6.511444 GCACATATTTTGCAAACAATGTGTGT 60.511 34.615 36.66 22.98 46.35 3.72
2096 2176 2.424956 GCAAAGATTTGGGCTACTCTGG 59.575 50.000 7.38 0.00 38.57 3.86
2125 2205 5.376625 TCCATGTTCTACAAGCTTGAAGTT 58.623 37.500 32.50 12.86 0.00 2.66
2267 2347 5.923204 AGACCAGTATCTTTATGCTTCCAG 58.077 41.667 0.00 0.00 0.00 3.86
2377 2457 4.006319 CCTTCCTTTTTCAGTAGGCTCTG 58.994 47.826 0.00 0.00 36.85 3.35
2491 2572 2.029918 CCTTTTTGTTAGTGCAGCTCCC 60.030 50.000 0.00 0.00 0.00 4.30
2772 2887 2.719426 ACTCTTGTGTGTACTACGCC 57.281 50.000 0.00 0.00 39.06 5.68
2806 2921 4.989168 AGTTCCGTGAAGTACTGACATTTC 59.011 41.667 0.00 0.00 0.00 2.17
2893 3008 0.912486 CCTTCTCGGGACAGGGAAAT 59.088 55.000 5.81 0.00 0.00 2.17
3113 3228 1.484227 TTGCCGAAACGTGTCGACTG 61.484 55.000 29.19 13.70 43.86 3.51
3162 3277 7.695618 ACACGTTACTGACTAGTTCGATATTTC 59.304 37.037 0.00 0.00 38.36 2.17
3252 3368 3.982701 CGGGCGTCGTATATCATTTGTTA 59.017 43.478 0.00 0.00 0.00 2.41
3600 3719 5.882557 TGGAGGAAGAATAAGAATGACTTGC 59.117 40.000 0.00 0.00 39.38 4.01
3632 3751 1.919918 GCTGTGTGTGACTTGCAAAAC 59.080 47.619 0.00 0.00 0.00 2.43
3729 3848 3.057969 AGATGTGATGTGGCGAAGAAA 57.942 42.857 0.00 0.00 0.00 2.52
3740 3859 1.943340 GGCGAAGAAATCATCTGGACC 59.057 52.381 0.00 0.00 38.79 4.46
3765 3884 9.288576 CCTAGATGATTTTGCCATATTCTACAA 57.711 33.333 0.00 0.00 0.00 2.41
3770 3889 8.750515 TGATTTTGCCATATTCTACAATCTGA 57.249 30.769 0.00 0.00 0.00 3.27
3849 3969 4.220602 CCTTTTGGGACTTGGTAAAGATGG 59.779 45.833 0.00 0.00 34.39 3.51
3855 3975 4.082190 GGGACTTGGTAAAGATGGCTTTTC 60.082 45.833 0.00 0.00 41.43 2.29
3858 3978 6.332735 ACTTGGTAAAGATGGCTTTTCTTC 57.667 37.500 0.00 0.00 41.43 2.87
3859 3979 6.071320 ACTTGGTAAAGATGGCTTTTCTTCT 58.929 36.000 0.00 0.00 41.43 2.85
3860 3980 6.207614 ACTTGGTAAAGATGGCTTTTCTTCTC 59.792 38.462 0.00 0.00 41.43 2.87
3861 3981 5.010282 TGGTAAAGATGGCTTTTCTTCTCC 58.990 41.667 0.00 0.23 41.43 3.71
3862 3982 4.399618 GGTAAAGATGGCTTTTCTTCTCCC 59.600 45.833 0.00 0.00 41.43 4.30
3863 3983 4.394797 AAAGATGGCTTTTCTTCTCCCT 57.605 40.909 0.00 0.00 41.43 4.20
3864 3984 4.394797 AAGATGGCTTTTCTTCTCCCTT 57.605 40.909 0.00 0.00 0.00 3.95
3865 3985 4.394797 AGATGGCTTTTCTTCTCCCTTT 57.605 40.909 0.00 0.00 0.00 3.11
3866 3986 4.745351 AGATGGCTTTTCTTCTCCCTTTT 58.255 39.130 0.00 0.00 0.00 2.27
3867 3987 5.150715 AGATGGCTTTTCTTCTCCCTTTTT 58.849 37.500 0.00 0.00 0.00 1.94
3888 4008 6.993786 TTTTCCTTTTGGCCTTTTTAAGTG 57.006 33.333 3.32 0.00 40.12 3.16
3889 4009 5.685520 TTCCTTTTGGCCTTTTTAAGTGT 57.314 34.783 3.32 0.00 40.12 3.55
3890 4010 6.793505 TTCCTTTTGGCCTTTTTAAGTGTA 57.206 33.333 3.32 0.00 40.12 2.90
3891 4011 6.987403 TCCTTTTGGCCTTTTTAAGTGTAT 57.013 33.333 3.32 0.00 40.12 2.29
3892 4012 8.480133 TTCCTTTTGGCCTTTTTAAGTGTATA 57.520 30.769 3.32 0.00 40.12 1.47
3893 4013 8.658840 TCCTTTTGGCCTTTTTAAGTGTATAT 57.341 30.769 3.32 0.00 40.12 0.86
3894 4014 8.745590 TCCTTTTGGCCTTTTTAAGTGTATATC 58.254 33.333 3.32 0.00 40.12 1.63
3895 4015 8.527810 CCTTTTGGCCTTTTTAAGTGTATATCA 58.472 33.333 3.32 0.00 0.00 2.15
3896 4016 9.573133 CTTTTGGCCTTTTTAAGTGTATATCAG 57.427 33.333 3.32 0.00 0.00 2.90
3897 4017 6.693315 TGGCCTTTTTAAGTGTATATCAGC 57.307 37.500 3.32 0.00 0.00 4.26
3898 4018 6.184068 TGGCCTTTTTAAGTGTATATCAGCA 58.816 36.000 3.32 0.00 0.00 4.41
3899 4019 6.318648 TGGCCTTTTTAAGTGTATATCAGCAG 59.681 38.462 3.32 0.00 0.00 4.24
3900 4020 6.238759 GGCCTTTTTAAGTGTATATCAGCAGG 60.239 42.308 0.00 0.00 0.00 4.85
3901 4021 6.729187 CCTTTTTAAGTGTATATCAGCAGGC 58.271 40.000 0.00 0.00 0.00 4.85
3902 4022 6.318648 CCTTTTTAAGTGTATATCAGCAGGCA 59.681 38.462 0.00 0.00 0.00 4.75
3903 4023 7.148086 CCTTTTTAAGTGTATATCAGCAGGCAA 60.148 37.037 0.00 0.00 0.00 4.52
3904 4024 7.695480 TTTTAAGTGTATATCAGCAGGCAAA 57.305 32.000 0.00 0.00 0.00 3.68
3905 4025 7.880160 TTTAAGTGTATATCAGCAGGCAAAT 57.120 32.000 0.00 0.00 0.00 2.32
3906 4026 7.496529 TTAAGTGTATATCAGCAGGCAAATC 57.503 36.000 0.00 0.00 0.00 2.17
3907 4027 4.060900 AGTGTATATCAGCAGGCAAATCG 58.939 43.478 0.00 0.00 0.00 3.34
3908 4028 4.058124 GTGTATATCAGCAGGCAAATCGA 58.942 43.478 0.00 0.00 0.00 3.59
3909 4029 4.511454 GTGTATATCAGCAGGCAAATCGAA 59.489 41.667 0.00 0.00 0.00 3.71
3910 4030 5.180117 GTGTATATCAGCAGGCAAATCGAAT 59.820 40.000 0.00 0.00 0.00 3.34
3911 4031 4.761235 ATATCAGCAGGCAAATCGAATG 57.239 40.909 0.00 0.00 0.00 2.67
3912 4032 1.825090 TCAGCAGGCAAATCGAATGT 58.175 45.000 0.00 0.00 0.00 2.71
3913 4033 2.984562 TCAGCAGGCAAATCGAATGTA 58.015 42.857 0.00 0.00 0.00 2.29
3914 4034 2.938451 TCAGCAGGCAAATCGAATGTAG 59.062 45.455 0.00 0.00 0.00 2.74
3915 4035 1.672881 AGCAGGCAAATCGAATGTAGC 59.327 47.619 0.00 0.00 0.00 3.58
3916 4036 1.268743 GCAGGCAAATCGAATGTAGCC 60.269 52.381 8.98 8.98 42.31 3.93
3917 4037 1.003545 CAGGCAAATCGAATGTAGCCG 60.004 52.381 10.64 4.55 46.34 5.52
3918 4038 1.134521 AGGCAAATCGAATGTAGCCGA 60.135 47.619 10.64 0.00 46.34 5.54
3919 4039 1.261619 GGCAAATCGAATGTAGCCGAG 59.738 52.381 0.00 0.00 38.25 4.63
3920 4040 1.933853 GCAAATCGAATGTAGCCGAGT 59.066 47.619 0.00 0.00 38.25 4.18
3921 4041 2.351726 GCAAATCGAATGTAGCCGAGTT 59.648 45.455 0.00 0.00 42.56 3.01
3922 4042 3.544244 GCAAATCGAATGTAGCCGAGTTC 60.544 47.826 0.00 0.00 40.38 3.01
3923 4043 2.121116 ATCGAATGTAGCCGAGTTCG 57.879 50.000 0.00 5.79 43.34 3.95
3943 4063 0.729690 GCTTCTTGCCGAGATGTTCC 59.270 55.000 0.00 0.00 33.49 3.62
3944 4064 1.677217 GCTTCTTGCCGAGATGTTCCT 60.677 52.381 0.00 0.00 33.49 3.36
3945 4065 2.704572 CTTCTTGCCGAGATGTTCCTT 58.295 47.619 0.00 0.00 33.49 3.36
3946 4066 2.859165 TCTTGCCGAGATGTTCCTTT 57.141 45.000 0.00 0.00 0.00 3.11
3947 4067 2.699954 TCTTGCCGAGATGTTCCTTTC 58.300 47.619 0.00 0.00 0.00 2.62
3948 4068 2.303022 TCTTGCCGAGATGTTCCTTTCT 59.697 45.455 0.00 0.00 0.00 2.52
3949 4069 3.513912 TCTTGCCGAGATGTTCCTTTCTA 59.486 43.478 0.00 0.00 0.00 2.10
3950 4070 3.526931 TGCCGAGATGTTCCTTTCTAG 57.473 47.619 0.00 0.00 0.00 2.43
3951 4071 3.096852 TGCCGAGATGTTCCTTTCTAGA 58.903 45.455 0.00 0.00 0.00 2.43
3952 4072 3.706594 TGCCGAGATGTTCCTTTCTAGAT 59.293 43.478 0.00 0.00 0.00 1.98
3953 4073 4.162320 TGCCGAGATGTTCCTTTCTAGATT 59.838 41.667 0.00 0.00 0.00 2.40
3954 4074 4.509600 GCCGAGATGTTCCTTTCTAGATTG 59.490 45.833 0.00 0.00 0.00 2.67
3955 4075 5.682471 GCCGAGATGTTCCTTTCTAGATTGA 60.682 44.000 0.00 0.00 0.00 2.57
3956 4076 6.520272 CCGAGATGTTCCTTTCTAGATTGAT 58.480 40.000 0.00 0.00 0.00 2.57
3957 4077 6.989169 CCGAGATGTTCCTTTCTAGATTGATT 59.011 38.462 0.00 0.00 0.00 2.57
3958 4078 7.497249 CCGAGATGTTCCTTTCTAGATTGATTT 59.503 37.037 0.00 0.00 0.00 2.17
3959 4079 8.333908 CGAGATGTTCCTTTCTAGATTGATTTG 58.666 37.037 0.00 0.00 0.00 2.32
3960 4080 9.388506 GAGATGTTCCTTTCTAGATTGATTTGA 57.611 33.333 0.00 0.00 0.00 2.69
3961 4081 9.917887 AGATGTTCCTTTCTAGATTGATTTGAT 57.082 29.630 0.00 0.00 0.00 2.57
3963 4083 9.917887 ATGTTCCTTTCTAGATTGATTTGATCT 57.082 29.630 0.00 0.00 37.59 2.75
3964 4084 9.745018 TGTTCCTTTCTAGATTGATTTGATCTT 57.255 29.630 0.00 0.00 35.56 2.40
3966 4086 9.964354 TTCCTTTCTAGATTGATTTGATCTTGA 57.036 29.630 0.00 0.00 34.91 3.02
3967 4087 9.388506 TCCTTTCTAGATTGATTTGATCTTGAC 57.611 33.333 0.00 0.00 35.92 3.18
3968 4088 9.393512 CCTTTCTAGATTGATTTGATCTTGACT 57.606 33.333 0.00 0.00 35.92 3.41
3970 4090 8.640091 TTCTAGATTGATTTGATCTTGACTCG 57.360 34.615 0.00 0.00 35.92 4.18
3971 4091 7.205992 TCTAGATTGATTTGATCTTGACTCGG 58.794 38.462 0.00 0.00 35.56 4.63
3972 4092 5.982356 AGATTGATTTGATCTTGACTCGGA 58.018 37.500 0.00 0.00 29.77 4.55
3973 4093 6.409704 AGATTGATTTGATCTTGACTCGGAA 58.590 36.000 0.00 0.00 29.77 4.30
3974 4094 6.538021 AGATTGATTTGATCTTGACTCGGAAG 59.462 38.462 0.00 0.00 29.77 3.46
3975 4095 3.935203 TGATTTGATCTTGACTCGGAAGC 59.065 43.478 0.00 0.00 0.00 3.86
3976 4096 3.685139 TTTGATCTTGACTCGGAAGCT 57.315 42.857 0.00 0.00 0.00 3.74
3977 4097 3.685139 TTGATCTTGACTCGGAAGCTT 57.315 42.857 0.00 0.00 0.00 3.74
3978 4098 3.238108 TGATCTTGACTCGGAAGCTTC 57.762 47.619 18.54 18.54 0.00 3.86
3979 4099 2.093973 TGATCTTGACTCGGAAGCTTCC 60.094 50.000 32.12 32.12 44.05 3.46
3980 4100 0.608640 TCTTGACTCGGAAGCTTCCC 59.391 55.000 34.54 22.74 44.67 3.97
3981 4101 0.737715 CTTGACTCGGAAGCTTCCCG 60.738 60.000 34.54 28.31 44.67 5.14
3982 4102 1.469335 TTGACTCGGAAGCTTCCCGT 61.469 55.000 34.54 30.20 46.53 5.28
3983 4103 0.609957 TGACTCGGAAGCTTCCCGTA 60.610 55.000 34.54 21.21 46.53 4.02
3984 4104 0.179142 GACTCGGAAGCTTCCCGTAC 60.179 60.000 34.54 21.40 46.53 3.67
3985 4105 1.226603 CTCGGAAGCTTCCCGTACG 60.227 63.158 34.54 23.77 46.53 3.67
3986 4106 1.651240 CTCGGAAGCTTCCCGTACGA 61.651 60.000 34.54 26.15 46.53 3.43
3987 4107 1.033746 TCGGAAGCTTCCCGTACGAT 61.034 55.000 34.54 0.00 46.53 3.73
3988 4108 0.870307 CGGAAGCTTCCCGTACGATG 60.870 60.000 34.54 17.35 44.67 3.84
3989 4109 1.152383 GGAAGCTTCCCGTACGATGC 61.152 60.000 31.91 14.31 41.62 3.91
3990 4110 0.179108 GAAGCTTCCCGTACGATGCT 60.179 55.000 18.76 16.27 43.08 3.79
3991 4111 0.249398 AAGCTTCCCGTACGATGCTT 59.751 50.000 18.76 20.66 44.17 3.91
3992 4112 0.460284 AGCTTCCCGTACGATGCTTG 60.460 55.000 18.76 0.00 39.50 4.01
3993 4113 1.429148 GCTTCCCGTACGATGCTTGG 61.429 60.000 18.76 8.32 31.88 3.61
3994 4114 0.810031 CTTCCCGTACGATGCTTGGG 60.810 60.000 18.76 7.52 41.43 4.12
3995 4115 1.546589 TTCCCGTACGATGCTTGGGT 61.547 55.000 18.76 0.00 40.86 4.51
3996 4116 1.520787 CCCGTACGATGCTTGGGTC 60.521 63.158 18.76 0.00 35.05 4.46
3997 4117 1.515954 CCGTACGATGCTTGGGTCT 59.484 57.895 18.76 0.00 0.00 3.85
3998 4118 0.108329 CCGTACGATGCTTGGGTCTT 60.108 55.000 18.76 0.00 0.00 3.01
3999 4119 0.999406 CGTACGATGCTTGGGTCTTG 59.001 55.000 10.44 0.00 0.00 3.02
4000 4120 1.671850 CGTACGATGCTTGGGTCTTGT 60.672 52.381 10.44 0.00 0.00 3.16
4001 4121 2.000447 GTACGATGCTTGGGTCTTGTC 59.000 52.381 0.00 0.00 0.00 3.18
4002 4122 0.687354 ACGATGCTTGGGTCTTGTCT 59.313 50.000 0.00 0.00 0.00 3.41
4003 4123 1.338200 ACGATGCTTGGGTCTTGTCTC 60.338 52.381 0.00 0.00 0.00 3.36
4004 4124 1.743996 GATGCTTGGGTCTTGTCTCC 58.256 55.000 0.00 0.00 0.00 3.71
4005 4125 1.280421 GATGCTTGGGTCTTGTCTCCT 59.720 52.381 0.00 0.00 0.00 3.69
4006 4126 0.687354 TGCTTGGGTCTTGTCTCCTC 59.313 55.000 0.00 0.00 0.00 3.71
4007 4127 0.390472 GCTTGGGTCTTGTCTCCTCG 60.390 60.000 0.00 0.00 0.00 4.63
4008 4128 0.969894 CTTGGGTCTTGTCTCCTCGT 59.030 55.000 0.00 0.00 0.00 4.18
4009 4129 0.679505 TTGGGTCTTGTCTCCTCGTG 59.320 55.000 0.00 0.00 0.00 4.35
4010 4130 0.469331 TGGGTCTTGTCTCCTCGTGT 60.469 55.000 0.00 0.00 0.00 4.49
4011 4131 0.244178 GGGTCTTGTCTCCTCGTGTC 59.756 60.000 0.00 0.00 0.00 3.67
4012 4132 0.959553 GGTCTTGTCTCCTCGTGTCA 59.040 55.000 0.00 0.00 0.00 3.58
4013 4133 1.068194 GGTCTTGTCTCCTCGTGTCAG 60.068 57.143 0.00 0.00 0.00 3.51
4014 4134 1.609555 GTCTTGTCTCCTCGTGTCAGT 59.390 52.381 0.00 0.00 0.00 3.41
4015 4135 1.880675 TCTTGTCTCCTCGTGTCAGTC 59.119 52.381 0.00 0.00 0.00 3.51
4016 4136 1.883275 CTTGTCTCCTCGTGTCAGTCT 59.117 52.381 0.00 0.00 0.00 3.24
4017 4137 1.982660 TGTCTCCTCGTGTCAGTCTT 58.017 50.000 0.00 0.00 0.00 3.01
4018 4138 3.136009 TGTCTCCTCGTGTCAGTCTTA 57.864 47.619 0.00 0.00 0.00 2.10
4019 4139 3.687125 TGTCTCCTCGTGTCAGTCTTAT 58.313 45.455 0.00 0.00 0.00 1.73
4020 4140 4.840271 TGTCTCCTCGTGTCAGTCTTATA 58.160 43.478 0.00 0.00 0.00 0.98
4021 4141 5.437946 TGTCTCCTCGTGTCAGTCTTATAT 58.562 41.667 0.00 0.00 0.00 0.86
4022 4142 5.886474 TGTCTCCTCGTGTCAGTCTTATATT 59.114 40.000 0.00 0.00 0.00 1.28
4023 4143 7.052248 TGTCTCCTCGTGTCAGTCTTATATTA 58.948 38.462 0.00 0.00 0.00 0.98
4024 4144 7.720074 TGTCTCCTCGTGTCAGTCTTATATTAT 59.280 37.037 0.00 0.00 0.00 1.28
4025 4145 8.018520 GTCTCCTCGTGTCAGTCTTATATTATG 58.981 40.741 0.00 0.00 0.00 1.90
4026 4146 7.937394 TCTCCTCGTGTCAGTCTTATATTATGA 59.063 37.037 0.00 0.00 0.00 2.15
4027 4147 8.100508 TCCTCGTGTCAGTCTTATATTATGAG 57.899 38.462 0.00 0.00 0.00 2.90
4028 4148 7.937394 TCCTCGTGTCAGTCTTATATTATGAGA 59.063 37.037 0.00 0.00 0.00 3.27
4029 4149 8.018520 CCTCGTGTCAGTCTTATATTATGAGAC 58.981 40.741 16.83 16.83 43.84 3.36
4030 4150 7.768220 CGTGTCAGTCTTATATTATGAGACG 57.232 40.000 17.91 14.16 46.84 4.18
4032 4152 7.872881 GTGTCAGTCTTATATTATGAGACGGA 58.127 38.462 20.02 20.02 46.84 4.69
4033 4153 8.018520 GTGTCAGTCTTATATTATGAGACGGAG 58.981 40.741 22.64 16.04 45.39 4.63
4034 4154 7.937394 TGTCAGTCTTATATTATGAGACGGAGA 59.063 37.037 22.64 20.18 45.39 3.71
4035 4155 8.447833 GTCAGTCTTATATTATGAGACGGAGAG 58.552 40.741 22.64 12.70 45.39 3.20
4036 4156 8.376270 TCAGTCTTATATTATGAGACGGAGAGA 58.624 37.037 20.02 12.83 46.84 3.10
4037 4157 8.664798 CAGTCTTATATTATGAGACGGAGAGAG 58.335 40.741 17.89 5.23 46.84 3.20
4038 4158 8.380099 AGTCTTATATTATGAGACGGAGAGAGT 58.620 37.037 17.91 1.69 46.84 3.24
4039 4159 9.656040 GTCTTATATTATGAGACGGAGAGAGTA 57.344 37.037 11.50 0.00 36.39 2.59
4045 4165 7.925043 TTATGAGACGGAGAGAGTATTATCC 57.075 40.000 0.00 0.00 0.00 2.59
4046 4166 5.306114 TGAGACGGAGAGAGTATTATCCA 57.694 43.478 0.00 0.00 0.00 3.41
4047 4167 5.309638 TGAGACGGAGAGAGTATTATCCAG 58.690 45.833 0.00 0.00 0.00 3.86
4048 4168 5.071923 TGAGACGGAGAGAGTATTATCCAGA 59.928 44.000 0.00 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.295792 GAAATATGGCGTCGGAGCAA 58.704 50.000 5.49 0.00 39.27 3.91
1 2 0.874175 CGAAATATGGCGTCGGAGCA 60.874 55.000 5.49 0.00 39.27 4.26
2 3 0.874607 ACGAAATATGGCGTCGGAGC 60.875 55.000 0.00 0.00 39.07 4.70
5 6 1.257936 CTCAACGAAATATGGCGTCGG 59.742 52.381 3.93 1.31 40.23 4.79
6 7 1.257936 CCTCAACGAAATATGGCGTCG 59.742 52.381 3.93 0.00 40.23 5.12
7 8 1.003866 GCCTCAACGAAATATGGCGTC 60.004 52.381 3.93 0.00 40.23 5.19
8 9 1.014352 GCCTCAACGAAATATGGCGT 58.986 50.000 0.00 0.00 43.39 5.68
9 10 1.013596 TGCCTCAACGAAATATGGCG 58.986 50.000 0.00 0.00 42.87 5.69
10 11 3.715628 ATTGCCTCAACGAAATATGGC 57.284 42.857 0.00 0.00 40.62 4.40
11 12 6.795399 AGTTTATTGCCTCAACGAAATATGG 58.205 36.000 0.00 0.00 0.00 2.74
12 13 8.070171 CCTAGTTTATTGCCTCAACGAAATATG 58.930 37.037 0.00 0.00 0.00 1.78
13 14 7.773690 ACCTAGTTTATTGCCTCAACGAAATAT 59.226 33.333 0.00 0.00 0.00 1.28
14 15 7.107542 ACCTAGTTTATTGCCTCAACGAAATA 58.892 34.615 0.00 0.00 0.00 1.40
15 16 5.944007 ACCTAGTTTATTGCCTCAACGAAAT 59.056 36.000 0.00 0.00 0.00 2.17
16 17 5.310451 ACCTAGTTTATTGCCTCAACGAAA 58.690 37.500 0.00 0.00 0.00 3.46
17 18 4.901868 ACCTAGTTTATTGCCTCAACGAA 58.098 39.130 0.00 0.00 0.00 3.85
18 19 4.546829 ACCTAGTTTATTGCCTCAACGA 57.453 40.909 0.00 0.00 0.00 3.85
19 20 4.270325 GCTACCTAGTTTATTGCCTCAACG 59.730 45.833 0.00 0.00 0.00 4.10
20 21 4.575236 GGCTACCTAGTTTATTGCCTCAAC 59.425 45.833 0.00 0.00 36.32 3.18
21 22 4.226394 TGGCTACCTAGTTTATTGCCTCAA 59.774 41.667 0.00 0.00 39.57 3.02
22 23 3.778075 TGGCTACCTAGTTTATTGCCTCA 59.222 43.478 0.00 0.00 39.57 3.86
23 24 4.127907 GTGGCTACCTAGTTTATTGCCTC 58.872 47.826 0.00 0.00 39.57 4.70
24 25 3.780850 AGTGGCTACCTAGTTTATTGCCT 59.219 43.478 0.00 0.00 39.57 4.75
25 26 3.877508 CAGTGGCTACCTAGTTTATTGCC 59.122 47.826 0.00 0.00 39.33 4.52
26 27 4.514401 ACAGTGGCTACCTAGTTTATTGC 58.486 43.478 0.00 0.00 0.00 3.56
27 28 6.875076 AGTACAGTGGCTACCTAGTTTATTG 58.125 40.000 0.00 0.00 0.00 1.90
28 29 7.492077 AAGTACAGTGGCTACCTAGTTTATT 57.508 36.000 0.00 0.00 0.00 1.40
29 30 7.492077 AAAGTACAGTGGCTACCTAGTTTAT 57.508 36.000 0.00 0.00 0.00 1.40
30 31 6.923199 AAAGTACAGTGGCTACCTAGTTTA 57.077 37.500 0.00 0.00 0.00 2.01
31 32 5.820404 AAAGTACAGTGGCTACCTAGTTT 57.180 39.130 0.00 0.00 0.00 2.66
32 33 5.548406 CAAAAGTACAGTGGCTACCTAGTT 58.452 41.667 0.00 0.00 0.00 2.24
33 34 4.562963 GCAAAAGTACAGTGGCTACCTAGT 60.563 45.833 0.00 0.00 0.00 2.57
34 35 3.933332 GCAAAAGTACAGTGGCTACCTAG 59.067 47.826 0.00 0.00 0.00 3.02
35 36 3.325425 TGCAAAAGTACAGTGGCTACCTA 59.675 43.478 0.00 0.00 0.00 3.08
36 37 2.105821 TGCAAAAGTACAGTGGCTACCT 59.894 45.455 0.00 0.00 0.00 3.08
37 38 2.500229 TGCAAAAGTACAGTGGCTACC 58.500 47.619 0.00 0.00 0.00 3.18
38 39 3.670627 GCATGCAAAAGTACAGTGGCTAC 60.671 47.826 14.21 0.00 0.00 3.58
39 40 2.487762 GCATGCAAAAGTACAGTGGCTA 59.512 45.455 14.21 0.00 0.00 3.93
40 41 1.270550 GCATGCAAAAGTACAGTGGCT 59.729 47.619 14.21 0.00 0.00 4.75
41 42 1.701704 GCATGCAAAAGTACAGTGGC 58.298 50.000 14.21 0.00 0.00 5.01
42 43 1.535028 TCGCATGCAAAAGTACAGTGG 59.465 47.619 19.57 0.00 0.00 4.00
43 44 2.413239 CCTCGCATGCAAAAGTACAGTG 60.413 50.000 19.57 0.00 0.00 3.66
44 45 1.806542 CCTCGCATGCAAAAGTACAGT 59.193 47.619 19.57 0.00 0.00 3.55
45 46 1.466360 GCCTCGCATGCAAAAGTACAG 60.466 52.381 19.57 0.00 0.00 2.74
46 47 0.521291 GCCTCGCATGCAAAAGTACA 59.479 50.000 19.57 0.00 0.00 2.90
47 48 0.521291 TGCCTCGCATGCAAAAGTAC 59.479 50.000 19.57 6.75 35.40 2.73
48 49 0.521291 GTGCCTCGCATGCAAAAGTA 59.479 50.000 19.57 0.00 41.91 2.24
49 50 1.286880 GTGCCTCGCATGCAAAAGT 59.713 52.632 19.57 0.00 41.91 2.66
50 51 1.444895 GGTGCCTCGCATGCAAAAG 60.445 57.895 19.57 11.35 41.91 2.27
51 52 2.198969 TGGTGCCTCGCATGCAAAA 61.199 52.632 19.57 1.03 41.91 2.44
52 53 2.596923 TGGTGCCTCGCATGCAAA 60.597 55.556 19.57 3.85 41.91 3.68
53 54 3.364441 GTGGTGCCTCGCATGCAA 61.364 61.111 19.57 0.00 41.91 4.08
65 66 3.991051 AGTGTCTCGCCGGTGGTG 61.991 66.667 16.49 8.86 33.99 4.17
66 67 3.991051 CAGTGTCTCGCCGGTGGT 61.991 66.667 16.49 0.00 0.00 4.16
68 69 3.865929 AAGCAGTGTCTCGCCGGTG 62.866 63.158 9.28 9.28 0.00 4.94
69 70 3.165160 AAAGCAGTGTCTCGCCGGT 62.165 57.895 1.90 0.00 0.00 5.28
70 71 2.357517 AAAGCAGTGTCTCGCCGG 60.358 61.111 0.00 0.00 0.00 6.13
71 72 1.621301 CTCAAAGCAGTGTCTCGCCG 61.621 60.000 0.00 0.00 0.00 6.46
72 73 1.905922 GCTCAAAGCAGTGTCTCGCC 61.906 60.000 0.00 0.00 41.89 5.54
73 74 0.948141 AGCTCAAAGCAGTGTCTCGC 60.948 55.000 1.29 0.00 45.56 5.03
74 75 0.788995 CAGCTCAAAGCAGTGTCTCG 59.211 55.000 1.29 0.00 45.56 4.04
75 76 2.160822 TCAGCTCAAAGCAGTGTCTC 57.839 50.000 1.29 0.00 45.56 3.36
76 77 2.855209 ATCAGCTCAAAGCAGTGTCT 57.145 45.000 1.29 0.00 45.56 3.41
77 78 6.857777 AATATATCAGCTCAAAGCAGTGTC 57.142 37.500 1.29 0.00 45.56 3.67
78 79 7.504403 AGTAATATATCAGCTCAAAGCAGTGT 58.496 34.615 1.29 0.00 45.56 3.55
79 80 7.959689 AGTAATATATCAGCTCAAAGCAGTG 57.040 36.000 1.29 0.00 45.56 3.66
80 81 8.865090 ACTAGTAATATATCAGCTCAAAGCAGT 58.135 33.333 0.00 0.00 45.56 4.40
81 82 9.703892 AACTAGTAATATATCAGCTCAAAGCAG 57.296 33.333 0.00 0.00 45.56 4.24
96 97 8.743714 GCCCACCTACGTATAAACTAGTAATAT 58.256 37.037 0.00 1.05 0.00 1.28
97 98 7.176690 GGCCCACCTACGTATAAACTAGTAATA 59.823 40.741 0.00 0.00 0.00 0.98
98 99 6.015095 GGCCCACCTACGTATAAACTAGTAAT 60.015 42.308 0.00 0.00 0.00 1.89
99 100 5.301805 GGCCCACCTACGTATAAACTAGTAA 59.698 44.000 0.00 0.00 0.00 2.24
100 101 4.827284 GGCCCACCTACGTATAAACTAGTA 59.173 45.833 0.00 0.00 0.00 1.82
101 102 3.638627 GGCCCACCTACGTATAAACTAGT 59.361 47.826 0.00 0.00 0.00 2.57
102 103 3.638160 TGGCCCACCTACGTATAAACTAG 59.362 47.826 0.00 0.00 36.63 2.57
103 104 3.638160 CTGGCCCACCTACGTATAAACTA 59.362 47.826 0.00 0.00 36.63 2.24
104 105 2.433239 CTGGCCCACCTACGTATAAACT 59.567 50.000 0.00 0.00 36.63 2.66
105 106 2.431782 TCTGGCCCACCTACGTATAAAC 59.568 50.000 0.00 0.00 36.63 2.01
106 107 2.696707 CTCTGGCCCACCTACGTATAAA 59.303 50.000 0.00 0.00 36.63 1.40
107 108 2.313317 CTCTGGCCCACCTACGTATAA 58.687 52.381 0.00 0.00 36.63 0.98
108 109 1.479942 CCTCTGGCCCACCTACGTATA 60.480 57.143 0.00 0.00 36.63 1.47
109 110 0.759436 CCTCTGGCCCACCTACGTAT 60.759 60.000 0.00 0.00 36.63 3.06
110 111 1.380785 CCTCTGGCCCACCTACGTA 60.381 63.158 0.00 0.00 36.63 3.57
111 112 2.683933 CCTCTGGCCCACCTACGT 60.684 66.667 0.00 0.00 36.63 3.57
112 113 2.683933 ACCTCTGGCCCACCTACG 60.684 66.667 0.00 0.00 36.63 3.51
113 114 2.670148 CCACCTCTGGCCCACCTAC 61.670 68.421 0.00 0.00 36.63 3.18
114 115 2.285368 CCACCTCTGGCCCACCTA 60.285 66.667 0.00 0.00 36.63 3.08
117 118 4.351054 CACCCACCTCTGGCCCAC 62.351 72.222 0.00 0.00 36.00 4.61
121 122 4.351054 CACCCACCCACCTCTGGC 62.351 72.222 0.00 0.00 36.00 4.85
122 123 4.351054 GCACCCACCCACCTCTGG 62.351 72.222 0.00 0.00 37.29 3.86
123 124 4.351054 GGCACCCACCCACCTCTG 62.351 72.222 0.00 0.00 0.00 3.35
124 125 4.918360 TGGCACCCACCCACCTCT 62.918 66.667 0.00 0.00 0.00 3.69
125 126 2.730129 ATTTGGCACCCACCCACCTC 62.730 60.000 0.00 0.00 30.78 3.85
126 127 2.730129 GATTTGGCACCCACCCACCT 62.730 60.000 0.00 0.00 30.78 4.00
127 128 2.203773 ATTTGGCACCCACCCACC 60.204 61.111 0.00 0.00 30.78 4.61
128 129 2.282783 GGATTTGGCACCCACCCAC 61.283 63.158 0.00 0.00 30.78 4.61
129 130 2.029892 AAGGATTTGGCACCCACCCA 62.030 55.000 0.00 0.00 30.78 4.51
130 131 1.229177 AAGGATTTGGCACCCACCC 60.229 57.895 0.00 0.00 30.78 4.61
131 132 0.541764 TGAAGGATTTGGCACCCACC 60.542 55.000 0.00 0.00 30.78 4.61
132 133 0.603065 GTGAAGGATTTGGCACCCAC 59.397 55.000 0.00 0.00 30.78 4.61
133 134 0.893270 CGTGAAGGATTTGGCACCCA 60.893 55.000 0.00 0.00 0.00 4.51
134 135 0.893727 ACGTGAAGGATTTGGCACCC 60.894 55.000 0.00 0.00 0.00 4.61
135 136 0.958822 AACGTGAAGGATTTGGCACC 59.041 50.000 0.00 0.00 0.00 5.01
136 137 1.336755 ACAACGTGAAGGATTTGGCAC 59.663 47.619 0.00 0.00 0.00 5.01
137 138 1.336440 CACAACGTGAAGGATTTGGCA 59.664 47.619 0.00 0.00 35.23 4.92
138 139 1.335872 CCACAACGTGAAGGATTTGGC 60.336 52.381 0.00 0.00 35.23 4.52
139 140 1.953686 ACCACAACGTGAAGGATTTGG 59.046 47.619 7.34 0.00 35.23 3.28
140 141 2.858260 GCACCACAACGTGAAGGATTTG 60.858 50.000 7.34 0.00 35.23 2.32
141 142 1.336755 GCACCACAACGTGAAGGATTT 59.663 47.619 7.34 0.00 35.23 2.17
142 143 0.951558 GCACCACAACGTGAAGGATT 59.048 50.000 7.34 0.00 35.23 3.01
143 144 0.889186 GGCACCACAACGTGAAGGAT 60.889 55.000 7.34 0.00 35.23 3.24
144 145 1.525077 GGCACCACAACGTGAAGGA 60.525 57.895 7.34 0.00 35.23 3.36
145 146 2.892334 CGGCACCACAACGTGAAGG 61.892 63.158 0.00 0.00 35.23 3.46
146 147 2.631428 CGGCACCACAACGTGAAG 59.369 61.111 0.00 0.00 35.23 3.02
147 148 2.897846 CCGGCACCACAACGTGAA 60.898 61.111 0.00 0.00 35.23 3.18
148 149 4.164087 ACCGGCACCACAACGTGA 62.164 61.111 0.00 0.00 35.23 4.35
149 150 3.947841 CACCGGCACCACAACGTG 61.948 66.667 0.00 0.00 36.80 4.49
152 153 1.448922 TTTAGCACCGGCACCACAAC 61.449 55.000 0.00 0.00 44.61 3.32
153 154 1.152943 TTTAGCACCGGCACCACAA 60.153 52.632 0.00 0.00 44.61 3.33
154 155 1.894756 GTTTAGCACCGGCACCACA 60.895 57.895 0.00 0.00 44.61 4.17
155 156 1.170290 AAGTTTAGCACCGGCACCAC 61.170 55.000 0.00 0.00 44.61 4.16
156 157 0.466555 AAAGTTTAGCACCGGCACCA 60.467 50.000 0.00 0.00 44.61 4.17
157 158 0.671796 AAAAGTTTAGCACCGGCACC 59.328 50.000 0.00 0.00 44.61 5.01
158 159 2.502213 AAAAAGTTTAGCACCGGCAC 57.498 45.000 0.00 0.00 44.61 5.01
159 160 6.518208 AATATAAAAAGTTTAGCACCGGCA 57.482 33.333 0.00 0.00 44.61 5.69
160 161 6.254804 CCAAATATAAAAAGTTTAGCACCGGC 59.745 38.462 0.00 0.00 41.61 6.13
161 162 6.254804 GCCAAATATAAAAAGTTTAGCACCGG 59.745 38.462 0.00 0.00 0.00 5.28
162 163 6.809196 TGCCAAATATAAAAAGTTTAGCACCG 59.191 34.615 0.00 0.00 27.53 4.94
163 164 8.716646 ATGCCAAATATAAAAAGTTTAGCACC 57.283 30.769 0.00 0.00 33.61 5.01
164 165 8.531530 CGATGCCAAATATAAAAAGTTTAGCAC 58.468 33.333 0.00 0.00 33.61 4.40
165 166 8.462811 TCGATGCCAAATATAAAAAGTTTAGCA 58.537 29.630 0.00 0.00 34.85 3.49
166 167 8.850454 TCGATGCCAAATATAAAAAGTTTAGC 57.150 30.769 0.00 0.00 0.00 3.09
169 170 9.139174 CACTTCGATGCCAAATATAAAAAGTTT 57.861 29.630 0.00 0.00 0.00 2.66
170 171 8.303876 ACACTTCGATGCCAAATATAAAAAGTT 58.696 29.630 0.00 0.00 0.00 2.66
171 172 7.826690 ACACTTCGATGCCAAATATAAAAAGT 58.173 30.769 0.00 0.00 0.00 2.66
172 173 9.950680 ATACACTTCGATGCCAAATATAAAAAG 57.049 29.630 0.00 0.00 0.00 2.27
173 174 9.729023 CATACACTTCGATGCCAAATATAAAAA 57.271 29.630 0.00 0.00 0.00 1.94
174 175 8.898761 ACATACACTTCGATGCCAAATATAAAA 58.101 29.630 0.00 0.00 0.00 1.52
175 176 8.341903 CACATACACTTCGATGCCAAATATAAA 58.658 33.333 0.00 0.00 0.00 1.40
176 177 7.041440 CCACATACACTTCGATGCCAAATATAA 60.041 37.037 0.00 0.00 0.00 0.98
177 178 6.426633 CCACATACACTTCGATGCCAAATATA 59.573 38.462 0.00 0.00 0.00 0.86
178 179 5.239306 CCACATACACTTCGATGCCAAATAT 59.761 40.000 0.00 0.00 0.00 1.28
179 180 4.574421 CCACATACACTTCGATGCCAAATA 59.426 41.667 0.00 0.00 0.00 1.40
180 181 3.378112 CCACATACACTTCGATGCCAAAT 59.622 43.478 0.00 0.00 0.00 2.32
181 182 2.746904 CCACATACACTTCGATGCCAAA 59.253 45.455 0.00 0.00 0.00 3.28
182 183 2.355197 CCACATACACTTCGATGCCAA 58.645 47.619 0.00 0.00 0.00 4.52
183 184 2.011548 GCCACATACACTTCGATGCCA 61.012 52.381 0.00 0.00 0.00 4.92
184 185 0.657840 GCCACATACACTTCGATGCC 59.342 55.000 0.00 0.00 0.00 4.40
185 186 1.368641 TGCCACATACACTTCGATGC 58.631 50.000 0.00 0.00 0.00 3.91
186 187 3.436704 AGTTTGCCACATACACTTCGATG 59.563 43.478 0.00 0.00 0.00 3.84
187 188 3.674997 AGTTTGCCACATACACTTCGAT 58.325 40.909 0.00 0.00 0.00 3.59
188 189 3.120321 AGTTTGCCACATACACTTCGA 57.880 42.857 0.00 0.00 0.00 3.71
189 190 3.896648 AAGTTTGCCACATACACTTCG 57.103 42.857 0.00 0.00 0.00 3.79
190 191 7.995463 TTAAAAAGTTTGCCACATACACTTC 57.005 32.000 0.00 0.00 0.00 3.01
191 192 8.956533 ATTTAAAAAGTTTGCCACATACACTT 57.043 26.923 0.00 0.00 0.00 3.16
192 193 8.956533 AATTTAAAAAGTTTGCCACATACACT 57.043 26.923 0.00 0.00 0.00 3.55
193 194 9.644993 GAAATTTAAAAAGTTTGCCACATACAC 57.355 29.630 0.00 0.00 0.00 2.90
194 195 9.606631 AGAAATTTAAAAAGTTTGCCACATACA 57.393 25.926 0.00 0.00 0.00 2.29
195 196 9.862585 CAGAAATTTAAAAAGTTTGCCACATAC 57.137 29.630 0.00 0.00 0.00 2.39
196 197 9.050601 CCAGAAATTTAAAAAGTTTGCCACATA 57.949 29.630 0.00 0.00 0.00 2.29
197 198 7.468494 GCCAGAAATTTAAAAAGTTTGCCACAT 60.468 33.333 0.00 0.00 0.00 3.21
198 199 6.183360 GCCAGAAATTTAAAAAGTTTGCCACA 60.183 34.615 0.00 0.00 0.00 4.17
199 200 6.183360 TGCCAGAAATTTAAAAAGTTTGCCAC 60.183 34.615 0.00 0.00 0.00 5.01
200 201 5.882557 TGCCAGAAATTTAAAAAGTTTGCCA 59.117 32.000 0.00 0.00 0.00 4.92
201 202 6.198687 GTGCCAGAAATTTAAAAAGTTTGCC 58.801 36.000 0.00 0.00 0.00 4.52
202 203 6.198687 GGTGCCAGAAATTTAAAAAGTTTGC 58.801 36.000 0.00 0.00 0.00 3.68
203 204 6.256757 TCGGTGCCAGAAATTTAAAAAGTTTG 59.743 34.615 0.00 0.00 0.00 2.93
204 205 6.342111 TCGGTGCCAGAAATTTAAAAAGTTT 58.658 32.000 0.00 0.00 0.00 2.66
205 206 5.908341 TCGGTGCCAGAAATTTAAAAAGTT 58.092 33.333 0.00 0.00 0.00 2.66
206 207 5.523438 TCGGTGCCAGAAATTTAAAAAGT 57.477 34.783 0.00 0.00 0.00 2.66
207 208 5.751028 TGTTCGGTGCCAGAAATTTAAAAAG 59.249 36.000 0.00 0.00 0.00 2.27
208 209 5.520649 GTGTTCGGTGCCAGAAATTTAAAAA 59.479 36.000 0.00 0.00 0.00 1.94
209 210 5.044558 GTGTTCGGTGCCAGAAATTTAAAA 58.955 37.500 0.00 0.00 0.00 1.52
210 211 4.098044 TGTGTTCGGTGCCAGAAATTTAAA 59.902 37.500 0.00 0.00 0.00 1.52
211 212 3.632604 TGTGTTCGGTGCCAGAAATTTAA 59.367 39.130 0.00 0.00 0.00 1.52
212 213 3.215151 TGTGTTCGGTGCCAGAAATTTA 58.785 40.909 0.00 0.00 0.00 1.40
213 214 2.028130 TGTGTTCGGTGCCAGAAATTT 58.972 42.857 0.00 0.00 0.00 1.82
214 215 1.686355 TGTGTTCGGTGCCAGAAATT 58.314 45.000 0.00 0.00 0.00 1.82
215 216 1.909700 ATGTGTTCGGTGCCAGAAAT 58.090 45.000 0.00 0.00 0.00 2.17
216 217 2.224426 ACTATGTGTTCGGTGCCAGAAA 60.224 45.455 0.00 0.00 0.00 2.52
217 218 1.346395 ACTATGTGTTCGGTGCCAGAA 59.654 47.619 0.00 0.00 0.00 3.02
218 219 0.973632 ACTATGTGTTCGGTGCCAGA 59.026 50.000 0.00 0.00 0.00 3.86
219 220 1.078709 CACTATGTGTTCGGTGCCAG 58.921 55.000 0.00 0.00 0.00 4.85
220 221 0.321210 CCACTATGTGTTCGGTGCCA 60.321 55.000 0.00 0.00 0.00 4.92
221 222 0.036765 TCCACTATGTGTTCGGTGCC 60.037 55.000 0.00 0.00 0.00 5.01
222 223 1.359848 CTCCACTATGTGTTCGGTGC 58.640 55.000 0.00 0.00 0.00 5.01
223 224 1.405526 CCCTCCACTATGTGTTCGGTG 60.406 57.143 0.00 0.00 0.00 4.94
224 225 0.902531 CCCTCCACTATGTGTTCGGT 59.097 55.000 0.00 0.00 0.00 4.69
225 226 0.462047 GCCCTCCACTATGTGTTCGG 60.462 60.000 0.00 0.00 0.00 4.30
226 227 0.462047 GGCCCTCCACTATGTGTTCG 60.462 60.000 0.00 0.00 0.00 3.95
227 228 0.912486 AGGCCCTCCACTATGTGTTC 59.088 55.000 0.00 0.00 33.74 3.18
228 229 1.372501 AAGGCCCTCCACTATGTGTT 58.627 50.000 0.00 0.00 33.74 3.32
229 230 2.263895 TAAGGCCCTCCACTATGTGT 57.736 50.000 0.00 0.00 33.74 3.72
230 231 2.289072 CGATAAGGCCCTCCACTATGTG 60.289 54.545 0.00 0.00 33.74 3.21
231 232 1.971357 CGATAAGGCCCTCCACTATGT 59.029 52.381 0.00 0.00 33.74 2.29
232 233 1.276421 CCGATAAGGCCCTCCACTATG 59.724 57.143 0.00 0.00 33.74 2.23
233 234 1.132817 ACCGATAAGGCCCTCCACTAT 60.133 52.381 0.00 0.00 46.52 2.12
234 235 0.263765 ACCGATAAGGCCCTCCACTA 59.736 55.000 0.00 0.00 46.52 2.74
235 236 1.003051 ACCGATAAGGCCCTCCACT 59.997 57.895 0.00 0.00 46.52 4.00
236 237 1.146263 CACCGATAAGGCCCTCCAC 59.854 63.158 0.00 0.00 46.52 4.02
237 238 0.912487 AACACCGATAAGGCCCTCCA 60.912 55.000 0.00 0.00 46.52 3.86
238 239 0.255033 AAACACCGATAAGGCCCTCC 59.745 55.000 0.00 0.00 46.52 4.30
239 240 1.664873 GAAACACCGATAAGGCCCTC 58.335 55.000 0.00 0.00 46.52 4.30
240 241 0.255033 GGAAACACCGATAAGGCCCT 59.745 55.000 0.00 0.00 46.52 5.19
241 242 2.789842 GGAAACACCGATAAGGCCC 58.210 57.895 0.00 0.00 46.52 5.80
271 272 0.179078 ATACCAACGGCCGCGAATTA 60.179 50.000 28.58 10.91 0.00 1.40
273 274 1.885850 GATACCAACGGCCGCGAAT 60.886 57.895 28.58 12.09 0.00 3.34
289 290 6.788598 AGTCATCGATGCATATTAGGAGAT 57.211 37.500 20.81 0.00 0.00 2.75
297 298 6.650807 ACGGATAAAAAGTCATCGATGCATAT 59.349 34.615 20.81 11.16 0.00 1.78
347 348 2.593420 GCCTAGGCGGGGCTTTAA 59.407 61.111 20.16 0.00 45.57 1.52
397 413 2.834685 TATGTATCCATCGGCGGAGGC 61.835 57.143 7.21 0.00 38.83 4.70
417 433 3.425659 GGGTGCTGAAATCTTCTTCCTT 58.574 45.455 0.00 0.00 0.00 3.36
432 448 5.760484 ATTACATTTCATTTTGGGGTGCT 57.240 34.783 0.00 0.00 0.00 4.40
445 461 9.150348 CCACCCAGACAAATAAAATTACATTTC 57.850 33.333 0.00 0.00 0.00 2.17
460 476 2.559922 AAACACGCCCACCCAGACAA 62.560 55.000 0.00 0.00 0.00 3.18
462 478 2.203294 AAACACGCCCACCCAGAC 60.203 61.111 0.00 0.00 0.00 3.51
473 489 6.198687 AGTGTCACATGAATTTACAAACACG 58.801 36.000 5.62 0.00 39.44 4.49
505 555 3.708563 TTTTCAAAAGGCTCAAGACCG 57.291 42.857 0.00 0.00 0.00 4.79
528 578 7.215755 GGTTCGCTTTATCTACAATTCGTTTTC 59.784 37.037 0.00 0.00 0.00 2.29
531 581 5.220340 CGGTTCGCTTTATCTACAATTCGTT 60.220 40.000 0.00 0.00 0.00 3.85
533 583 4.317839 CCGGTTCGCTTTATCTACAATTCG 60.318 45.833 0.00 0.00 0.00 3.34
534 584 4.025145 CCCGGTTCGCTTTATCTACAATTC 60.025 45.833 0.00 0.00 0.00 2.17
537 587 2.896168 CCCGGTTCGCTTTATCTACAA 58.104 47.619 0.00 0.00 0.00 2.41
567 617 4.762251 GGTGTTTGCCAAGTTTCTCTCTAT 59.238 41.667 0.00 0.00 0.00 1.98
700 753 0.586802 GTGGATAAAATCGCGAGGGC 59.413 55.000 16.66 0.11 0.00 5.19
728 781 3.862124 CGAAGCTCCGTTGGTGAG 58.138 61.111 0.00 0.00 0.00 3.51
1182 1236 2.403378 CGGGCATTTACACCACCGG 61.403 63.158 0.00 0.00 37.80 5.28
1335 1389 1.488393 GAGGCCTGAAACCTGATAGCT 59.512 52.381 12.00 0.00 37.77 3.32
1394 1448 2.510238 CAGCTACTCGGGCACTGC 60.510 66.667 0.00 0.00 32.53 4.40
1432 1486 1.085893 CGCAGGCACATGTCAATGTA 58.914 50.000 0.00 0.00 45.50 2.29
1445 1499 1.982073 GCAGGTTCACATACGCAGGC 61.982 60.000 0.00 0.00 0.00 4.85
1446 1500 0.673333 TGCAGGTTCACATACGCAGG 60.673 55.000 0.00 0.00 0.00 4.85
1447 1501 1.155889 TTGCAGGTTCACATACGCAG 58.844 50.000 0.00 0.00 0.00 5.18
1507 1584 7.771183 TGAGTTTCTGCATTATTGGTTTATCC 58.229 34.615 0.00 0.00 0.00 2.59
1683 1760 7.461749 TGTTGTTCTCCCTCTGAAATTAATCT 58.538 34.615 0.00 0.00 0.00 2.40
1684 1761 7.391833 ACTGTTGTTCTCCCTCTGAAATTAATC 59.608 37.037 0.00 0.00 0.00 1.75
1685 1762 7.234355 ACTGTTGTTCTCCCTCTGAAATTAAT 58.766 34.615 0.00 0.00 0.00 1.40
1686 1763 6.601332 ACTGTTGTTCTCCCTCTGAAATTAA 58.399 36.000 0.00 0.00 0.00 1.40
1814 1891 5.846994 CACACATTGTTTGCAAAATATGTGC 59.153 36.000 37.19 20.23 41.15 4.57
1861 1938 4.916183 AGCTCAAAAAGAATCCAGCTAGT 58.084 39.130 0.00 0.00 35.44 2.57
1920 2000 2.421424 GCCACTTGCAGATCTGGTTAAG 59.579 50.000 23.89 14.10 40.77 1.85
2096 2176 3.503748 AGCTTGTAGAACATGGAAACTGC 59.496 43.478 0.00 0.04 0.00 4.40
2125 2205 4.227197 GAGGTAGATTCTCCATTCCCTCA 58.773 47.826 0.00 0.00 37.71 3.86
2267 2347 5.594317 AGAGATACATTGCCCAACCAATAAC 59.406 40.000 0.00 0.00 33.86 1.89
2408 2489 4.487948 CACAAATTGCAGGTAATCCACAG 58.512 43.478 0.00 0.00 35.89 3.66
2580 2694 4.203226 TGTTCAACATGGAGTGCAAAGTA 58.797 39.130 0.00 0.00 0.00 2.24
2772 2887 4.452455 ACTTCACGGAACTGAAAGCTAATG 59.548 41.667 0.00 0.00 37.60 1.90
2806 2921 3.866651 CTCCTCGCTGGGGATAATTATG 58.133 50.000 1.78 0.00 39.16 1.90
2893 3008 1.297968 TCCATTCCAGGAGGCATCAA 58.702 50.000 0.00 0.00 32.77 2.57
2938 3053 5.818136 ATTGGACGGTGAATAATGACTTG 57.182 39.130 0.00 0.00 0.00 3.16
3113 3228 6.877322 TGTACCTGTAAACTATCTTTGCCTTC 59.123 38.462 0.00 0.00 0.00 3.46
3162 3277 7.524912 CAAATAGCATTTCCTATGGATTCTCG 58.475 38.462 0.00 0.00 0.00 4.04
3211 3327 3.568007 CCCGTGGAAACTCTTTCATTTCA 59.432 43.478 0.00 0.00 41.43 2.69
3264 3380 8.306761 TCATACGATTATGCTACATGAAGTCAT 58.693 33.333 0.00 0.00 35.86 3.06
3265 3381 7.595130 GTCATACGATTATGCTACATGAAGTCA 59.405 37.037 0.00 0.00 35.86 3.41
3266 3382 7.810282 AGTCATACGATTATGCTACATGAAGTC 59.190 37.037 0.00 0.00 35.86 3.01
3267 3383 7.596621 CAGTCATACGATTATGCTACATGAAGT 59.403 37.037 0.00 0.00 35.86 3.01
3268 3384 7.411264 GCAGTCATACGATTATGCTACATGAAG 60.411 40.741 0.00 0.00 35.86 3.02
3284 3400 1.014825 CGTTTCGCGCAGTCATACG 60.015 57.895 8.75 4.12 0.00 3.06
3329 3445 5.010282 ACATATTCAAACTGAAGGTGTCCC 58.990 41.667 0.00 0.00 40.05 4.46
3367 3483 5.705441 GTGGTGGAGATAACAATCTCAAACA 59.295 40.000 15.28 11.10 43.94 2.83
3437 3553 8.331931 AGTATTTCCTCCACCAAATACATCTA 57.668 34.615 14.05 0.00 43.51 1.98
3600 3719 1.330521 ACACACAGCAACTAACAAGCG 59.669 47.619 0.00 0.00 0.00 4.68
3632 3751 7.965107 GTGAAAGATAAACTACATCAAAGCCTG 59.035 37.037 0.00 0.00 0.00 4.85
3699 3818 5.391843 CGCCACATCACATCTTTTCATGTTA 60.392 40.000 0.00 0.00 34.60 2.41
3749 3868 8.267183 TCTTCTCAGATTGTAGAATATGGCAAA 58.733 33.333 7.31 0.35 32.55 3.68
3789 3908 7.148239 CCAACTTTATTATCTTCTCACCCACAC 60.148 40.741 0.00 0.00 0.00 3.82
3864 3984 6.943146 ACACTTAAAAAGGCCAAAAGGAAAAA 59.057 30.769 5.01 0.00 0.00 1.94
3865 3985 6.477253 ACACTTAAAAAGGCCAAAAGGAAAA 58.523 32.000 5.01 0.00 0.00 2.29
3866 3986 6.056090 ACACTTAAAAAGGCCAAAAGGAAA 57.944 33.333 5.01 0.00 0.00 3.13
3867 3987 5.685520 ACACTTAAAAAGGCCAAAAGGAA 57.314 34.783 5.01 0.00 0.00 3.36
3868 3988 6.987403 ATACACTTAAAAAGGCCAAAAGGA 57.013 33.333 5.01 0.00 0.00 3.36
3869 3989 8.527810 TGATATACACTTAAAAAGGCCAAAAGG 58.472 33.333 5.01 0.00 0.00 3.11
3870 3990 9.573133 CTGATATACACTTAAAAAGGCCAAAAG 57.427 33.333 5.01 3.20 0.00 2.27
3871 3991 8.032451 GCTGATATACACTTAAAAAGGCCAAAA 58.968 33.333 5.01 0.00 0.00 2.44
3872 3992 7.177568 TGCTGATATACACTTAAAAAGGCCAAA 59.822 33.333 5.01 0.00 0.00 3.28
3873 3993 6.661377 TGCTGATATACACTTAAAAAGGCCAA 59.339 34.615 5.01 0.00 0.00 4.52
3874 3994 6.184068 TGCTGATATACACTTAAAAAGGCCA 58.816 36.000 5.01 0.00 0.00 5.36
3875 3995 6.238759 CCTGCTGATATACACTTAAAAAGGCC 60.239 42.308 0.00 0.00 0.00 5.19
3876 3996 6.729187 CCTGCTGATATACACTTAAAAAGGC 58.271 40.000 0.00 0.00 0.00 4.35
3877 3997 6.318648 TGCCTGCTGATATACACTTAAAAAGG 59.681 38.462 0.00 0.00 0.00 3.11
3878 3998 7.320443 TGCCTGCTGATATACACTTAAAAAG 57.680 36.000 0.00 0.00 0.00 2.27
3879 3999 7.695480 TTGCCTGCTGATATACACTTAAAAA 57.305 32.000 0.00 0.00 0.00 1.94
3880 4000 7.695480 TTTGCCTGCTGATATACACTTAAAA 57.305 32.000 0.00 0.00 0.00 1.52
3881 4001 7.254761 CGATTTGCCTGCTGATATACACTTAAA 60.255 37.037 0.00 0.00 0.00 1.52
3882 4002 6.202762 CGATTTGCCTGCTGATATACACTTAA 59.797 38.462 0.00 0.00 0.00 1.85
3883 4003 5.696270 CGATTTGCCTGCTGATATACACTTA 59.304 40.000 0.00 0.00 0.00 2.24
3884 4004 4.512944 CGATTTGCCTGCTGATATACACTT 59.487 41.667 0.00 0.00 0.00 3.16
3885 4005 4.060900 CGATTTGCCTGCTGATATACACT 58.939 43.478 0.00 0.00 0.00 3.55
3886 4006 4.058124 TCGATTTGCCTGCTGATATACAC 58.942 43.478 0.00 0.00 0.00 2.90
3887 4007 4.335400 TCGATTTGCCTGCTGATATACA 57.665 40.909 0.00 0.00 0.00 2.29
3888 4008 5.180117 ACATTCGATTTGCCTGCTGATATAC 59.820 40.000 0.00 0.00 0.00 1.47
3889 4009 5.308014 ACATTCGATTTGCCTGCTGATATA 58.692 37.500 0.00 0.00 0.00 0.86
3890 4010 4.139786 ACATTCGATTTGCCTGCTGATAT 58.860 39.130 0.00 0.00 0.00 1.63
3891 4011 3.544684 ACATTCGATTTGCCTGCTGATA 58.455 40.909 0.00 0.00 0.00 2.15
3892 4012 2.372264 ACATTCGATTTGCCTGCTGAT 58.628 42.857 0.00 0.00 0.00 2.90
3893 4013 1.825090 ACATTCGATTTGCCTGCTGA 58.175 45.000 0.00 0.00 0.00 4.26
3894 4014 2.540361 GCTACATTCGATTTGCCTGCTG 60.540 50.000 0.00 0.00 0.00 4.41
3895 4015 1.672881 GCTACATTCGATTTGCCTGCT 59.327 47.619 0.00 0.00 0.00 4.24
3896 4016 1.268743 GGCTACATTCGATTTGCCTGC 60.269 52.381 7.21 4.52 37.58 4.85
3897 4017 1.003545 CGGCTACATTCGATTTGCCTG 60.004 52.381 11.10 3.95 38.33 4.85
3898 4018 1.134521 TCGGCTACATTCGATTTGCCT 60.135 47.619 11.10 0.00 38.33 4.75
3899 4019 1.261619 CTCGGCTACATTCGATTTGCC 59.738 52.381 0.00 0.00 34.77 4.52
3900 4020 1.933853 ACTCGGCTACATTCGATTTGC 59.066 47.619 0.00 0.00 34.77 3.68
3901 4021 3.301835 CGAACTCGGCTACATTCGATTTG 60.302 47.826 7.61 0.00 45.18 2.32
3902 4022 2.858344 CGAACTCGGCTACATTCGATTT 59.142 45.455 7.61 0.00 45.18 2.17
3903 4023 2.460918 CGAACTCGGCTACATTCGATT 58.539 47.619 7.61 0.00 45.18 3.34
3904 4024 2.121116 CGAACTCGGCTACATTCGAT 57.879 50.000 7.61 0.00 45.18 3.59
3905 4025 3.616935 CGAACTCGGCTACATTCGA 57.383 52.632 7.61 0.00 45.18 3.71
3924 4044 0.729690 GGAACATCTCGGCAAGAAGC 59.270 55.000 0.00 0.00 44.65 3.86
3925 4045 2.393271 AGGAACATCTCGGCAAGAAG 57.607 50.000 0.00 0.00 37.61 2.85
3926 4046 2.859165 AAGGAACATCTCGGCAAGAA 57.141 45.000 0.00 0.00 37.61 2.52
3927 4047 2.303022 AGAAAGGAACATCTCGGCAAGA 59.697 45.455 0.00 0.00 38.72 3.02
3928 4048 2.704572 AGAAAGGAACATCTCGGCAAG 58.295 47.619 0.00 0.00 0.00 4.01
3929 4049 2.859165 AGAAAGGAACATCTCGGCAA 57.141 45.000 0.00 0.00 0.00 4.52
3930 4050 3.096852 TCTAGAAAGGAACATCTCGGCA 58.903 45.455 0.00 0.00 0.00 5.69
3931 4051 3.802948 TCTAGAAAGGAACATCTCGGC 57.197 47.619 0.00 0.00 0.00 5.54
3932 4052 5.907207 TCAATCTAGAAAGGAACATCTCGG 58.093 41.667 0.00 0.00 0.00 4.63
3933 4053 8.333908 CAAATCAATCTAGAAAGGAACATCTCG 58.666 37.037 0.00 0.00 0.00 4.04
3934 4054 9.388506 TCAAATCAATCTAGAAAGGAACATCTC 57.611 33.333 0.00 0.00 0.00 2.75
3935 4055 9.917887 ATCAAATCAATCTAGAAAGGAACATCT 57.082 29.630 0.00 0.00 0.00 2.90
3937 4057 9.917887 AGATCAAATCAATCTAGAAAGGAACAT 57.082 29.630 0.00 0.00 31.71 2.71
3938 4058 9.745018 AAGATCAAATCAATCTAGAAAGGAACA 57.255 29.630 0.00 0.00 33.15 3.18
3940 4060 9.964354 TCAAGATCAAATCAATCTAGAAAGGAA 57.036 29.630 0.00 0.00 33.15 3.36
3941 4061 9.388506 GTCAAGATCAAATCAATCTAGAAAGGA 57.611 33.333 0.00 0.00 33.15 3.36
3942 4062 9.393512 AGTCAAGATCAAATCAATCTAGAAAGG 57.606 33.333 0.00 0.00 33.15 3.11
3944 4064 9.091784 CGAGTCAAGATCAAATCAATCTAGAAA 57.908 33.333 0.00 0.00 33.15 2.52
3945 4065 7.708322 CCGAGTCAAGATCAAATCAATCTAGAA 59.292 37.037 0.00 0.00 33.15 2.10
3946 4066 7.068716 TCCGAGTCAAGATCAAATCAATCTAGA 59.931 37.037 0.00 0.00 33.15 2.43
3947 4067 7.205992 TCCGAGTCAAGATCAAATCAATCTAG 58.794 38.462 0.00 0.00 33.15 2.43
3948 4068 7.112452 TCCGAGTCAAGATCAAATCAATCTA 57.888 36.000 0.00 0.00 33.15 1.98
3949 4069 5.982356 TCCGAGTCAAGATCAAATCAATCT 58.018 37.500 0.00 0.00 34.96 2.40
3950 4070 6.668541 TTCCGAGTCAAGATCAAATCAATC 57.331 37.500 0.00 0.00 0.00 2.67
3951 4071 5.065731 GCTTCCGAGTCAAGATCAAATCAAT 59.934 40.000 0.00 0.00 0.00 2.57
3952 4072 4.393062 GCTTCCGAGTCAAGATCAAATCAA 59.607 41.667 0.00 0.00 0.00 2.57
3953 4073 3.935203 GCTTCCGAGTCAAGATCAAATCA 59.065 43.478 0.00 0.00 0.00 2.57
3954 4074 4.187694 AGCTTCCGAGTCAAGATCAAATC 58.812 43.478 0.00 0.00 0.00 2.17
3955 4075 4.213564 AGCTTCCGAGTCAAGATCAAAT 57.786 40.909 0.00 0.00 0.00 2.32
3956 4076 3.685139 AGCTTCCGAGTCAAGATCAAA 57.315 42.857 0.00 0.00 0.00 2.69
3957 4077 3.589988 GAAGCTTCCGAGTCAAGATCAA 58.410 45.455 15.97 0.00 0.00 2.57
3958 4078 2.093973 GGAAGCTTCCGAGTCAAGATCA 60.094 50.000 29.09 0.00 37.65 2.92
3959 4079 2.545731 GGAAGCTTCCGAGTCAAGATC 58.454 52.381 29.09 2.48 37.65 2.75
3960 4080 2.682155 GGAAGCTTCCGAGTCAAGAT 57.318 50.000 29.09 0.00 37.65 2.40
3970 4090 1.152383 GCATCGTACGGGAAGCTTCC 61.152 60.000 33.67 33.67 46.82 3.46
3971 4091 0.179108 AGCATCGTACGGGAAGCTTC 60.179 55.000 18.54 18.54 37.69 3.86
3972 4092 0.249398 AAGCATCGTACGGGAAGCTT 59.751 50.000 22.21 22.21 43.73 3.74
3973 4093 0.460284 CAAGCATCGTACGGGAAGCT 60.460 55.000 16.52 15.78 42.26 3.74
3974 4094 1.429148 CCAAGCATCGTACGGGAAGC 61.429 60.000 16.52 13.81 0.00 3.86
3975 4095 0.810031 CCCAAGCATCGTACGGGAAG 60.810 60.000 16.52 4.21 39.44 3.46
3976 4096 1.219664 CCCAAGCATCGTACGGGAA 59.780 57.895 16.52 0.00 39.44 3.97
3977 4097 1.952102 GACCCAAGCATCGTACGGGA 61.952 60.000 16.52 0.00 39.44 5.14
3978 4098 1.520787 GACCCAAGCATCGTACGGG 60.521 63.158 16.52 9.15 43.02 5.28
3979 4099 0.108329 AAGACCCAAGCATCGTACGG 60.108 55.000 16.52 0.69 0.00 4.02
3980 4100 0.999406 CAAGACCCAAGCATCGTACG 59.001 55.000 9.53 9.53 0.00 3.67
3981 4101 2.000447 GACAAGACCCAAGCATCGTAC 59.000 52.381 0.00 0.00 0.00 3.67
3982 4102 1.899814 AGACAAGACCCAAGCATCGTA 59.100 47.619 0.00 0.00 0.00 3.43
3983 4103 0.687354 AGACAAGACCCAAGCATCGT 59.313 50.000 0.00 0.00 0.00 3.73
3984 4104 1.363744 GAGACAAGACCCAAGCATCG 58.636 55.000 0.00 0.00 0.00 3.84
3985 4105 1.280421 AGGAGACAAGACCCAAGCATC 59.720 52.381 0.00 0.00 0.00 3.91
3986 4106 1.280421 GAGGAGACAAGACCCAAGCAT 59.720 52.381 0.00 0.00 0.00 3.79
3987 4107 0.687354 GAGGAGACAAGACCCAAGCA 59.313 55.000 0.00 0.00 0.00 3.91
3988 4108 0.390472 CGAGGAGACAAGACCCAAGC 60.390 60.000 0.00 0.00 0.00 4.01
3989 4109 0.969894 ACGAGGAGACAAGACCCAAG 59.030 55.000 0.00 0.00 0.00 3.61
3990 4110 0.679505 CACGAGGAGACAAGACCCAA 59.320 55.000 0.00 0.00 0.00 4.12
3991 4111 0.469331 ACACGAGGAGACAAGACCCA 60.469 55.000 0.00 0.00 0.00 4.51
3992 4112 0.244178 GACACGAGGAGACAAGACCC 59.756 60.000 0.00 0.00 0.00 4.46
3993 4113 0.959553 TGACACGAGGAGACAAGACC 59.040 55.000 0.00 0.00 0.00 3.85
3994 4114 1.609555 ACTGACACGAGGAGACAAGAC 59.390 52.381 0.00 0.00 0.00 3.01
3995 4115 1.880675 GACTGACACGAGGAGACAAGA 59.119 52.381 0.00 0.00 0.00 3.02
3996 4116 1.883275 AGACTGACACGAGGAGACAAG 59.117 52.381 0.00 0.00 0.00 3.16
3997 4117 1.982660 AGACTGACACGAGGAGACAA 58.017 50.000 0.00 0.00 0.00 3.18
3998 4118 1.982660 AAGACTGACACGAGGAGACA 58.017 50.000 0.00 0.00 0.00 3.41
3999 4119 6.380095 AATATAAGACTGACACGAGGAGAC 57.620 41.667 0.00 0.00 0.00 3.36
4000 4120 7.937394 TCATAATATAAGACTGACACGAGGAGA 59.063 37.037 0.00 0.00 0.00 3.71
4001 4121 8.100508 TCATAATATAAGACTGACACGAGGAG 57.899 38.462 0.00 0.00 0.00 3.69
4002 4122 7.937394 TCTCATAATATAAGACTGACACGAGGA 59.063 37.037 0.00 0.00 0.00 3.71
4003 4123 8.018520 GTCTCATAATATAAGACTGACACGAGG 58.981 40.741 0.00 0.00 37.14 4.63
4004 4124 7.742525 CGTCTCATAATATAAGACTGACACGAG 59.257 40.741 2.40 0.00 37.79 4.18
4005 4125 7.307811 CCGTCTCATAATATAAGACTGACACGA 60.308 40.741 2.40 0.00 37.79 4.35
4006 4126 6.797513 CCGTCTCATAATATAAGACTGACACG 59.202 42.308 2.40 0.00 37.79 4.49
4007 4127 7.872881 TCCGTCTCATAATATAAGACTGACAC 58.127 38.462 2.40 0.00 37.79 3.67
4008 4128 7.937394 TCTCCGTCTCATAATATAAGACTGACA 59.063 37.037 2.40 0.00 37.79 3.58
4009 4129 8.325421 TCTCCGTCTCATAATATAAGACTGAC 57.675 38.462 2.40 0.00 37.79 3.51
4010 4130 8.376270 TCTCTCCGTCTCATAATATAAGACTGA 58.624 37.037 2.40 0.66 37.79 3.41
4011 4131 8.554835 TCTCTCCGTCTCATAATATAAGACTG 57.445 38.462 2.40 0.00 37.79 3.51
4012 4132 8.380099 ACTCTCTCCGTCTCATAATATAAGACT 58.620 37.037 2.40 0.00 37.79 3.24
4013 4133 8.556213 ACTCTCTCCGTCTCATAATATAAGAC 57.444 38.462 0.00 0.00 36.82 3.01
4019 4139 9.616156 GGATAATACTCTCTCCGTCTCATAATA 57.384 37.037 0.00 0.00 0.00 0.98
4020 4140 8.110271 TGGATAATACTCTCTCCGTCTCATAAT 58.890 37.037 0.00 0.00 0.00 1.28
4021 4141 7.459234 TGGATAATACTCTCTCCGTCTCATAA 58.541 38.462 0.00 0.00 0.00 1.90
4022 4142 7.017319 TGGATAATACTCTCTCCGTCTCATA 57.983 40.000 0.00 0.00 0.00 2.15
4023 4143 5.882040 TGGATAATACTCTCTCCGTCTCAT 58.118 41.667 0.00 0.00 0.00 2.90
4024 4144 5.071923 TCTGGATAATACTCTCTCCGTCTCA 59.928 44.000 0.00 0.00 0.00 3.27
4025 4145 5.553123 TCTGGATAATACTCTCTCCGTCTC 58.447 45.833 0.00 0.00 0.00 3.36
4026 4146 5.570205 TCTGGATAATACTCTCTCCGTCT 57.430 43.478 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.