Multiple sequence alignment - TraesCS1A01G170600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G170600 chr1A 100.000 4260 0 0 1 4260 305007364 305003105 0.000000e+00 7867.0
1 TraesCS1A01G170600 chr1A 92.562 242 13 4 467 708 474261356 474261120 4.080000e-90 342.0
2 TraesCS1A01G170600 chr1A 90.323 155 15 0 1215 1369 305328851 305328697 2.010000e-48 204.0
3 TraesCS1A01G170600 chr1D 90.000 2120 133 41 687 2757 240596343 240594254 0.000000e+00 2667.0
4 TraesCS1A01G170600 chr1D 89.950 796 39 22 3484 4260 240593325 240592552 0.000000e+00 989.0
5 TraesCS1A01G170600 chr1D 91.458 679 28 16 2750 3407 240594100 240593431 0.000000e+00 905.0
6 TraesCS1A01G170600 chr1D 90.683 161 14 1 1210 1369 240599286 240599126 3.340000e-51 213.0
7 TraesCS1A01G170600 chr1B 92.224 1569 78 26 1807 3359 333626389 333627929 0.000000e+00 2182.0
8 TraesCS1A01G170600 chr1B 89.013 1074 42 24 735 1773 333625356 333626388 0.000000e+00 1260.0
9 TraesCS1A01G170600 chr1B 81.944 504 29 24 3707 4176 333628678 333629153 1.870000e-98 370.0
10 TraesCS1A01G170600 chr1B 90.062 161 15 1 1210 1369 333601679 333601839 1.550000e-49 207.0
11 TraesCS1A01G170600 chr1B 94.231 52 3 0 4176 4227 333629187 333629238 3.530000e-11 80.5
12 TraesCS1A01G170600 chr1B 94.286 35 2 0 347 381 333621922 333621956 2.000000e-03 54.7
13 TraesCS1A01G170600 chr4B 88.092 739 67 6 1614 2340 414458272 414457543 0.000000e+00 857.0
14 TraesCS1A01G170600 chr7A 95.238 231 11 0 460 690 492343063 492342833 2.420000e-97 366.0
15 TraesCS1A01G170600 chr7A 95.890 219 9 0 463 681 129261361 129261579 5.240000e-94 355.0
16 TraesCS1A01G170600 chr7A 92.857 238 11 4 448 681 722444459 722444694 1.470000e-89 340.0
17 TraesCS1A01G170600 chr3A 95.890 219 9 0 463 681 589543521 589543739 5.240000e-94 355.0
18 TraesCS1A01G170600 chr3A 95.000 220 11 0 463 682 523553649 523553868 3.150000e-91 346.0
19 TraesCS1A01G170600 chr4A 95.000 220 11 0 462 681 682026829 682026610 3.150000e-91 346.0
20 TraesCS1A01G170600 chr4A 94.595 222 12 0 460 681 110878992 110878771 1.130000e-90 344.0
21 TraesCS1A01G170600 chr4A 82.301 113 13 7 1231 1339 639196085 639196194 1.630000e-14 91.6
22 TraesCS1A01G170600 chr2A 94.977 219 11 0 463 681 61965809 61965591 1.130000e-90 344.0
23 TraesCS1A01G170600 chr2A 84.038 213 30 4 1233 1443 746775474 746775684 7.220000e-48 202.0
24 TraesCS1A01G170600 chr2D 83.117 231 35 4 1215 1443 616599096 616599324 1.550000e-49 207.0
25 TraesCS1A01G170600 chr2B 90.260 154 15 0 1217 1370 751571424 751571577 7.220000e-48 202.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G170600 chr1A 305003105 305007364 4259 True 7867.00 7867 100.00000 1 4260 1 chr1A.!!$R1 4259
1 TraesCS1A01G170600 chr1D 240592552 240599286 6734 True 1193.50 2667 90.52275 687 4260 4 chr1D.!!$R1 3573
2 TraesCS1A01G170600 chr1B 333621922 333629238 7316 False 789.44 2182 90.33960 347 4227 5 chr1B.!!$F2 3880
3 TraesCS1A01G170600 chr4B 414457543 414458272 729 True 857.00 857 88.09200 1614 2340 1 chr4B.!!$R1 726

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
47 48 0.107654 GGTGTGCAGGGACTATGACC 60.108 60.0 0.00 0.0 36.02 4.02 F
258 259 0.113190 CCCCAAATATGGCTCCCTCC 59.887 60.0 0.00 0.0 46.09 4.30 F
495 651 0.179240 CAGTTTACAGAGCAAGCGCG 60.179 55.0 0.00 0.0 45.49 6.86 F
496 652 0.600255 AGTTTACAGAGCAAGCGCGT 60.600 50.0 8.43 0.0 45.49 6.01 F
1495 7255 0.107654 GGGAATCAGGGGTCAGTTCG 60.108 60.0 0.00 0.0 0.00 3.95 F
3048 9010 0.108019 AGTTCCCGGACAAGGTCAAC 59.892 55.0 0.73 0.0 33.68 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1006 6728 0.171231 GGCTTTCTGATTGCCCGTTC 59.829 55.0 9.44 0.0 40.71 3.95 R
1461 7208 0.774908 TTCCCCCGAAAGTGTCCAAT 59.225 50.0 0.00 0.0 0.00 3.16 R
1478 7225 0.902531 TCCGAACTGACCCCTGATTC 59.097 55.0 0.00 0.0 0.00 2.52 R
2210 8001 1.098050 CCACAAGGTAAGCCTGATGC 58.902 55.0 0.00 0.0 46.33 3.91 R
3138 9100 0.036388 AATGTGCACGGAGTAGGGTG 60.036 55.0 13.13 0.0 41.61 4.61 R
4066 10492 0.181114 TGCGCCAGATAAATGCTCCT 59.819 50.0 4.18 0.0 0.00 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.462021 GAGTCACAGCTAGCTTTATGGG 58.538 50.000 16.46 5.99 0.00 4.00
22 23 1.943340 GTCACAGCTAGCTTTATGGGC 59.057 52.381 16.46 7.20 0.00 5.36
24 25 0.541863 ACAGCTAGCTTTATGGGCGT 59.458 50.000 16.46 4.19 34.52 5.68
25 26 1.065418 ACAGCTAGCTTTATGGGCGTT 60.065 47.619 16.46 0.00 34.52 4.84
26 27 1.331756 CAGCTAGCTTTATGGGCGTTG 59.668 52.381 16.46 0.00 34.52 4.10
27 28 1.065418 AGCTAGCTTTATGGGCGTTGT 60.065 47.619 12.68 0.00 34.52 3.32
32 33 1.243902 CTTTATGGGCGTTGTGGTGT 58.756 50.000 0.00 0.00 0.00 4.16
33 34 0.955178 TTTATGGGCGTTGTGGTGTG 59.045 50.000 0.00 0.00 0.00 3.82
34 35 1.519751 TTATGGGCGTTGTGGTGTGC 61.520 55.000 0.00 0.00 0.00 4.57
35 36 2.682582 TATGGGCGTTGTGGTGTGCA 62.683 55.000 0.00 0.00 0.00 4.57
36 37 3.964875 GGGCGTTGTGGTGTGCAG 61.965 66.667 0.00 0.00 0.00 4.41
37 38 3.964875 GGCGTTGTGGTGTGCAGG 61.965 66.667 0.00 0.00 0.00 4.85
38 39 3.964875 GCGTTGTGGTGTGCAGGG 61.965 66.667 0.00 0.00 0.00 4.45
39 40 2.203139 CGTTGTGGTGTGCAGGGA 60.203 61.111 0.00 0.00 0.00 4.20
40 41 2.542907 CGTTGTGGTGTGCAGGGAC 61.543 63.158 0.00 0.00 0.00 4.46
41 42 1.152963 GTTGTGGTGTGCAGGGACT 60.153 57.895 0.00 0.00 43.88 3.85
43 44 1.064003 TTGTGGTGTGCAGGGACTAT 58.936 50.000 0.00 0.00 36.02 2.12
45 46 0.613260 GTGGTGTGCAGGGACTATGA 59.387 55.000 0.00 0.00 36.02 2.15
47 48 0.107654 GGTGTGCAGGGACTATGACC 60.108 60.000 0.00 0.00 36.02 4.02
49 50 1.279271 GTGTGCAGGGACTATGACCTT 59.721 52.381 0.00 0.00 36.02 3.50
51 52 1.555075 GTGCAGGGACTATGACCTTCA 59.445 52.381 0.00 0.00 36.02 3.02
52 53 2.171448 GTGCAGGGACTATGACCTTCAT 59.829 50.000 0.00 0.00 40.72 2.57
53 54 2.846206 TGCAGGGACTATGACCTTCATT 59.154 45.455 0.00 0.00 38.26 2.57
54 55 3.209410 GCAGGGACTATGACCTTCATTG 58.791 50.000 0.00 0.00 38.26 2.82
56 57 2.780010 AGGGACTATGACCTTCATTGGG 59.220 50.000 0.00 0.00 38.26 4.12
57 58 2.576615 GGACTATGACCTTCATTGGGC 58.423 52.381 0.00 0.00 38.26 5.36
58 59 2.173569 GGACTATGACCTTCATTGGGCT 59.826 50.000 0.00 0.00 38.26 5.19
59 60 3.391296 GGACTATGACCTTCATTGGGCTA 59.609 47.826 0.00 0.00 38.26 3.93
60 61 4.042187 GGACTATGACCTTCATTGGGCTAT 59.958 45.833 0.00 0.00 38.26 2.97
61 62 5.456763 GGACTATGACCTTCATTGGGCTATT 60.457 44.000 0.00 0.00 38.26 1.73
62 63 5.380043 ACTATGACCTTCATTGGGCTATTG 58.620 41.667 0.00 0.00 38.26 1.90
63 64 3.737559 TGACCTTCATTGGGCTATTGT 57.262 42.857 0.00 0.00 35.73 2.71
64 65 4.853468 TGACCTTCATTGGGCTATTGTA 57.147 40.909 0.00 0.00 35.73 2.41
65 66 4.523083 TGACCTTCATTGGGCTATTGTAC 58.477 43.478 0.00 0.00 35.73 2.90
66 67 4.018870 TGACCTTCATTGGGCTATTGTACA 60.019 41.667 0.00 0.00 35.73 2.90
67 68 5.129368 ACCTTCATTGGGCTATTGTACAT 57.871 39.130 0.00 0.00 0.00 2.29
71 72 4.214310 TCATTGGGCTATTGTACATTGGG 58.786 43.478 0.00 0.00 0.00 4.12
72 73 2.065899 TGGGCTATTGTACATTGGGC 57.934 50.000 16.19 16.19 0.00 5.36
73 74 1.286257 TGGGCTATTGTACATTGGGCA 59.714 47.619 22.79 10.91 0.00 5.36
74 75 2.091389 TGGGCTATTGTACATTGGGCAT 60.091 45.455 22.79 5.56 0.00 4.40
75 76 2.297033 GGGCTATTGTACATTGGGCATG 59.703 50.000 22.79 0.00 39.07 4.06
76 77 2.297033 GGCTATTGTACATTGGGCATGG 59.703 50.000 18.57 3.07 37.17 3.66
87 88 3.223226 GGCATGGCCTTCATTGGG 58.777 61.111 8.35 0.00 46.69 4.12
88 89 1.686800 GGCATGGCCTTCATTGGGT 60.687 57.895 8.35 0.00 46.69 4.51
89 90 1.266867 GGCATGGCCTTCATTGGGTT 61.267 55.000 8.35 0.00 46.69 4.11
90 91 1.484038 GCATGGCCTTCATTGGGTTA 58.516 50.000 3.32 0.00 32.92 2.85
91 92 1.136891 GCATGGCCTTCATTGGGTTAC 59.863 52.381 3.32 0.00 32.92 2.50
92 93 2.738743 CATGGCCTTCATTGGGTTACT 58.261 47.619 3.32 0.00 32.92 2.24
93 94 2.990740 TGGCCTTCATTGGGTTACTT 57.009 45.000 3.32 0.00 0.00 2.24
94 95 3.252554 TGGCCTTCATTGGGTTACTTT 57.747 42.857 3.32 0.00 0.00 2.66
95 96 4.390129 TGGCCTTCATTGGGTTACTTTA 57.610 40.909 3.32 0.00 0.00 1.85
97 98 3.128068 GGCCTTCATTGGGTTACTTTACG 59.872 47.826 0.00 0.00 0.00 3.18
98 99 3.754850 GCCTTCATTGGGTTACTTTACGT 59.245 43.478 0.00 0.00 0.00 3.57
100 101 5.243207 CCTTCATTGGGTTACTTTACGTCT 58.757 41.667 0.00 0.00 0.00 4.18
102 103 5.471556 TCATTGGGTTACTTTACGTCTGA 57.528 39.130 0.00 0.00 0.00 3.27
105 106 4.247267 TGGGTTACTTTACGTCTGAGTG 57.753 45.455 0.00 0.00 0.00 3.51
106 107 3.638160 TGGGTTACTTTACGTCTGAGTGT 59.362 43.478 0.00 0.00 0.00 3.55
107 108 3.985925 GGGTTACTTTACGTCTGAGTGTG 59.014 47.826 0.00 0.00 0.00 3.82
108 109 4.500375 GGGTTACTTTACGTCTGAGTGTGT 60.500 45.833 0.00 0.00 0.00 3.72
110 111 3.366440 ACTTTACGTCTGAGTGTGTCC 57.634 47.619 0.00 0.00 0.00 4.02
111 112 2.957006 ACTTTACGTCTGAGTGTGTCCT 59.043 45.455 0.00 0.00 0.00 3.85
112 113 3.383825 ACTTTACGTCTGAGTGTGTCCTT 59.616 43.478 0.00 0.00 0.00 3.36
113 114 3.364889 TTACGTCTGAGTGTGTCCTTG 57.635 47.619 0.00 0.00 0.00 3.61
115 116 1.480954 ACGTCTGAGTGTGTCCTTGTT 59.519 47.619 0.00 0.00 0.00 2.83
116 117 2.691526 ACGTCTGAGTGTGTCCTTGTTA 59.308 45.455 0.00 0.00 0.00 2.41
117 118 3.243434 ACGTCTGAGTGTGTCCTTGTTAG 60.243 47.826 0.00 0.00 0.00 2.34
119 120 2.632996 TCTGAGTGTGTCCTTGTTAGGG 59.367 50.000 0.00 0.00 42.26 3.53
121 122 1.348036 GAGTGTGTCCTTGTTAGGGCT 59.652 52.381 0.00 0.00 46.84 5.19
122 123 1.774856 AGTGTGTCCTTGTTAGGGCTT 59.225 47.619 0.00 0.00 46.84 4.35
123 124 1.880027 GTGTGTCCTTGTTAGGGCTTG 59.120 52.381 0.00 0.00 46.84 4.01
124 125 1.493022 TGTGTCCTTGTTAGGGCTTGT 59.507 47.619 0.00 0.00 46.84 3.16
125 126 1.880027 GTGTCCTTGTTAGGGCTTGTG 59.120 52.381 0.00 0.00 46.84 3.33
127 128 1.145571 TCCTTGTTAGGGCTTGTGGT 58.854 50.000 0.00 0.00 42.26 4.16
128 129 1.202879 TCCTTGTTAGGGCTTGTGGTG 60.203 52.381 0.00 0.00 42.26 4.17
129 130 1.202879 CCTTGTTAGGGCTTGTGGTGA 60.203 52.381 0.00 0.00 37.94 4.02
131 132 1.136828 TGTTAGGGCTTGTGGTGACT 58.863 50.000 0.00 0.00 0.00 3.41
132 133 1.071699 TGTTAGGGCTTGTGGTGACTC 59.928 52.381 0.00 0.00 0.00 3.36
133 134 1.348036 GTTAGGGCTTGTGGTGACTCT 59.652 52.381 0.00 0.00 0.00 3.24
135 136 0.846693 AGGGCTTGTGGTGACTCTTT 59.153 50.000 0.00 0.00 0.00 2.52
136 137 1.215423 AGGGCTTGTGGTGACTCTTTT 59.785 47.619 0.00 0.00 0.00 2.27
137 138 1.609072 GGGCTTGTGGTGACTCTTTTC 59.391 52.381 0.00 0.00 0.00 2.29
138 139 2.297701 GGCTTGTGGTGACTCTTTTCA 58.702 47.619 0.00 0.00 0.00 2.69
139 140 2.033424 GGCTTGTGGTGACTCTTTTCAC 59.967 50.000 0.00 0.00 44.53 3.18
140 141 2.682856 GCTTGTGGTGACTCTTTTCACA 59.317 45.455 5.67 0.00 46.68 3.58
141 142 3.128589 GCTTGTGGTGACTCTTTTCACAA 59.871 43.478 5.67 0.00 46.68 3.33
142 143 4.202050 GCTTGTGGTGACTCTTTTCACAAT 60.202 41.667 7.49 0.00 46.68 2.71
143 144 5.499139 TTGTGGTGACTCTTTTCACAATC 57.501 39.130 5.67 0.00 46.68 2.67
144 145 4.522114 TGTGGTGACTCTTTTCACAATCA 58.478 39.130 5.67 0.00 46.68 2.57
145 146 4.946772 TGTGGTGACTCTTTTCACAATCAA 59.053 37.500 5.67 0.00 46.68 2.57
146 147 5.593909 TGTGGTGACTCTTTTCACAATCAAT 59.406 36.000 5.67 0.00 46.68 2.57
147 148 5.916883 GTGGTGACTCTTTTCACAATCAATG 59.083 40.000 5.67 0.00 46.68 2.82
149 150 5.507817 GGTGACTCTTTTCACAATCAATGCA 60.508 40.000 5.67 0.00 46.68 3.96
151 152 6.643770 GTGACTCTTTTCACAATCAATGCAAT 59.356 34.615 0.00 0.00 44.62 3.56
152 153 6.643360 TGACTCTTTTCACAATCAATGCAATG 59.357 34.615 0.00 0.00 0.00 2.82
153 154 6.751157 ACTCTTTTCACAATCAATGCAATGA 58.249 32.000 6.97 6.97 0.00 2.57
154 155 7.211573 ACTCTTTTCACAATCAATGCAATGAA 58.788 30.769 8.85 0.00 32.06 2.57
155 156 7.711772 ACTCTTTTCACAATCAATGCAATGAAA 59.288 29.630 8.85 5.35 32.69 2.69
157 158 7.494952 TCTTTTCACAATCAATGCAATGAAACA 59.505 29.630 8.85 0.00 33.67 2.83
158 159 7.731882 TTTCACAATCAATGCAATGAAACAT 57.268 28.000 8.85 0.00 30.78 2.71
160 161 8.828688 TTCACAATCAATGCAATGAAACATAA 57.171 26.923 8.85 0.00 32.06 1.90
161 162 8.828688 TCACAATCAATGCAATGAAACATAAA 57.171 26.923 8.85 0.00 32.06 1.40
162 163 8.927721 TCACAATCAATGCAATGAAACATAAAG 58.072 29.630 8.85 0.00 32.06 1.85
164 165 7.604927 ACAATCAATGCAATGAAACATAAAGCT 59.395 29.630 8.85 0.00 32.06 3.74
166 167 7.966246 TCAATGCAATGAAACATAAAGCTTT 57.034 28.000 17.30 17.30 0.00 3.51
167 168 8.380743 TCAATGCAATGAAACATAAAGCTTTT 57.619 26.923 18.47 0.00 0.00 2.27
168 169 8.497554 TCAATGCAATGAAACATAAAGCTTTTC 58.502 29.630 18.47 8.92 0.00 2.29
169 170 8.500773 CAATGCAATGAAACATAAAGCTTTTCT 58.499 29.630 18.47 2.37 31.68 2.52
170 171 7.642071 TGCAATGAAACATAAAGCTTTTCTC 57.358 32.000 18.47 7.70 31.68 2.87
171 172 6.363088 TGCAATGAAACATAAAGCTTTTCTCG 59.637 34.615 18.47 6.18 31.68 4.04
172 173 6.582295 GCAATGAAACATAAAGCTTTTCTCGA 59.418 34.615 18.47 0.00 31.68 4.04
174 175 8.967218 CAATGAAACATAAAGCTTTTCTCGAAA 58.033 29.630 18.47 0.00 31.68 3.46
176 177 7.476667 TGAAACATAAAGCTTTTCTCGAAACA 58.523 30.769 18.47 6.32 31.68 2.83
178 179 6.861065 ACATAAAGCTTTTCTCGAAACAGA 57.139 33.333 18.47 0.00 0.00 3.41
179 180 7.440523 ACATAAAGCTTTTCTCGAAACAGAT 57.559 32.000 18.47 0.00 0.00 2.90
181 182 8.443937 ACATAAAGCTTTTCTCGAAACAGATAC 58.556 33.333 18.47 0.00 0.00 2.24
185 186 4.621886 GCTTTTCTCGAAACAGATACGACT 59.378 41.667 0.00 0.00 32.72 4.18
187 188 6.346678 GCTTTTCTCGAAACAGATACGACTTT 60.347 38.462 0.00 0.00 32.72 2.66
189 190 3.918591 TCTCGAAACAGATACGACTTTGC 59.081 43.478 0.00 0.00 32.72 3.68
190 191 3.909430 TCGAAACAGATACGACTTTGCT 58.091 40.909 0.00 0.00 0.00 3.91
191 192 3.918591 TCGAAACAGATACGACTTTGCTC 59.081 43.478 0.00 0.00 0.00 4.26
192 193 3.673338 CGAAACAGATACGACTTTGCTCA 59.327 43.478 0.00 0.00 0.00 4.26
193 194 4.149922 CGAAACAGATACGACTTTGCTCAA 59.850 41.667 0.00 0.00 0.00 3.02
194 195 5.333035 CGAAACAGATACGACTTTGCTCAAA 60.333 40.000 0.00 0.00 0.00 2.69
195 196 4.992381 ACAGATACGACTTTGCTCAAAC 57.008 40.909 0.00 0.00 0.00 2.93
196 197 3.428870 ACAGATACGACTTTGCTCAAACG 59.571 43.478 0.00 4.52 0.00 3.60
197 198 3.428870 CAGATACGACTTTGCTCAAACGT 59.571 43.478 13.04 13.04 37.04 3.99
198 199 3.673809 AGATACGACTTTGCTCAAACGTC 59.326 43.478 12.20 11.77 35.57 4.34
199 200 1.935933 ACGACTTTGCTCAAACGTCT 58.064 45.000 15.73 0.00 30.58 4.18
200 201 3.088194 ACGACTTTGCTCAAACGTCTA 57.912 42.857 15.73 0.00 30.58 2.59
202 203 4.056050 ACGACTTTGCTCAAACGTCTATT 58.944 39.130 15.73 0.00 30.58 1.73
205 206 3.563808 ACTTTGCTCAAACGTCTATTGCA 59.436 39.130 0.00 0.00 0.00 4.08
206 207 4.216257 ACTTTGCTCAAACGTCTATTGCAT 59.784 37.500 0.00 0.00 0.00 3.96
210 211 4.215185 TGCTCAAACGTCTATTGCATTTCA 59.785 37.500 0.00 0.00 0.00 2.69
211 212 5.106197 TGCTCAAACGTCTATTGCATTTCAT 60.106 36.000 0.00 0.00 0.00 2.57
214 215 6.545508 TCAAACGTCTATTGCATTTCATGAG 58.454 36.000 0.00 0.00 0.00 2.90
215 216 4.542662 ACGTCTATTGCATTTCATGAGC 57.457 40.909 0.00 0.00 0.00 4.26
217 218 3.313249 CGTCTATTGCATTTCATGAGCCA 59.687 43.478 0.00 0.00 0.00 4.75
218 219 4.201940 CGTCTATTGCATTTCATGAGCCAA 60.202 41.667 0.00 0.00 0.00 4.52
219 220 5.653507 GTCTATTGCATTTCATGAGCCAAA 58.346 37.500 0.00 0.00 0.00 3.28
220 221 6.101332 GTCTATTGCATTTCATGAGCCAAAA 58.899 36.000 0.00 0.00 0.00 2.44
221 222 6.035327 GTCTATTGCATTTCATGAGCCAAAAC 59.965 38.462 0.00 0.00 0.00 2.43
222 223 4.339872 TTGCATTTCATGAGCCAAAACT 57.660 36.364 0.00 0.00 0.00 2.66
223 224 3.655486 TGCATTTCATGAGCCAAAACTG 58.345 40.909 0.00 0.00 0.00 3.16
224 225 2.997986 GCATTTCATGAGCCAAAACTGG 59.002 45.455 0.00 0.00 0.00 4.00
226 227 3.731652 TTTCATGAGCCAAAACTGGTG 57.268 42.857 0.00 0.00 0.00 4.17
227 228 1.619654 TCATGAGCCAAAACTGGTGG 58.380 50.000 0.00 0.00 39.33 4.61
228 229 1.133513 TCATGAGCCAAAACTGGTGGT 60.134 47.619 0.00 0.00 38.50 4.16
229 230 1.688197 CATGAGCCAAAACTGGTGGTT 59.312 47.619 0.00 0.00 38.50 3.67
231 232 3.237268 TGAGCCAAAACTGGTGGTTAT 57.763 42.857 0.00 0.00 38.50 1.89
232 233 4.374689 TGAGCCAAAACTGGTGGTTATA 57.625 40.909 0.00 0.00 38.50 0.98
233 234 4.730966 TGAGCCAAAACTGGTGGTTATAA 58.269 39.130 0.00 0.00 38.50 0.98
235 236 5.184864 TGAGCCAAAACTGGTGGTTATAATG 59.815 40.000 0.00 0.00 38.50 1.90
236 237 5.083821 AGCCAAAACTGGTGGTTATAATGT 58.916 37.500 0.00 0.00 38.50 2.71
237 238 5.542251 AGCCAAAACTGGTGGTTATAATGTT 59.458 36.000 0.00 0.00 38.50 2.71
238 239 5.637387 GCCAAAACTGGTGGTTATAATGTTG 59.363 40.000 0.00 0.00 38.50 3.33
239 240 5.637387 CCAAAACTGGTGGTTATAATGTTGC 59.363 40.000 0.00 0.00 37.12 4.17
240 241 5.400066 AAACTGGTGGTTATAATGTTGCC 57.600 39.130 0.00 0.00 37.12 4.52
241 242 3.361786 ACTGGTGGTTATAATGTTGCCC 58.638 45.455 0.00 0.00 0.00 5.36
242 243 2.693074 CTGGTGGTTATAATGTTGCCCC 59.307 50.000 0.00 0.00 0.00 5.80
243 244 2.043115 TGGTGGTTATAATGTTGCCCCA 59.957 45.455 0.00 0.00 0.00 4.96
244 245 3.100671 GGTGGTTATAATGTTGCCCCAA 58.899 45.455 0.00 0.00 0.00 4.12
245 246 3.515901 GGTGGTTATAATGTTGCCCCAAA 59.484 43.478 0.00 0.00 0.00 3.28
246 247 4.163268 GGTGGTTATAATGTTGCCCCAAAT 59.837 41.667 0.00 0.00 0.00 2.32
247 248 5.364157 GGTGGTTATAATGTTGCCCCAAATA 59.636 40.000 0.00 0.00 0.00 1.40
248 249 6.042666 GGTGGTTATAATGTTGCCCCAAATAT 59.957 38.462 0.00 0.00 0.00 1.28
249 250 6.928492 GTGGTTATAATGTTGCCCCAAATATG 59.072 38.462 0.00 0.00 0.00 1.78
251 252 4.622260 ATAATGTTGCCCCAAATATGGC 57.378 40.909 0.00 0.00 46.09 4.40
255 256 4.198087 GCCCCAAATATGGCTCCC 57.802 61.111 0.00 0.00 46.09 4.30
256 257 1.543690 GCCCCAAATATGGCTCCCT 59.456 57.895 0.00 0.00 46.09 4.20
257 258 0.540597 GCCCCAAATATGGCTCCCTC 60.541 60.000 0.00 0.00 46.09 4.30
258 259 0.113190 CCCCAAATATGGCTCCCTCC 59.887 60.000 0.00 0.00 46.09 4.30
259 260 0.852842 CCCAAATATGGCTCCCTCCA 59.147 55.000 0.00 0.00 46.09 3.86
260 261 1.430464 CCCAAATATGGCTCCCTCCAT 59.570 52.381 0.69 0.69 46.09 3.41
261 262 2.556114 CCCAAATATGGCTCCCTCCATC 60.556 54.545 0.00 0.00 43.00 3.51
262 263 2.556114 CCAAATATGGCTCCCTCCATCC 60.556 54.545 0.00 0.00 43.00 3.51
263 264 1.376649 AATATGGCTCCCTCCATCCC 58.623 55.000 0.00 0.00 43.00 3.85
264 265 0.911525 ATATGGCTCCCTCCATCCCG 60.912 60.000 0.00 0.00 43.00 5.14
265 266 2.326529 TATGGCTCCCTCCATCCCGT 62.327 60.000 0.00 0.00 43.00 5.28
266 267 2.122989 GGCTCCCTCCATCCCGTA 60.123 66.667 0.00 0.00 0.00 4.02
267 268 1.536662 GGCTCCCTCCATCCCGTAT 60.537 63.158 0.00 0.00 0.00 3.06
268 269 1.128188 GGCTCCCTCCATCCCGTATT 61.128 60.000 0.00 0.00 0.00 1.89
269 270 1.640917 GCTCCCTCCATCCCGTATTA 58.359 55.000 0.00 0.00 0.00 0.98
270 271 1.975680 GCTCCCTCCATCCCGTATTAA 59.024 52.381 0.00 0.00 0.00 1.40
271 272 2.572104 GCTCCCTCCATCCCGTATTAAT 59.428 50.000 0.00 0.00 0.00 1.40
272 273 3.009143 GCTCCCTCCATCCCGTATTAATT 59.991 47.826 0.00 0.00 0.00 1.40
273 274 4.579869 CTCCCTCCATCCCGTATTAATTG 58.420 47.826 0.00 0.00 0.00 2.32
274 275 4.236195 TCCCTCCATCCCGTATTAATTGA 58.764 43.478 0.00 0.00 0.00 2.57
275 276 4.041198 TCCCTCCATCCCGTATTAATTGAC 59.959 45.833 0.00 0.00 0.00 3.18
276 277 4.202419 CCCTCCATCCCGTATTAATTGACA 60.202 45.833 0.00 0.00 0.00 3.58
277 278 4.755123 CCTCCATCCCGTATTAATTGACAC 59.245 45.833 0.00 0.00 0.00 3.67
278 279 5.454755 CCTCCATCCCGTATTAATTGACACT 60.455 44.000 0.00 0.00 0.00 3.55
279 280 5.607477 TCCATCCCGTATTAATTGACACTC 58.393 41.667 0.00 0.00 0.00 3.51
280 281 5.129650 TCCATCCCGTATTAATTGACACTCA 59.870 40.000 0.00 0.00 0.00 3.41
281 282 5.820423 CCATCCCGTATTAATTGACACTCAA 59.180 40.000 0.00 0.00 41.09 3.02
283 284 6.918892 TCCCGTATTAATTGACACTCAATG 57.081 37.500 0.00 0.00 45.57 2.82
284 285 5.820423 TCCCGTATTAATTGACACTCAATGG 59.180 40.000 0.00 0.00 45.57 3.16
285 286 5.820423 CCCGTATTAATTGACACTCAATGGA 59.180 40.000 0.00 0.00 45.57 3.41
286 287 6.486657 CCCGTATTAATTGACACTCAATGGAT 59.513 38.462 0.00 0.13 45.57 3.41
287 288 7.355017 CCGTATTAATTGACACTCAATGGATG 58.645 38.462 0.00 0.00 45.57 3.51
288 289 7.012327 CCGTATTAATTGACACTCAATGGATGT 59.988 37.037 0.00 0.00 45.57 3.06
289 290 9.040939 CGTATTAATTGACACTCAATGGATGTA 57.959 33.333 0.00 0.00 45.57 2.29
296 297 8.628630 TTGACACTCAATGGATGTATTTAACA 57.371 30.769 0.00 0.00 35.31 2.41
297 298 8.039603 TGACACTCAATGGATGTATTTAACAC 57.960 34.615 0.00 0.00 42.09 3.32
298 299 7.882791 TGACACTCAATGGATGTATTTAACACT 59.117 33.333 0.00 0.00 42.09 3.55
299 300 8.044060 ACACTCAATGGATGTATTTAACACTG 57.956 34.615 0.00 0.00 42.09 3.66
300 301 7.882791 ACACTCAATGGATGTATTTAACACTGA 59.117 33.333 0.00 0.00 42.09 3.41
301 302 8.393366 CACTCAATGGATGTATTTAACACTGAG 58.607 37.037 0.00 0.00 42.09 3.35
302 303 8.321353 ACTCAATGGATGTATTTAACACTGAGA 58.679 33.333 8.19 0.00 42.09 3.27
303 304 9.334947 CTCAATGGATGTATTTAACACTGAGAT 57.665 33.333 0.00 0.00 42.09 2.75
304 305 9.112725 TCAATGGATGTATTTAACACTGAGATG 57.887 33.333 0.00 0.00 42.09 2.90
305 306 6.925610 TGGATGTATTTAACACTGAGATGC 57.074 37.500 0.00 0.00 42.09 3.91
306 307 5.523552 TGGATGTATTTAACACTGAGATGCG 59.476 40.000 0.00 0.00 42.09 4.73
307 308 5.523916 GGATGTATTTAACACTGAGATGCGT 59.476 40.000 0.00 0.00 42.09 5.24
308 309 6.292381 GGATGTATTTAACACTGAGATGCGTC 60.292 42.308 0.00 0.00 42.09 5.19
309 310 5.720202 TGTATTTAACACTGAGATGCGTCT 58.280 37.500 8.55 8.55 32.74 4.18
310 311 6.859017 TGTATTTAACACTGAGATGCGTCTA 58.141 36.000 8.83 0.00 31.00 2.59
311 312 7.489160 TGTATTTAACACTGAGATGCGTCTAT 58.511 34.615 8.83 0.00 31.00 1.98
312 313 8.626526 TGTATTTAACACTGAGATGCGTCTATA 58.373 33.333 8.83 0.10 31.00 1.31
313 314 9.627395 GTATTTAACACTGAGATGCGTCTATAT 57.373 33.333 8.83 0.00 33.97 0.86
315 316 9.627395 ATTTAACACTGAGATGCGTCTATATAC 57.373 33.333 8.83 0.00 33.97 1.47
316 317 6.635030 AACACTGAGATGCGTCTATATACA 57.365 37.500 8.83 1.09 33.97 2.29
317 318 6.825944 ACACTGAGATGCGTCTATATACAT 57.174 37.500 8.83 0.00 33.97 2.29
318 319 6.847400 ACACTGAGATGCGTCTATATACATC 58.153 40.000 8.83 3.85 39.35 3.06
320 321 6.966066 CACTGAGATGCGTCTATATACATCTG 59.034 42.308 8.83 1.03 46.95 2.90
321 322 6.657117 ACTGAGATGCGTCTATATACATCTGT 59.343 38.462 8.83 1.65 46.95 3.41
322 323 7.175816 ACTGAGATGCGTCTATATACATCTGTT 59.824 37.037 8.83 1.48 46.95 3.16
323 324 7.886338 TGAGATGCGTCTATATACATCTGTTT 58.114 34.615 8.83 0.00 46.95 2.83
324 325 7.809806 TGAGATGCGTCTATATACATCTGTTTG 59.190 37.037 8.83 0.00 46.95 2.93
325 326 7.886338 AGATGCGTCTATATACATCTGTTTGA 58.114 34.615 6.67 0.00 45.65 2.69
326 327 8.026026 AGATGCGTCTATATACATCTGTTTGAG 58.974 37.037 6.67 0.00 45.65 3.02
327 328 5.920840 TGCGTCTATATACATCTGTTTGAGC 59.079 40.000 0.00 0.00 0.00 4.26
328 329 5.059832 GCGTCTATATACATCTGTTTGAGCG 59.940 44.000 0.00 0.00 0.00 5.03
329 330 6.371389 CGTCTATATACATCTGTTTGAGCGA 58.629 40.000 0.00 0.00 0.00 4.93
330 331 7.024171 CGTCTATATACATCTGTTTGAGCGAT 58.976 38.462 0.00 0.00 0.00 4.58
331 332 8.175716 CGTCTATATACATCTGTTTGAGCGATA 58.824 37.037 0.00 0.00 0.00 2.92
340 341 8.939929 ACATCTGTTTGAGCGATATTAATATGG 58.060 33.333 12.74 12.27 0.00 2.74
341 342 7.364522 TCTGTTTGAGCGATATTAATATGGC 57.635 36.000 26.29 26.29 42.52 4.40
342 343 6.934083 TCTGTTTGAGCGATATTAATATGGCA 59.066 34.615 31.54 17.31 43.97 4.92
343 344 6.898041 TGTTTGAGCGATATTAATATGGCAC 58.102 36.000 31.54 27.46 43.97 5.01
344 345 5.778161 TTGAGCGATATTAATATGGCACG 57.222 39.130 31.54 20.84 43.97 5.34
345 346 5.066968 TGAGCGATATTAATATGGCACGA 57.933 39.130 31.54 18.40 43.97 4.35
346 347 5.474825 TGAGCGATATTAATATGGCACGAA 58.525 37.500 31.54 17.69 43.97 3.85
347 348 5.576774 TGAGCGATATTAATATGGCACGAAG 59.423 40.000 31.54 9.40 43.97 3.79
348 349 4.870426 AGCGATATTAATATGGCACGAAGG 59.130 41.667 31.54 7.19 43.97 3.46
349 350 4.034048 GCGATATTAATATGGCACGAAGGG 59.966 45.833 27.76 0.63 42.01 3.95
350 351 5.416083 CGATATTAATATGGCACGAAGGGA 58.584 41.667 12.74 0.00 0.00 4.20
351 352 6.049149 CGATATTAATATGGCACGAAGGGAT 58.951 40.000 12.74 0.00 0.00 3.85
476 632 9.953565 ATAGACATGTTATACTACCTCTCTCTC 57.046 37.037 0.00 0.00 0.00 3.20
479 635 7.579105 ACATGTTATACTACCTCTCTCTCAGT 58.421 38.462 0.00 0.00 0.00 3.41
480 636 8.056400 ACATGTTATACTACCTCTCTCTCAGTT 58.944 37.037 0.00 0.00 0.00 3.16
483 639 9.393512 TGTTATACTACCTCTCTCTCAGTTTAC 57.606 37.037 0.00 0.00 0.00 2.01
487 643 6.177610 ACTACCTCTCTCTCAGTTTACAGAG 58.822 44.000 0.00 0.00 38.01 3.35
488 644 3.761752 ACCTCTCTCTCAGTTTACAGAGC 59.238 47.826 0.00 0.00 36.79 4.09
491 647 5.384063 TCTCTCTCAGTTTACAGAGCAAG 57.616 43.478 0.00 0.00 36.79 4.01
492 648 3.919216 TCTCTCAGTTTACAGAGCAAGC 58.081 45.455 0.00 0.00 36.79 4.01
493 649 2.665537 CTCTCAGTTTACAGAGCAAGCG 59.334 50.000 0.00 0.00 30.08 4.68
494 650 1.127582 CTCAGTTTACAGAGCAAGCGC 59.872 52.381 0.00 0.00 38.99 5.92
495 651 0.179240 CAGTTTACAGAGCAAGCGCG 60.179 55.000 0.00 0.00 45.49 6.86
496 652 0.600255 AGTTTACAGAGCAAGCGCGT 60.600 50.000 8.43 0.00 45.49 6.01
497 653 1.065358 GTTTACAGAGCAAGCGCGTA 58.935 50.000 8.43 0.00 45.49 4.42
498 654 1.065358 TTTACAGAGCAAGCGCGTAC 58.935 50.000 8.43 0.00 45.49 3.67
499 655 0.734942 TTACAGAGCAAGCGCGTACC 60.735 55.000 8.43 0.00 45.49 3.34
500 656 2.552585 TACAGAGCAAGCGCGTACCC 62.553 60.000 8.43 0.00 45.49 3.69
501 657 4.452733 AGAGCAAGCGCGTACCCC 62.453 66.667 8.43 0.00 45.49 4.95
502 658 4.452733 GAGCAAGCGCGTACCCCT 62.453 66.667 8.43 0.00 45.49 4.79
503 659 3.072468 AGCAAGCGCGTACCCCTA 61.072 61.111 8.43 0.00 45.49 3.53
504 660 2.108362 GCAAGCGCGTACCCCTAT 59.892 61.111 8.43 0.00 0.00 2.57
505 661 2.244651 GCAAGCGCGTACCCCTATG 61.245 63.158 8.43 0.00 0.00 2.23
506 662 1.143183 CAAGCGCGTACCCCTATGT 59.857 57.895 8.43 0.00 0.00 2.29
507 663 0.874607 CAAGCGCGTACCCCTATGTC 60.875 60.000 8.43 0.00 0.00 3.06
508 664 2.345880 AAGCGCGTACCCCTATGTCG 62.346 60.000 8.43 0.00 0.00 4.35
510 666 1.434696 CGCGTACCCCTATGTCGTT 59.565 57.895 0.00 0.00 0.00 3.85
511 667 0.662619 CGCGTACCCCTATGTCGTTA 59.337 55.000 0.00 0.00 0.00 3.18
512 668 1.065401 CGCGTACCCCTATGTCGTTAA 59.935 52.381 0.00 0.00 0.00 2.01
514 670 3.721035 GCGTACCCCTATGTCGTTAATT 58.279 45.455 0.00 0.00 0.00 1.40
516 672 4.025480 GCGTACCCCTATGTCGTTAATTTG 60.025 45.833 0.00 0.00 0.00 2.32
517 673 5.350633 CGTACCCCTATGTCGTTAATTTGA 58.649 41.667 0.00 0.00 0.00 2.69
518 674 5.232838 CGTACCCCTATGTCGTTAATTTGAC 59.767 44.000 0.00 0.00 35.67 3.18
519 675 4.520179 ACCCCTATGTCGTTAATTTGACC 58.480 43.478 0.00 0.00 34.18 4.02
520 676 4.019141 ACCCCTATGTCGTTAATTTGACCA 60.019 41.667 0.00 0.00 34.18 4.02
521 677 4.944930 CCCCTATGTCGTTAATTTGACCAA 59.055 41.667 0.00 0.00 34.18 3.67
522 678 5.163693 CCCCTATGTCGTTAATTTGACCAAC 60.164 44.000 0.00 0.00 34.18 3.77
524 680 6.150474 CCCTATGTCGTTAATTTGACCAACTT 59.850 38.462 0.00 0.00 34.18 2.66
525 681 7.334921 CCCTATGTCGTTAATTTGACCAACTTA 59.665 37.037 0.00 0.00 34.18 2.24
531 687 9.881529 GTCGTTAATTTGACCAACTTAATACAA 57.118 29.630 8.02 0.00 31.31 2.41
533 689 9.887406 CGTTAATTTGACCAACTTAATACAAGT 57.113 29.630 8.02 0.00 31.31 3.16
587 1341 9.914131 AAACTTAAGATGCTCTATTTTCAAACC 57.086 29.630 10.09 0.00 0.00 3.27
591 1345 7.865706 AAGATGCTCTATTTTCAAACCGTAT 57.134 32.000 0.00 0.00 0.00 3.06
594 1348 9.561069 AGATGCTCTATTTTCAAACCGTATAAT 57.439 29.630 0.00 0.00 0.00 1.28
641 3666 6.530019 AAGGTGATAAAATTGGCAACCTAG 57.470 37.500 0.00 0.00 0.00 3.02
642 3667 4.956075 AGGTGATAAAATTGGCAACCTAGG 59.044 41.667 7.41 7.41 0.00 3.02
645 3670 6.549736 GGTGATAAAATTGGCAACCTAGGTAT 59.450 38.462 16.67 0.83 0.00 2.73
648 3673 7.442969 TGATAAAATTGGCAACCTAGGTATACG 59.557 37.037 16.67 5.52 0.00 3.06
649 3674 4.765813 AATTGGCAACCTAGGTATACGT 57.234 40.909 16.67 3.23 0.00 3.57
651 3676 2.459644 TGGCAACCTAGGTATACGTGT 58.540 47.619 16.67 0.00 0.00 4.49
652 3677 3.630168 TGGCAACCTAGGTATACGTGTA 58.370 45.455 16.67 0.46 0.00 2.90
653 3678 3.633525 TGGCAACCTAGGTATACGTGTAG 59.366 47.826 16.67 3.92 0.00 2.74
655 3680 3.885297 GCAACCTAGGTATACGTGTAGGA 59.115 47.826 16.67 0.00 36.34 2.94
657 3682 5.128919 CAACCTAGGTATACGTGTAGGACT 58.871 45.833 16.67 11.65 36.34 3.85
658 3683 5.379706 ACCTAGGTATACGTGTAGGACTT 57.620 43.478 14.41 6.18 36.34 3.01
659 3684 6.500589 ACCTAGGTATACGTGTAGGACTTA 57.499 41.667 14.41 0.00 36.34 2.24
660 3685 7.084268 ACCTAGGTATACGTGTAGGACTTAT 57.916 40.000 14.41 5.66 36.34 1.73
662 3687 8.660435 ACCTAGGTATACGTGTAGGACTTATAA 58.340 37.037 14.41 0.00 36.34 0.98
665 3690 8.986929 AGGTATACGTGTAGGACTTATAAACT 57.013 34.615 0.00 0.00 0.00 2.66
666 3691 8.844244 AGGTATACGTGTAGGACTTATAAACTG 58.156 37.037 0.00 0.00 0.00 3.16
671 3696 6.583806 ACGTGTAGGACTTATAAACTGAAACG 59.416 38.462 0.00 0.00 0.00 3.60
672 3697 6.034256 CGTGTAGGACTTATAAACTGAAACGG 59.966 42.308 0.00 0.00 0.00 4.44
673 3698 7.092716 GTGTAGGACTTATAAACTGAAACGGA 58.907 38.462 0.00 0.00 0.00 4.69
676 3701 5.247792 AGGACTTATAAACTGAAACGGAGGT 59.752 40.000 0.00 0.00 0.00 3.85
677 3702 6.438425 AGGACTTATAAACTGAAACGGAGGTA 59.562 38.462 0.00 0.00 0.00 3.08
678 3703 6.755607 GGACTTATAAACTGAAACGGAGGTAG 59.244 42.308 0.00 0.00 0.00 3.18
679 3704 7.237209 ACTTATAAACTGAAACGGAGGTAGT 57.763 36.000 0.00 0.00 0.00 2.73
680 3705 8.353423 ACTTATAAACTGAAACGGAGGTAGTA 57.647 34.615 0.00 0.00 0.00 1.82
681 3706 8.465201 ACTTATAAACTGAAACGGAGGTAGTAG 58.535 37.037 0.00 0.00 0.00 2.57
682 3707 6.847421 ATAAACTGAAACGGAGGTAGTAGT 57.153 37.500 0.00 0.00 0.00 2.73
684 3709 6.847421 AAACTGAAACGGAGGTAGTAGTAT 57.153 37.500 0.00 0.00 0.00 2.12
685 3710 7.944729 AAACTGAAACGGAGGTAGTAGTATA 57.055 36.000 0.00 0.00 0.00 1.47
686 3711 8.530804 AAACTGAAACGGAGGTAGTAGTATAT 57.469 34.615 0.00 0.00 0.00 0.86
687 3712 8.530804 AACTGAAACGGAGGTAGTAGTATATT 57.469 34.615 0.00 0.00 0.00 1.28
688 3713 8.530804 ACTGAAACGGAGGTAGTAGTATATTT 57.469 34.615 0.00 0.00 0.00 1.40
689 3714 8.411683 ACTGAAACGGAGGTAGTAGTATATTTG 58.588 37.037 0.00 0.00 0.00 2.32
690 3715 8.297470 TGAAACGGAGGTAGTAGTATATTTGT 57.703 34.615 0.00 0.00 0.00 2.83
715 6437 9.869844 GTTCACTCATTTCATTATGTATACAGC 57.130 33.333 11.91 0.00 0.00 4.40
776 6498 7.822334 TGAACGAAGGAGCTAATAAAATCAGAA 59.178 33.333 0.00 0.00 0.00 3.02
905 6627 3.680458 GCAGTACTAGAGACAAAACTGGC 59.320 47.826 0.00 0.00 35.89 4.85
962 6684 3.985925 GGACTAACTGTCGTTGTTACCAG 59.014 47.826 0.00 0.00 46.24 4.00
964 6686 2.319136 AACTGTCGTTGTTACCAGCA 57.681 45.000 0.00 0.00 30.67 4.41
996 6718 3.840666 TCTCCATCCACAAGCTCTAAAGT 59.159 43.478 0.00 0.00 0.00 2.66
997 6719 4.081420 TCTCCATCCACAAGCTCTAAAGTC 60.081 45.833 0.00 0.00 0.00 3.01
998 6720 3.840666 TCCATCCACAAGCTCTAAAGTCT 59.159 43.478 0.00 0.00 0.00 3.24
999 6721 5.023452 TCCATCCACAAGCTCTAAAGTCTA 58.977 41.667 0.00 0.00 0.00 2.59
1001 6723 6.013725 TCCATCCACAAGCTCTAAAGTCTAAA 60.014 38.462 0.00 0.00 0.00 1.85
1002 6724 6.314896 CCATCCACAAGCTCTAAAGTCTAAAG 59.685 42.308 0.00 0.00 0.00 1.85
1003 6725 6.665992 TCCACAAGCTCTAAAGTCTAAAGA 57.334 37.500 0.00 0.00 0.00 2.52
1004 6726 7.062749 TCCACAAGCTCTAAAGTCTAAAGAA 57.937 36.000 0.00 0.00 0.00 2.52
1005 6727 7.506114 TCCACAAGCTCTAAAGTCTAAAGAAA 58.494 34.615 0.00 0.00 0.00 2.52
1006 6728 7.657761 TCCACAAGCTCTAAAGTCTAAAGAAAG 59.342 37.037 0.00 0.00 0.00 2.62
1155 6890 1.228063 CAAGCAGGCACAGGTCAGT 60.228 57.895 0.00 0.00 0.00 3.41
1461 7208 2.106511 GGTGCCATCTAGCCCTGAATTA 59.893 50.000 0.00 0.00 0.00 1.40
1469 7216 5.036117 TCTAGCCCTGAATTATTGGACAC 57.964 43.478 0.00 0.00 0.00 3.67
1473 7220 4.706962 AGCCCTGAATTATTGGACACTTTC 59.293 41.667 0.00 0.00 0.00 2.62
1478 7225 2.500392 TTATTGGACACTTTCGGGGG 57.500 50.000 0.00 0.00 0.00 5.40
1495 7255 0.107654 GGGAATCAGGGGTCAGTTCG 60.108 60.000 0.00 0.00 0.00 3.95
1496 7256 0.107654 GGAATCAGGGGTCAGTTCGG 60.108 60.000 0.00 0.00 0.00 4.30
1497 7257 0.902531 GAATCAGGGGTCAGTTCGGA 59.097 55.000 0.00 0.00 0.00 4.55
1498 7258 1.486726 GAATCAGGGGTCAGTTCGGAT 59.513 52.381 0.00 0.00 0.00 4.18
1529 7292 6.800072 AAAGGGAATTCTTGGTTGTTGTTA 57.200 33.333 5.23 0.00 0.00 2.41
1555 7318 2.799126 TAAAATCAGCGTGGGATGGT 57.201 45.000 0.00 0.00 0.00 3.55
1581 7354 4.110482 CGTACAGAGTTACTAACATGGCC 58.890 47.826 0.00 0.00 0.00 5.36
1582 7355 3.247006 ACAGAGTTACTAACATGGCCG 57.753 47.619 0.00 0.00 0.00 6.13
1639 7412 5.012239 CCTGTGGGAGAAAAATTCAGATGA 58.988 41.667 0.00 0.00 33.58 2.92
1761 7534 7.041030 TGGTGTAGTTACAAACACATAACCATG 60.041 37.037 18.11 0.00 46.22 3.66
1833 7618 6.624423 GCGACCACTTGAGTCTATTACTGTAA 60.624 42.308 2.26 2.26 39.07 2.41
1917 7707 7.903431 GGTCTAATGTTTCATCGACACAATTAC 59.097 37.037 0.00 0.00 0.00 1.89
1985 7776 2.796593 GGCAAATTTGTCACAGTTCTGC 59.203 45.455 17.76 0.00 31.86 4.26
2114 7905 1.811266 CATGCCCTTCTGGTCGACG 60.811 63.158 9.92 0.00 36.04 5.12
2168 7959 5.453567 AATTCCCTCACTAAAAACAGTGC 57.546 39.130 0.00 0.00 44.62 4.40
2210 8001 6.024049 GTCTGATAACTTCCATTTTGCTTCG 58.976 40.000 0.00 0.00 0.00 3.79
2522 8314 2.729491 CGTCAAGCGAGTCGTGCA 60.729 61.111 15.08 0.00 44.77 4.57
2585 8377 4.633565 AGCGAAGGAAGATCAAGAAATCAC 59.366 41.667 0.00 0.00 0.00 3.06
2713 8505 1.014352 GCCATACAGGTAAACGCAGG 58.986 55.000 0.00 0.00 40.61 4.85
2716 8508 2.277084 CATACAGGTAAACGCAGGGAC 58.723 52.381 0.00 0.00 0.00 4.46
2758 8716 0.249489 GGTGCCTAGACTATGTGCCG 60.249 60.000 0.00 0.00 0.00 5.69
3048 9010 0.108019 AGTTCCCGGACAAGGTCAAC 59.892 55.000 0.73 0.00 33.68 3.18
3103 9065 1.669440 GCTTGACACACGGGGTCTA 59.331 57.895 7.63 0.26 36.26 2.59
3104 9066 0.249398 GCTTGACACACGGGGTCTAT 59.751 55.000 7.63 0.00 36.26 1.98
3105 9067 1.479323 GCTTGACACACGGGGTCTATA 59.521 52.381 7.63 0.00 36.26 1.31
3112 9074 4.801164 ACACACGGGGTCTATAAGTCTAT 58.199 43.478 0.00 0.00 0.00 1.98
3130 9092 1.856629 ATTATGCTTGGCCTGCACTT 58.143 45.000 22.50 12.68 43.59 3.16
3135 9097 1.364901 CTTGGCCTGCACTTGGTTG 59.635 57.895 3.32 0.00 0.00 3.77
3136 9098 1.076412 TTGGCCTGCACTTGGTTGA 60.076 52.632 3.32 0.00 0.00 3.18
3137 9099 1.108727 TTGGCCTGCACTTGGTTGAG 61.109 55.000 3.32 0.00 0.00 3.02
3138 9100 2.647297 GCCTGCACTTGGTTGAGC 59.353 61.111 0.00 0.00 0.00 4.26
3191 9159 2.627515 ACATATGATGCGTGCTTCCT 57.372 45.000 10.38 0.00 0.00 3.36
3192 9160 2.216046 ACATATGATGCGTGCTTCCTG 58.784 47.619 10.38 3.80 0.00 3.86
3225 9193 7.559590 AGGATATGCTAGTTTCATCAACAAC 57.440 36.000 0.00 0.00 37.93 3.32
3264 9232 1.937899 GTATGTATGTTGGGTCCGTGC 59.062 52.381 0.00 0.00 0.00 5.34
3274 9242 1.668101 GGGTCCGTGCTGTCCTCTAG 61.668 65.000 0.00 0.00 0.00 2.43
3275 9243 0.680280 GGTCCGTGCTGTCCTCTAGA 60.680 60.000 0.00 0.00 0.00 2.43
3276 9244 1.174783 GTCCGTGCTGTCCTCTAGAA 58.825 55.000 0.00 0.00 0.00 2.10
3278 9246 0.179161 CCGTGCTGTCCTCTAGAACG 60.179 60.000 4.30 4.30 44.83 3.95
3279 9247 0.798771 CGTGCTGTCCTCTAGAACGC 60.799 60.000 0.00 0.00 40.03 4.84
3280 9248 0.458716 GTGCTGTCCTCTAGAACGCC 60.459 60.000 0.00 0.00 0.00 5.68
3295 9273 1.734477 CGCCAGTGTTCAGTCCTCG 60.734 63.158 0.00 0.00 0.00 4.63
3359 9337 2.158623 TGGAATTCCCAGGGATCGAATG 60.159 50.000 21.90 0.00 40.82 2.67
3414 9442 4.660303 TCATCCTGGCTATAACAACTCCAT 59.340 41.667 0.00 0.00 0.00 3.41
3415 9443 4.422073 TCCTGGCTATAACAACTCCATG 57.578 45.455 0.00 0.00 0.00 3.66
3420 9448 6.071391 CCTGGCTATAACAACTCCATGTTTTT 60.071 38.462 0.00 0.00 40.52 1.94
3421 9449 7.122055 CCTGGCTATAACAACTCCATGTTTTTA 59.878 37.037 0.00 0.00 40.52 1.52
3422 9450 8.410673 TGGCTATAACAACTCCATGTTTTTAA 57.589 30.769 0.00 0.00 40.52 1.52
3423 9451 8.301002 TGGCTATAACAACTCCATGTTTTTAAC 58.699 33.333 0.00 0.00 40.52 2.01
3424 9452 8.301002 GGCTATAACAACTCCATGTTTTTAACA 58.699 33.333 0.00 0.00 46.94 2.41
3425 9453 9.341899 GCTATAACAACTCCATGTTTTTAACAG 57.658 33.333 0.00 0.00 45.95 3.16
3426 9454 9.341899 CTATAACAACTCCATGTTTTTAACAGC 57.658 33.333 0.00 0.00 45.95 4.40
3427 9455 5.852282 ACAACTCCATGTTTTTAACAGCT 57.148 34.783 0.00 0.00 45.95 4.24
3432 9576 4.930963 TCCATGTTTTTAACAGCTGTGTG 58.069 39.130 22.49 9.04 45.95 3.82
3439 9583 8.165239 TGTTTTTAACAGCTGTGTGAGATTAT 57.835 30.769 22.49 3.34 36.84 1.28
3449 9593 3.445805 TGTGTGAGATTATGGTCGCTACA 59.554 43.478 0.00 0.00 0.00 2.74
3552 9780 2.731976 GGAACAACTCTTAGTCAGCACG 59.268 50.000 0.00 0.00 0.00 5.34
3738 10133 2.206750 TGCGTCAGGTAACAAACAGAC 58.793 47.619 0.00 0.00 41.41 3.51
3745 10140 3.247648 CAGGTAACAAACAGACCACTTCG 59.752 47.826 0.00 0.00 41.41 3.79
3756 10151 4.154195 ACAGACCACTTCGTAAATGCATTC 59.846 41.667 13.38 0.00 0.00 2.67
3812 10208 7.307396 CCGGAATACAGAATACAAGCACATTAG 60.307 40.741 0.00 0.00 0.00 1.73
3821 10217 3.766545 ACAAGCACATTAGTGGGTTGAT 58.233 40.909 18.43 6.71 45.98 2.57
3822 10218 3.507233 ACAAGCACATTAGTGGGTTGATG 59.493 43.478 18.43 1.48 45.98 3.07
3839 10235 9.527157 TGGGTTGATGATCATTAACTCTTTTAA 57.473 29.630 31.72 16.57 38.26 1.52
3870 10268 1.017177 GGCGCTTTCGGTACATGACA 61.017 55.000 7.64 0.00 35.95 3.58
3871 10269 0.370273 GCGCTTTCGGTACATGACAG 59.630 55.000 0.00 0.00 35.95 3.51
3872 10270 1.990799 CGCTTTCGGTACATGACAGA 58.009 50.000 0.00 0.00 0.00 3.41
3873 10271 1.654105 CGCTTTCGGTACATGACAGAC 59.346 52.381 0.00 0.00 31.40 3.51
3929 10344 3.441222 CCAGAAATCTTGCAGTGCACATA 59.559 43.478 19.58 6.49 38.71 2.29
3953 10368 3.485431 CACCAGCTCGCTCGCTTG 61.485 66.667 0.00 0.00 38.41 4.01
4018 10444 1.131638 GGGTCTCCACCAGATATGCA 58.868 55.000 0.00 0.00 45.94 3.96
4052 10478 3.171388 CGGGGGCTTAGGGCATCT 61.171 66.667 0.00 0.00 44.01 2.90
4065 10491 6.542370 GCTTAGGGCATCTTGAATAAACTACA 59.458 38.462 0.00 0.00 41.35 2.74
4066 10492 7.067008 GCTTAGGGCATCTTGAATAAACTACAA 59.933 37.037 0.00 0.00 41.35 2.41
4085 10511 0.181114 AGGAGCATTTATCTGGCGCA 59.819 50.000 10.83 0.00 0.00 6.09
4241 10707 9.988815 AATCGATATTGAGCTACATTTTAGACT 57.011 29.630 0.00 0.00 0.00 3.24
4242 10708 9.632807 ATCGATATTGAGCTACATTTTAGACTC 57.367 33.333 0.00 0.00 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.462021 CCCATAAAGCTAGCTGTGACTC 58.538 50.000 20.16 0.00 0.00 3.36
1 2 2.420687 GCCCATAAAGCTAGCTGTGACT 60.421 50.000 20.16 0.00 0.00 3.41
4 5 0.940126 CGCCCATAAAGCTAGCTGTG 59.060 55.000 20.16 16.78 0.00 3.66
5 6 0.541863 ACGCCCATAAAGCTAGCTGT 59.458 50.000 20.16 16.49 0.00 4.40
6 7 1.331756 CAACGCCCATAAAGCTAGCTG 59.668 52.381 20.16 6.34 0.00 4.24
7 8 1.065418 ACAACGCCCATAAAGCTAGCT 60.065 47.619 12.68 12.68 0.00 3.32
8 9 1.064060 CACAACGCCCATAAAGCTAGC 59.936 52.381 6.62 6.62 0.00 3.42
9 10 1.670811 CCACAACGCCCATAAAGCTAG 59.329 52.381 0.00 0.00 0.00 3.42
11 12 0.251165 ACCACAACGCCCATAAAGCT 60.251 50.000 0.00 0.00 0.00 3.74
12 13 0.109319 CACCACAACGCCCATAAAGC 60.109 55.000 0.00 0.00 0.00 3.51
13 14 1.068610 CACACCACAACGCCCATAAAG 60.069 52.381 0.00 0.00 0.00 1.85
14 15 0.955178 CACACCACAACGCCCATAAA 59.045 50.000 0.00 0.00 0.00 1.40
15 16 1.519751 GCACACCACAACGCCCATAA 61.520 55.000 0.00 0.00 0.00 1.90
17 18 3.294493 GCACACCACAACGCCCAT 61.294 61.111 0.00 0.00 0.00 4.00
18 19 4.803908 TGCACACCACAACGCCCA 62.804 61.111 0.00 0.00 0.00 5.36
20 21 3.964875 CCTGCACACCACAACGCC 61.965 66.667 0.00 0.00 0.00 5.68
21 22 3.964875 CCCTGCACACCACAACGC 61.965 66.667 0.00 0.00 0.00 4.84
22 23 2.203139 TCCCTGCACACCACAACG 60.203 61.111 0.00 0.00 0.00 4.10
24 25 1.064003 ATAGTCCCTGCACACCACAA 58.936 50.000 0.00 0.00 0.00 3.33
25 26 0.324614 CATAGTCCCTGCACACCACA 59.675 55.000 0.00 0.00 0.00 4.17
26 27 0.613260 TCATAGTCCCTGCACACCAC 59.387 55.000 0.00 0.00 0.00 4.16
27 28 0.613260 GTCATAGTCCCTGCACACCA 59.387 55.000 0.00 0.00 0.00 4.17
32 33 1.951209 TGAAGGTCATAGTCCCTGCA 58.049 50.000 0.00 0.00 33.79 4.41
33 34 3.209410 CAATGAAGGTCATAGTCCCTGC 58.791 50.000 0.00 0.00 35.76 4.85
34 35 3.434167 CCCAATGAAGGTCATAGTCCCTG 60.434 52.174 0.00 0.00 35.76 4.45
35 36 2.780010 CCCAATGAAGGTCATAGTCCCT 59.220 50.000 0.00 0.00 35.76 4.20
36 37 2.749800 GCCCAATGAAGGTCATAGTCCC 60.750 54.545 0.00 0.00 35.76 4.46
37 38 2.173569 AGCCCAATGAAGGTCATAGTCC 59.826 50.000 0.00 0.00 35.76 3.85
38 39 3.567478 AGCCCAATGAAGGTCATAGTC 57.433 47.619 0.00 0.00 35.76 2.59
39 40 5.103940 ACAATAGCCCAATGAAGGTCATAGT 60.104 40.000 0.00 0.00 35.76 2.12
40 41 5.380043 ACAATAGCCCAATGAAGGTCATAG 58.620 41.667 0.00 0.00 35.76 2.23
41 42 5.387113 ACAATAGCCCAATGAAGGTCATA 57.613 39.130 0.00 0.00 35.76 2.15
43 44 3.737559 ACAATAGCCCAATGAAGGTCA 57.262 42.857 0.00 0.00 0.00 4.02
45 46 4.584638 TGTACAATAGCCCAATGAAGGT 57.415 40.909 0.00 0.00 0.00 3.50
47 48 5.221303 CCCAATGTACAATAGCCCAATGAAG 60.221 44.000 0.00 0.00 0.00 3.02
49 50 4.214310 CCCAATGTACAATAGCCCAATGA 58.786 43.478 0.00 0.00 0.00 2.57
51 52 2.965147 GCCCAATGTACAATAGCCCAAT 59.035 45.455 0.00 0.00 0.00 3.16
52 53 2.291865 TGCCCAATGTACAATAGCCCAA 60.292 45.455 0.00 0.00 0.00 4.12
53 54 1.286257 TGCCCAATGTACAATAGCCCA 59.714 47.619 0.00 0.00 0.00 5.36
54 55 2.065899 TGCCCAATGTACAATAGCCC 57.934 50.000 0.00 0.00 0.00 5.19
56 57 2.288395 GCCATGCCCAATGTACAATAGC 60.288 50.000 0.00 1.43 34.11 2.97
57 58 2.297033 GGCCATGCCCAATGTACAATAG 59.703 50.000 0.00 0.00 44.06 1.73
58 59 2.315176 GGCCATGCCCAATGTACAATA 58.685 47.619 0.00 0.00 44.06 1.90
59 60 1.122227 GGCCATGCCCAATGTACAAT 58.878 50.000 0.00 0.00 44.06 2.71
60 61 2.589494 GGCCATGCCCAATGTACAA 58.411 52.632 0.00 0.00 44.06 2.41
61 62 4.353325 GGCCATGCCCAATGTACA 57.647 55.556 0.00 0.00 44.06 2.90
71 72 1.136891 GTAACCCAATGAAGGCCATGC 59.863 52.381 5.01 0.00 35.24 4.06
72 73 2.738743 AGTAACCCAATGAAGGCCATG 58.261 47.619 5.01 0.00 35.24 3.66
73 74 3.473113 AAGTAACCCAATGAAGGCCAT 57.527 42.857 5.01 0.00 36.99 4.40
74 75 2.990740 AAGTAACCCAATGAAGGCCA 57.009 45.000 5.01 0.00 0.00 5.36
75 76 3.128068 CGTAAAGTAACCCAATGAAGGCC 59.872 47.826 0.00 0.00 0.00 5.19
76 77 3.754850 ACGTAAAGTAACCCAATGAAGGC 59.245 43.478 0.00 0.00 0.00 4.35
78 79 5.929992 TCAGACGTAAAGTAACCCAATGAAG 59.070 40.000 0.00 0.00 0.00 3.02
79 80 5.856156 TCAGACGTAAAGTAACCCAATGAA 58.144 37.500 0.00 0.00 0.00 2.57
80 81 5.011329 ACTCAGACGTAAAGTAACCCAATGA 59.989 40.000 0.00 0.00 0.00 2.57
81 82 5.120208 CACTCAGACGTAAAGTAACCCAATG 59.880 44.000 0.00 0.00 0.00 2.82
82 83 5.221581 ACACTCAGACGTAAAGTAACCCAAT 60.222 40.000 0.00 0.00 0.00 3.16
83 84 4.099881 ACACTCAGACGTAAAGTAACCCAA 59.900 41.667 0.00 0.00 0.00 4.12
87 88 4.678742 GGACACACTCAGACGTAAAGTAAC 59.321 45.833 0.00 0.00 0.00 2.50
88 89 4.581824 AGGACACACTCAGACGTAAAGTAA 59.418 41.667 0.00 0.00 0.00 2.24
89 90 4.139786 AGGACACACTCAGACGTAAAGTA 58.860 43.478 0.00 0.00 0.00 2.24
90 91 2.957006 AGGACACACTCAGACGTAAAGT 59.043 45.455 0.00 0.00 0.00 2.66
91 92 3.644884 AGGACACACTCAGACGTAAAG 57.355 47.619 0.00 0.00 0.00 1.85
92 93 3.131577 ACAAGGACACACTCAGACGTAAA 59.868 43.478 0.00 0.00 0.00 2.01
93 94 2.691526 ACAAGGACACACTCAGACGTAA 59.308 45.455 0.00 0.00 0.00 3.18
94 95 2.304092 ACAAGGACACACTCAGACGTA 58.696 47.619 0.00 0.00 0.00 3.57
95 96 1.112113 ACAAGGACACACTCAGACGT 58.888 50.000 0.00 0.00 0.00 4.34
97 98 3.555168 CCCTAACAAGGACACACTCAGAC 60.555 52.174 0.00 0.00 0.00 3.51
98 99 2.632996 CCCTAACAAGGACACACTCAGA 59.367 50.000 0.00 0.00 0.00 3.27
100 101 1.071699 GCCCTAACAAGGACACACTCA 59.928 52.381 0.00 0.00 0.00 3.41
102 103 1.435256 AGCCCTAACAAGGACACACT 58.565 50.000 0.00 0.00 0.00 3.55
105 106 1.880027 CACAAGCCCTAACAAGGACAC 59.120 52.381 0.00 0.00 0.00 3.67
106 107 1.202879 CCACAAGCCCTAACAAGGACA 60.203 52.381 0.00 0.00 0.00 4.02
107 108 1.202891 ACCACAAGCCCTAACAAGGAC 60.203 52.381 0.00 0.00 0.00 3.85
108 109 1.145571 ACCACAAGCCCTAACAAGGA 58.854 50.000 0.00 0.00 0.00 3.36
110 111 1.880027 GTCACCACAAGCCCTAACAAG 59.120 52.381 0.00 0.00 0.00 3.16
111 112 1.493022 AGTCACCACAAGCCCTAACAA 59.507 47.619 0.00 0.00 0.00 2.83
112 113 1.071699 GAGTCACCACAAGCCCTAACA 59.928 52.381 0.00 0.00 0.00 2.41
113 114 1.348036 AGAGTCACCACAAGCCCTAAC 59.652 52.381 0.00 0.00 0.00 2.34
115 116 1.729586 AAGAGTCACCACAAGCCCTA 58.270 50.000 0.00 0.00 0.00 3.53
116 117 0.846693 AAAGAGTCACCACAAGCCCT 59.153 50.000 0.00 0.00 0.00 5.19
117 118 1.609072 GAAAAGAGTCACCACAAGCCC 59.391 52.381 0.00 0.00 0.00 5.19
119 120 2.682856 TGTGAAAAGAGTCACCACAAGC 59.317 45.455 3.06 0.00 46.13 4.01
121 122 4.946772 TGATTGTGAAAAGAGTCACCACAA 59.053 37.500 16.32 16.32 46.13 3.33
122 123 4.522114 TGATTGTGAAAAGAGTCACCACA 58.478 39.130 3.06 0.00 46.13 4.17
123 124 5.499139 TTGATTGTGAAAAGAGTCACCAC 57.501 39.130 3.06 0.00 46.13 4.16
124 125 5.507817 GCATTGATTGTGAAAAGAGTCACCA 60.508 40.000 3.06 0.00 46.13 4.17
125 126 4.919754 GCATTGATTGTGAAAAGAGTCACC 59.080 41.667 3.06 0.00 46.13 4.02
127 128 5.771153 TGCATTGATTGTGAAAAGAGTCA 57.229 34.783 0.00 0.00 0.00 3.41
128 129 6.864685 TCATTGCATTGATTGTGAAAAGAGTC 59.135 34.615 7.19 0.00 0.00 3.36
129 130 6.751157 TCATTGCATTGATTGTGAAAAGAGT 58.249 32.000 7.19 0.00 0.00 3.24
131 132 7.494952 TGTTTCATTGCATTGATTGTGAAAAGA 59.505 29.630 11.82 0.00 37.33 2.52
132 133 7.631822 TGTTTCATTGCATTGATTGTGAAAAG 58.368 30.769 11.82 0.00 37.33 2.27
133 134 7.549615 TGTTTCATTGCATTGATTGTGAAAA 57.450 28.000 11.82 0.00 37.33 2.29
135 136 8.828688 TTATGTTTCATTGCATTGATTGTGAA 57.171 26.923 11.82 1.00 0.00 3.18
136 137 8.828688 TTTATGTTTCATTGCATTGATTGTGA 57.171 26.923 11.82 0.00 0.00 3.58
137 138 7.690637 GCTTTATGTTTCATTGCATTGATTGTG 59.309 33.333 11.82 0.68 0.00 3.33
138 139 7.604927 AGCTTTATGTTTCATTGCATTGATTGT 59.395 29.630 11.82 2.79 0.00 2.71
139 140 7.970384 AGCTTTATGTTTCATTGCATTGATTG 58.030 30.769 11.82 0.00 0.00 2.67
140 141 8.556213 AAGCTTTATGTTTCATTGCATTGATT 57.444 26.923 11.82 0.00 0.00 2.57
141 142 8.556213 AAAGCTTTATGTTTCATTGCATTGAT 57.444 26.923 10.72 0.52 0.00 2.57
142 143 7.966246 AAAGCTTTATGTTTCATTGCATTGA 57.034 28.000 10.72 7.19 0.00 2.57
143 144 8.500773 AGAAAAGCTTTATGTTTCATTGCATTG 58.499 29.630 13.10 2.08 34.40 2.82
144 145 8.611654 AGAAAAGCTTTATGTTTCATTGCATT 57.388 26.923 13.10 0.00 34.40 3.56
145 146 7.062605 CGAGAAAAGCTTTATGTTTCATTGCAT 59.937 33.333 13.10 0.00 34.40 3.96
146 147 6.363088 CGAGAAAAGCTTTATGTTTCATTGCA 59.637 34.615 13.10 0.00 34.40 4.08
147 148 6.582295 TCGAGAAAAGCTTTATGTTTCATTGC 59.418 34.615 13.10 0.00 34.40 3.56
149 150 8.968242 GTTTCGAGAAAAGCTTTATGTTTCATT 58.032 29.630 13.10 0.00 34.40 2.57
151 152 7.476667 TGTTTCGAGAAAAGCTTTATGTTTCA 58.523 30.769 13.10 3.35 34.40 2.69
152 153 7.855904 TCTGTTTCGAGAAAAGCTTTATGTTTC 59.144 33.333 13.10 5.91 31.33 2.78
153 154 7.703328 TCTGTTTCGAGAAAAGCTTTATGTTT 58.297 30.769 13.10 0.00 31.33 2.83
154 155 7.259290 TCTGTTTCGAGAAAAGCTTTATGTT 57.741 32.000 13.10 0.00 31.33 2.71
155 156 6.861065 TCTGTTTCGAGAAAAGCTTTATGT 57.139 33.333 13.10 0.00 31.33 2.29
157 158 7.544566 TCGTATCTGTTTCGAGAAAAGCTTTAT 59.455 33.333 13.10 4.17 31.33 1.40
158 159 6.864685 TCGTATCTGTTTCGAGAAAAGCTTTA 59.135 34.615 13.10 0.00 31.33 1.85
160 161 5.118817 GTCGTATCTGTTTCGAGAAAAGCTT 59.881 40.000 0.00 0.00 34.33 3.74
161 162 4.621886 GTCGTATCTGTTTCGAGAAAAGCT 59.378 41.667 0.00 0.00 34.33 3.74
162 163 4.621886 AGTCGTATCTGTTTCGAGAAAAGC 59.378 41.667 0.00 0.00 34.33 3.51
164 165 6.563381 GCAAAGTCGTATCTGTTTCGAGAAAA 60.563 38.462 0.00 0.00 34.33 2.29
166 167 4.384846 GCAAAGTCGTATCTGTTTCGAGAA 59.615 41.667 0.00 0.00 34.33 2.87
167 168 3.918591 GCAAAGTCGTATCTGTTTCGAGA 59.081 43.478 0.00 0.00 34.33 4.04
168 169 3.921021 AGCAAAGTCGTATCTGTTTCGAG 59.079 43.478 0.00 0.00 34.33 4.04
169 170 3.909430 AGCAAAGTCGTATCTGTTTCGA 58.091 40.909 0.00 0.00 0.00 3.71
170 171 3.673338 TGAGCAAAGTCGTATCTGTTTCG 59.327 43.478 0.00 0.00 0.00 3.46
171 172 5.591643 TTGAGCAAAGTCGTATCTGTTTC 57.408 39.130 0.00 0.00 0.00 2.78
172 173 5.558273 CGTTTGAGCAAAGTCGTATCTGTTT 60.558 40.000 0.00 0.00 0.00 2.83
174 175 3.428870 CGTTTGAGCAAAGTCGTATCTGT 59.571 43.478 0.00 0.00 0.00 3.41
176 177 3.650139 ACGTTTGAGCAAAGTCGTATCT 58.350 40.909 9.05 0.00 33.31 1.98
178 179 3.650139 AGACGTTTGAGCAAAGTCGTAT 58.350 40.909 10.31 6.16 34.58 3.06
179 180 3.088194 AGACGTTTGAGCAAAGTCGTA 57.912 42.857 10.31 0.00 34.58 3.43
181 182 4.386230 CAATAGACGTTTGAGCAAAGTCG 58.614 43.478 14.15 10.21 35.55 4.18
185 186 4.764679 ATGCAATAGACGTTTGAGCAAA 57.235 36.364 2.67 0.00 33.91 3.68
187 188 4.215185 TGAAATGCAATAGACGTTTGAGCA 59.785 37.500 2.67 4.61 34.78 4.26
189 190 6.545508 TCATGAAATGCAATAGACGTTTGAG 58.454 36.000 2.67 0.00 46.21 3.02
190 191 6.493449 TCATGAAATGCAATAGACGTTTGA 57.507 33.333 2.67 0.00 46.21 2.69
191 192 5.228635 GCTCATGAAATGCAATAGACGTTTG 59.771 40.000 0.00 0.00 46.21 2.93
192 193 5.335127 GCTCATGAAATGCAATAGACGTTT 58.665 37.500 0.00 0.00 46.21 3.60
193 194 4.201950 GGCTCATGAAATGCAATAGACGTT 60.202 41.667 7.62 0.00 46.21 3.99
194 195 3.313526 GGCTCATGAAATGCAATAGACGT 59.686 43.478 7.62 0.00 46.21 4.34
195 196 3.313249 TGGCTCATGAAATGCAATAGACG 59.687 43.478 7.62 0.00 46.21 4.18
196 197 4.906065 TGGCTCATGAAATGCAATAGAC 57.094 40.909 7.62 0.00 46.21 2.59
197 198 5.918426 TTTGGCTCATGAAATGCAATAGA 57.082 34.783 7.62 0.00 46.21 1.98
198 199 6.035650 CAGTTTTGGCTCATGAAATGCAATAG 59.964 38.462 7.62 0.00 46.21 1.73
199 200 5.870433 CAGTTTTGGCTCATGAAATGCAATA 59.130 36.000 7.62 0.00 46.21 1.90
200 201 4.693566 CAGTTTTGGCTCATGAAATGCAAT 59.306 37.500 7.62 0.00 46.21 3.56
202 203 3.555377 CCAGTTTTGGCTCATGAAATGCA 60.555 43.478 7.62 0.00 40.26 3.96
217 218 5.279758 GGGCAACATTATAACCACCAGTTTT 60.280 40.000 0.00 0.00 38.04 2.43
218 219 4.221924 GGGCAACATTATAACCACCAGTTT 59.778 41.667 0.00 0.00 38.04 2.66
219 220 3.767131 GGGCAACATTATAACCACCAGTT 59.233 43.478 0.00 0.00 39.95 3.16
220 221 3.361786 GGGCAACATTATAACCACCAGT 58.638 45.455 0.00 0.00 39.74 4.00
221 222 2.693074 GGGGCAACATTATAACCACCAG 59.307 50.000 0.00 0.00 39.74 4.00
222 223 2.043115 TGGGGCAACATTATAACCACCA 59.957 45.455 0.00 0.00 39.74 4.17
223 224 2.741145 TGGGGCAACATTATAACCACC 58.259 47.619 0.00 0.00 39.74 4.61
224 225 4.810191 TTTGGGGCAACATTATAACCAC 57.190 40.909 0.00 0.00 39.74 4.16
226 227 6.463360 CCATATTTGGGGCAACATTATAACC 58.537 40.000 0.00 0.00 39.56 2.85
239 240 0.113190 GGAGGGAGCCATATTTGGGG 59.887 60.000 4.23 0.00 43.84 4.96
240 241 0.852842 TGGAGGGAGCCATATTTGGG 59.147 55.000 4.23 0.00 43.84 4.12
241 242 2.986534 ATGGAGGGAGCCATATTTGG 57.013 50.000 0.00 0.00 46.56 3.28
248 249 2.326529 ATACGGGATGGAGGGAGCCA 62.327 60.000 0.00 0.00 43.23 4.75
249 250 1.128188 AATACGGGATGGAGGGAGCC 61.128 60.000 0.00 0.00 0.00 4.70
250 251 1.640917 TAATACGGGATGGAGGGAGC 58.359 55.000 0.00 0.00 0.00 4.70
251 252 4.286032 TCAATTAATACGGGATGGAGGGAG 59.714 45.833 0.00 0.00 0.00 4.30
252 253 4.041198 GTCAATTAATACGGGATGGAGGGA 59.959 45.833 0.00 0.00 0.00 4.20
253 254 4.202419 TGTCAATTAATACGGGATGGAGGG 60.202 45.833 0.00 0.00 0.00 4.30
254 255 4.755123 GTGTCAATTAATACGGGATGGAGG 59.245 45.833 0.00 0.00 0.00 4.30
255 256 5.611374 AGTGTCAATTAATACGGGATGGAG 58.389 41.667 0.00 0.00 0.00 3.86
256 257 5.129650 TGAGTGTCAATTAATACGGGATGGA 59.870 40.000 0.00 0.00 0.00 3.41
257 258 5.364778 TGAGTGTCAATTAATACGGGATGG 58.635 41.667 0.00 0.00 0.00 3.51
258 259 6.918892 TTGAGTGTCAATTAATACGGGATG 57.081 37.500 0.00 0.00 30.26 3.51
259 260 6.486657 CCATTGAGTGTCAATTAATACGGGAT 59.513 38.462 0.00 0.00 44.03 3.85
260 261 5.820423 CCATTGAGTGTCAATTAATACGGGA 59.180 40.000 0.00 0.00 44.03 5.14
261 262 5.820423 TCCATTGAGTGTCAATTAATACGGG 59.180 40.000 0.00 0.00 44.03 5.28
262 263 6.918892 TCCATTGAGTGTCAATTAATACGG 57.081 37.500 0.00 0.00 44.03 4.02
263 264 7.919690 ACATCCATTGAGTGTCAATTAATACG 58.080 34.615 0.00 0.00 44.03 3.06
271 272 8.511321 GTGTTAAATACATCCATTGAGTGTCAA 58.489 33.333 0.00 0.00 38.81 3.18
272 273 7.882791 AGTGTTAAATACATCCATTGAGTGTCA 59.117 33.333 0.00 0.00 39.39 3.58
273 274 8.177663 CAGTGTTAAATACATCCATTGAGTGTC 58.822 37.037 0.00 0.00 39.39 3.67
274 275 7.882791 TCAGTGTTAAATACATCCATTGAGTGT 59.117 33.333 0.00 0.00 39.39 3.55
275 276 8.267620 TCAGTGTTAAATACATCCATTGAGTG 57.732 34.615 0.00 0.00 39.39 3.51
276 277 8.321353 TCTCAGTGTTAAATACATCCATTGAGT 58.679 33.333 0.00 0.00 39.39 3.41
277 278 8.722480 TCTCAGTGTTAAATACATCCATTGAG 57.278 34.615 0.00 0.00 39.39 3.02
278 279 9.112725 CATCTCAGTGTTAAATACATCCATTGA 57.887 33.333 0.00 0.00 39.39 2.57
279 280 7.859377 GCATCTCAGTGTTAAATACATCCATTG 59.141 37.037 0.00 0.00 39.39 2.82
280 281 7.254898 CGCATCTCAGTGTTAAATACATCCATT 60.255 37.037 0.00 0.00 39.39 3.16
281 282 6.203530 CGCATCTCAGTGTTAAATACATCCAT 59.796 38.462 0.00 0.00 39.39 3.41
282 283 5.523552 CGCATCTCAGTGTTAAATACATCCA 59.476 40.000 0.00 0.00 39.39 3.41
283 284 5.523916 ACGCATCTCAGTGTTAAATACATCC 59.476 40.000 0.00 0.00 39.39 3.51
284 285 6.477033 AGACGCATCTCAGTGTTAAATACATC 59.523 38.462 0.00 0.00 39.39 3.06
285 286 6.341316 AGACGCATCTCAGTGTTAAATACAT 58.659 36.000 0.00 0.00 39.39 2.29
286 287 5.720202 AGACGCATCTCAGTGTTAAATACA 58.280 37.500 0.00 0.00 31.30 2.29
287 288 7.932120 ATAGACGCATCTCAGTGTTAAATAC 57.068 36.000 0.00 0.00 36.29 1.89
289 290 9.627395 GTATATAGACGCATCTCAGTGTTAAAT 57.373 33.333 0.00 0.00 36.29 1.40
290 291 8.626526 TGTATATAGACGCATCTCAGTGTTAAA 58.373 33.333 0.00 0.00 36.29 1.52
291 292 8.161699 TGTATATAGACGCATCTCAGTGTTAA 57.838 34.615 0.00 0.00 36.29 2.01
292 293 7.739498 TGTATATAGACGCATCTCAGTGTTA 57.261 36.000 0.00 0.00 36.29 2.41
293 294 6.635030 TGTATATAGACGCATCTCAGTGTT 57.365 37.500 0.00 0.00 36.29 3.32
294 295 6.657117 AGATGTATATAGACGCATCTCAGTGT 59.343 38.462 7.45 0.00 42.88 3.55
295 296 6.966066 CAGATGTATATAGACGCATCTCAGTG 59.034 42.308 9.51 0.00 44.10 3.66
296 297 6.657117 ACAGATGTATATAGACGCATCTCAGT 59.343 38.462 9.51 5.13 44.10 3.41
297 298 7.082700 ACAGATGTATATAGACGCATCTCAG 57.917 40.000 9.51 4.67 44.10 3.35
298 299 7.454260 AACAGATGTATATAGACGCATCTCA 57.546 36.000 9.51 0.00 44.10 3.27
299 300 8.023706 TCAAACAGATGTATATAGACGCATCTC 58.976 37.037 9.51 0.00 44.10 2.75
300 301 7.886338 TCAAACAGATGTATATAGACGCATCT 58.114 34.615 7.45 7.45 46.04 2.90
301 302 7.201393 GCTCAAACAGATGTATATAGACGCATC 60.201 40.741 3.85 3.85 38.30 3.91
302 303 6.587990 GCTCAAACAGATGTATATAGACGCAT 59.412 38.462 0.00 0.00 0.00 4.73
303 304 5.920840 GCTCAAACAGATGTATATAGACGCA 59.079 40.000 0.00 0.00 0.00 5.24
304 305 5.059832 CGCTCAAACAGATGTATATAGACGC 59.940 44.000 0.00 0.00 0.00 5.19
305 306 6.371389 TCGCTCAAACAGATGTATATAGACG 58.629 40.000 0.00 0.00 0.00 4.18
314 315 8.939929 CCATATTAATATCGCTCAAACAGATGT 58.060 33.333 4.93 0.00 0.00 3.06
315 316 7.907045 GCCATATTAATATCGCTCAAACAGATG 59.093 37.037 15.40 0.00 0.00 2.90
316 317 7.607607 TGCCATATTAATATCGCTCAAACAGAT 59.392 33.333 20.99 0.00 29.78 2.90
317 318 6.934083 TGCCATATTAATATCGCTCAAACAGA 59.066 34.615 20.99 1.38 29.78 3.41
318 319 7.017645 GTGCCATATTAATATCGCTCAAACAG 58.982 38.462 20.99 2.15 29.78 3.16
319 320 6.347321 CGTGCCATATTAATATCGCTCAAACA 60.347 38.462 20.99 2.57 29.78 2.83
320 321 6.015504 CGTGCCATATTAATATCGCTCAAAC 58.984 40.000 20.99 12.39 29.78 2.93
321 322 5.929415 TCGTGCCATATTAATATCGCTCAAA 59.071 36.000 20.99 9.54 29.78 2.69
322 323 5.474825 TCGTGCCATATTAATATCGCTCAA 58.525 37.500 20.99 5.43 29.78 3.02
323 324 5.066968 TCGTGCCATATTAATATCGCTCA 57.933 39.130 20.99 9.47 29.78 4.26
324 325 5.005779 CCTTCGTGCCATATTAATATCGCTC 59.994 44.000 20.99 17.29 29.78 5.03
325 326 4.870426 CCTTCGTGCCATATTAATATCGCT 59.130 41.667 20.99 0.00 29.78 4.93
326 327 4.034048 CCCTTCGTGCCATATTAATATCGC 59.966 45.833 15.71 15.71 0.00 4.58
327 328 5.416083 TCCCTTCGTGCCATATTAATATCG 58.584 41.667 4.93 6.49 0.00 2.92
328 329 7.865706 AATCCCTTCGTGCCATATTAATATC 57.134 36.000 4.93 0.00 0.00 1.63
329 330 8.548877 ACTAATCCCTTCGTGCCATATTAATAT 58.451 33.333 1.91 1.91 0.00 1.28
330 331 7.913789 ACTAATCCCTTCGTGCCATATTAATA 58.086 34.615 0.00 0.00 0.00 0.98
331 332 6.779860 ACTAATCCCTTCGTGCCATATTAAT 58.220 36.000 0.00 0.00 0.00 1.40
332 333 6.182507 ACTAATCCCTTCGTGCCATATTAA 57.817 37.500 0.00 0.00 0.00 1.40
333 334 5.818678 ACTAATCCCTTCGTGCCATATTA 57.181 39.130 0.00 0.00 0.00 0.98
334 335 4.706842 ACTAATCCCTTCGTGCCATATT 57.293 40.909 0.00 0.00 0.00 1.28
335 336 4.706842 AACTAATCCCTTCGTGCCATAT 57.293 40.909 0.00 0.00 0.00 1.78
336 337 4.497291 AAACTAATCCCTTCGTGCCATA 57.503 40.909 0.00 0.00 0.00 2.74
337 338 3.366052 AAACTAATCCCTTCGTGCCAT 57.634 42.857 0.00 0.00 0.00 4.40
338 339 2.871096 AAACTAATCCCTTCGTGCCA 57.129 45.000 0.00 0.00 0.00 4.92
339 340 5.124936 ACATAAAAACTAATCCCTTCGTGCC 59.875 40.000 0.00 0.00 0.00 5.01
340 341 6.190954 ACATAAAAACTAATCCCTTCGTGC 57.809 37.500 0.00 0.00 0.00 5.34
450 606 9.953565 GAGAGAGAGGTAGTATAACATGTCTAT 57.046 37.037 0.00 2.50 34.40 1.98
451 607 8.935741 TGAGAGAGAGGTAGTATAACATGTCTA 58.064 37.037 0.00 0.00 34.40 2.59
452 608 7.807198 TGAGAGAGAGGTAGTATAACATGTCT 58.193 38.462 0.00 0.00 36.61 3.41
453 609 7.717875 ACTGAGAGAGAGGTAGTATAACATGTC 59.282 40.741 0.00 0.00 0.00 3.06
454 610 7.579105 ACTGAGAGAGAGGTAGTATAACATGT 58.421 38.462 0.00 0.00 0.00 3.21
455 611 8.458573 AACTGAGAGAGAGGTAGTATAACATG 57.541 38.462 0.00 0.00 0.00 3.21
457 613 9.393512 GTAAACTGAGAGAGAGGTAGTATAACA 57.606 37.037 0.00 0.00 0.00 2.41
459 615 9.616156 CTGTAAACTGAGAGAGAGGTAGTATAA 57.384 37.037 0.00 0.00 0.00 0.98
460 616 8.990203 TCTGTAAACTGAGAGAGAGGTAGTATA 58.010 37.037 0.00 0.00 0.00 1.47
461 617 7.863722 TCTGTAAACTGAGAGAGAGGTAGTAT 58.136 38.462 0.00 0.00 0.00 2.12
462 618 7.255199 TCTGTAAACTGAGAGAGAGGTAGTA 57.745 40.000 0.00 0.00 0.00 1.82
465 621 4.944930 GCTCTGTAAACTGAGAGAGAGGTA 59.055 45.833 18.00 0.00 42.37 3.08
467 623 3.761218 TGCTCTGTAAACTGAGAGAGAGG 59.239 47.826 18.00 0.00 42.37 3.69
468 624 5.384063 TTGCTCTGTAAACTGAGAGAGAG 57.616 43.478 18.00 5.20 42.37 3.20
469 625 4.321601 GCTTGCTCTGTAAACTGAGAGAGA 60.322 45.833 18.00 2.96 42.37 3.10
470 626 3.925913 GCTTGCTCTGTAAACTGAGAGAG 59.074 47.826 18.00 14.52 42.37 3.20
471 627 3.612717 CGCTTGCTCTGTAAACTGAGAGA 60.613 47.826 18.00 6.81 42.37 3.10
472 628 2.665537 CGCTTGCTCTGTAAACTGAGAG 59.334 50.000 18.00 10.01 42.37 3.20
473 629 2.677199 CGCTTGCTCTGTAAACTGAGA 58.323 47.619 18.00 3.98 42.37 3.27
474 630 1.127582 GCGCTTGCTCTGTAAACTGAG 59.872 52.381 0.00 11.45 42.56 3.35
475 631 1.148310 GCGCTTGCTCTGTAAACTGA 58.852 50.000 0.00 0.00 35.07 3.41
476 632 0.179240 CGCGCTTGCTCTGTAAACTG 60.179 55.000 5.56 0.00 36.08 3.16
479 635 1.065358 GTACGCGCTTGCTCTGTAAA 58.935 50.000 5.73 0.00 36.08 2.01
480 636 0.734942 GGTACGCGCTTGCTCTGTAA 60.735 55.000 5.73 0.00 36.08 2.41
483 639 3.188786 GGGTACGCGCTTGCTCTG 61.189 66.667 5.73 0.00 36.08 3.35
493 649 2.869233 TTAACGACATAGGGGTACGC 57.131 50.000 0.29 0.29 43.76 4.42
494 650 5.232838 GTCAAATTAACGACATAGGGGTACG 59.767 44.000 0.00 0.00 32.24 3.67
495 651 5.525012 GGTCAAATTAACGACATAGGGGTAC 59.475 44.000 0.00 0.00 33.66 3.34
496 652 5.189342 TGGTCAAATTAACGACATAGGGGTA 59.811 40.000 0.00 0.00 33.66 3.69
497 653 4.019141 TGGTCAAATTAACGACATAGGGGT 60.019 41.667 0.00 0.00 33.66 4.95
498 654 4.519213 TGGTCAAATTAACGACATAGGGG 58.481 43.478 0.00 0.00 33.66 4.79
499 655 5.646360 AGTTGGTCAAATTAACGACATAGGG 59.354 40.000 0.00 0.00 33.66 3.53
500 656 6.737254 AGTTGGTCAAATTAACGACATAGG 57.263 37.500 0.00 0.00 33.66 2.57
504 660 9.053840 TGTATTAAGTTGGTCAAATTAACGACA 57.946 29.630 15.42 17.26 41.57 4.35
505 661 9.881529 TTGTATTAAGTTGGTCAAATTAACGAC 57.118 29.630 15.42 15.60 41.57 4.34
507 663 9.887406 ACTTGTATTAAGTTGGTCAAATTAACG 57.113 29.630 15.42 7.39 41.57 3.18
613 1367 9.212593 AGGTTGCCAATTTTATCACCTTAATAT 57.787 29.630 0.00 0.00 0.00 1.28
614 1368 8.602472 AGGTTGCCAATTTTATCACCTTAATA 57.398 30.769 0.00 0.00 0.00 0.98
618 1372 5.422012 CCTAGGTTGCCAATTTTATCACCTT 59.578 40.000 0.00 0.00 0.00 3.50
619 1373 4.956075 CCTAGGTTGCCAATTTTATCACCT 59.044 41.667 0.00 0.00 0.00 4.00
620 1374 4.709886 ACCTAGGTTGCCAATTTTATCACC 59.290 41.667 9.21 0.00 0.00 4.02
621 1375 5.914898 ACCTAGGTTGCCAATTTTATCAC 57.085 39.130 9.21 0.00 0.00 3.06
623 1377 7.443272 ACGTATACCTAGGTTGCCAATTTTATC 59.557 37.037 22.11 0.00 0.00 1.75
625 3650 6.539464 CACGTATACCTAGGTTGCCAATTTTA 59.461 38.462 22.11 0.00 0.00 1.52
630 3655 2.833338 ACACGTATACCTAGGTTGCCAA 59.167 45.455 22.11 0.75 0.00 4.52
637 3662 9.507329 TTTATAAGTCCTACACGTATACCTAGG 57.493 37.037 7.41 7.41 33.24 3.02
641 3666 8.840321 TCAGTTTATAAGTCCTACACGTATACC 58.160 37.037 0.00 0.00 33.24 2.73
645 3670 7.750458 CGTTTCAGTTTATAAGTCCTACACGTA 59.250 37.037 0.00 0.00 0.00 3.57
648 3673 7.092716 TCCGTTTCAGTTTATAAGTCCTACAC 58.907 38.462 0.00 0.00 0.00 2.90
649 3674 7.230849 TCCGTTTCAGTTTATAAGTCCTACA 57.769 36.000 0.00 0.00 0.00 2.74
651 3676 6.438425 ACCTCCGTTTCAGTTTATAAGTCCTA 59.562 38.462 0.00 0.00 0.00 2.94
652 3677 5.247792 ACCTCCGTTTCAGTTTATAAGTCCT 59.752 40.000 0.00 0.00 0.00 3.85
653 3678 5.485620 ACCTCCGTTTCAGTTTATAAGTCC 58.514 41.667 0.00 0.00 0.00 3.85
655 3680 7.237209 ACTACCTCCGTTTCAGTTTATAAGT 57.763 36.000 0.00 0.00 0.00 2.24
657 3682 8.353423 ACTACTACCTCCGTTTCAGTTTATAA 57.647 34.615 0.00 0.00 0.00 0.98
658 3683 7.944729 ACTACTACCTCCGTTTCAGTTTATA 57.055 36.000 0.00 0.00 0.00 0.98
659 3684 6.847421 ACTACTACCTCCGTTTCAGTTTAT 57.153 37.500 0.00 0.00 0.00 1.40
660 3685 7.944729 ATACTACTACCTCCGTTTCAGTTTA 57.055 36.000 0.00 0.00 0.00 2.01
662 3687 8.530804 AATATACTACTACCTCCGTTTCAGTT 57.469 34.615 0.00 0.00 0.00 3.16
664 3689 8.411683 ACAAATATACTACTACCTCCGTTTCAG 58.588 37.037 0.00 0.00 0.00 3.02
665 3690 8.297470 ACAAATATACTACTACCTCCGTTTCA 57.703 34.615 0.00 0.00 0.00 2.69
666 3691 9.242477 GAACAAATATACTACTACCTCCGTTTC 57.758 37.037 0.00 0.00 0.00 2.78
668 3693 8.193438 GTGAACAAATATACTACTACCTCCGTT 58.807 37.037 0.00 0.00 0.00 4.44
669 3694 7.559170 AGTGAACAAATATACTACTACCTCCGT 59.441 37.037 0.00 0.00 0.00 4.69
671 3696 8.910944 TGAGTGAACAAATATACTACTACCTCC 58.089 37.037 0.00 0.00 0.00 4.30
689 3714 9.869844 GCTGTATACATAATGAAATGAGTGAAC 57.130 33.333 5.91 0.00 0.00 3.18
690 3715 9.056005 GGCTGTATACATAATGAAATGAGTGAA 57.944 33.333 5.91 0.00 0.00 3.18
754 6476 8.147642 ACATTCTGATTTTATTAGCTCCTTCG 57.852 34.615 0.00 0.00 0.00 3.79
804 6526 0.893727 GGTTGGTTCGTCTTGCCCAT 60.894 55.000 0.00 0.00 0.00 4.00
905 6627 1.075425 CTGCCGAAGAACAGAGAGCG 61.075 60.000 0.00 0.00 34.20 5.03
962 6684 2.068277 GATGGAGATTGCCGGCTTGC 62.068 60.000 29.70 16.17 0.00 4.01
964 6686 1.152881 GGATGGAGATTGCCGGCTT 60.153 57.895 29.70 15.71 0.00 4.35
996 6718 4.647611 TGATTGCCCGTTCTTTCTTTAGA 58.352 39.130 0.00 0.00 0.00 2.10
997 6719 4.695455 TCTGATTGCCCGTTCTTTCTTTAG 59.305 41.667 0.00 0.00 0.00 1.85
998 6720 4.647611 TCTGATTGCCCGTTCTTTCTTTA 58.352 39.130 0.00 0.00 0.00 1.85
999 6721 3.486383 TCTGATTGCCCGTTCTTTCTTT 58.514 40.909 0.00 0.00 0.00 2.52
1001 6723 2.859165 TCTGATTGCCCGTTCTTTCT 57.141 45.000 0.00 0.00 0.00 2.52
1002 6724 3.826466 CTTTCTGATTGCCCGTTCTTTC 58.174 45.455 0.00 0.00 0.00 2.62
1003 6725 2.029918 GCTTTCTGATTGCCCGTTCTTT 60.030 45.455 0.00 0.00 0.00 2.52
1004 6726 1.541588 GCTTTCTGATTGCCCGTTCTT 59.458 47.619 0.00 0.00 0.00 2.52
1005 6727 1.168714 GCTTTCTGATTGCCCGTTCT 58.831 50.000 0.00 0.00 0.00 3.01
1006 6728 0.171231 GGCTTTCTGATTGCCCGTTC 59.829 55.000 9.44 0.00 40.71 3.95
1087 6816 2.512515 GGTGGCTGTGCTCGATCC 60.513 66.667 0.00 0.00 0.00 3.36
1414 7161 2.420890 GGAGAGCGCATCCAGGAG 59.579 66.667 22.66 0.00 36.79 3.69
1446 7193 5.370880 AGTGTCCAATAATTCAGGGCTAGAT 59.629 40.000 0.00 0.00 0.00 1.98
1461 7208 0.774908 TTCCCCCGAAAGTGTCCAAT 59.225 50.000 0.00 0.00 0.00 3.16
1469 7216 1.227383 CCCCTGATTCCCCCGAAAG 59.773 63.158 0.00 0.00 0.00 2.62
1473 7220 2.690881 TGACCCCTGATTCCCCCG 60.691 66.667 0.00 0.00 0.00 5.73
1478 7225 0.902531 TCCGAACTGACCCCTGATTC 59.097 55.000 0.00 0.00 0.00 2.52
1495 7255 2.568546 ATTCCCTTTTCCCCCAATCC 57.431 50.000 0.00 0.00 0.00 3.01
1496 7256 3.724478 AGAATTCCCTTTTCCCCCAATC 58.276 45.455 0.65 0.00 0.00 2.67
1497 7257 3.845992 CAAGAATTCCCTTTTCCCCCAAT 59.154 43.478 0.65 0.00 0.00 3.16
1498 7258 3.247162 CAAGAATTCCCTTTTCCCCCAA 58.753 45.455 0.65 0.00 0.00 4.12
1529 7292 3.260884 TCCCACGCTGATTTTAAGAGACT 59.739 43.478 0.00 0.00 0.00 3.24
1555 7318 5.106038 CCATGTTAGTAACTCTGTACGACCA 60.106 44.000 14.00 0.00 0.00 4.02
1581 7354 3.966154 AGAACTCACAGTGACTGTTACG 58.034 45.455 16.79 9.57 42.59 3.18
1582 7355 6.074544 AGTAGAACTCACAGTGACTGTTAC 57.925 41.667 16.79 14.26 42.59 2.50
1761 7534 6.097554 TCTCACATAAGATGGAGGAAGAAGAC 59.902 42.308 0.00 0.00 32.17 3.01
1907 7697 9.716507 ACGCTATGAATAAATTGTAATTGTGTC 57.283 29.630 0.00 0.00 0.00 3.67
1917 7707 9.289303 ACTTTTAAGCACGCTATGAATAAATTG 57.711 29.630 0.00 0.00 0.00 2.32
2011 7802 8.746052 TGGAACTGATACCAATCGATAATTTT 57.254 30.769 0.00 0.00 34.60 1.82
2019 7810 3.977427 TCGATGGAACTGATACCAATCG 58.023 45.455 0.00 0.00 39.69 3.34
2210 8001 1.098050 CCACAAGGTAAGCCTGATGC 58.902 55.000 0.00 0.00 46.33 3.91
2522 8314 7.350382 TCTAGAGAAGAGAATGTAGATGGTGT 58.650 38.462 0.00 0.00 0.00 4.16
2585 8377 3.471244 GACAGGTCCGCGAGATCCG 62.471 68.421 8.23 0.00 42.21 4.18
2758 8716 5.505654 CCACAAACTATTGAGTCACCACAAC 60.506 44.000 0.00 0.00 38.94 3.32
2808 8766 3.416277 CGTTGCAGCACACATGTAATAC 58.584 45.455 0.00 0.00 0.00 1.89
3048 9010 1.153469 GAAGCCAAGGAGGAGCTCG 60.153 63.158 7.83 0.00 41.22 5.03
3103 9065 5.006386 GCAGGCCAAGCATAATAGACTTAT 58.994 41.667 14.58 0.00 0.00 1.73
3104 9066 4.141505 TGCAGGCCAAGCATAATAGACTTA 60.142 41.667 17.76 0.00 37.02 2.24
3105 9067 3.217626 GCAGGCCAAGCATAATAGACTT 58.782 45.455 14.58 0.00 0.00 3.01
3112 9074 0.889994 CAAGTGCAGGCCAAGCATAA 59.110 50.000 23.30 0.68 44.79 1.90
3138 9100 0.036388 AATGTGCACGGAGTAGGGTG 60.036 55.000 13.13 0.00 41.61 4.61
3191 9159 5.939764 ACTAGCATATCCTTCACTTCACA 57.060 39.130 0.00 0.00 0.00 3.58
3192 9160 6.818644 TGAAACTAGCATATCCTTCACTTCAC 59.181 38.462 0.00 0.00 0.00 3.18
3235 9203 8.028354 CGGACCCAACATACATACGTATATTTA 58.972 37.037 7.96 0.70 36.11 1.40
3236 9204 6.869913 CGGACCCAACATACATACGTATATTT 59.130 38.462 7.96 0.00 36.11 1.40
3274 9242 0.249911 AGGACTGAACACTGGCGTTC 60.250 55.000 5.55 5.55 44.56 3.95
3275 9243 0.249911 GAGGACTGAACACTGGCGTT 60.250 55.000 0.00 0.00 0.00 4.84
3276 9244 1.367840 GAGGACTGAACACTGGCGT 59.632 57.895 0.00 0.00 0.00 5.68
3278 9246 0.946221 CACGAGGACTGAACACTGGC 60.946 60.000 0.00 0.00 0.00 4.85
3279 9247 0.319900 CCACGAGGACTGAACACTGG 60.320 60.000 0.00 0.00 36.89 4.00
3280 9248 0.319900 CCCACGAGGACTGAACACTG 60.320 60.000 0.00 0.00 38.24 3.66
3295 9273 1.329599 GGCGAAATACACGATTCCCAC 59.670 52.381 0.00 0.00 0.00 4.61
3351 9329 2.095466 CGAGGCTAGAGACCATTCGATC 60.095 54.545 0.00 0.00 29.01 3.69
3359 9337 0.599060 GGCATACGAGGCTAGAGACC 59.401 60.000 0.28 0.00 0.00 3.85
3414 9442 6.449635 AATCTCACACAGCTGTTAAAAACA 57.550 33.333 18.94 0.00 39.52 2.83
3415 9443 7.538678 CCATAATCTCACACAGCTGTTAAAAAC 59.461 37.037 18.94 0.00 0.00 2.43
3420 9448 5.419542 GACCATAATCTCACACAGCTGTTA 58.580 41.667 18.94 5.55 0.00 2.41
3421 9449 4.256920 GACCATAATCTCACACAGCTGTT 58.743 43.478 18.94 6.15 0.00 3.16
3422 9450 3.677148 CGACCATAATCTCACACAGCTGT 60.677 47.826 15.25 15.25 0.00 4.40
3423 9451 2.862536 CGACCATAATCTCACACAGCTG 59.137 50.000 13.48 13.48 0.00 4.24
3424 9452 2.739932 GCGACCATAATCTCACACAGCT 60.740 50.000 0.00 0.00 0.00 4.24
3425 9453 1.594862 GCGACCATAATCTCACACAGC 59.405 52.381 0.00 0.00 0.00 4.40
3426 9454 3.170791 AGCGACCATAATCTCACACAG 57.829 47.619 0.00 0.00 0.00 3.66
3427 9455 3.445805 TGTAGCGACCATAATCTCACACA 59.554 43.478 0.00 0.00 0.00 3.72
3432 9576 3.043586 CGTGTGTAGCGACCATAATCTC 58.956 50.000 0.00 0.00 0.00 2.75
3439 9583 0.240145 CTTCTCGTGTGTAGCGACCA 59.760 55.000 0.00 0.00 34.47 4.02
3449 9593 4.816392 TGTATACAATGCACTTCTCGTGT 58.184 39.130 2.20 0.00 45.57 4.49
3539 9767 1.079819 GCTGGCGTGCTGACTAAGA 60.080 57.895 0.00 0.00 0.00 2.10
3541 9769 3.059982 AGCTGGCGTGCTGACTAA 58.940 55.556 4.02 0.00 42.33 2.24
3552 9780 1.742761 TAAGCAGTTGATCAGCTGGC 58.257 50.000 32.49 25.33 38.86 4.85
3558 9786 3.138884 TGCCACTTAAGCAGTTGATCA 57.861 42.857 1.29 0.00 34.69 2.92
3584 9812 2.700329 TGCACTCGCACAAATGACA 58.300 47.368 0.00 0.00 45.36 3.58
3604 9832 6.245408 TGGTAGTTTTGCCTATTGATTGAGT 58.755 36.000 0.00 0.00 0.00 3.41
3702 10095 4.450976 TGACGCATTATATTTGCTCACCT 58.549 39.130 8.24 0.00 37.96 4.00
3703 10096 4.319766 CCTGACGCATTATATTTGCTCACC 60.320 45.833 8.24 0.00 37.96 4.02
3738 10133 4.433186 TTGGAATGCATTTACGAAGTGG 57.567 40.909 14.33 0.00 45.73 4.00
3782 10177 5.105269 TGCTTGTATTCTGTATTCCGGTACA 60.105 40.000 0.00 2.65 33.75 2.90
3783 10178 5.233689 GTGCTTGTATTCTGTATTCCGGTAC 59.766 44.000 0.00 0.00 0.00 3.34
3784 10179 5.105269 TGTGCTTGTATTCTGTATTCCGGTA 60.105 40.000 0.00 0.00 0.00 4.02
3785 10180 4.189231 GTGCTTGTATTCTGTATTCCGGT 58.811 43.478 0.00 0.00 0.00 5.28
3786 10181 4.188462 TGTGCTTGTATTCTGTATTCCGG 58.812 43.478 0.00 0.00 0.00 5.14
3787 10182 5.991328 ATGTGCTTGTATTCTGTATTCCG 57.009 39.130 0.00 0.00 0.00 4.30
3788 10183 8.338259 CACTAATGTGCTTGTATTCTGTATTCC 58.662 37.037 0.00 0.00 37.38 3.01
3812 10208 7.396540 AAAGAGTTAATGATCATCAACCCAC 57.603 36.000 16.69 9.69 0.00 4.61
3839 10235 2.286772 CGAAAGCGCCTTGTTGTAACTT 60.287 45.455 2.29 0.00 0.00 2.66
3852 10250 0.370273 CTGTCATGTACCGAAAGCGC 59.630 55.000 0.00 0.00 35.83 5.92
3870 10268 2.239907 GGCTTTTGGTGATAGGAGGTCT 59.760 50.000 0.00 0.00 0.00 3.85
3871 10269 2.026262 TGGCTTTTGGTGATAGGAGGTC 60.026 50.000 0.00 0.00 0.00 3.85
3872 10270 1.992557 TGGCTTTTGGTGATAGGAGGT 59.007 47.619 0.00 0.00 0.00 3.85
3873 10271 2.648059 CTGGCTTTTGGTGATAGGAGG 58.352 52.381 0.00 0.00 0.00 4.30
3929 10344 0.388659 GAGCGAGCTGGTGATCTCAT 59.611 55.000 0.84 0.00 0.00 2.90
3953 10368 5.989777 AGCGGTGTTGATACTCATTTATACC 59.010 40.000 0.00 0.00 0.00 2.73
4065 10491 1.312815 GCGCCAGATAAATGCTCCTT 58.687 50.000 0.00 0.00 0.00 3.36
4066 10492 0.181114 TGCGCCAGATAAATGCTCCT 59.819 50.000 4.18 0.00 0.00 3.69
4085 10511 4.038162 GGCTGAAGAGTTATAGATGACGGT 59.962 45.833 0.00 0.00 0.00 4.83
4236 10702 2.532250 TGCCCATCAGACTGAGTCTA 57.468 50.000 15.73 4.62 41.37 2.59
4237 10703 1.876849 ATGCCCATCAGACTGAGTCT 58.123 50.000 9.77 9.77 44.44 3.24
4238 10704 4.348863 AATATGCCCATCAGACTGAGTC 57.651 45.455 11.52 3.98 0.00 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.