Multiple sequence alignment - TraesCS1A01G170500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G170500 chr1A 100.000 4735 0 0 1 4735 304995060 304999794 0.000000e+00 8745
1 TraesCS1A01G170500 chr1A 96.866 702 22 0 1 702 253726436 253727137 0.000000e+00 1175
2 TraesCS1A01G170500 chr1A 97.333 75 2 0 4351 4425 304999335 304999409 1.380000e-25 128
3 TraesCS1A01G170500 chr1A 97.333 75 2 0 4276 4350 304999410 304999484 1.380000e-25 128
4 TraesCS1A01G170500 chr1D 96.518 3245 74 16 1016 4250 240587030 240590245 0.000000e+00 5330
5 TraesCS1A01G170500 chr1B 96.334 3246 87 10 774 3998 333634186 333630952 0.000000e+00 5306
6 TraesCS1A01G170500 chr4D 90.642 2725 227 11 1196 3919 486099601 486102298 0.000000e+00 3594
7 TraesCS1A01G170500 chr4D 89.996 2389 215 10 1543 3919 486319088 486316712 0.000000e+00 3066
8 TraesCS1A01G170500 chr4D 87.584 298 23 2 1268 1551 486342188 486341891 2.730000e-87 333
9 TraesCS1A01G170500 chr4D 89.571 163 12 4 1016 1173 486099452 486099614 8.030000e-48 202
10 TraesCS1A01G170500 chr4D 90.511 137 13 0 1029 1165 486342382 486342246 1.050000e-41 182
11 TraesCS1A01G170500 chr5A 91.220 2050 178 2 1871 3919 666704985 666707033 0.000000e+00 2787
12 TraesCS1A01G170500 chr5A 96.987 697 21 0 11 707 321330467 321329771 0.000000e+00 1171
13 TraesCS1A01G170500 chr5A 96.862 701 20 2 1 701 521759351 521760049 0.000000e+00 1171
14 TraesCS1A01G170500 chr5A 96.970 693 21 0 1 693 458974176 458973484 0.000000e+00 1164
15 TraesCS1A01G170500 chr5A 96.719 701 19 2 1 697 620176997 620176297 0.000000e+00 1164
16 TraesCS1A01G170500 chr5A 85.106 658 57 13 1062 1719 666703377 666703993 6.680000e-178 634
17 TraesCS1A01G170500 chr5B 97.414 696 18 0 1 696 631810523 631811218 0.000000e+00 1186
18 TraesCS1A01G170500 chr2A 96.996 699 20 1 1 699 322541734 322541037 0.000000e+00 1173
19 TraesCS1A01G170500 chr3B 96.724 702 21 2 1 701 759809358 759808658 0.000000e+00 1168
20 TraesCS1A01G170500 chr3D 94.127 664 33 3 1 664 577398029 577398686 0.000000e+00 1005


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G170500 chr1A 304995060 304999794 4734 False 3000.333333 8745 98.2220 1 4735 3 chr1A.!!$F2 4734
1 TraesCS1A01G170500 chr1A 253726436 253727137 701 False 1175.000000 1175 96.8660 1 702 1 chr1A.!!$F1 701
2 TraesCS1A01G170500 chr1D 240587030 240590245 3215 False 5330.000000 5330 96.5180 1016 4250 1 chr1D.!!$F1 3234
3 TraesCS1A01G170500 chr1B 333630952 333634186 3234 True 5306.000000 5306 96.3340 774 3998 1 chr1B.!!$R1 3224
4 TraesCS1A01G170500 chr4D 486316712 486319088 2376 True 3066.000000 3066 89.9960 1543 3919 1 chr4D.!!$R1 2376
5 TraesCS1A01G170500 chr4D 486099452 486102298 2846 False 1898.000000 3594 90.1065 1016 3919 2 chr4D.!!$F1 2903
6 TraesCS1A01G170500 chr5A 666703377 666707033 3656 False 1710.500000 2787 88.1630 1062 3919 2 chr5A.!!$F2 2857
7 TraesCS1A01G170500 chr5A 321329771 321330467 696 True 1171.000000 1171 96.9870 11 707 1 chr5A.!!$R1 696
8 TraesCS1A01G170500 chr5A 521759351 521760049 698 False 1171.000000 1171 96.8620 1 701 1 chr5A.!!$F1 700
9 TraesCS1A01G170500 chr5A 458973484 458974176 692 True 1164.000000 1164 96.9700 1 693 1 chr5A.!!$R2 692
10 TraesCS1A01G170500 chr5A 620176297 620176997 700 True 1164.000000 1164 96.7190 1 697 1 chr5A.!!$R3 696
11 TraesCS1A01G170500 chr5B 631810523 631811218 695 False 1186.000000 1186 97.4140 1 696 1 chr5B.!!$F1 695
12 TraesCS1A01G170500 chr2A 322541037 322541734 697 True 1173.000000 1173 96.9960 1 699 1 chr2A.!!$R1 698
13 TraesCS1A01G170500 chr3B 759808658 759809358 700 True 1168.000000 1168 96.7240 1 701 1 chr3B.!!$R1 700
14 TraesCS1A01G170500 chr3D 577398029 577398686 657 False 1005.000000 1005 94.1270 1 664 1 chr3D.!!$F1 663

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
755 761 0.322816 CCCAATCGCATATCAGGGGG 60.323 60.000 0.00 0.00 32.59 5.40 F
854 860 0.326238 CTACACCAAGAGGGGCCCTA 60.326 60.000 28.92 6.08 44.59 3.53 F
855 861 0.326238 TACACCAAGAGGGGCCCTAG 60.326 60.000 28.92 18.44 44.59 3.02 F
1792 1814 0.881118 TTCGCTGAAATTGGACAGGC 59.119 50.000 0.00 0.00 35.05 4.85 F
2055 2952 1.026718 GCCCCAAGAACGAGGATGTG 61.027 60.000 0.00 0.00 0.00 3.21 F
2100 2997 1.674057 CCCAGACGAGTCAAAGGCT 59.326 57.895 5.99 0.00 0.00 4.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1902 2799 0.108709 CAGACCTGAGCAGCAGTCTC 60.109 60.000 0.0 0.0 43.33 3.36 R
2100 2997 0.774276 TCACACCCCTGGCAATTACA 59.226 50.000 0.0 0.0 0.00 2.41 R
2171 3068 4.154918 CCCTGCTCTTGTTCAAATCACTAC 59.845 45.833 0.0 0.0 0.00 2.73 R
2862 3765 0.171903 CCAGCCATTTCTCCTTTGCG 59.828 55.000 0.0 0.0 0.00 4.85 R
3487 4394 0.382158 TTTGATTTGCGTTGCGGACA 59.618 45.000 0.0 0.0 0.00 4.02 R
3819 4726 0.535780 CTGCACCAAGAGCCAGAACA 60.536 55.000 0.0 0.0 0.00 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
327 328 6.295575 GCTCATACTGGCTCTATATTGGACTT 60.296 42.308 0.00 0.00 0.00 3.01
397 398 2.769663 ACTTATAATGGCGGTGTCCTGA 59.230 45.455 0.00 0.00 0.00 3.86
429 430 4.622701 AAGAAAGAAACAGCCGCATATC 57.377 40.909 0.00 0.00 0.00 1.63
453 454 1.119684 AACAAGGCAAACCACTTCCC 58.880 50.000 0.00 0.00 39.06 3.97
635 641 5.070685 GTCCTGAACCTTGACCTGTATTTT 58.929 41.667 0.00 0.00 0.00 1.82
724 730 7.948278 AAGAAAGATAGGATCGGAAAATACG 57.052 36.000 0.00 0.00 0.00 3.06
725 731 7.052142 AGAAAGATAGGATCGGAAAATACGT 57.948 36.000 0.00 0.00 0.00 3.57
726 732 6.924060 AGAAAGATAGGATCGGAAAATACGTG 59.076 38.462 0.00 0.00 0.00 4.49
727 733 5.786264 AGATAGGATCGGAAAATACGTGT 57.214 39.130 0.00 0.00 0.00 4.49
728 734 6.158023 AGATAGGATCGGAAAATACGTGTT 57.842 37.500 0.00 0.00 0.00 3.32
729 735 6.214399 AGATAGGATCGGAAAATACGTGTTC 58.786 40.000 0.00 0.00 0.00 3.18
730 736 3.528532 AGGATCGGAAAATACGTGTTCC 58.471 45.455 14.33 14.33 40.03 3.62
731 737 3.197116 AGGATCGGAAAATACGTGTTCCT 59.803 43.478 19.26 9.06 41.07 3.36
732 738 3.554731 GGATCGGAAAATACGTGTTCCTC 59.445 47.826 19.26 13.27 41.07 3.71
733 739 2.598589 TCGGAAAATACGTGTTCCTCG 58.401 47.619 19.26 13.47 41.07 4.63
734 740 2.228582 TCGGAAAATACGTGTTCCTCGA 59.771 45.455 19.26 15.02 41.07 4.04
735 741 3.119388 TCGGAAAATACGTGTTCCTCGAT 60.119 43.478 19.26 0.00 41.07 3.59
736 742 3.242248 CGGAAAATACGTGTTCCTCGATC 59.758 47.826 19.26 4.90 41.07 3.69
737 743 3.554731 GGAAAATACGTGTTCCTCGATCC 59.445 47.826 16.17 7.03 40.24 3.36
738 744 2.884894 AATACGTGTTCCTCGATCCC 57.115 50.000 0.00 0.00 0.00 3.85
739 745 1.771565 ATACGTGTTCCTCGATCCCA 58.228 50.000 0.00 0.00 0.00 4.37
740 746 1.548081 TACGTGTTCCTCGATCCCAA 58.452 50.000 0.00 0.00 0.00 4.12
741 747 0.902531 ACGTGTTCCTCGATCCCAAT 59.097 50.000 0.00 0.00 0.00 3.16
742 748 1.134788 ACGTGTTCCTCGATCCCAATC 60.135 52.381 0.00 0.00 0.00 2.67
753 759 2.636830 GATCCCAATCGCATATCAGGG 58.363 52.381 0.00 0.00 37.65 4.45
754 760 0.692476 TCCCAATCGCATATCAGGGG 59.308 55.000 0.00 0.00 36.92 4.79
755 761 0.322816 CCCAATCGCATATCAGGGGG 60.323 60.000 0.00 0.00 32.59 5.40
756 762 0.401738 CCAATCGCATATCAGGGGGT 59.598 55.000 0.00 0.00 0.00 4.95
757 763 1.527034 CAATCGCATATCAGGGGGTG 58.473 55.000 0.00 0.00 0.00 4.61
758 764 1.140312 AATCGCATATCAGGGGGTGT 58.860 50.000 0.00 0.00 0.00 4.16
759 765 0.397941 ATCGCATATCAGGGGGTGTG 59.602 55.000 0.00 0.00 0.00 3.82
760 766 1.893808 CGCATATCAGGGGGTGTGC 60.894 63.158 0.00 0.00 0.00 4.57
761 767 1.893808 GCATATCAGGGGGTGTGCG 60.894 63.158 0.00 0.00 0.00 5.34
762 768 1.526887 CATATCAGGGGGTGTGCGT 59.473 57.895 0.00 0.00 0.00 5.24
763 769 0.815213 CATATCAGGGGGTGTGCGTG 60.815 60.000 0.00 0.00 0.00 5.34
764 770 2.608970 ATATCAGGGGGTGTGCGTGC 62.609 60.000 0.00 0.00 0.00 5.34
766 772 4.954970 CAGGGGGTGTGCGTGCTT 62.955 66.667 0.00 0.00 0.00 3.91
767 773 4.954970 AGGGGGTGTGCGTGCTTG 62.955 66.667 0.00 0.00 0.00 4.01
771 777 3.595758 GGTGTGCGTGCTTGCCTT 61.596 61.111 0.00 0.00 0.00 4.35
772 778 2.050985 GTGTGCGTGCTTGCCTTC 60.051 61.111 0.00 0.00 0.00 3.46
784 790 0.446222 TTGCCTTCGTAAAGATGCGC 59.554 50.000 0.00 0.00 34.14 6.09
836 842 3.007635 GCACCGCCTCTAAAATTGTACT 58.992 45.455 0.00 0.00 0.00 2.73
837 843 4.186159 GCACCGCCTCTAAAATTGTACTA 58.814 43.478 0.00 0.00 0.00 1.82
840 846 5.063060 CACCGCCTCTAAAATTGTACTACAC 59.937 44.000 0.00 0.00 0.00 2.90
841 847 4.569564 CCGCCTCTAAAATTGTACTACACC 59.430 45.833 0.00 0.00 0.00 4.16
843 849 5.640357 CGCCTCTAAAATTGTACTACACCAA 59.360 40.000 0.00 0.00 0.00 3.67
845 851 6.877322 GCCTCTAAAATTGTACTACACCAAGA 59.123 38.462 0.00 0.00 0.00 3.02
846 852 7.064728 GCCTCTAAAATTGTACTACACCAAGAG 59.935 40.741 0.00 0.00 0.00 2.85
847 853 7.549488 CCTCTAAAATTGTACTACACCAAGAGG 59.451 40.741 13.04 13.04 42.21 3.69
848 854 7.391620 TCTAAAATTGTACTACACCAAGAGGG 58.608 38.462 0.00 0.00 44.81 4.30
849 855 4.569719 AATTGTACTACACCAAGAGGGG 57.430 45.455 0.00 0.00 46.87 4.79
850 856 1.272807 TGTACTACACCAAGAGGGGC 58.727 55.000 0.00 0.00 44.59 5.80
851 857 0.540454 GTACTACACCAAGAGGGGCC 59.460 60.000 0.00 0.00 44.59 5.80
852 858 0.619543 TACTACACCAAGAGGGGCCC 60.620 60.000 17.12 17.12 44.59 5.80
853 859 1.616628 CTACACCAAGAGGGGCCCT 60.617 63.158 29.30 29.30 44.59 5.19
854 860 0.326238 CTACACCAAGAGGGGCCCTA 60.326 60.000 28.92 6.08 44.59 3.53
855 861 0.326238 TACACCAAGAGGGGCCCTAG 60.326 60.000 28.92 18.44 44.59 3.02
856 862 1.306997 CACCAAGAGGGGCCCTAGA 60.307 63.158 28.92 0.00 42.91 2.43
867 873 1.524482 GCCCTAGACCTTGAGCTGG 59.476 63.158 0.00 0.00 0.00 4.85
868 874 1.268283 GCCCTAGACCTTGAGCTGGT 61.268 60.000 0.00 0.00 41.07 4.00
1332 1352 1.153823 CGAGTTCGAGGGCAACGAT 60.154 57.895 6.14 0.00 43.02 3.73
1527 1547 1.485895 GATCTCAAGAGGAAGCTGGCT 59.514 52.381 0.00 0.00 0.00 4.75
1536 1556 1.028868 GGAAGCTGGCTGATGTGTCC 61.029 60.000 0.00 0.00 0.00 4.02
1572 1592 3.979501 AGCATACCTGAAATTGGGGAT 57.020 42.857 0.00 0.00 0.00 3.85
1719 1741 2.524394 ACTGAGACACCGTGGGCT 60.524 61.111 3.03 0.00 0.00 5.19
1782 1804 1.871039 GGTACTGTGCTTTCGCTGAAA 59.129 47.619 0.00 4.19 36.97 2.69
1792 1814 0.881118 TTCGCTGAAATTGGACAGGC 59.119 50.000 0.00 0.00 35.05 4.85
1902 2799 4.942852 AGATCTCTGACATTAAGAAGGCG 58.057 43.478 0.00 0.00 0.00 5.52
1968 2865 1.980772 AGGTTGGATTGCTGCTGCC 60.981 57.895 13.47 0.00 38.71 4.85
2055 2952 1.026718 GCCCCAAGAACGAGGATGTG 61.027 60.000 0.00 0.00 0.00 3.21
2100 2997 1.674057 CCCAGACGAGTCAAAGGCT 59.326 57.895 5.99 0.00 0.00 4.58
2171 3068 1.736681 GCAGGCTGCAAAACTAGAGAG 59.263 52.381 33.33 0.00 44.26 3.20
2556 3459 1.716172 GCTAAAGGAAGCCGAAGCG 59.284 57.895 0.00 0.00 46.67 4.68
2862 3765 3.287222 TGAAGTGTTATGGCTTATGGGC 58.713 45.455 0.00 0.00 41.27 5.36
3325 4232 2.034879 CGCGCTTTCCTCACCATGT 61.035 57.895 5.56 0.00 0.00 3.21
3487 4394 2.860009 CAGCTATTGAGATGGTGCCAT 58.140 47.619 2.95 2.95 35.34 4.40
3492 4399 0.392863 TTGAGATGGTGCCATGTCCG 60.393 55.000 20.95 0.00 43.46 4.79
3708 4615 0.889186 ATGCGGACACACAAAGGGAC 60.889 55.000 0.00 0.00 0.00 4.46
3792 4699 3.141398 GGCTGTTGAGAACTCACATCAA 58.859 45.455 3.88 0.00 39.66 2.57
3819 4726 2.309755 TGATGCCATCCTGAGGAAAGTT 59.690 45.455 4.76 0.00 34.34 2.66
3936 4851 4.492494 TTGCTATCCTCATGCTCTGAAA 57.508 40.909 0.00 0.00 32.14 2.69
3964 4879 5.536260 TGATGCATCATGTAGCTACTTCTC 58.464 41.667 25.42 9.32 0.00 2.87
3975 4890 4.607293 AGCTACTTCTCATTGTGTGTCA 57.393 40.909 0.00 0.00 0.00 3.58
4019 4934 6.787085 AAGAGTAGCGACATATATTTTGGC 57.213 37.500 0.00 0.00 0.00 4.52
4020 4935 5.853936 AGAGTAGCGACATATATTTTGGCA 58.146 37.500 0.00 0.00 0.00 4.92
4021 4936 5.696724 AGAGTAGCGACATATATTTTGGCAC 59.303 40.000 0.00 0.00 0.00 5.01
4022 4937 5.364778 AGTAGCGACATATATTTTGGCACA 58.635 37.500 0.00 0.00 0.00 4.57
4023 4938 4.818534 AGCGACATATATTTTGGCACAG 57.181 40.909 0.00 0.00 42.39 3.66
4024 4939 4.450976 AGCGACATATATTTTGGCACAGA 58.549 39.130 0.00 0.00 42.39 3.41
4025 4940 4.512944 AGCGACATATATTTTGGCACAGAG 59.487 41.667 0.00 0.00 42.39 3.35
4026 4941 4.319766 GCGACATATATTTTGGCACAGAGG 60.320 45.833 0.00 0.00 42.39 3.69
4027 4942 4.214119 CGACATATATTTTGGCACAGAGGG 59.786 45.833 0.00 0.00 42.39 4.30
4028 4943 5.376625 GACATATATTTTGGCACAGAGGGA 58.623 41.667 0.00 0.00 42.39 4.20
4040 4955 3.954904 GCACAGAGGGAGTACTTGAGATA 59.045 47.826 0.00 0.00 0.00 1.98
4106 5021 8.770010 ATGCATACCTCTTAACTAGAAGTAGT 57.230 34.615 0.00 0.00 41.61 2.73
4107 5022 8.223177 TGCATACCTCTTAACTAGAAGTAGTC 57.777 38.462 0.00 0.00 38.66 2.59
4136 5051 4.416620 CTTGTTGTGCCGTTTTCTTTGTA 58.583 39.130 0.00 0.00 0.00 2.41
4138 5053 3.440872 TGTTGTGCCGTTTTCTTTGTAGT 59.559 39.130 0.00 0.00 0.00 2.73
4139 5054 4.634883 TGTTGTGCCGTTTTCTTTGTAGTA 59.365 37.500 0.00 0.00 0.00 1.82
4142 5057 4.453136 TGTGCCGTTTTCTTTGTAGTATCC 59.547 41.667 0.00 0.00 0.00 2.59
4169 5084 1.675641 GCTGTCCGCTTGGTGGATT 60.676 57.895 3.09 0.00 44.40 3.01
4202 5119 4.517075 TCTGTTGTTTATTTCATGCGTGGA 59.483 37.500 5.98 0.00 0.00 4.02
4227 5144 5.552870 ACTGCTGTATTACCCCATAAGAG 57.447 43.478 0.00 0.00 0.00 2.85
4233 5150 6.429521 TGTATTACCCCATAAGAGGTTAGC 57.570 41.667 0.00 0.00 37.59 3.09
4234 5151 5.906495 TGTATTACCCCATAAGAGGTTAGCA 59.094 40.000 0.00 0.00 37.59 3.49
4235 5152 4.765813 TTACCCCATAAGAGGTTAGCAC 57.234 45.455 0.00 0.00 37.59 4.40
4245 5162 1.871039 GAGGTTAGCACGCTTTGTTGA 59.129 47.619 0.00 0.00 0.00 3.18
4246 5163 1.602377 AGGTTAGCACGCTTTGTTGAC 59.398 47.619 0.00 0.00 0.00 3.18
4247 5164 1.332375 GGTTAGCACGCTTTGTTGACA 59.668 47.619 0.00 0.00 27.64 3.58
4248 5165 2.602217 GGTTAGCACGCTTTGTTGACAG 60.602 50.000 0.00 0.00 27.64 3.51
4249 5166 1.948104 TAGCACGCTTTGTTGACAGT 58.052 45.000 0.00 0.00 0.00 3.55
4250 5167 0.378257 AGCACGCTTTGTTGACAGTG 59.622 50.000 0.00 0.00 0.00 3.66
4251 5168 0.376852 GCACGCTTTGTTGACAGTGA 59.623 50.000 0.00 0.00 0.00 3.41
4252 5169 1.202132 GCACGCTTTGTTGACAGTGAA 60.202 47.619 0.00 0.00 0.00 3.18
4253 5170 2.440501 CACGCTTTGTTGACAGTGAAC 58.559 47.619 0.00 0.00 0.00 3.18
4254 5171 1.400494 ACGCTTTGTTGACAGTGAACC 59.600 47.619 0.00 0.00 0.00 3.62
4255 5172 1.400142 CGCTTTGTTGACAGTGAACCA 59.600 47.619 0.00 0.00 0.00 3.67
4256 5173 2.791158 CGCTTTGTTGACAGTGAACCAC 60.791 50.000 0.00 0.00 34.10 4.16
4257 5174 2.479560 GCTTTGTTGACAGTGAACCACC 60.480 50.000 0.00 0.00 34.49 4.61
4258 5175 1.757682 TTGTTGACAGTGAACCACCC 58.242 50.000 0.00 0.00 34.49 4.61
4259 5176 0.462937 TGTTGACAGTGAACCACCCG 60.463 55.000 0.00 0.00 34.49 5.28
4260 5177 1.147376 TTGACAGTGAACCACCCGG 59.853 57.895 0.00 0.00 34.49 5.73
4270 5187 3.873781 ACCACCCGGTGATTACATG 57.126 52.632 19.81 2.67 46.79 3.21
4271 5188 0.254747 ACCACCCGGTGATTACATGG 59.745 55.000 19.81 1.86 46.79 3.66
4272 5189 0.254747 CCACCCGGTGATTACATGGT 59.745 55.000 19.81 0.00 35.23 3.55
4273 5190 1.340600 CCACCCGGTGATTACATGGTT 60.341 52.381 19.81 0.00 35.23 3.67
4274 5191 2.092861 CCACCCGGTGATTACATGGTTA 60.093 50.000 19.81 0.00 35.23 2.85
4275 5192 3.434453 CCACCCGGTGATTACATGGTTAT 60.434 47.826 19.81 0.00 35.23 1.89
4276 5193 4.204012 CACCCGGTGATTACATGGTTATT 58.796 43.478 12.68 0.00 35.23 1.40
4277 5194 4.274950 CACCCGGTGATTACATGGTTATTC 59.725 45.833 12.68 0.00 35.23 1.75
4278 5195 4.165372 ACCCGGTGATTACATGGTTATTCT 59.835 41.667 0.00 0.00 0.00 2.40
4279 5196 5.130350 CCCGGTGATTACATGGTTATTCTT 58.870 41.667 0.00 0.00 0.00 2.52
4280 5197 5.008613 CCCGGTGATTACATGGTTATTCTTG 59.991 44.000 0.00 0.00 0.00 3.02
4281 5198 5.505654 CCGGTGATTACATGGTTATTCTTGC 60.506 44.000 0.00 0.00 0.00 4.01
4282 5199 5.505654 CGGTGATTACATGGTTATTCTTGCC 60.506 44.000 0.00 0.00 0.00 4.52
4283 5200 5.594317 GGTGATTACATGGTTATTCTTGCCT 59.406 40.000 0.00 0.00 0.00 4.75
4284 5201 6.238759 GGTGATTACATGGTTATTCTTGCCTC 60.239 42.308 0.00 0.00 0.00 4.70
4285 5202 5.527214 TGATTACATGGTTATTCTTGCCTCG 59.473 40.000 0.00 0.00 0.00 4.63
4286 5203 2.017049 ACATGGTTATTCTTGCCTCGC 58.983 47.619 0.00 0.00 0.00 5.03
4287 5204 1.334869 CATGGTTATTCTTGCCTCGCC 59.665 52.381 0.00 0.00 0.00 5.54
4288 5205 0.618458 TGGTTATTCTTGCCTCGCCT 59.382 50.000 0.00 0.00 0.00 5.52
4289 5206 1.004277 TGGTTATTCTTGCCTCGCCTT 59.996 47.619 0.00 0.00 0.00 4.35
4290 5207 2.237643 TGGTTATTCTTGCCTCGCCTTA 59.762 45.455 0.00 0.00 0.00 2.69
4291 5208 2.872858 GGTTATTCTTGCCTCGCCTTAG 59.127 50.000 0.00 0.00 0.00 2.18
4292 5209 3.532542 GTTATTCTTGCCTCGCCTTAGT 58.467 45.455 0.00 0.00 0.00 2.24
4293 5210 2.789409 ATTCTTGCCTCGCCTTAGTT 57.211 45.000 0.00 0.00 0.00 2.24
4294 5211 2.561478 TTCTTGCCTCGCCTTAGTTT 57.439 45.000 0.00 0.00 0.00 2.66
4295 5212 1.808411 TCTTGCCTCGCCTTAGTTTG 58.192 50.000 0.00 0.00 0.00 2.93
4296 5213 1.071699 TCTTGCCTCGCCTTAGTTTGT 59.928 47.619 0.00 0.00 0.00 2.83
4297 5214 1.197721 CTTGCCTCGCCTTAGTTTGTG 59.802 52.381 0.00 0.00 0.00 3.33
4298 5215 0.605319 TGCCTCGCCTTAGTTTGTGG 60.605 55.000 0.00 0.00 0.00 4.17
4299 5216 0.605589 GCCTCGCCTTAGTTTGTGGT 60.606 55.000 0.00 0.00 0.00 4.16
4300 5217 1.892209 CCTCGCCTTAGTTTGTGGTT 58.108 50.000 0.00 0.00 0.00 3.67
4301 5218 2.227194 CCTCGCCTTAGTTTGTGGTTT 58.773 47.619 0.00 0.00 0.00 3.27
4302 5219 2.225727 CCTCGCCTTAGTTTGTGGTTTC 59.774 50.000 0.00 0.00 0.00 2.78
4303 5220 2.223745 TCGCCTTAGTTTGTGGTTTCC 58.776 47.619 0.00 0.00 0.00 3.13
4304 5221 2.158726 TCGCCTTAGTTTGTGGTTTCCT 60.159 45.455 0.00 0.00 0.00 3.36
4305 5222 3.071312 TCGCCTTAGTTTGTGGTTTCCTA 59.929 43.478 0.00 0.00 0.00 2.94
4306 5223 3.816523 CGCCTTAGTTTGTGGTTTCCTAA 59.183 43.478 0.00 0.00 0.00 2.69
4307 5224 4.083484 CGCCTTAGTTTGTGGTTTCCTAAG 60.083 45.833 0.00 0.00 36.14 2.18
4308 5225 5.959618 CCTTAGTTTGTGGTTTCCTAAGG 57.040 43.478 8.82 8.82 44.80 2.69
4309 5226 5.382616 CCTTAGTTTGTGGTTTCCTAAGGT 58.617 41.667 13.22 0.00 44.96 3.50
4310 5227 6.536447 CCTTAGTTTGTGGTTTCCTAAGGTA 58.464 40.000 13.22 0.00 44.96 3.08
4311 5228 6.653740 CCTTAGTTTGTGGTTTCCTAAGGTAG 59.346 42.308 13.22 0.00 44.96 3.18
4312 5229 5.641789 AGTTTGTGGTTTCCTAAGGTAGT 57.358 39.130 0.00 0.00 0.00 2.73
4313 5230 6.752285 AGTTTGTGGTTTCCTAAGGTAGTA 57.248 37.500 0.00 0.00 0.00 1.82
4314 5231 7.325725 AGTTTGTGGTTTCCTAAGGTAGTAT 57.674 36.000 0.00 0.00 0.00 2.12
4315 5232 7.166167 AGTTTGTGGTTTCCTAAGGTAGTATG 58.834 38.462 0.00 0.00 0.00 2.39
4316 5233 6.691255 TTGTGGTTTCCTAAGGTAGTATGT 57.309 37.500 0.00 0.00 0.00 2.29
4317 5234 7.795534 TTGTGGTTTCCTAAGGTAGTATGTA 57.204 36.000 0.00 0.00 0.00 2.29
4318 5235 7.414222 TGTGGTTTCCTAAGGTAGTATGTAG 57.586 40.000 0.00 0.00 0.00 2.74
4319 5236 7.184161 TGTGGTTTCCTAAGGTAGTATGTAGA 58.816 38.462 0.00 0.00 0.00 2.59
4320 5237 7.842743 TGTGGTTTCCTAAGGTAGTATGTAGAT 59.157 37.037 0.00 0.00 0.00 1.98
4321 5238 8.358895 GTGGTTTCCTAAGGTAGTATGTAGATC 58.641 40.741 0.00 0.00 0.00 2.75
4322 5239 8.063153 TGGTTTCCTAAGGTAGTATGTAGATCA 58.937 37.037 0.00 0.00 0.00 2.92
4323 5240 8.921205 GGTTTCCTAAGGTAGTATGTAGATCAA 58.079 37.037 0.00 0.00 0.00 2.57
4326 5243 8.651589 TCCTAAGGTAGTATGTAGATCAATGG 57.348 38.462 0.00 0.00 0.00 3.16
4327 5244 8.453681 TCCTAAGGTAGTATGTAGATCAATGGA 58.546 37.037 0.00 0.00 0.00 3.41
4328 5245 9.261035 CCTAAGGTAGTATGTAGATCAATGGAT 57.739 37.037 0.00 0.00 36.13 3.41
4330 5247 8.727100 AAGGTAGTATGTAGATCAATGGATGA 57.273 34.615 0.00 0.00 43.67 2.92
4331 5248 8.727100 AGGTAGTATGTAGATCAATGGATGAA 57.273 34.615 0.00 0.00 42.54 2.57
4332 5249 9.159254 AGGTAGTATGTAGATCAATGGATGAAA 57.841 33.333 0.00 0.00 42.54 2.69
4333 5250 9.950496 GGTAGTATGTAGATCAATGGATGAAAT 57.050 33.333 0.00 0.00 42.54 2.17
4345 5262 9.645128 ATCAATGGATGAAATAACTAATGTCCA 57.355 29.630 0.00 0.00 42.54 4.02
4346 5263 9.645128 TCAATGGATGAAATAACTAATGTCCAT 57.355 29.630 0.00 0.00 44.66 3.41
4357 5274 8.854614 ATAACTAATGTCCATATCTTCTTGCC 57.145 34.615 0.00 0.00 0.00 4.52
4358 5275 6.506538 ACTAATGTCCATATCTTCTTGCCT 57.493 37.500 0.00 0.00 0.00 4.75
4359 5276 6.529220 ACTAATGTCCATATCTTCTTGCCTC 58.471 40.000 0.00 0.00 0.00 4.70
4360 5277 3.459232 TGTCCATATCTTCTTGCCTCG 57.541 47.619 0.00 0.00 0.00 4.63
4361 5278 2.139118 GTCCATATCTTCTTGCCTCGC 58.861 52.381 0.00 0.00 0.00 5.03
4362 5279 1.070758 TCCATATCTTCTTGCCTCGCC 59.929 52.381 0.00 0.00 0.00 5.54
4363 5280 1.071385 CCATATCTTCTTGCCTCGCCT 59.929 52.381 0.00 0.00 0.00 5.52
4364 5281 2.486191 CCATATCTTCTTGCCTCGCCTT 60.486 50.000 0.00 0.00 0.00 4.35
4365 5282 3.244215 CCATATCTTCTTGCCTCGCCTTA 60.244 47.826 0.00 0.00 0.00 2.69
4366 5283 2.611225 ATCTTCTTGCCTCGCCTTAG 57.389 50.000 0.00 0.00 0.00 2.18
4367 5284 1.267121 TCTTCTTGCCTCGCCTTAGT 58.733 50.000 0.00 0.00 0.00 2.24
4368 5285 1.623811 TCTTCTTGCCTCGCCTTAGTT 59.376 47.619 0.00 0.00 0.00 2.24
4369 5286 2.829720 TCTTCTTGCCTCGCCTTAGTTA 59.170 45.455 0.00 0.00 0.00 2.24
4370 5287 2.961526 TCTTGCCTCGCCTTAGTTAG 57.038 50.000 0.00 0.00 0.00 2.34
4371 5288 2.176889 TCTTGCCTCGCCTTAGTTAGT 58.823 47.619 0.00 0.00 0.00 2.24
4372 5289 2.094182 TCTTGCCTCGCCTTAGTTAGTG 60.094 50.000 0.00 0.00 0.00 2.74
4373 5290 0.535335 TGCCTCGCCTTAGTTAGTGG 59.465 55.000 0.00 0.00 0.00 4.00
4374 5291 0.535797 GCCTCGCCTTAGTTAGTGGT 59.464 55.000 0.00 0.00 0.00 4.16
4375 5292 1.066358 GCCTCGCCTTAGTTAGTGGTT 60.066 52.381 0.00 0.00 0.00 3.67
4376 5293 2.614734 GCCTCGCCTTAGTTAGTGGTTT 60.615 50.000 0.00 0.00 0.00 3.27
4377 5294 3.259902 CCTCGCCTTAGTTAGTGGTTTC 58.740 50.000 0.00 0.00 0.00 2.78
4378 5295 3.259902 CTCGCCTTAGTTAGTGGTTTCC 58.740 50.000 0.00 0.00 0.00 3.13
4379 5296 2.901839 TCGCCTTAGTTAGTGGTTTCCT 59.098 45.455 0.00 0.00 0.00 3.36
4380 5297 4.088634 TCGCCTTAGTTAGTGGTTTCCTA 58.911 43.478 0.00 0.00 0.00 2.94
4381 5298 4.527816 TCGCCTTAGTTAGTGGTTTCCTAA 59.472 41.667 0.00 0.00 0.00 2.69
4382 5299 4.868734 CGCCTTAGTTAGTGGTTTCCTAAG 59.131 45.833 0.00 0.00 36.14 2.18
4384 5301 6.370186 CCTTAGTTAGTGGTTTCCTAAGGT 57.630 41.667 13.22 0.00 44.96 3.50
4385 5302 7.486407 CCTTAGTTAGTGGTTTCCTAAGGTA 57.514 40.000 13.22 0.00 44.96 3.08
4386 5303 7.554211 CCTTAGTTAGTGGTTTCCTAAGGTAG 58.446 42.308 13.22 0.00 44.96 3.18
4387 5304 7.179872 CCTTAGTTAGTGGTTTCCTAAGGTAGT 59.820 40.741 13.22 0.00 44.96 2.73
4388 5305 9.247861 CTTAGTTAGTGGTTTCCTAAGGTAGTA 57.752 37.037 0.00 0.00 33.91 1.82
4389 5306 9.774071 TTAGTTAGTGGTTTCCTAAGGTAGTAT 57.226 33.333 0.00 0.00 0.00 2.12
4391 5308 9.948747 AGTTAGTGGTTTCCTAAGGTAGTATAT 57.051 33.333 0.00 0.00 0.00 0.86
4420 5337 9.645128 ATCAATGGATGAAATAACTAATGTCCA 57.355 29.630 0.00 0.00 42.54 4.02
4421 5338 9.645128 TCAATGGATGAAATAACTAATGTCCAT 57.355 29.630 0.00 0.00 44.66 3.41
4453 5370 9.834628 TTCATAAGGAAACACGACAAATATTTC 57.165 29.630 0.00 0.00 30.98 2.17
4454 5371 9.004717 TCATAAGGAAACACGACAAATATTTCA 57.995 29.630 0.00 0.00 32.13 2.69
4455 5372 9.787532 CATAAGGAAACACGACAAATATTTCAT 57.212 29.630 0.00 0.00 32.13 2.57
4457 5374 8.742554 AAGGAAACACGACAAATATTTCATTC 57.257 30.769 0.00 0.00 29.98 2.67
4458 5375 7.021196 AGGAAACACGACAAATATTTCATTCG 58.979 34.615 16.39 16.39 32.13 3.34
4459 5376 7.018826 GGAAACACGACAAATATTTCATTCGA 58.981 34.615 21.56 0.00 32.13 3.71
4460 5377 7.007099 GGAAACACGACAAATATTTCATTCGAC 59.993 37.037 21.56 11.53 32.13 4.20
4461 5378 6.474819 ACACGACAAATATTTCATTCGACA 57.525 33.333 21.56 0.00 0.00 4.35
4462 5379 6.534059 ACACGACAAATATTTCATTCGACAG 58.466 36.000 21.56 15.30 0.00 3.51
4463 5380 6.147164 ACACGACAAATATTTCATTCGACAGT 59.853 34.615 21.56 15.71 0.00 3.55
4464 5381 7.329962 ACACGACAAATATTTCATTCGACAGTA 59.670 33.333 21.56 0.00 0.00 2.74
4465 5382 7.630987 CACGACAAATATTTCATTCGACAGTAC 59.369 37.037 21.56 0.00 0.00 2.73
4466 5383 7.329962 ACGACAAATATTTCATTCGACAGTACA 59.670 33.333 21.56 0.00 0.00 2.90
4467 5384 8.166066 CGACAAATATTTCATTCGACAGTACAA 58.834 33.333 14.17 0.00 0.00 2.41
4468 5385 9.820229 GACAAATATTTCATTCGACAGTACAAA 57.180 29.630 0.00 0.00 0.00 2.83
4475 5392 8.555166 TTTCATTCGACAGTACAAAACAAATC 57.445 30.769 0.00 0.00 0.00 2.17
4476 5393 7.252965 TCATTCGACAGTACAAAACAAATCA 57.747 32.000 0.00 0.00 0.00 2.57
4477 5394 7.870826 TCATTCGACAGTACAAAACAAATCAT 58.129 30.769 0.00 0.00 0.00 2.45
4478 5395 8.015087 TCATTCGACAGTACAAAACAAATCATC 58.985 33.333 0.00 0.00 0.00 2.92
4479 5396 6.236017 TCGACAGTACAAAACAAATCATCC 57.764 37.500 0.00 0.00 0.00 3.51
4480 5397 5.760743 TCGACAGTACAAAACAAATCATCCA 59.239 36.000 0.00 0.00 0.00 3.41
4481 5398 6.073276 TCGACAGTACAAAACAAATCATCCAG 60.073 38.462 0.00 0.00 0.00 3.86
4482 5399 5.772521 ACAGTACAAAACAAATCATCCAGC 58.227 37.500 0.00 0.00 0.00 4.85
4483 5400 5.536161 ACAGTACAAAACAAATCATCCAGCT 59.464 36.000 0.00 0.00 0.00 4.24
4484 5401 6.088824 CAGTACAAAACAAATCATCCAGCTC 58.911 40.000 0.00 0.00 0.00 4.09
4485 5402 5.769662 AGTACAAAACAAATCATCCAGCTCA 59.230 36.000 0.00 0.00 0.00 4.26
4486 5403 5.733620 ACAAAACAAATCATCCAGCTCAT 57.266 34.783 0.00 0.00 0.00 2.90
4487 5404 6.839124 ACAAAACAAATCATCCAGCTCATA 57.161 33.333 0.00 0.00 0.00 2.15
4488 5405 7.230849 ACAAAACAAATCATCCAGCTCATAA 57.769 32.000 0.00 0.00 0.00 1.90
4489 5406 7.092716 ACAAAACAAATCATCCAGCTCATAAC 58.907 34.615 0.00 0.00 0.00 1.89
4490 5407 6.839124 AAACAAATCATCCAGCTCATAACA 57.161 33.333 0.00 0.00 0.00 2.41
4491 5408 7.414222 AAACAAATCATCCAGCTCATAACAT 57.586 32.000 0.00 0.00 0.00 2.71
4492 5409 7.414222 AACAAATCATCCAGCTCATAACATT 57.586 32.000 0.00 0.00 0.00 2.71
4493 5410 7.414222 ACAAATCATCCAGCTCATAACATTT 57.586 32.000 0.00 0.00 0.00 2.32
4494 5411 7.486647 ACAAATCATCCAGCTCATAACATTTC 58.513 34.615 0.00 0.00 0.00 2.17
4495 5412 7.123098 ACAAATCATCCAGCTCATAACATTTCA 59.877 33.333 0.00 0.00 0.00 2.69
4496 5413 7.649533 AATCATCCAGCTCATAACATTTCAA 57.350 32.000 0.00 0.00 0.00 2.69
4497 5414 7.649533 ATCATCCAGCTCATAACATTTCAAA 57.350 32.000 0.00 0.00 0.00 2.69
4498 5415 7.649533 TCATCCAGCTCATAACATTTCAAAT 57.350 32.000 0.00 0.00 0.00 2.32
4499 5416 8.750515 TCATCCAGCTCATAACATTTCAAATA 57.249 30.769 0.00 0.00 0.00 1.40
4500 5417 8.623903 TCATCCAGCTCATAACATTTCAAATAC 58.376 33.333 0.00 0.00 0.00 1.89
4501 5418 7.936496 TCCAGCTCATAACATTTCAAATACA 57.064 32.000 0.00 0.00 0.00 2.29
4502 5419 8.347004 TCCAGCTCATAACATTTCAAATACAA 57.653 30.769 0.00 0.00 0.00 2.41
4503 5420 8.801299 TCCAGCTCATAACATTTCAAATACAAA 58.199 29.630 0.00 0.00 0.00 2.83
4504 5421 9.079833 CCAGCTCATAACATTTCAAATACAAAG 57.920 33.333 0.00 0.00 0.00 2.77
4505 5422 9.630098 CAGCTCATAACATTTCAAATACAAAGT 57.370 29.630 0.00 0.00 0.00 2.66
4542 5459 8.510505 ACTTCATCTACTTCTTGATTCAAAAGC 58.489 33.333 15.30 0.00 0.00 3.51
4543 5460 7.383102 TCATCTACTTCTTGATTCAAAAGCC 57.617 36.000 15.30 0.00 0.00 4.35
4544 5461 7.170965 TCATCTACTTCTTGATTCAAAAGCCT 58.829 34.615 15.30 5.92 0.00 4.58
4545 5462 7.667219 TCATCTACTTCTTGATTCAAAAGCCTT 59.333 33.333 15.30 5.47 0.00 4.35
4546 5463 7.440523 TCTACTTCTTGATTCAAAAGCCTTC 57.559 36.000 15.30 0.00 0.00 3.46
4547 5464 5.113502 ACTTCTTGATTCAAAAGCCTTCG 57.886 39.130 15.30 0.00 0.00 3.79
4548 5465 4.022849 ACTTCTTGATTCAAAAGCCTTCGG 60.023 41.667 15.30 0.00 0.00 4.30
4549 5466 3.750371 TCTTGATTCAAAAGCCTTCGGA 58.250 40.909 0.01 0.00 0.00 4.55
4550 5467 3.502211 TCTTGATTCAAAAGCCTTCGGAC 59.498 43.478 0.01 0.00 0.00 4.79
4551 5468 3.140325 TGATTCAAAAGCCTTCGGACT 57.860 42.857 0.00 0.00 0.00 3.85
4552 5469 4.280436 TGATTCAAAAGCCTTCGGACTA 57.720 40.909 0.00 0.00 0.00 2.59
4553 5470 4.647611 TGATTCAAAAGCCTTCGGACTAA 58.352 39.130 0.00 0.00 0.00 2.24
4554 5471 4.695455 TGATTCAAAAGCCTTCGGACTAAG 59.305 41.667 0.00 0.00 0.00 2.18
4555 5472 4.345859 TTCAAAAGCCTTCGGACTAAGA 57.654 40.909 0.00 0.00 0.00 2.10
4556 5473 4.553330 TCAAAAGCCTTCGGACTAAGAT 57.447 40.909 0.00 0.00 0.00 2.40
4557 5474 4.906618 TCAAAAGCCTTCGGACTAAGATT 58.093 39.130 0.00 0.00 0.00 2.40
4558 5475 4.935808 TCAAAAGCCTTCGGACTAAGATTC 59.064 41.667 0.00 0.00 0.00 2.52
4559 5476 3.545366 AAGCCTTCGGACTAAGATTCC 57.455 47.619 0.00 0.00 0.00 3.01
4560 5477 2.467880 AGCCTTCGGACTAAGATTCCA 58.532 47.619 0.00 0.00 31.94 3.53
4561 5478 3.041946 AGCCTTCGGACTAAGATTCCAT 58.958 45.455 0.00 0.00 31.94 3.41
4562 5479 3.456277 AGCCTTCGGACTAAGATTCCATT 59.544 43.478 0.00 0.00 31.94 3.16
4563 5480 4.080299 AGCCTTCGGACTAAGATTCCATTT 60.080 41.667 0.00 0.00 31.94 2.32
4564 5481 4.035675 GCCTTCGGACTAAGATTCCATTTG 59.964 45.833 0.00 0.00 31.94 2.32
4565 5482 5.186198 CCTTCGGACTAAGATTCCATTTGT 58.814 41.667 0.00 0.00 31.94 2.83
4566 5483 5.648092 CCTTCGGACTAAGATTCCATTTGTT 59.352 40.000 0.00 0.00 31.94 2.83
4567 5484 6.151144 CCTTCGGACTAAGATTCCATTTGTTT 59.849 38.462 0.00 0.00 31.94 2.83
4568 5485 7.335924 CCTTCGGACTAAGATTCCATTTGTTTA 59.664 37.037 0.00 0.00 31.94 2.01
4569 5486 7.605410 TCGGACTAAGATTCCATTTGTTTAC 57.395 36.000 0.00 0.00 31.94 2.01
4570 5487 7.162761 TCGGACTAAGATTCCATTTGTTTACA 58.837 34.615 0.00 0.00 31.94 2.41
4571 5488 7.827236 TCGGACTAAGATTCCATTTGTTTACAT 59.173 33.333 0.00 0.00 31.94 2.29
4572 5489 7.910162 CGGACTAAGATTCCATTTGTTTACATG 59.090 37.037 0.00 0.00 31.94 3.21
4573 5490 8.739972 GGACTAAGATTCCATTTGTTTACATGT 58.260 33.333 2.69 2.69 32.82 3.21
4579 5496 8.462016 AGATTCCATTTGTTTACATGTAAGAGC 58.538 33.333 17.36 12.47 0.00 4.09
4580 5497 7.759489 TTCCATTTGTTTACATGTAAGAGCT 57.241 32.000 17.36 0.00 0.00 4.09
4581 5498 8.856153 TTCCATTTGTTTACATGTAAGAGCTA 57.144 30.769 17.36 7.44 0.00 3.32
4582 5499 8.492673 TCCATTTGTTTACATGTAAGAGCTAG 57.507 34.615 17.36 8.70 0.00 3.42
4583 5500 7.065803 TCCATTTGTTTACATGTAAGAGCTAGC 59.934 37.037 17.36 6.62 0.00 3.42
4584 5501 7.066284 CCATTTGTTTACATGTAAGAGCTAGCT 59.934 37.037 19.45 19.45 0.00 3.32
4585 5502 7.979444 TTTGTTTACATGTAAGAGCTAGCTT 57.021 32.000 20.42 6.41 0.00 3.74
4586 5503 9.667107 ATTTGTTTACATGTAAGAGCTAGCTTA 57.333 29.630 20.42 5.24 0.00 3.09
4587 5504 9.667107 TTTGTTTACATGTAAGAGCTAGCTTAT 57.333 29.630 20.42 13.27 33.34 1.73
4588 5505 8.648557 TGTTTACATGTAAGAGCTAGCTTATG 57.351 34.615 20.42 18.56 33.34 1.90
4589 5506 8.258007 TGTTTACATGTAAGAGCTAGCTTATGT 58.742 33.333 20.42 22.39 33.76 2.29
4590 5507 8.756864 GTTTACATGTAAGAGCTAGCTTATGTC 58.243 37.037 20.42 5.68 32.35 3.06
4591 5508 6.471233 ACATGTAAGAGCTAGCTTATGTCA 57.529 37.500 20.42 14.52 33.34 3.58
4592 5509 7.060383 ACATGTAAGAGCTAGCTTATGTCAT 57.940 36.000 20.42 15.99 33.34 3.06
4593 5510 7.151308 ACATGTAAGAGCTAGCTTATGTCATC 58.849 38.462 20.42 3.25 33.34 2.92
4594 5511 6.968263 TGTAAGAGCTAGCTTATGTCATCT 57.032 37.500 20.42 5.83 33.34 2.90
4595 5512 7.353414 TGTAAGAGCTAGCTTATGTCATCTT 57.647 36.000 20.42 16.40 33.34 2.40
4596 5513 7.786030 TGTAAGAGCTAGCTTATGTCATCTTT 58.214 34.615 20.42 0.00 33.34 2.52
4597 5514 7.708322 TGTAAGAGCTAGCTTATGTCATCTTTG 59.292 37.037 20.42 0.00 33.34 2.77
4598 5515 5.055812 AGAGCTAGCTTATGTCATCTTTGC 58.944 41.667 20.42 0.06 0.00 3.68
4599 5516 4.133078 AGCTAGCTTATGTCATCTTTGCC 58.867 43.478 12.68 0.00 0.00 4.52
4600 5517 3.879295 GCTAGCTTATGTCATCTTTGCCA 59.121 43.478 7.70 0.00 0.00 4.92
4601 5518 4.024218 GCTAGCTTATGTCATCTTTGCCAG 60.024 45.833 7.70 0.00 0.00 4.85
4602 5519 3.285484 AGCTTATGTCATCTTTGCCAGG 58.715 45.455 0.00 0.00 0.00 4.45
4603 5520 3.054139 AGCTTATGTCATCTTTGCCAGGA 60.054 43.478 0.00 0.00 0.00 3.86
4604 5521 3.887716 GCTTATGTCATCTTTGCCAGGAT 59.112 43.478 0.00 0.00 0.00 3.24
4605 5522 4.340381 GCTTATGTCATCTTTGCCAGGATT 59.660 41.667 0.00 0.00 0.00 3.01
4606 5523 5.163478 GCTTATGTCATCTTTGCCAGGATTT 60.163 40.000 0.00 0.00 0.00 2.17
4607 5524 4.996788 ATGTCATCTTTGCCAGGATTTC 57.003 40.909 0.00 0.00 0.00 2.17
4608 5525 3.765381 TGTCATCTTTGCCAGGATTTCA 58.235 40.909 0.00 0.00 0.00 2.69
4609 5526 4.346730 TGTCATCTTTGCCAGGATTTCAT 58.653 39.130 0.00 0.00 0.00 2.57
4610 5527 4.158949 TGTCATCTTTGCCAGGATTTCATG 59.841 41.667 0.00 0.00 0.00 3.07
4611 5528 4.159135 GTCATCTTTGCCAGGATTTCATGT 59.841 41.667 0.00 0.00 0.00 3.21
4612 5529 4.400251 TCATCTTTGCCAGGATTTCATGTC 59.600 41.667 0.00 0.00 0.00 3.06
4613 5530 4.038271 TCTTTGCCAGGATTTCATGTCT 57.962 40.909 0.00 0.00 0.00 3.41
4614 5531 4.410099 TCTTTGCCAGGATTTCATGTCTT 58.590 39.130 0.00 0.00 0.00 3.01
4615 5532 4.219070 TCTTTGCCAGGATTTCATGTCTTG 59.781 41.667 0.00 0.00 0.00 3.02
4616 5533 3.438216 TGCCAGGATTTCATGTCTTGA 57.562 42.857 0.00 0.00 0.00 3.02
4617 5534 3.349927 TGCCAGGATTTCATGTCTTGAG 58.650 45.455 0.00 0.00 35.27 3.02
4618 5535 2.098770 GCCAGGATTTCATGTCTTGAGC 59.901 50.000 0.00 0.00 35.27 4.26
4619 5536 3.349927 CCAGGATTTCATGTCTTGAGCA 58.650 45.455 0.00 0.00 35.27 4.26
4620 5537 3.952323 CCAGGATTTCATGTCTTGAGCAT 59.048 43.478 0.00 0.00 35.27 3.79
4621 5538 4.401519 CCAGGATTTCATGTCTTGAGCATT 59.598 41.667 0.00 0.00 35.27 3.56
4622 5539 5.340803 CAGGATTTCATGTCTTGAGCATTG 58.659 41.667 0.00 0.00 35.27 2.82
4623 5540 4.401519 AGGATTTCATGTCTTGAGCATTGG 59.598 41.667 0.00 0.00 35.27 3.16
4624 5541 3.581024 TTTCATGTCTTGAGCATTGGC 57.419 42.857 0.00 0.00 35.27 4.52
4636 5553 1.251251 GCATTGGCTTTGAGTGGAGT 58.749 50.000 0.00 0.00 36.96 3.85
4637 5554 1.615392 GCATTGGCTTTGAGTGGAGTT 59.385 47.619 0.00 0.00 36.96 3.01
4638 5555 2.036346 GCATTGGCTTTGAGTGGAGTTT 59.964 45.455 0.00 0.00 36.96 2.66
4639 5556 3.858503 GCATTGGCTTTGAGTGGAGTTTC 60.859 47.826 0.00 0.00 36.96 2.78
4640 5557 3.297134 TTGGCTTTGAGTGGAGTTTCT 57.703 42.857 0.00 0.00 0.00 2.52
4641 5558 2.575532 TGGCTTTGAGTGGAGTTTCTG 58.424 47.619 0.00 0.00 0.00 3.02
4642 5559 1.882623 GGCTTTGAGTGGAGTTTCTGG 59.117 52.381 0.00 0.00 0.00 3.86
4643 5560 2.576615 GCTTTGAGTGGAGTTTCTGGT 58.423 47.619 0.00 0.00 0.00 4.00
4644 5561 3.496160 GGCTTTGAGTGGAGTTTCTGGTA 60.496 47.826 0.00 0.00 0.00 3.25
4645 5562 4.134563 GCTTTGAGTGGAGTTTCTGGTAA 58.865 43.478 0.00 0.00 0.00 2.85
4646 5563 4.762251 GCTTTGAGTGGAGTTTCTGGTAAT 59.238 41.667 0.00 0.00 0.00 1.89
4647 5564 5.335191 GCTTTGAGTGGAGTTTCTGGTAATG 60.335 44.000 0.00 0.00 0.00 1.90
4648 5565 3.674997 TGAGTGGAGTTTCTGGTAATGC 58.325 45.455 0.00 0.00 0.00 3.56
4649 5566 3.072330 TGAGTGGAGTTTCTGGTAATGCA 59.928 43.478 0.00 0.00 0.00 3.96
4650 5567 4.263462 TGAGTGGAGTTTCTGGTAATGCAT 60.263 41.667 0.00 0.00 0.00 3.96
4651 5568 4.012374 AGTGGAGTTTCTGGTAATGCATG 58.988 43.478 0.00 0.00 0.00 4.06
4652 5569 4.009675 GTGGAGTTTCTGGTAATGCATGA 58.990 43.478 0.00 0.00 0.00 3.07
4653 5570 4.458989 GTGGAGTTTCTGGTAATGCATGAA 59.541 41.667 0.00 0.00 0.00 2.57
4654 5571 5.126061 GTGGAGTTTCTGGTAATGCATGAAT 59.874 40.000 0.00 0.00 0.00 2.57
4655 5572 5.716228 TGGAGTTTCTGGTAATGCATGAATT 59.284 36.000 3.88 3.88 0.00 2.17
4656 5573 6.889177 TGGAGTTTCTGGTAATGCATGAATTA 59.111 34.615 0.00 1.62 0.00 1.40
4657 5574 7.560991 TGGAGTTTCTGGTAATGCATGAATTAT 59.439 33.333 9.42 0.00 0.00 1.28
4658 5575 7.864379 GGAGTTTCTGGTAATGCATGAATTATG 59.136 37.037 9.42 4.08 39.88 1.90
4674 5591 8.697067 CATGAATTATGCTAGCACAAAATTAGC 58.303 33.333 22.07 14.29 40.09 3.09
4675 5592 7.202526 TGAATTATGCTAGCACAAAATTAGCC 58.797 34.615 22.07 13.70 39.17 3.93
4676 5593 6.713762 ATTATGCTAGCACAAAATTAGCCA 57.286 33.333 22.07 0.00 39.17 4.75
4677 5594 6.522625 TTATGCTAGCACAAAATTAGCCAA 57.477 33.333 22.07 0.00 39.17 4.52
4678 5595 4.862902 TGCTAGCACAAAATTAGCCAAA 57.137 36.364 14.93 0.00 39.17 3.28
4679 5596 5.404466 TGCTAGCACAAAATTAGCCAAAT 57.596 34.783 14.93 0.00 39.17 2.32
4680 5597 6.522625 TGCTAGCACAAAATTAGCCAAATA 57.477 33.333 14.93 0.00 39.17 1.40
4681 5598 7.111247 TGCTAGCACAAAATTAGCCAAATAT 57.889 32.000 14.93 0.00 39.17 1.28
4682 5599 8.231692 TGCTAGCACAAAATTAGCCAAATATA 57.768 30.769 14.93 0.00 39.17 0.86
4683 5600 8.690884 TGCTAGCACAAAATTAGCCAAATATAA 58.309 29.630 14.93 0.00 39.17 0.98
4684 5601 9.696917 GCTAGCACAAAATTAGCCAAATATAAT 57.303 29.630 10.63 0.00 35.02 1.28
4714 5631 7.934855 ATCAAAGTGCATGATCTAACTTCTT 57.065 32.000 0.00 0.00 32.07 2.52
4716 5633 8.484641 TCAAAGTGCATGATCTAACTTCTTAG 57.515 34.615 0.00 0.00 31.81 2.18
4717 5634 8.097038 TCAAAGTGCATGATCTAACTTCTTAGT 58.903 33.333 0.00 0.00 31.81 2.24
4718 5635 8.725148 CAAAGTGCATGATCTAACTTCTTAGTT 58.275 33.333 0.00 0.00 46.18 2.24
4719 5636 7.840342 AGTGCATGATCTAACTTCTTAGTTG 57.160 36.000 0.00 0.00 44.22 3.16
4720 5637 7.390027 AGTGCATGATCTAACTTCTTAGTTGT 58.610 34.615 0.00 0.00 44.22 3.32
4721 5638 7.880195 AGTGCATGATCTAACTTCTTAGTTGTT 59.120 33.333 0.00 0.00 44.22 2.83
4722 5639 8.507249 GTGCATGATCTAACTTCTTAGTTGTTT 58.493 33.333 0.00 0.00 44.22 2.83
4723 5640 9.719355 TGCATGATCTAACTTCTTAGTTGTTTA 57.281 29.630 0.00 0.00 44.22 2.01
4733 5650 7.704271 ACTTCTTAGTTGTTTAGACAAAAGCC 58.296 34.615 0.00 0.00 46.62 4.35
4734 5651 7.556635 ACTTCTTAGTTGTTTAGACAAAAGCCT 59.443 33.333 0.00 0.00 46.62 4.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 3.436180 GGAGAATCAATCTTGCCCCAGAT 60.436 47.826 0.00 0.00 38.96 2.90
327 328 2.354704 CGATCCAGAGCCTTTAACCACA 60.355 50.000 0.00 0.00 0.00 4.17
397 398 5.624509 GCTGTTTCTTTCTTTCCAAACCTGT 60.625 40.000 0.00 0.00 0.00 4.00
429 430 1.206849 AGTGGTTTGCCTTGTTGTTGG 59.793 47.619 0.00 0.00 35.27 3.77
453 454 1.714794 AATGTTCTCAGCGACCTTCG 58.285 50.000 0.00 0.00 43.89 3.79
549 554 9.952188 AATGTACACTAGAAAAAGAAAGAAAGC 57.048 29.630 0.00 0.00 0.00 3.51
635 641 7.733773 TTAAGATAGGATGAGACACTCCAAA 57.266 36.000 0.00 0.00 33.75 3.28
640 646 9.152327 TCATTCATTAAGATAGGATGAGACACT 57.848 33.333 0.00 0.00 32.00 3.55
702 708 6.700520 ACACGTATTTTCCGATCCTATCTTTC 59.299 38.462 0.00 0.00 0.00 2.62
707 713 5.070047 AGGAACACGTATTTTCCGATCCTAT 59.930 40.000 14.06 0.00 45.27 2.57
708 714 4.403432 AGGAACACGTATTTTCCGATCCTA 59.597 41.667 14.06 0.00 45.27 2.94
709 715 3.197116 AGGAACACGTATTTTCCGATCCT 59.803 43.478 14.06 5.30 45.27 3.24
710 716 3.528532 AGGAACACGTATTTTCCGATCC 58.471 45.455 14.06 3.34 45.27 3.36
711 717 3.242248 CGAGGAACACGTATTTTCCGATC 59.758 47.826 14.06 8.58 45.27 3.69
712 718 3.119388 TCGAGGAACACGTATTTTCCGAT 60.119 43.478 14.06 2.09 45.27 4.18
713 719 2.228582 TCGAGGAACACGTATTTTCCGA 59.771 45.455 14.06 5.82 45.27 4.55
714 720 2.598589 TCGAGGAACACGTATTTTCCG 58.401 47.619 14.06 3.88 45.27 4.30
715 721 3.554731 GGATCGAGGAACACGTATTTTCC 59.445 47.826 12.70 12.70 44.14 3.13
716 722 3.554731 GGGATCGAGGAACACGTATTTTC 59.445 47.826 0.00 0.00 44.14 2.29
717 723 3.055675 TGGGATCGAGGAACACGTATTTT 60.056 43.478 0.00 0.00 44.14 1.82
718 724 2.498481 TGGGATCGAGGAACACGTATTT 59.502 45.455 0.00 0.00 44.14 1.40
719 725 2.104967 TGGGATCGAGGAACACGTATT 58.895 47.619 0.00 0.00 44.14 1.89
720 726 1.771565 TGGGATCGAGGAACACGTAT 58.228 50.000 0.00 0.00 44.14 3.06
721 727 1.548081 TTGGGATCGAGGAACACGTA 58.452 50.000 0.00 0.00 44.14 3.57
722 728 0.902531 ATTGGGATCGAGGAACACGT 59.097 50.000 0.00 0.00 44.14 4.49
723 729 1.571919 GATTGGGATCGAGGAACACG 58.428 55.000 0.00 0.00 45.37 4.49
733 739 2.636830 CCCTGATATGCGATTGGGATC 58.363 52.381 0.00 0.00 36.90 3.36
734 740 1.283029 CCCCTGATATGCGATTGGGAT 59.717 52.381 0.00 0.00 36.90 3.85
735 741 0.692476 CCCCTGATATGCGATTGGGA 59.308 55.000 0.00 0.00 36.90 4.37
736 742 0.322816 CCCCCTGATATGCGATTGGG 60.323 60.000 0.00 0.00 34.68 4.12
737 743 0.401738 ACCCCCTGATATGCGATTGG 59.598 55.000 0.00 0.00 0.00 3.16
738 744 1.202806 ACACCCCCTGATATGCGATTG 60.203 52.381 0.00 0.00 0.00 2.67
739 745 1.140312 ACACCCCCTGATATGCGATT 58.860 50.000 0.00 0.00 0.00 3.34
740 746 0.397941 CACACCCCCTGATATGCGAT 59.602 55.000 0.00 0.00 0.00 4.58
741 747 1.829456 CACACCCCCTGATATGCGA 59.171 57.895 0.00 0.00 0.00 5.10
742 748 1.893808 GCACACCCCCTGATATGCG 60.894 63.158 0.00 0.00 0.00 4.73
743 749 1.893808 CGCACACCCCCTGATATGC 60.894 63.158 0.00 0.00 0.00 3.14
744 750 0.815213 CACGCACACCCCCTGATATG 60.815 60.000 0.00 0.00 0.00 1.78
745 751 1.526887 CACGCACACCCCCTGATAT 59.473 57.895 0.00 0.00 0.00 1.63
746 752 2.986290 CACGCACACCCCCTGATA 59.014 61.111 0.00 0.00 0.00 2.15
747 753 4.722700 GCACGCACACCCCCTGAT 62.723 66.667 0.00 0.00 0.00 2.90
749 755 4.954970 AAGCACGCACACCCCCTG 62.955 66.667 0.00 0.00 0.00 4.45
750 756 4.954970 CAAGCACGCACACCCCCT 62.955 66.667 0.00 0.00 0.00 4.79
754 760 3.542629 GAAGGCAAGCACGCACACC 62.543 63.158 0.00 0.00 0.00 4.16
755 761 2.050985 GAAGGCAAGCACGCACAC 60.051 61.111 0.00 0.00 0.00 3.82
756 762 2.980213 TACGAAGGCAAGCACGCACA 62.980 55.000 0.00 0.00 0.00 4.57
757 763 1.837538 TTACGAAGGCAAGCACGCAC 61.838 55.000 0.00 0.00 0.00 5.34
758 764 1.160946 TTTACGAAGGCAAGCACGCA 61.161 50.000 0.00 0.00 0.00 5.24
759 765 0.452784 CTTTACGAAGGCAAGCACGC 60.453 55.000 0.00 0.00 0.00 5.34
760 766 1.144969 TCTTTACGAAGGCAAGCACG 58.855 50.000 0.00 0.00 33.56 5.34
761 767 2.729156 GCATCTTTACGAAGGCAAGCAC 60.729 50.000 0.00 0.00 33.56 4.40
762 768 1.468520 GCATCTTTACGAAGGCAAGCA 59.531 47.619 0.00 0.00 33.56 3.91
763 769 1.529826 CGCATCTTTACGAAGGCAAGC 60.530 52.381 0.00 0.00 33.56 4.01
764 770 1.529826 GCGCATCTTTACGAAGGCAAG 60.530 52.381 0.30 0.00 33.56 4.01
765 771 0.446222 GCGCATCTTTACGAAGGCAA 59.554 50.000 0.30 0.00 33.56 4.52
766 772 1.692148 CGCGCATCTTTACGAAGGCA 61.692 55.000 8.75 0.00 33.56 4.75
767 773 1.012234 CGCGCATCTTTACGAAGGC 60.012 57.895 8.75 0.00 33.56 4.35
768 774 0.025001 CACGCGCATCTTTACGAAGG 59.975 55.000 5.73 0.00 33.56 3.46
769 775 0.713883 ACACGCGCATCTTTACGAAG 59.286 50.000 5.73 0.00 0.00 3.79
770 776 1.141645 AACACGCGCATCTTTACGAA 58.858 45.000 5.73 0.00 0.00 3.85
771 777 1.125384 GAAACACGCGCATCTTTACGA 59.875 47.619 5.73 0.00 0.00 3.43
772 778 1.126113 AGAAACACGCGCATCTTTACG 59.874 47.619 5.73 0.00 0.00 3.18
836 842 0.326238 CTAGGGCCCCTCTTGGTGTA 60.326 60.000 21.43 0.00 34.61 2.90
837 843 1.616628 CTAGGGCCCCTCTTGGTGT 60.617 63.158 21.43 0.00 34.61 4.16
840 846 2.073101 GGTCTAGGGCCCCTCTTGG 61.073 68.421 21.43 0.91 34.61 3.61
841 847 0.621862 AAGGTCTAGGGCCCCTCTTG 60.622 60.000 21.43 0.43 34.61 3.02
843 849 1.003573 CAAGGTCTAGGGCCCCTCT 59.996 63.158 21.43 1.59 34.61 3.69
845 851 1.003573 CTCAAGGTCTAGGGCCCCT 59.996 63.158 21.43 7.84 37.71 4.79
846 852 2.747443 GCTCAAGGTCTAGGGCCCC 61.747 68.421 21.43 1.70 0.00 5.80
847 853 1.690985 AGCTCAAGGTCTAGGGCCC 60.691 63.158 16.46 16.46 0.00 5.80
848 854 1.524482 CAGCTCAAGGTCTAGGGCC 59.476 63.158 0.00 0.00 0.00 5.80
849 855 1.268283 ACCAGCTCAAGGTCTAGGGC 61.268 60.000 0.00 0.00 32.90 5.19
850 856 2.998493 ACCAGCTCAAGGTCTAGGG 58.002 57.895 0.00 0.00 32.90 3.53
856 862 2.743718 CCGTGACCAGCTCAAGGT 59.256 61.111 0.00 0.00 42.14 3.50
885 891 1.144936 GAGATTGGGAGAGGGCGTG 59.855 63.158 0.00 0.00 0.00 5.34
1332 1352 2.927856 TTGGAGAAGAGGCCGGCA 60.928 61.111 30.85 0.00 0.00 5.69
1386 1406 1.323271 GGTCGATGCTCTCCCAGACA 61.323 60.000 0.00 0.00 0.00 3.41
1527 1547 1.293179 CTCCTGCACGGACACATCA 59.707 57.895 1.25 0.00 36.69 3.07
1536 1556 2.328099 GCTTTCCCACTCCTGCACG 61.328 63.158 0.00 0.00 0.00 5.34
1572 1592 2.662196 TTGTTGCGCGCCGAGTAA 60.662 55.556 30.77 13.28 0.00 2.24
1704 1726 1.691195 TTTGAGCCCACGGTGTCTCA 61.691 55.000 19.68 19.68 34.16 3.27
1782 1804 2.306805 TGAATCTGACAGCCTGTCCAAT 59.693 45.455 21.57 12.05 46.40 3.16
1792 1814 2.746362 GCCCAGAAACTGAATCTGACAG 59.254 50.000 13.39 0.00 45.74 3.51
1797 1820 4.042187 ACAGTAAGCCCAGAAACTGAATCT 59.958 41.667 8.21 0.00 41.47 2.40
1902 2799 0.108709 CAGACCTGAGCAGCAGTCTC 60.109 60.000 0.00 0.00 43.33 3.36
1968 2865 0.879765 CAGCAACCTCTTCAAGCCTG 59.120 55.000 0.00 0.00 0.00 4.85
2055 2952 3.499737 CGGCATGCCTCGAACCAC 61.500 66.667 33.07 4.92 0.00 4.16
2100 2997 0.774276 TCACACCCCTGGCAATTACA 59.226 50.000 0.00 0.00 0.00 2.41
2171 3068 4.154918 CCCTGCTCTTGTTCAAATCACTAC 59.845 45.833 0.00 0.00 0.00 2.73
2862 3765 0.171903 CCAGCCATTTCTCCTTTGCG 59.828 55.000 0.00 0.00 0.00 4.85
3325 4232 5.473504 GTGTAGCTGGATTCTTTTTCCTTGA 59.526 40.000 0.00 0.00 34.17 3.02
3487 4394 0.382158 TTTGATTTGCGTTGCGGACA 59.618 45.000 0.00 0.00 0.00 4.02
3492 4399 1.981533 GAGCTCTTTGATTTGCGTTGC 59.018 47.619 6.43 0.00 0.00 4.17
3708 4615 2.665245 TGCAATGCATCGTTTCAGAACG 60.665 45.455 2.72 5.40 45.92 3.95
3792 4699 0.994247 TCAGGATGGCATCAACTGGT 59.006 50.000 27.39 3.21 36.16 4.00
3819 4726 0.535780 CTGCACCAAGAGCCAGAACA 60.536 55.000 0.00 0.00 0.00 3.18
3922 4837 3.935315 TCAGAAGTTTCAGAGCATGAGG 58.065 45.455 0.00 0.00 39.68 3.86
3936 4851 4.418973 AGCTACATGATGCATCAGAAGT 57.581 40.909 31.36 28.05 40.64 3.01
3998 4913 5.465390 TGTGCCAAAATATATGTCGCTACTC 59.535 40.000 0.00 0.00 0.00 2.59
3999 4914 5.364778 TGTGCCAAAATATATGTCGCTACT 58.635 37.500 0.00 0.00 0.00 2.57
4000 4915 5.465390 TCTGTGCCAAAATATATGTCGCTAC 59.535 40.000 0.00 0.00 0.00 3.58
4001 4916 5.606505 TCTGTGCCAAAATATATGTCGCTA 58.393 37.500 0.00 0.00 0.00 4.26
4002 4917 4.450976 TCTGTGCCAAAATATATGTCGCT 58.549 39.130 0.00 0.00 0.00 4.93
4003 4918 4.319766 CCTCTGTGCCAAAATATATGTCGC 60.320 45.833 0.00 0.00 0.00 5.19
4004 4919 4.214119 CCCTCTGTGCCAAAATATATGTCG 59.786 45.833 0.00 0.00 0.00 4.35
4005 4920 5.376625 TCCCTCTGTGCCAAAATATATGTC 58.623 41.667 0.00 0.00 0.00 3.06
4006 4921 5.103940 ACTCCCTCTGTGCCAAAATATATGT 60.104 40.000 0.00 0.00 0.00 2.29
4007 4922 5.380043 ACTCCCTCTGTGCCAAAATATATG 58.620 41.667 0.00 0.00 0.00 1.78
4008 4923 5.653255 ACTCCCTCTGTGCCAAAATATAT 57.347 39.130 0.00 0.00 0.00 0.86
4009 4924 5.665812 AGTACTCCCTCTGTGCCAAAATATA 59.334 40.000 0.00 0.00 0.00 0.86
4010 4925 4.475016 AGTACTCCCTCTGTGCCAAAATAT 59.525 41.667 0.00 0.00 0.00 1.28
4011 4926 3.844211 AGTACTCCCTCTGTGCCAAAATA 59.156 43.478 0.00 0.00 0.00 1.40
4012 4927 2.644798 AGTACTCCCTCTGTGCCAAAAT 59.355 45.455 0.00 0.00 0.00 1.82
4013 4928 2.054799 AGTACTCCCTCTGTGCCAAAA 58.945 47.619 0.00 0.00 0.00 2.44
4014 4929 1.729586 AGTACTCCCTCTGTGCCAAA 58.270 50.000 0.00 0.00 0.00 3.28
4015 4930 1.347707 CAAGTACTCCCTCTGTGCCAA 59.652 52.381 0.00 0.00 0.00 4.52
4016 4931 0.976641 CAAGTACTCCCTCTGTGCCA 59.023 55.000 0.00 0.00 0.00 4.92
4017 4932 1.205893 CTCAAGTACTCCCTCTGTGCC 59.794 57.143 0.00 0.00 0.00 5.01
4018 4933 2.171840 TCTCAAGTACTCCCTCTGTGC 58.828 52.381 0.00 0.00 0.00 4.57
4019 4934 6.531503 TTTATCTCAAGTACTCCCTCTGTG 57.468 41.667 0.00 0.00 0.00 3.66
4020 4935 7.741554 ATTTTATCTCAAGTACTCCCTCTGT 57.258 36.000 0.00 0.00 0.00 3.41
4136 5051 2.290960 GGACAGCCAACAAAGGGATACT 60.291 50.000 0.00 0.00 0.00 2.12
4138 5053 1.339631 CGGACAGCCAACAAAGGGATA 60.340 52.381 0.00 0.00 0.00 2.59
4139 5054 0.609131 CGGACAGCCAACAAAGGGAT 60.609 55.000 0.00 0.00 0.00 3.85
4142 5057 2.644992 GCGGACAGCCAACAAAGG 59.355 61.111 0.00 0.00 40.81 3.11
4190 5107 1.001974 AGCAGTACTCCACGCATGAAA 59.998 47.619 0.00 0.00 31.69 2.69
4202 5119 6.141083 TCTTATGGGGTAATACAGCAGTACT 58.859 40.000 0.00 0.00 31.96 2.73
4227 5144 1.332375 TGTCAACAAAGCGTGCTAACC 59.668 47.619 0.00 0.00 0.00 2.85
4233 5150 2.440501 GTTCACTGTCAACAAAGCGTG 58.559 47.619 0.00 0.00 0.00 5.34
4234 5151 1.400494 GGTTCACTGTCAACAAAGCGT 59.600 47.619 0.00 0.00 0.00 5.07
4235 5152 1.400142 TGGTTCACTGTCAACAAAGCG 59.600 47.619 0.00 0.00 0.00 4.68
4253 5170 0.254747 ACCATGTAATCACCGGGTGG 59.745 55.000 26.07 10.67 42.84 4.61
4254 5171 2.122783 AACCATGTAATCACCGGGTG 57.877 50.000 21.27 21.27 34.45 4.61
4255 5172 4.165372 AGAATAACCATGTAATCACCGGGT 59.835 41.667 6.32 0.00 0.00 5.28
4256 5173 4.714632 AGAATAACCATGTAATCACCGGG 58.285 43.478 6.32 0.00 0.00 5.73
4257 5174 5.505654 GCAAGAATAACCATGTAATCACCGG 60.506 44.000 0.00 0.00 0.00 5.28
4258 5175 5.505654 GGCAAGAATAACCATGTAATCACCG 60.506 44.000 0.00 0.00 0.00 4.94
4259 5176 5.594317 AGGCAAGAATAACCATGTAATCACC 59.406 40.000 0.00 0.00 0.00 4.02
4260 5177 6.511767 CGAGGCAAGAATAACCATGTAATCAC 60.512 42.308 0.00 0.00 0.00 3.06
4261 5178 5.527214 CGAGGCAAGAATAACCATGTAATCA 59.473 40.000 0.00 0.00 0.00 2.57
4262 5179 5.560953 GCGAGGCAAGAATAACCATGTAATC 60.561 44.000 0.00 0.00 0.00 1.75
4263 5180 4.275936 GCGAGGCAAGAATAACCATGTAAT 59.724 41.667 0.00 0.00 0.00 1.89
4264 5181 3.625764 GCGAGGCAAGAATAACCATGTAA 59.374 43.478 0.00 0.00 0.00 2.41
4265 5182 3.202906 GCGAGGCAAGAATAACCATGTA 58.797 45.455 0.00 0.00 0.00 2.29
4266 5183 2.017049 GCGAGGCAAGAATAACCATGT 58.983 47.619 0.00 0.00 0.00 3.21
4267 5184 1.334869 GGCGAGGCAAGAATAACCATG 59.665 52.381 0.00 0.00 0.00 3.66
4268 5185 1.212935 AGGCGAGGCAAGAATAACCAT 59.787 47.619 0.00 0.00 0.00 3.55
4269 5186 0.618458 AGGCGAGGCAAGAATAACCA 59.382 50.000 0.00 0.00 0.00 3.67
4270 5187 1.751437 AAGGCGAGGCAAGAATAACC 58.249 50.000 0.00 0.00 0.00 2.85
4271 5188 3.532542 ACTAAGGCGAGGCAAGAATAAC 58.467 45.455 0.00 0.00 0.00 1.89
4272 5189 3.906720 ACTAAGGCGAGGCAAGAATAA 57.093 42.857 0.00 0.00 0.00 1.40
4273 5190 3.906720 AACTAAGGCGAGGCAAGAATA 57.093 42.857 0.00 0.00 0.00 1.75
4274 5191 2.749621 CAAACTAAGGCGAGGCAAGAAT 59.250 45.455 0.00 0.00 0.00 2.40
4275 5192 2.151202 CAAACTAAGGCGAGGCAAGAA 58.849 47.619 0.00 0.00 0.00 2.52
4276 5193 1.071699 ACAAACTAAGGCGAGGCAAGA 59.928 47.619 0.00 0.00 0.00 3.02
4277 5194 1.197721 CACAAACTAAGGCGAGGCAAG 59.802 52.381 0.00 0.00 0.00 4.01
4278 5195 1.234821 CACAAACTAAGGCGAGGCAA 58.765 50.000 0.00 0.00 0.00 4.52
4279 5196 0.605319 CCACAAACTAAGGCGAGGCA 60.605 55.000 0.00 0.00 0.00 4.75
4280 5197 0.605589 ACCACAAACTAAGGCGAGGC 60.606 55.000 0.00 0.00 0.00 4.70
4281 5198 1.892209 AACCACAAACTAAGGCGAGG 58.108 50.000 0.00 0.00 0.00 4.63
4282 5199 2.225727 GGAAACCACAAACTAAGGCGAG 59.774 50.000 0.00 0.00 0.00 5.03
4283 5200 2.158726 AGGAAACCACAAACTAAGGCGA 60.159 45.455 0.00 0.00 0.00 5.54
4284 5201 2.227194 AGGAAACCACAAACTAAGGCG 58.773 47.619 0.00 0.00 0.00 5.52
4285 5202 5.372547 CTTAGGAAACCACAAACTAAGGC 57.627 43.478 0.00 0.00 37.83 4.35
4287 5204 7.222161 ACTACCTTAGGAAACCACAAACTAAG 58.778 38.462 4.77 0.00 39.97 2.18
4288 5205 7.140522 ACTACCTTAGGAAACCACAAACTAA 57.859 36.000 4.77 0.00 0.00 2.24
4289 5206 6.752285 ACTACCTTAGGAAACCACAAACTA 57.248 37.500 4.77 0.00 0.00 2.24
4290 5207 5.641789 ACTACCTTAGGAAACCACAAACT 57.358 39.130 4.77 0.00 0.00 2.66
4291 5208 6.938596 ACATACTACCTTAGGAAACCACAAAC 59.061 38.462 4.77 0.00 0.00 2.93
4292 5209 7.081857 ACATACTACCTTAGGAAACCACAAA 57.918 36.000 4.77 0.00 0.00 2.83
4293 5210 6.691255 ACATACTACCTTAGGAAACCACAA 57.309 37.500 4.77 0.00 0.00 3.33
4294 5211 7.184161 TCTACATACTACCTTAGGAAACCACA 58.816 38.462 4.77 0.00 0.00 4.17
4295 5212 7.651027 TCTACATACTACCTTAGGAAACCAC 57.349 40.000 4.77 0.00 0.00 4.16
4296 5213 8.063153 TGATCTACATACTACCTTAGGAAACCA 58.937 37.037 4.77 0.00 0.00 3.67
4297 5214 8.474710 TGATCTACATACTACCTTAGGAAACC 57.525 38.462 4.77 0.00 0.00 3.27
4300 5217 9.090103 CCATTGATCTACATACTACCTTAGGAA 57.910 37.037 4.77 0.00 0.00 3.36
4301 5218 8.453681 TCCATTGATCTACATACTACCTTAGGA 58.546 37.037 4.77 0.00 0.00 2.94
4302 5219 8.651589 TCCATTGATCTACATACTACCTTAGG 57.348 38.462 0.00 0.00 0.00 2.69
4304 5221 9.822727 TCATCCATTGATCTACATACTACCTTA 57.177 33.333 0.00 0.00 0.00 2.69
4305 5222 8.727100 TCATCCATTGATCTACATACTACCTT 57.273 34.615 0.00 0.00 0.00 3.50
4306 5223 8.727100 TTCATCCATTGATCTACATACTACCT 57.273 34.615 0.00 0.00 33.34 3.08
4307 5224 9.950496 ATTTCATCCATTGATCTACATACTACC 57.050 33.333 0.00 0.00 33.34 3.18
4319 5236 9.645128 TGGACATTAGTTATTTCATCCATTGAT 57.355 29.630 0.00 0.00 33.34 2.57
4320 5237 9.645128 ATGGACATTAGTTATTTCATCCATTGA 57.355 29.630 0.00 0.00 41.82 2.57
4331 5248 9.289782 GGCAAGAAGATATGGACATTAGTTATT 57.710 33.333 0.00 0.00 0.00 1.40
4332 5249 8.664079 AGGCAAGAAGATATGGACATTAGTTAT 58.336 33.333 0.00 0.00 0.00 1.89
4333 5250 8.034313 AGGCAAGAAGATATGGACATTAGTTA 57.966 34.615 0.00 0.00 0.00 2.24
4334 5251 6.904626 AGGCAAGAAGATATGGACATTAGTT 58.095 36.000 0.00 0.00 0.00 2.24
4335 5252 6.506538 AGGCAAGAAGATATGGACATTAGT 57.493 37.500 0.00 0.00 0.00 2.24
4336 5253 5.636965 CGAGGCAAGAAGATATGGACATTAG 59.363 44.000 0.00 0.00 0.00 1.73
4337 5254 5.541845 CGAGGCAAGAAGATATGGACATTA 58.458 41.667 0.00 0.00 0.00 1.90
4338 5255 4.384056 CGAGGCAAGAAGATATGGACATT 58.616 43.478 0.00 0.00 0.00 2.71
4339 5256 3.805108 GCGAGGCAAGAAGATATGGACAT 60.805 47.826 0.00 0.00 0.00 3.06
4340 5257 2.483714 GCGAGGCAAGAAGATATGGACA 60.484 50.000 0.00 0.00 0.00 4.02
4341 5258 2.139118 GCGAGGCAAGAAGATATGGAC 58.861 52.381 0.00 0.00 0.00 4.02
4342 5259 1.070758 GGCGAGGCAAGAAGATATGGA 59.929 52.381 0.00 0.00 0.00 3.41
4343 5260 1.071385 AGGCGAGGCAAGAAGATATGG 59.929 52.381 0.00 0.00 0.00 2.74
4344 5261 2.540265 AGGCGAGGCAAGAAGATATG 57.460 50.000 0.00 0.00 0.00 1.78
4345 5262 3.643792 ACTAAGGCGAGGCAAGAAGATAT 59.356 43.478 0.00 0.00 0.00 1.63
4346 5263 3.031736 ACTAAGGCGAGGCAAGAAGATA 58.968 45.455 0.00 0.00 0.00 1.98
4347 5264 1.834263 ACTAAGGCGAGGCAAGAAGAT 59.166 47.619 0.00 0.00 0.00 2.40
4348 5265 1.267121 ACTAAGGCGAGGCAAGAAGA 58.733 50.000 0.00 0.00 0.00 2.87
4349 5266 2.100605 AACTAAGGCGAGGCAAGAAG 57.899 50.000 0.00 0.00 0.00 2.85
4350 5267 2.565834 ACTAACTAAGGCGAGGCAAGAA 59.434 45.455 0.00 0.00 0.00 2.52
4351 5268 2.094182 CACTAACTAAGGCGAGGCAAGA 60.094 50.000 0.00 0.00 0.00 3.02
4352 5269 2.271800 CACTAACTAAGGCGAGGCAAG 58.728 52.381 0.00 0.00 0.00 4.01
4353 5270 1.066430 CCACTAACTAAGGCGAGGCAA 60.066 52.381 0.00 0.00 0.00 4.52
4354 5271 0.535335 CCACTAACTAAGGCGAGGCA 59.465 55.000 0.00 0.00 0.00 4.75
4355 5272 0.535797 ACCACTAACTAAGGCGAGGC 59.464 55.000 0.00 0.00 0.00 4.70
4356 5273 3.259902 GAAACCACTAACTAAGGCGAGG 58.740 50.000 0.00 0.00 0.00 4.63
4357 5274 3.056035 AGGAAACCACTAACTAAGGCGAG 60.056 47.826 0.00 0.00 0.00 5.03
4358 5275 2.901839 AGGAAACCACTAACTAAGGCGA 59.098 45.455 0.00 0.00 0.00 5.54
4359 5276 3.329929 AGGAAACCACTAACTAAGGCG 57.670 47.619 0.00 0.00 0.00 5.52
4362 5279 8.131847 ACTACCTTAGGAAACCACTAACTAAG 57.868 38.462 4.77 0.00 39.97 2.18
4363 5280 9.774071 ATACTACCTTAGGAAACCACTAACTAA 57.226 33.333 4.77 0.00 0.00 2.24
4365 5282 9.948747 ATATACTACCTTAGGAAACCACTAACT 57.051 33.333 4.77 0.00 0.00 2.24
4394 5311 9.645128 TGGACATTAGTTATTTCATCCATTGAT 57.355 29.630 0.00 0.00 33.34 2.57
4395 5312 9.645128 ATGGACATTAGTTATTTCATCCATTGA 57.355 29.630 0.00 0.00 41.82 2.57
4414 5331 9.645128 TGTTTCCTTATGAAATGATATGGACAT 57.355 29.630 0.00 0.00 44.44 3.06
4415 5332 8.902806 GTGTTTCCTTATGAAATGATATGGACA 58.097 33.333 0.00 0.00 44.44 4.02
4416 5333 8.070171 CGTGTTTCCTTATGAAATGATATGGAC 58.930 37.037 0.00 0.00 44.44 4.02
4417 5334 7.990314 TCGTGTTTCCTTATGAAATGATATGGA 59.010 33.333 0.00 0.00 44.44 3.41
4418 5335 8.070171 GTCGTGTTTCCTTATGAAATGATATGG 58.930 37.037 0.00 0.00 44.44 2.74
4419 5336 8.611757 TGTCGTGTTTCCTTATGAAATGATATG 58.388 33.333 0.00 0.00 44.44 1.78
4420 5337 8.731275 TGTCGTGTTTCCTTATGAAATGATAT 57.269 30.769 0.00 0.00 44.44 1.63
4421 5338 8.554835 TTGTCGTGTTTCCTTATGAAATGATA 57.445 30.769 0.00 0.00 44.44 2.15
4422 5339 7.447374 TTGTCGTGTTTCCTTATGAAATGAT 57.553 32.000 0.00 0.00 44.44 2.45
4423 5340 6.869315 TTGTCGTGTTTCCTTATGAAATGA 57.131 33.333 0.00 0.00 44.44 2.57
4424 5341 9.787532 ATATTTGTCGTGTTTCCTTATGAAATG 57.212 29.630 0.00 0.00 44.44 2.32
4427 5344 9.834628 GAAATATTTGTCGTGTTTCCTTATGAA 57.165 29.630 5.17 0.00 0.00 2.57
4428 5345 9.004717 TGAAATATTTGTCGTGTTTCCTTATGA 57.995 29.630 5.17 0.00 0.00 2.15
4429 5346 9.787532 ATGAAATATTTGTCGTGTTTCCTTATG 57.212 29.630 5.17 0.00 0.00 1.90
4431 5348 9.834628 GAATGAAATATTTGTCGTGTTTCCTTA 57.165 29.630 5.17 0.00 0.00 2.69
4432 5349 7.537306 CGAATGAAATATTTGTCGTGTTTCCTT 59.463 33.333 5.17 0.00 0.00 3.36
4433 5350 7.021196 CGAATGAAATATTTGTCGTGTTTCCT 58.979 34.615 5.17 0.00 0.00 3.36
4434 5351 7.007099 GTCGAATGAAATATTTGTCGTGTTTCC 59.993 37.037 18.00 0.00 0.00 3.13
4435 5352 7.532546 TGTCGAATGAAATATTTGTCGTGTTTC 59.467 33.333 18.00 0.00 0.00 2.78
4436 5353 7.356540 TGTCGAATGAAATATTTGTCGTGTTT 58.643 30.769 18.00 0.63 0.00 2.83
4437 5354 6.893759 TGTCGAATGAAATATTTGTCGTGTT 58.106 32.000 18.00 2.55 0.00 3.32
4438 5355 6.147164 ACTGTCGAATGAAATATTTGTCGTGT 59.853 34.615 18.00 14.21 0.00 4.49
4439 5356 6.534059 ACTGTCGAATGAAATATTTGTCGTG 58.466 36.000 18.00 13.82 0.00 4.35
4440 5357 6.721571 ACTGTCGAATGAAATATTTGTCGT 57.278 33.333 18.00 2.03 0.00 4.34
4441 5358 7.671827 TGTACTGTCGAATGAAATATTTGTCG 58.328 34.615 5.17 11.43 0.00 4.35
4442 5359 9.820229 TTTGTACTGTCGAATGAAATATTTGTC 57.180 29.630 5.17 0.00 0.00 3.18
4449 5366 9.180678 GATTTGTTTTGTACTGTCGAATGAAAT 57.819 29.630 0.00 0.00 0.00 2.17
4450 5367 8.184848 TGATTTGTTTTGTACTGTCGAATGAAA 58.815 29.630 0.00 0.00 0.00 2.69
4451 5368 7.698628 TGATTTGTTTTGTACTGTCGAATGAA 58.301 30.769 0.00 0.00 0.00 2.57
4452 5369 7.252965 TGATTTGTTTTGTACTGTCGAATGA 57.747 32.000 0.00 0.00 0.00 2.57
4453 5370 7.271223 GGATGATTTGTTTTGTACTGTCGAATG 59.729 37.037 0.00 0.00 0.00 2.67
4454 5371 7.040755 TGGATGATTTGTTTTGTACTGTCGAAT 60.041 33.333 0.00 0.00 0.00 3.34
4455 5372 6.261158 TGGATGATTTGTTTTGTACTGTCGAA 59.739 34.615 0.00 0.00 0.00 3.71
4456 5373 5.760743 TGGATGATTTGTTTTGTACTGTCGA 59.239 36.000 0.00 0.00 0.00 4.20
4457 5374 5.996219 TGGATGATTTGTTTTGTACTGTCG 58.004 37.500 0.00 0.00 0.00 4.35
4458 5375 5.858581 GCTGGATGATTTGTTTTGTACTGTC 59.141 40.000 0.00 0.00 0.00 3.51
4459 5376 5.536161 AGCTGGATGATTTGTTTTGTACTGT 59.464 36.000 0.00 0.00 0.00 3.55
4460 5377 6.017400 AGCTGGATGATTTGTTTTGTACTG 57.983 37.500 0.00 0.00 0.00 2.74
4461 5378 5.769662 TGAGCTGGATGATTTGTTTTGTACT 59.230 36.000 0.00 0.00 0.00 2.73
4462 5379 6.012658 TGAGCTGGATGATTTGTTTTGTAC 57.987 37.500 0.00 0.00 0.00 2.90
4463 5380 6.839124 ATGAGCTGGATGATTTGTTTTGTA 57.161 33.333 0.00 0.00 0.00 2.41
4464 5381 5.733620 ATGAGCTGGATGATTTGTTTTGT 57.266 34.783 0.00 0.00 0.00 2.83
4465 5382 7.092079 TGTTATGAGCTGGATGATTTGTTTTG 58.908 34.615 0.00 0.00 0.00 2.44
4466 5383 7.230849 TGTTATGAGCTGGATGATTTGTTTT 57.769 32.000 0.00 0.00 0.00 2.43
4467 5384 6.839124 TGTTATGAGCTGGATGATTTGTTT 57.161 33.333 0.00 0.00 0.00 2.83
4468 5385 7.414222 AATGTTATGAGCTGGATGATTTGTT 57.586 32.000 0.00 0.00 0.00 2.83
4469 5386 7.123098 TGAAATGTTATGAGCTGGATGATTTGT 59.877 33.333 0.00 0.00 0.00 2.83
4470 5387 7.485810 TGAAATGTTATGAGCTGGATGATTTG 58.514 34.615 0.00 0.00 0.00 2.32
4471 5388 7.649533 TGAAATGTTATGAGCTGGATGATTT 57.350 32.000 0.00 0.00 0.00 2.17
4472 5389 7.649533 TTGAAATGTTATGAGCTGGATGATT 57.350 32.000 0.00 0.00 0.00 2.57
4473 5390 7.649533 TTTGAAATGTTATGAGCTGGATGAT 57.350 32.000 0.00 0.00 0.00 2.45
4474 5391 7.649533 ATTTGAAATGTTATGAGCTGGATGA 57.350 32.000 0.00 0.00 0.00 2.92
4475 5392 8.407832 TGTATTTGAAATGTTATGAGCTGGATG 58.592 33.333 0.00 0.00 0.00 3.51
4476 5393 8.523915 TGTATTTGAAATGTTATGAGCTGGAT 57.476 30.769 0.00 0.00 0.00 3.41
4477 5394 7.936496 TGTATTTGAAATGTTATGAGCTGGA 57.064 32.000 0.00 0.00 0.00 3.86
4478 5395 8.984891 TTTGTATTTGAAATGTTATGAGCTGG 57.015 30.769 0.00 0.00 0.00 4.85
4479 5396 9.630098 ACTTTGTATTTGAAATGTTATGAGCTG 57.370 29.630 0.00 0.00 0.00 4.24
4516 5433 8.510505 GCTTTTGAATCAAGAAGTAGATGAAGT 58.489 33.333 14.53 0.00 0.00 3.01
4517 5434 7.967303 GGCTTTTGAATCAAGAAGTAGATGAAG 59.033 37.037 14.53 6.24 0.00 3.02
4518 5435 7.667219 AGGCTTTTGAATCAAGAAGTAGATGAA 59.333 33.333 14.53 0.00 0.00 2.57
4519 5436 7.170965 AGGCTTTTGAATCAAGAAGTAGATGA 58.829 34.615 14.53 0.00 0.00 2.92
4520 5437 7.388460 AGGCTTTTGAATCAAGAAGTAGATG 57.612 36.000 14.53 0.00 0.00 2.90
4521 5438 7.148340 CGAAGGCTTTTGAATCAAGAAGTAGAT 60.148 37.037 0.00 0.00 0.00 1.98
4522 5439 6.147821 CGAAGGCTTTTGAATCAAGAAGTAGA 59.852 38.462 0.00 0.00 0.00 2.59
4523 5440 6.310197 CGAAGGCTTTTGAATCAAGAAGTAG 58.690 40.000 0.00 4.40 0.00 2.57
4524 5441 5.181245 CCGAAGGCTTTTGAATCAAGAAGTA 59.819 40.000 0.00 0.00 46.14 2.24
4525 5442 4.022849 CCGAAGGCTTTTGAATCAAGAAGT 60.023 41.667 0.00 1.99 46.14 3.01
4526 5443 4.479619 CCGAAGGCTTTTGAATCAAGAAG 58.520 43.478 0.00 11.08 46.14 2.85
4527 5444 4.503741 CCGAAGGCTTTTGAATCAAGAA 57.496 40.909 0.00 0.00 46.14 2.52
4543 5460 6.743575 AACAAATGGAATCTTAGTCCGAAG 57.256 37.500 0.00 0.00 38.06 3.79
4544 5461 7.662258 TGTAAACAAATGGAATCTTAGTCCGAA 59.338 33.333 0.00 0.00 38.06 4.30
4545 5462 7.162761 TGTAAACAAATGGAATCTTAGTCCGA 58.837 34.615 0.00 0.00 38.06 4.55
4546 5463 7.372451 TGTAAACAAATGGAATCTTAGTCCG 57.628 36.000 0.00 0.00 38.06 4.79
4547 5464 8.739972 ACATGTAAACAAATGGAATCTTAGTCC 58.260 33.333 0.00 0.00 35.55 3.85
4553 5470 8.462016 GCTCTTACATGTAAACAAATGGAATCT 58.538 33.333 18.55 0.00 0.00 2.40
4554 5471 8.462016 AGCTCTTACATGTAAACAAATGGAATC 58.538 33.333 18.55 6.28 0.00 2.52
4555 5472 8.353423 AGCTCTTACATGTAAACAAATGGAAT 57.647 30.769 18.55 1.38 0.00 3.01
4556 5473 7.759489 AGCTCTTACATGTAAACAAATGGAA 57.241 32.000 18.55 0.00 0.00 3.53
4557 5474 7.065803 GCTAGCTCTTACATGTAAACAAATGGA 59.934 37.037 18.55 9.83 0.00 3.41
4558 5475 7.066284 AGCTAGCTCTTACATGTAAACAAATGG 59.934 37.037 18.55 6.16 0.00 3.16
4559 5476 7.978982 AGCTAGCTCTTACATGTAAACAAATG 58.021 34.615 18.55 6.82 0.00 2.32
4560 5477 8.567285 AAGCTAGCTCTTACATGTAAACAAAT 57.433 30.769 19.65 7.32 0.00 2.32
4561 5478 7.979444 AAGCTAGCTCTTACATGTAAACAAA 57.021 32.000 19.65 4.97 0.00 2.83
4562 5479 9.098355 CATAAGCTAGCTCTTACATGTAAACAA 57.902 33.333 19.65 7.18 32.02 2.83
4563 5480 8.258007 ACATAAGCTAGCTCTTACATGTAAACA 58.742 33.333 19.65 8.01 32.02 2.83
4564 5481 8.649973 ACATAAGCTAGCTCTTACATGTAAAC 57.350 34.615 19.65 11.27 32.02 2.01
4565 5482 8.474831 TGACATAAGCTAGCTCTTACATGTAAA 58.525 33.333 19.65 10.95 29.94 2.01
4566 5483 8.007405 TGACATAAGCTAGCTCTTACATGTAA 57.993 34.615 19.65 17.16 29.94 2.41
4567 5484 7.582667 TGACATAAGCTAGCTCTTACATGTA 57.417 36.000 19.65 0.08 29.94 2.29
4568 5485 6.471233 TGACATAAGCTAGCTCTTACATGT 57.529 37.500 19.65 19.86 31.51 3.21
4569 5486 7.377398 AGATGACATAAGCTAGCTCTTACATG 58.623 38.462 19.65 17.12 32.02 3.21
4570 5487 7.537596 AGATGACATAAGCTAGCTCTTACAT 57.462 36.000 19.65 18.37 32.02 2.29
4571 5488 6.968263 AGATGACATAAGCTAGCTCTTACA 57.032 37.500 19.65 14.66 32.02 2.41
4572 5489 7.307101 GCAAAGATGACATAAGCTAGCTCTTAC 60.307 40.741 19.65 9.51 32.02 2.34
4573 5490 6.703607 GCAAAGATGACATAAGCTAGCTCTTA 59.296 38.462 19.65 8.27 33.56 2.10
4574 5491 5.526846 GCAAAGATGACATAAGCTAGCTCTT 59.473 40.000 19.65 11.53 0.00 2.85
4575 5492 5.055812 GCAAAGATGACATAAGCTAGCTCT 58.944 41.667 19.65 10.93 0.00 4.09
4576 5493 4.213059 GGCAAAGATGACATAAGCTAGCTC 59.787 45.833 19.65 5.78 33.41 4.09
4577 5494 4.133078 GGCAAAGATGACATAAGCTAGCT 58.867 43.478 12.68 12.68 33.41 3.32
4578 5495 3.879295 TGGCAAAGATGACATAAGCTAGC 59.121 43.478 6.62 6.62 40.56 3.42
4579 5496 4.514441 CCTGGCAAAGATGACATAAGCTAG 59.486 45.833 0.00 0.00 45.65 3.42
4580 5497 4.164030 TCCTGGCAAAGATGACATAAGCTA 59.836 41.667 0.00 0.00 45.65 3.32
4581 5498 3.054139 TCCTGGCAAAGATGACATAAGCT 60.054 43.478 0.00 0.00 45.65 3.74
4582 5499 3.282021 TCCTGGCAAAGATGACATAAGC 58.718 45.455 0.00 0.00 45.65 3.09
4583 5500 6.095860 TGAAATCCTGGCAAAGATGACATAAG 59.904 38.462 0.80 0.00 45.65 1.73
4584 5501 5.951148 TGAAATCCTGGCAAAGATGACATAA 59.049 36.000 0.80 0.00 45.65 1.90
4585 5502 5.508567 TGAAATCCTGGCAAAGATGACATA 58.491 37.500 0.80 0.00 45.65 2.29
4586 5503 4.346730 TGAAATCCTGGCAAAGATGACAT 58.653 39.130 0.80 0.00 45.65 3.06
4587 5504 3.765381 TGAAATCCTGGCAAAGATGACA 58.235 40.909 0.80 2.67 44.25 3.58
4588 5505 4.159135 ACATGAAATCCTGGCAAAGATGAC 59.841 41.667 0.00 0.49 34.00 3.06
4589 5506 4.346730 ACATGAAATCCTGGCAAAGATGA 58.653 39.130 0.00 0.00 0.00 2.92
4590 5507 4.401519 AGACATGAAATCCTGGCAAAGATG 59.598 41.667 0.00 0.00 0.00 2.90
4591 5508 4.607239 AGACATGAAATCCTGGCAAAGAT 58.393 39.130 0.00 0.00 0.00 2.40
4592 5509 4.038271 AGACATGAAATCCTGGCAAAGA 57.962 40.909 0.00 0.00 0.00 2.52
4593 5510 4.219070 TCAAGACATGAAATCCTGGCAAAG 59.781 41.667 0.00 0.00 34.30 2.77
4594 5511 4.151121 TCAAGACATGAAATCCTGGCAAA 58.849 39.130 0.00 0.00 34.30 3.68
4595 5512 3.760151 CTCAAGACATGAAATCCTGGCAA 59.240 43.478 0.00 0.00 37.67 4.52
4596 5513 3.349927 CTCAAGACATGAAATCCTGGCA 58.650 45.455 0.00 0.00 37.67 4.92
4597 5514 2.098770 GCTCAAGACATGAAATCCTGGC 59.901 50.000 0.00 0.00 37.67 4.85
4598 5515 3.349927 TGCTCAAGACATGAAATCCTGG 58.650 45.455 0.00 0.00 37.67 4.45
4599 5516 5.340803 CAATGCTCAAGACATGAAATCCTG 58.659 41.667 0.00 0.00 37.67 3.86
4600 5517 4.401519 CCAATGCTCAAGACATGAAATCCT 59.598 41.667 0.00 0.00 37.67 3.24
4601 5518 4.679662 CCAATGCTCAAGACATGAAATCC 58.320 43.478 0.00 0.00 37.67 3.01
4602 5519 4.110482 GCCAATGCTCAAGACATGAAATC 58.890 43.478 0.00 0.00 37.67 2.17
4603 5520 4.119442 GCCAATGCTCAAGACATGAAAT 57.881 40.909 0.00 0.00 37.67 2.17
4604 5521 3.581024 GCCAATGCTCAAGACATGAAA 57.419 42.857 0.00 0.00 37.67 2.69
4617 5534 1.251251 ACTCCACTCAAAGCCAATGC 58.749 50.000 0.00 0.00 37.95 3.56
4618 5535 3.571401 AGAAACTCCACTCAAAGCCAATG 59.429 43.478 0.00 0.00 0.00 2.82
4619 5536 3.571401 CAGAAACTCCACTCAAAGCCAAT 59.429 43.478 0.00 0.00 0.00 3.16
4620 5537 2.951642 CAGAAACTCCACTCAAAGCCAA 59.048 45.455 0.00 0.00 0.00 4.52
4621 5538 2.575532 CAGAAACTCCACTCAAAGCCA 58.424 47.619 0.00 0.00 0.00 4.75
4622 5539 1.882623 CCAGAAACTCCACTCAAAGCC 59.117 52.381 0.00 0.00 0.00 4.35
4623 5540 2.576615 ACCAGAAACTCCACTCAAAGC 58.423 47.619 0.00 0.00 0.00 3.51
4624 5541 5.335191 GCATTACCAGAAACTCCACTCAAAG 60.335 44.000 0.00 0.00 0.00 2.77
4625 5542 4.518970 GCATTACCAGAAACTCCACTCAAA 59.481 41.667 0.00 0.00 0.00 2.69
4626 5543 4.072131 GCATTACCAGAAACTCCACTCAA 58.928 43.478 0.00 0.00 0.00 3.02
4627 5544 3.072330 TGCATTACCAGAAACTCCACTCA 59.928 43.478 0.00 0.00 0.00 3.41
4628 5545 3.674997 TGCATTACCAGAAACTCCACTC 58.325 45.455 0.00 0.00 0.00 3.51
4629 5546 3.788227 TGCATTACCAGAAACTCCACT 57.212 42.857 0.00 0.00 0.00 4.00
4630 5547 4.009675 TCATGCATTACCAGAAACTCCAC 58.990 43.478 0.00 0.00 0.00 4.02
4631 5548 4.299586 TCATGCATTACCAGAAACTCCA 57.700 40.909 0.00 0.00 0.00 3.86
4632 5549 5.841957 ATTCATGCATTACCAGAAACTCC 57.158 39.130 0.00 0.00 0.00 3.85
4633 5550 8.792831 CATAATTCATGCATTACCAGAAACTC 57.207 34.615 0.00 0.00 0.00 3.01
4648 5565 8.697067 GCTAATTTTGTGCTAGCATAATTCATG 58.303 33.333 25.05 18.97 38.33 3.07
4649 5566 7.869429 GGCTAATTTTGTGCTAGCATAATTCAT 59.131 33.333 25.05 15.36 39.88 2.57
4650 5567 7.147932 TGGCTAATTTTGTGCTAGCATAATTCA 60.148 33.333 25.05 13.64 39.88 2.57
4651 5568 7.202526 TGGCTAATTTTGTGCTAGCATAATTC 58.797 34.615 25.05 15.89 39.88 2.17
4652 5569 7.111247 TGGCTAATTTTGTGCTAGCATAATT 57.889 32.000 25.05 25.23 39.88 1.40
4653 5570 6.713762 TGGCTAATTTTGTGCTAGCATAAT 57.286 33.333 25.05 18.68 39.88 1.28
4654 5571 6.522625 TTGGCTAATTTTGTGCTAGCATAA 57.477 33.333 22.51 21.94 39.88 1.90
4655 5572 6.522625 TTTGGCTAATTTTGTGCTAGCATA 57.477 33.333 22.51 16.45 39.88 3.14
4656 5573 5.404466 TTTGGCTAATTTTGTGCTAGCAT 57.596 34.783 22.51 6.05 39.88 3.79
4657 5574 4.862902 TTTGGCTAATTTTGTGCTAGCA 57.137 36.364 14.93 14.93 39.88 3.49
4658 5575 9.696917 ATTATATTTGGCTAATTTTGTGCTAGC 57.303 29.630 8.10 8.10 37.84 3.42
4688 5605 9.624373 AAGAAGTTAGATCATGCACTTTGATAT 57.376 29.630 1.30 1.61 34.03 1.63
4690 5607 7.934855 AAGAAGTTAGATCATGCACTTTGAT 57.065 32.000 0.88 0.88 36.54 2.57
4691 5608 8.097038 ACTAAGAAGTTAGATCATGCACTTTGA 58.903 33.333 0.00 0.00 38.39 2.69
4692 5609 8.261492 ACTAAGAAGTTAGATCATGCACTTTG 57.739 34.615 0.00 0.00 38.39 2.77
4693 5610 8.725148 CAACTAAGAAGTTAGATCATGCACTTT 58.275 33.333 0.00 0.00 44.28 2.66
4694 5611 7.880195 ACAACTAAGAAGTTAGATCATGCACTT 59.120 33.333 0.00 0.00 44.28 3.16
4695 5612 7.390027 ACAACTAAGAAGTTAGATCATGCACT 58.610 34.615 0.00 0.00 44.28 4.40
4696 5613 7.602517 ACAACTAAGAAGTTAGATCATGCAC 57.397 36.000 0.00 0.00 44.28 4.57
4697 5614 8.621532 AAACAACTAAGAAGTTAGATCATGCA 57.378 30.769 0.00 0.00 44.28 3.96
4708 5625 7.556635 AGGCTTTTGTCTAAACAACTAAGAAGT 59.443 33.333 6.83 0.00 44.90 3.01
4709 5626 7.931275 AGGCTTTTGTCTAAACAACTAAGAAG 58.069 34.615 6.83 2.62 44.90 2.85
4710 5627 7.875327 AGGCTTTTGTCTAAACAACTAAGAA 57.125 32.000 6.83 0.00 44.90 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.