Multiple sequence alignment - TraesCS1A01G168600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G168600 chr1A 100.000 4901 0 0 1 4901 301200910 301196010 0.000000e+00 9051.0
1 TraesCS1A01G168600 chr1A 85.321 109 15 1 295 403 449852278 449852171 1.440000e-20 111.0
2 TraesCS1A01G168600 chr1D 92.952 1433 42 21 746 2145 237806800 237805394 0.000000e+00 2032.0
3 TraesCS1A01G168600 chr1D 92.540 1126 44 23 3144 4258 237804442 237803346 0.000000e+00 1578.0
4 TraesCS1A01G168600 chr1D 93.008 944 41 11 2178 3098 237805395 237804454 0.000000e+00 1354.0
5 TraesCS1A01G168600 chr1D 82.996 494 42 25 4425 4901 237803247 237802779 4.570000e-110 409.0
6 TraesCS1A01G168600 chr1D 91.279 172 13 2 407 577 237807070 237806900 2.950000e-57 233.0
7 TraesCS1A01G168600 chr1D 94.318 88 4 1 4284 4371 237803349 237803263 3.080000e-27 134.0
8 TraesCS1A01G168600 chr1D 93.056 72 5 0 127 198 237807217 237807146 6.710000e-19 106.0
9 TraesCS1A01G168600 chr1D 95.082 61 0 1 586 643 237806858 237806798 5.220000e-15 93.5
10 TraesCS1A01G168600 chr1B 91.845 1447 48 28 747 2145 336646146 336647570 0.000000e+00 1954.0
11 TraesCS1A01G168600 chr1B 91.838 1409 73 14 3211 4597 336648510 336649898 0.000000e+00 1927.0
12 TraesCS1A01G168600 chr1B 86.044 953 85 22 2175 3092 336647566 336648505 0.000000e+00 979.0
13 TraesCS1A01G168600 chr1B 90.938 629 36 14 930 1541 434763927 434764551 0.000000e+00 826.0
14 TraesCS1A01G168600 chr1B 91.133 203 12 3 2 198 336645636 336645838 2.250000e-68 270.0
15 TraesCS1A01G168600 chr1B 91.558 154 10 2 425 577 336645911 336646062 4.970000e-50 209.0
16 TraesCS1A01G168600 chr1B 93.750 112 6 1 638 748 569516989 569516878 3.030000e-37 167.0
17 TraesCS1A01G168600 chr1B 90.164 122 11 1 626 747 97202852 97202972 1.830000e-34 158.0
18 TraesCS1A01G168600 chr1B 93.396 106 3 2 4631 4735 336649897 336649999 2.360000e-33 154.0
19 TraesCS1A01G168600 chr1B 97.059 34 0 1 4845 4877 336650227 336650260 6.850000e-04 56.5
20 TraesCS1A01G168600 chr5B 91.892 518 27 10 1031 1541 13200678 13200169 0.000000e+00 710.0
21 TraesCS1A01G168600 chr5B 84.010 394 49 8 2429 2816 342860356 342860741 2.790000e-97 366.0
22 TraesCS1A01G168600 chr5B 96.262 107 3 1 2699 2805 503730615 503730510 1.810000e-39 174.0
23 TraesCS1A01G168600 chr5B 94.495 109 6 0 641 749 167283532 167283424 8.440000e-38 169.0
24 TraesCS1A01G168600 chr6B 91.630 454 28 7 1103 1549 720461104 720460654 1.940000e-173 619.0
25 TraesCS1A01G168600 chr6B 94.495 109 6 0 639 747 114923266 114923158 8.440000e-38 169.0
26 TraesCS1A01G168600 chr6B 93.694 111 6 1 638 747 136452680 136452570 1.090000e-36 165.0
27 TraesCS1A01G168600 chr3D 85.738 610 51 16 2178 2764 20623345 20622749 3.240000e-171 612.0
28 TraesCS1A01G168600 chr3D 82.243 107 18 1 295 401 533715538 533715433 1.880000e-14 91.6
29 TraesCS1A01G168600 chrUn 84.906 318 24 7 2458 2764 70269693 70269389 2.870000e-77 300.0
30 TraesCS1A01G168600 chrUn 89.147 129 12 2 2688 2816 367340376 367340250 5.080000e-35 159.0
31 TraesCS1A01G168600 chrUn 79.381 97 19 1 293 389 8091506 8091601 3.170000e-07 67.6
32 TraesCS1A01G168600 chr2A 84.591 318 25 8 2458 2764 610249835 610250139 1.330000e-75 294.0
33 TraesCS1A01G168600 chr2A 87.097 93 11 1 295 387 672111199 672111290 2.410000e-18 104.0
34 TraesCS1A01G168600 chr5A 84.936 312 22 8 2464 2764 70977795 70977498 4.800000e-75 292.0
35 TraesCS1A01G168600 chr5A 83.974 312 26 7 2464 2764 291396566 291396864 1.340000e-70 278.0
36 TraesCS1A01G168600 chr5A 90.984 122 9 2 628 747 706334618 706334497 3.930000e-36 163.0
37 TraesCS1A01G168600 chr2B 94.495 109 6 0 641 749 464287692 464287800 8.440000e-38 169.0
38 TraesCS1A01G168600 chr7A 93.694 111 7 0 641 751 101275371 101275261 3.030000e-37 167.0
39 TraesCS1A01G168600 chr7A 84.348 115 17 1 290 404 83771392 83771505 1.440000e-20 111.0
40 TraesCS1A01G168600 chr7A 86.567 67 9 0 337 403 643405697 643405763 1.890000e-09 75.0
41 TraesCS1A01G168600 chr7A 100.000 37 0 0 109 145 403987521 403987485 8.800000e-08 69.4
42 TraesCS1A01G168600 chr7A 94.872 39 0 2 13 51 150236241 150236277 5.300000e-05 60.2
43 TraesCS1A01G168600 chr7D 92.920 113 7 1 637 749 458991282 458991171 3.930000e-36 163.0
44 TraesCS1A01G168600 chr7D 86.275 102 12 2 292 392 37102517 37102417 5.190000e-20 110.0
45 TraesCS1A01G168600 chr4A 83.784 111 17 1 293 403 596456229 596456120 2.410000e-18 104.0
46 TraesCS1A01G168600 chr4D 90.000 50 4 1 6 55 199021323 199021275 4.100000e-06 63.9
47 TraesCS1A01G168600 chr3B 92.857 42 2 1 6 46 32385014 32384973 5.300000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G168600 chr1A 301196010 301200910 4900 True 9051.000000 9051 100.000000 1 4901 1 chr1A.!!$R1 4900
1 TraesCS1A01G168600 chr1D 237802779 237807217 4438 True 742.437500 2032 91.903875 127 4901 8 chr1D.!!$R1 4774
2 TraesCS1A01G168600 chr1B 434763927 434764551 624 False 826.000000 826 90.938000 930 1541 1 chr1B.!!$F2 611
3 TraesCS1A01G168600 chr1B 336645636 336650260 4624 False 792.785714 1954 91.839000 2 4877 7 chr1B.!!$F3 4875
4 TraesCS1A01G168600 chr5B 13200169 13200678 509 True 710.000000 710 91.892000 1031 1541 1 chr5B.!!$R1 510
5 TraesCS1A01G168600 chr3D 20622749 20623345 596 True 612.000000 612 85.738000 2178 2764 1 chr3D.!!$R1 586

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
213 219 0.103937 TGCTTTTTCCTTTGTGCGGG 59.896 50.0 0.00 0.00 0.00 6.13 F
215 221 0.103937 CTTTTTCCTTTGTGCGGGCA 59.896 50.0 0.00 0.00 0.00 5.36 F
219 225 0.179097 TTCCTTTGTGCGGGCAAAAC 60.179 50.0 0.00 0.00 37.82 2.43 F
222 228 0.179113 CTTTGTGCGGGCAAAACTGT 60.179 50.0 0.00 0.00 37.82 3.55 F
223 229 0.247736 TTTGTGCGGGCAAAACTGTT 59.752 45.0 0.00 0.00 35.67 3.16 F
747 800 1.109609 ATTCCGAACGGAGGGAGTAC 58.890 55.0 15.34 0.00 46.06 2.73 F
2164 2290 0.029681 AGTGGGCCATCATCCCTACT 60.030 55.0 10.70 0.00 44.23 2.57 F
3126 3288 0.668401 GCCTGGCAACTTTGTCATGC 60.668 55.0 15.17 7.87 44.58 4.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2040 2166 1.068588 GTTCTTTTCTGGGTGCCCAAC 59.931 52.381 11.54 1.02 46.63 3.77 R
2108 2234 1.417517 ACGGAGCCATTATCATCAGCA 59.582 47.619 0.00 0.00 0.00 4.41 R
2148 2274 2.031495 ACTAGTAGGGATGATGGCCC 57.969 55.000 0.00 0.00 46.40 5.80 R
2149 2275 4.532521 ACAATACTAGTAGGGATGATGGCC 59.467 45.833 8.85 0.00 0.00 5.36 R
2150 2276 5.746990 ACAATACTAGTAGGGATGATGGC 57.253 43.478 8.85 0.00 0.00 4.40 R
2574 2718 0.944311 CCGAACCAGTGACAAGGACG 60.944 60.000 0.98 6.36 0.00 4.79 R
3825 3990 0.105246 AGGGGCTCTGAGGATGTAGG 60.105 60.000 6.83 0.00 0.00 3.18 R
4625 4819 0.109412 GGAAGGACCAGTCGTACGTG 60.109 60.000 16.05 7.04 38.79 4.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 9.529325 TGAAAATACCGTAGAACTATTGATCTG 57.471 33.333 0.00 0.00 0.00 2.90
57 58 6.902771 ATACCGTAGAACTATTGATCTGCT 57.097 37.500 0.00 0.00 0.00 4.24
59 60 4.402793 ACCGTAGAACTATTGATCTGCTGT 59.597 41.667 0.00 0.00 0.00 4.40
67 68 3.610040 ATTGATCTGCTGTCACGGTTA 57.390 42.857 0.00 0.00 0.00 2.85
186 192 4.697756 TGTGGTGGCTGCTACCGC 62.698 66.667 33.46 33.46 46.37 5.68
198 204 1.738099 CTACCGCTGCGAACTGCTT 60.738 57.895 25.45 0.91 46.63 3.91
199 205 1.291877 CTACCGCTGCGAACTGCTTT 61.292 55.000 25.45 0.00 46.63 3.51
200 206 0.882927 TACCGCTGCGAACTGCTTTT 60.883 50.000 25.45 0.00 46.63 2.27
201 207 1.008538 CCGCTGCGAACTGCTTTTT 60.009 52.632 25.45 0.00 46.63 1.94
202 208 0.998727 CCGCTGCGAACTGCTTTTTC 60.999 55.000 25.45 0.00 46.63 2.29
203 209 0.998727 CGCTGCGAACTGCTTTTTCC 60.999 55.000 18.66 0.00 46.63 3.13
204 210 0.312102 GCTGCGAACTGCTTTTTCCT 59.688 50.000 0.00 0.00 46.63 3.36
205 211 1.269257 GCTGCGAACTGCTTTTTCCTT 60.269 47.619 0.00 0.00 46.63 3.36
206 212 2.799562 GCTGCGAACTGCTTTTTCCTTT 60.800 45.455 0.00 0.00 46.63 3.11
207 213 2.791004 CTGCGAACTGCTTTTTCCTTTG 59.209 45.455 0.00 0.00 46.63 2.77
208 214 2.165437 TGCGAACTGCTTTTTCCTTTGT 59.835 40.909 0.00 0.00 46.63 2.83
209 215 2.535574 GCGAACTGCTTTTTCCTTTGTG 59.464 45.455 0.00 0.00 41.73 3.33
210 216 2.535574 CGAACTGCTTTTTCCTTTGTGC 59.464 45.455 0.00 0.00 0.00 4.57
211 217 2.208326 ACTGCTTTTTCCTTTGTGCG 57.792 45.000 0.00 0.00 0.00 5.34
212 218 1.202405 ACTGCTTTTTCCTTTGTGCGG 60.202 47.619 0.00 0.00 0.00 5.69
213 219 0.103937 TGCTTTTTCCTTTGTGCGGG 59.896 50.000 0.00 0.00 0.00 6.13
214 220 1.221466 GCTTTTTCCTTTGTGCGGGC 61.221 55.000 0.00 0.00 0.00 6.13
215 221 0.103937 CTTTTTCCTTTGTGCGGGCA 59.896 50.000 0.00 0.00 0.00 5.36
216 222 0.537188 TTTTTCCTTTGTGCGGGCAA 59.463 45.000 0.00 0.00 0.00 4.52
217 223 0.537188 TTTTCCTTTGTGCGGGCAAA 59.463 45.000 0.00 0.00 36.93 3.68
218 224 0.537188 TTTCCTTTGTGCGGGCAAAA 59.463 45.000 0.00 0.00 37.82 2.44
219 225 0.179097 TTCCTTTGTGCGGGCAAAAC 60.179 50.000 0.00 0.00 37.82 2.43
220 226 1.040339 TCCTTTGTGCGGGCAAAACT 61.040 50.000 0.00 0.00 37.82 2.66
221 227 0.875474 CCTTTGTGCGGGCAAAACTG 60.875 55.000 0.00 0.00 37.82 3.16
222 228 0.179113 CTTTGTGCGGGCAAAACTGT 60.179 50.000 0.00 0.00 37.82 3.55
223 229 0.247736 TTTGTGCGGGCAAAACTGTT 59.752 45.000 0.00 0.00 35.67 3.16
242 249 9.538508 AAACTGTTCTTCAAACGTACTATACTT 57.461 29.630 0.00 0.00 0.00 2.24
266 273 2.759191 AGTCCGCTACGTGTATCGATA 58.241 47.619 0.00 0.00 42.86 2.92
303 310 8.658840 ATGAAGAGTCTAATATTACTCCCTCC 57.341 38.462 12.73 3.72 42.56 4.30
304 311 6.715718 TGAAGAGTCTAATATTACTCCCTCCG 59.284 42.308 12.73 0.00 42.56 4.63
305 312 6.203526 AGAGTCTAATATTACTCCCTCCGT 57.796 41.667 12.73 0.00 42.56 4.69
306 313 6.612741 AGAGTCTAATATTACTCCCTCCGTT 58.387 40.000 12.73 0.00 42.56 4.44
307 314 6.716173 AGAGTCTAATATTACTCCCTCCGTTC 59.284 42.308 12.73 0.00 42.56 3.95
308 315 6.371278 AGTCTAATATTACTCCCTCCGTTCA 58.629 40.000 0.00 0.00 0.00 3.18
309 316 7.011382 AGTCTAATATTACTCCCTCCGTTCAT 58.989 38.462 0.00 0.00 0.00 2.57
310 317 7.509659 AGTCTAATATTACTCCCTCCGTTCATT 59.490 37.037 0.00 0.00 0.00 2.57
311 318 8.148999 GTCTAATATTACTCCCTCCGTTCATTT 58.851 37.037 0.00 0.00 0.00 2.32
312 319 8.711170 TCTAATATTACTCCCTCCGTTCATTTT 58.289 33.333 0.00 0.00 0.00 1.82
313 320 9.338622 CTAATATTACTCCCTCCGTTCATTTTT 57.661 33.333 0.00 0.00 0.00 1.94
314 321 5.897377 ATTACTCCCTCCGTTCATTTTTG 57.103 39.130 0.00 0.00 0.00 2.44
315 322 3.223674 ACTCCCTCCGTTCATTTTTGT 57.776 42.857 0.00 0.00 0.00 2.83
316 323 4.360951 ACTCCCTCCGTTCATTTTTGTA 57.639 40.909 0.00 0.00 0.00 2.41
317 324 4.721132 ACTCCCTCCGTTCATTTTTGTAA 58.279 39.130 0.00 0.00 0.00 2.41
318 325 4.760204 ACTCCCTCCGTTCATTTTTGTAAG 59.240 41.667 0.00 0.00 0.00 2.34
319 326 4.721132 TCCCTCCGTTCATTTTTGTAAGT 58.279 39.130 0.00 0.00 0.00 2.24
320 327 5.134661 TCCCTCCGTTCATTTTTGTAAGTT 58.865 37.500 0.00 0.00 0.00 2.66
321 328 6.297582 TCCCTCCGTTCATTTTTGTAAGTTA 58.702 36.000 0.00 0.00 0.00 2.24
322 329 6.943718 TCCCTCCGTTCATTTTTGTAAGTTAT 59.056 34.615 0.00 0.00 0.00 1.89
323 330 7.449086 TCCCTCCGTTCATTTTTGTAAGTTATT 59.551 33.333 0.00 0.00 0.00 1.40
324 331 8.085909 CCCTCCGTTCATTTTTGTAAGTTATTT 58.914 33.333 0.00 0.00 0.00 1.40
325 332 9.124807 CCTCCGTTCATTTTTGTAAGTTATTTC 57.875 33.333 0.00 0.00 0.00 2.17
326 333 9.672086 CTCCGTTCATTTTTGTAAGTTATTTCA 57.328 29.630 0.00 0.00 0.00 2.69
327 334 9.672086 TCCGTTCATTTTTGTAAGTTATTTCAG 57.328 29.630 0.00 0.00 0.00 3.02
328 335 9.672086 CCGTTCATTTTTGTAAGTTATTTCAGA 57.328 29.630 0.00 0.00 0.00 3.27
342 349 8.574196 AGTTATTTCAGACAATTTGAAAACGG 57.426 30.769 2.79 0.00 44.83 4.44
343 350 8.410141 AGTTATTTCAGACAATTTGAAAACGGA 58.590 29.630 2.79 0.00 44.83 4.69
344 351 8.476925 GTTATTTCAGACAATTTGAAAACGGAC 58.523 33.333 2.79 2.65 44.83 4.79
345 352 5.828299 TTCAGACAATTTGAAAACGGACT 57.172 34.783 2.79 0.00 31.98 3.85
346 353 5.168526 TCAGACAATTTGAAAACGGACTG 57.831 39.130 2.79 0.00 0.00 3.51
347 354 4.638421 TCAGACAATTTGAAAACGGACTGT 59.362 37.500 2.79 0.00 0.00 3.55
348 355 5.124776 TCAGACAATTTGAAAACGGACTGTT 59.875 36.000 2.79 0.00 44.59 3.16
359 366 3.255969 ACGGACTGTTTTACACACTGT 57.744 42.857 0.00 0.00 0.00 3.55
360 367 3.192466 ACGGACTGTTTTACACACTGTC 58.808 45.455 0.00 0.00 40.55 3.51
361 368 3.118884 ACGGACTGTTTTACACACTGTCT 60.119 43.478 9.17 0.00 40.88 3.41
362 369 3.245284 CGGACTGTTTTACACACTGTCTG 59.755 47.826 9.17 7.12 40.88 3.51
363 370 4.439057 GGACTGTTTTACACACTGTCTGA 58.561 43.478 9.17 0.00 40.88 3.27
364 371 4.873827 GGACTGTTTTACACACTGTCTGAA 59.126 41.667 9.17 0.00 40.88 3.02
365 372 5.353123 GGACTGTTTTACACACTGTCTGAAA 59.647 40.000 9.17 0.00 40.88 2.69
366 373 6.038271 GGACTGTTTTACACACTGTCTGAAAT 59.962 38.462 9.17 0.00 40.88 2.17
367 374 6.785191 ACTGTTTTACACACTGTCTGAAATG 58.215 36.000 0.00 0.00 0.00 2.32
368 375 6.374333 ACTGTTTTACACACTGTCTGAAATGT 59.626 34.615 0.00 0.00 0.00 2.71
369 376 7.094377 ACTGTTTTACACACTGTCTGAAATGTT 60.094 33.333 0.00 0.00 0.00 2.71
370 377 7.598278 TGTTTTACACACTGTCTGAAATGTTT 58.402 30.769 0.00 0.00 0.00 2.83
371 378 8.085296 TGTTTTACACACTGTCTGAAATGTTTT 58.915 29.630 0.00 0.00 0.00 2.43
372 379 8.921670 GTTTTACACACTGTCTGAAATGTTTTT 58.078 29.630 0.00 0.00 0.00 1.94
375 382 9.781834 TTACACACTGTCTGAAATGTTTTTAAG 57.218 29.630 0.00 0.00 0.00 1.85
376 383 7.257722 ACACACTGTCTGAAATGTTTTTAAGG 58.742 34.615 0.00 0.00 0.00 2.69
377 384 7.093945 ACACACTGTCTGAAATGTTTTTAAGGT 60.094 33.333 0.00 0.00 0.00 3.50
378 385 7.432252 CACACTGTCTGAAATGTTTTTAAGGTC 59.568 37.037 0.00 0.00 0.00 3.85
379 386 7.339466 ACACTGTCTGAAATGTTTTTAAGGTCT 59.661 33.333 0.00 0.00 0.00 3.85
380 387 8.190784 CACTGTCTGAAATGTTTTTAAGGTCTT 58.809 33.333 0.00 0.00 0.00 3.01
381 388 9.403583 ACTGTCTGAAATGTTTTTAAGGTCTTA 57.596 29.630 0.00 0.00 0.00 2.10
421 428 7.773690 AGGAAGTACGCCATCTTGTAAAATAAT 59.226 33.333 9.95 0.00 0.00 1.28
422 429 8.403236 GGAAGTACGCCATCTTGTAAAATAATT 58.597 33.333 3.29 0.00 0.00 1.40
423 430 9.221775 GAAGTACGCCATCTTGTAAAATAATTG 57.778 33.333 0.00 0.00 0.00 2.32
474 482 3.961480 TTGGAGATGATGTGTCGAAGT 57.039 42.857 0.00 0.00 0.00 3.01
535 543 3.073274 AGGGATGAACCGAAAGAAAGG 57.927 47.619 0.00 0.00 40.11 3.11
543 551 6.367686 TGAACCGAAAGAAAGGAAAACTAC 57.632 37.500 0.00 0.00 0.00 2.73
581 621 2.977169 CAACGCGTGAAGTTAAAATGGG 59.023 45.455 14.98 0.00 0.00 4.00
584 624 3.814283 ACGCGTGAAGTTAAAATGGGTAA 59.186 39.130 12.93 0.00 0.00 2.85
643 696 4.532521 ACTCCAGTGCCAAAGATTACTACT 59.467 41.667 0.00 0.00 0.00 2.57
644 697 5.086104 TCCAGTGCCAAAGATTACTACTC 57.914 43.478 0.00 0.00 0.00 2.59
645 698 4.081087 TCCAGTGCCAAAGATTACTACTCC 60.081 45.833 0.00 0.00 0.00 3.85
646 699 4.192317 CAGTGCCAAAGATTACTACTCCC 58.808 47.826 0.00 0.00 0.00 4.30
647 700 4.080863 CAGTGCCAAAGATTACTACTCCCT 60.081 45.833 0.00 0.00 0.00 4.20
648 701 4.536489 AGTGCCAAAGATTACTACTCCCTT 59.464 41.667 0.00 0.00 0.00 3.95
649 702 4.876679 GTGCCAAAGATTACTACTCCCTTC 59.123 45.833 0.00 0.00 0.00 3.46
650 703 4.120589 GCCAAAGATTACTACTCCCTTCG 58.879 47.826 0.00 0.00 0.00 3.79
651 704 4.382793 GCCAAAGATTACTACTCCCTTCGT 60.383 45.833 0.00 0.00 0.00 3.85
652 705 5.731591 CCAAAGATTACTACTCCCTTCGTT 58.268 41.667 0.00 0.00 0.00 3.85
653 706 5.811100 CCAAAGATTACTACTCCCTTCGTTC 59.189 44.000 0.00 0.00 0.00 3.95
654 707 4.897025 AGATTACTACTCCCTTCGTTCG 57.103 45.455 0.00 0.00 0.00 3.95
655 708 3.631227 AGATTACTACTCCCTTCGTTCGG 59.369 47.826 0.00 0.00 0.00 4.30
656 709 2.787473 TACTACTCCCTTCGTTCGGA 57.213 50.000 0.00 0.00 0.00 4.55
657 710 1.915141 ACTACTCCCTTCGTTCGGAA 58.085 50.000 0.00 0.00 0.00 4.30
658 711 2.454538 ACTACTCCCTTCGTTCGGAAT 58.545 47.619 0.00 0.00 33.26 3.01
659 712 2.830321 ACTACTCCCTTCGTTCGGAATT 59.170 45.455 0.00 0.00 33.26 2.17
660 713 4.019174 ACTACTCCCTTCGTTCGGAATTA 58.981 43.478 0.00 0.00 33.26 1.40
661 714 3.242549 ACTCCCTTCGTTCGGAATTAC 57.757 47.619 0.00 0.00 33.26 1.89
662 715 2.830321 ACTCCCTTCGTTCGGAATTACT 59.170 45.455 0.00 0.00 33.26 2.24
663 716 3.260128 ACTCCCTTCGTTCGGAATTACTT 59.740 43.478 0.00 0.00 33.26 2.24
664 717 3.592059 TCCCTTCGTTCGGAATTACTTG 58.408 45.455 0.00 0.00 33.26 3.16
665 718 3.007182 TCCCTTCGTTCGGAATTACTTGT 59.993 43.478 0.00 0.00 33.26 3.16
666 719 3.370061 CCCTTCGTTCGGAATTACTTGTC 59.630 47.826 0.00 0.00 33.26 3.18
667 720 4.243270 CCTTCGTTCGGAATTACTTGTCT 58.757 43.478 0.00 0.00 33.26 3.41
668 721 4.326548 CCTTCGTTCGGAATTACTTGTCTC 59.673 45.833 0.00 0.00 33.26 3.36
669 722 4.508461 TCGTTCGGAATTACTTGTCTCA 57.492 40.909 0.00 0.00 0.00 3.27
670 723 4.873817 TCGTTCGGAATTACTTGTCTCAA 58.126 39.130 0.00 0.00 0.00 3.02
671 724 5.291178 TCGTTCGGAATTACTTGTCTCAAA 58.709 37.500 0.00 0.00 0.00 2.69
672 725 5.754406 TCGTTCGGAATTACTTGTCTCAAAA 59.246 36.000 0.00 0.00 0.00 2.44
673 726 6.258287 TCGTTCGGAATTACTTGTCTCAAAAA 59.742 34.615 0.00 0.00 0.00 1.94
674 727 7.041644 TCGTTCGGAATTACTTGTCTCAAAAAT 60.042 33.333 0.00 0.00 0.00 1.82
675 728 7.059488 CGTTCGGAATTACTTGTCTCAAAAATG 59.941 37.037 0.00 0.00 0.00 2.32
676 729 6.908825 TCGGAATTACTTGTCTCAAAAATGG 58.091 36.000 0.00 0.00 0.00 3.16
677 730 6.712998 TCGGAATTACTTGTCTCAAAAATGGA 59.287 34.615 0.00 0.00 0.00 3.41
678 731 7.393234 TCGGAATTACTTGTCTCAAAAATGGAT 59.607 33.333 0.00 0.00 0.00 3.41
679 732 7.485913 CGGAATTACTTGTCTCAAAAATGGATG 59.514 37.037 0.00 0.00 0.00 3.51
680 733 8.306761 GGAATTACTTGTCTCAAAAATGGATGT 58.693 33.333 0.00 0.00 0.00 3.06
732 785 9.581099 ACATCCATTTTTACGACAAATAATTCC 57.419 29.630 0.00 0.00 0.00 3.01
733 786 8.742188 CATCCATTTTTACGACAAATAATTCCG 58.258 33.333 0.00 0.00 0.00 4.30
734 787 8.041829 TCCATTTTTACGACAAATAATTCCGA 57.958 30.769 0.00 0.00 0.00 4.55
735 788 8.512956 TCCATTTTTACGACAAATAATTCCGAA 58.487 29.630 0.00 0.00 0.00 4.30
736 789 8.580431 CCATTTTTACGACAAATAATTCCGAAC 58.420 33.333 0.00 0.00 0.00 3.95
737 790 7.763734 TTTTTACGACAAATAATTCCGAACG 57.236 32.000 0.00 0.00 0.00 3.95
738 791 5.453281 TTACGACAAATAATTCCGAACGG 57.547 39.130 6.94 6.94 0.00 4.44
739 792 3.587923 ACGACAAATAATTCCGAACGGA 58.412 40.909 12.04 12.04 43.52 4.69
740 793 3.615496 ACGACAAATAATTCCGAACGGAG 59.385 43.478 15.34 5.60 46.06 4.63
741 794 3.000925 CGACAAATAATTCCGAACGGAGG 59.999 47.826 15.34 4.52 46.06 4.30
742 795 3.275999 ACAAATAATTCCGAACGGAGGG 58.724 45.455 15.34 5.11 46.06 4.30
743 796 3.054948 ACAAATAATTCCGAACGGAGGGA 60.055 43.478 15.34 2.49 46.06 4.20
744 797 3.470645 AATAATTCCGAACGGAGGGAG 57.529 47.619 15.34 0.00 46.06 4.30
745 798 1.856629 TAATTCCGAACGGAGGGAGT 58.143 50.000 15.34 4.12 46.06 3.85
746 799 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
747 800 1.109609 ATTCCGAACGGAGGGAGTAC 58.890 55.000 15.34 0.00 46.06 2.73
982 1064 2.124529 GGGTTAGGAGCCAGCAGC 60.125 66.667 0.00 0.00 43.10 5.25
1067 1165 4.840005 GCAGCAGGCCTACGGGAC 62.840 72.222 3.98 0.00 42.21 4.46
1140 1238 1.526917 CGTGGGATTCATGCCCCTC 60.527 63.158 15.55 12.03 45.40 4.30
1507 1611 4.153330 TACGGCCCTCCCCTCCTC 62.153 72.222 0.00 0.00 0.00 3.71
1557 1664 7.315142 GCTTCAAATCAAATCAATGACCTGTA 58.685 34.615 0.00 0.00 30.82 2.74
1575 1682 5.594317 ACCTGTATAAATGTTGCTTGATCCC 59.406 40.000 0.00 0.00 0.00 3.85
1671 1778 2.824936 CCTCTGTTCTGCTCTCTTCTCA 59.175 50.000 0.00 0.00 0.00 3.27
1930 2038 9.196552 CCAGAAGGAAAACAACAAATCTAATTC 57.803 33.333 0.00 0.00 36.89 2.17
1970 2095 5.485209 TCTGAGGAGGGAAGAAACTAAAC 57.515 43.478 0.00 0.00 0.00 2.01
1977 2102 5.032327 AGGGAAGAAACTAAACGACAGTT 57.968 39.130 0.00 0.00 43.50 3.16
2040 2166 3.622514 AGGAGAACCTAGCTGCCG 58.377 61.111 0.00 0.00 45.83 5.69
2065 2191 2.627699 GGCACCCAGAAAAGAACATTCA 59.372 45.455 0.00 0.00 0.00 2.57
2096 2222 6.499106 TCTCTATATTCAGATTGGTTGGCA 57.501 37.500 0.00 0.00 0.00 4.92
2103 2229 4.574674 TCAGATTGGTTGGCATCTAGTT 57.425 40.909 0.00 0.00 0.00 2.24
2108 2234 4.584638 TTGGTTGGCATCTAGTTACCAT 57.415 40.909 5.84 0.00 35.74 3.55
2127 2253 2.174363 TGCTGATGATAATGGCTCCG 57.826 50.000 0.00 0.00 0.00 4.63
2128 2254 1.417517 TGCTGATGATAATGGCTCCGT 59.582 47.619 0.00 0.00 0.00 4.69
2143 2269 3.430236 GGCTCCGTTATTTTGGGAATTGG 60.430 47.826 0.00 0.00 0.00 3.16
2144 2270 3.445805 GCTCCGTTATTTTGGGAATTGGA 59.554 43.478 0.00 0.00 0.00 3.53
2145 2271 4.081917 GCTCCGTTATTTTGGGAATTGGAA 60.082 41.667 0.00 0.00 0.00 3.53
2146 2272 5.650543 CTCCGTTATTTTGGGAATTGGAAG 58.349 41.667 0.00 0.00 0.00 3.46
2147 2273 5.081032 TCCGTTATTTTGGGAATTGGAAGT 58.919 37.500 0.00 0.00 0.00 3.01
2148 2274 5.047660 TCCGTTATTTTGGGAATTGGAAGTG 60.048 40.000 0.00 0.00 0.00 3.16
2149 2275 5.167845 CGTTATTTTGGGAATTGGAAGTGG 58.832 41.667 0.00 0.00 0.00 4.00
2150 2276 5.487433 GTTATTTTGGGAATTGGAAGTGGG 58.513 41.667 0.00 0.00 0.00 4.61
2151 2277 1.347062 TTTGGGAATTGGAAGTGGGC 58.653 50.000 0.00 0.00 0.00 5.36
2152 2278 0.544120 TTGGGAATTGGAAGTGGGCC 60.544 55.000 0.00 0.00 0.00 5.80
2153 2279 1.078347 GGGAATTGGAAGTGGGCCA 59.922 57.895 0.00 0.00 0.00 5.36
2154 2280 0.325577 GGGAATTGGAAGTGGGCCAT 60.326 55.000 10.70 0.00 34.90 4.40
2155 2281 1.114627 GGAATTGGAAGTGGGCCATC 58.885 55.000 10.70 3.50 34.90 3.51
2156 2282 1.619432 GGAATTGGAAGTGGGCCATCA 60.619 52.381 10.70 3.44 34.90 3.07
2157 2283 2.391678 GAATTGGAAGTGGGCCATCAT 58.608 47.619 10.70 0.00 34.90 2.45
2158 2284 2.077687 ATTGGAAGTGGGCCATCATC 57.922 50.000 10.70 8.61 34.90 2.92
2159 2285 0.033208 TTGGAAGTGGGCCATCATCC 60.033 55.000 21.64 21.64 34.90 3.51
2160 2286 1.152673 GGAAGTGGGCCATCATCCC 60.153 63.158 10.70 3.44 44.17 3.85
2161 2287 1.649271 GGAAGTGGGCCATCATCCCT 61.649 60.000 10.70 0.00 44.23 4.20
2162 2288 1.140312 GAAGTGGGCCATCATCCCTA 58.860 55.000 10.70 0.00 44.23 3.53
2163 2289 0.846693 AAGTGGGCCATCATCCCTAC 59.153 55.000 10.70 0.00 44.23 3.18
2164 2290 0.029681 AGTGGGCCATCATCCCTACT 60.030 55.000 10.70 0.00 44.23 2.57
2165 2291 1.223077 AGTGGGCCATCATCCCTACTA 59.777 52.381 10.70 0.00 44.23 1.82
2166 2292 1.625818 GTGGGCCATCATCCCTACTAG 59.374 57.143 10.70 0.00 44.23 2.57
2167 2293 1.223077 TGGGCCATCATCCCTACTAGT 59.777 52.381 0.00 0.00 44.23 2.57
2168 2294 2.453212 TGGGCCATCATCCCTACTAGTA 59.547 50.000 0.00 1.89 44.23 1.82
2169 2295 3.079072 TGGGCCATCATCCCTACTAGTAT 59.921 47.826 0.00 0.00 44.23 2.12
2170 2296 4.104831 GGGCCATCATCCCTACTAGTATT 58.895 47.826 4.39 0.00 40.66 1.89
2171 2297 4.080863 GGGCCATCATCCCTACTAGTATTG 60.081 50.000 4.39 0.00 40.66 1.90
2172 2298 4.532521 GGCCATCATCCCTACTAGTATTGT 59.467 45.833 2.33 0.00 0.00 2.71
2173 2299 5.013183 GGCCATCATCCCTACTAGTATTGTT 59.987 44.000 2.33 0.00 0.00 2.83
2174 2300 6.465894 GGCCATCATCCCTACTAGTATTGTTT 60.466 42.308 2.33 0.00 0.00 2.83
2175 2301 6.998673 GCCATCATCCCTACTAGTATTGTTTT 59.001 38.462 2.33 0.00 0.00 2.43
2176 2302 7.502561 GCCATCATCCCTACTAGTATTGTTTTT 59.497 37.037 2.33 0.00 0.00 1.94
2209 2335 8.961294 TGTTTTCAACTTCATCATTTCCATTT 57.039 26.923 0.00 0.00 0.00 2.32
2218 2344 9.685276 ACTTCATCATTTCCATTTGTAGTCATA 57.315 29.630 0.00 0.00 0.00 2.15
2234 2360 9.914131 TTGTAGTCATATAGATGTTCATACTGC 57.086 33.333 0.00 0.00 34.41 4.40
2240 2366 9.077885 TCATATAGATGTTCATACTGCAGTACA 57.922 33.333 28.28 23.51 34.41 2.90
2243 2369 5.284864 AGATGTTCATACTGCAGTACATCG 58.715 41.667 33.77 22.46 36.36 3.84
2244 2370 3.780902 TGTTCATACTGCAGTACATCGG 58.219 45.455 28.28 15.04 32.72 4.18
2249 2381 5.242434 TCATACTGCAGTACATCGGTTTTT 58.758 37.500 28.28 6.10 32.72 1.94
2253 2385 4.689345 ACTGCAGTACATCGGTTTTTCTAC 59.311 41.667 20.16 0.00 0.00 2.59
2258 2390 6.472808 GCAGTACATCGGTTTTTCTACTCTAG 59.527 42.308 0.00 0.00 0.00 2.43
2267 2399 9.688592 TCGGTTTTTCTACTCTAGAGTTTAAAG 57.311 33.333 29.57 20.16 42.54 1.85
2268 2400 8.923683 CGGTTTTTCTACTCTAGAGTTTAAAGG 58.076 37.037 29.57 15.03 42.54 3.11
2302 2434 3.689347 AGCATCATTCCACTTGCTGTTA 58.311 40.909 0.00 0.00 43.44 2.41
2305 2437 4.337555 GCATCATTCCACTTGCTGTTATCT 59.662 41.667 0.00 0.00 32.41 1.98
2322 2454 9.920133 GCTGTTATCTGATCTACAATTAGATGA 57.080 33.333 0.00 0.00 43.93 2.92
2368 2500 4.926832 TGAATCTGCTGTTTGAATTGCATG 59.073 37.500 0.00 0.00 34.79 4.06
2390 2523 7.470079 CATGGTAGAAGATTCAAATCACAGTG 58.530 38.462 5.59 0.00 37.89 3.66
2437 2575 5.279456 GGGTTGATTTACCTTTGAGCATGTT 60.279 40.000 0.00 0.00 38.30 2.71
2624 2768 7.916914 TGTTAGGGTGAAAGCTATTTACTTC 57.083 36.000 0.00 0.00 0.00 3.01
2628 2772 6.122964 AGGGTGAAAGCTATTTACTTCCATC 58.877 40.000 0.00 0.00 0.00 3.51
2633 2777 9.346725 GTGAAAGCTATTTACTTCCATCTTTTG 57.653 33.333 0.00 0.00 0.00 2.44
2634 2778 9.077885 TGAAAGCTATTTACTTCCATCTTTTGT 57.922 29.630 0.00 0.00 0.00 2.83
2674 2819 5.492895 TCAATCCGTTACCTGCATCTTAAA 58.507 37.500 0.00 0.00 0.00 1.52
2675 2820 5.941058 TCAATCCGTTACCTGCATCTTAAAA 59.059 36.000 0.00 0.00 0.00 1.52
2676 2821 5.813080 ATCCGTTACCTGCATCTTAAAAC 57.187 39.130 0.00 0.00 0.00 2.43
2677 2822 4.643463 TCCGTTACCTGCATCTTAAAACA 58.357 39.130 0.00 0.00 0.00 2.83
2678 2823 4.693566 TCCGTTACCTGCATCTTAAAACAG 59.306 41.667 0.00 0.00 0.00 3.16
2679 2824 4.454504 CCGTTACCTGCATCTTAAAACAGT 59.545 41.667 0.00 0.00 0.00 3.55
2680 2825 5.382303 CGTTACCTGCATCTTAAAACAGTG 58.618 41.667 0.00 0.00 0.00 3.66
2681 2826 5.049680 CGTTACCTGCATCTTAAAACAGTGT 60.050 40.000 0.00 0.00 0.00 3.55
2682 2827 6.146510 CGTTACCTGCATCTTAAAACAGTGTA 59.853 38.462 0.00 0.00 0.00 2.90
2857 3010 3.519510 CTCTTATCTTGGTGACCTTCCCA 59.480 47.826 2.11 0.00 0.00 4.37
2866 3024 2.325484 GTGACCTTCCCACCCAAAAAT 58.675 47.619 0.00 0.00 0.00 1.82
2938 3096 4.038042 TCTGGTTCTGATTAGGTCATAGCG 59.962 45.833 0.00 0.00 35.97 4.26
2943 3101 3.004839 TCTGATTAGGTCATAGCGCTCAC 59.995 47.826 16.34 9.60 35.97 3.51
2983 3142 9.182933 GGTACGATTTATTGTTTGTTTTTGCTA 57.817 29.630 0.00 0.00 0.00 3.49
3010 3169 1.972075 TCCGTGGTCACCATAACTTGA 59.028 47.619 0.00 0.00 35.28 3.02
3043 3204 4.645921 GTTGTGGCTGTTGGCGGC 62.646 66.667 0.00 0.00 45.95 6.53
3098 3260 8.976471 CATGATTTAGTCTTGTAGCTGTATCTG 58.024 37.037 0.00 0.00 0.00 2.90
3099 3261 6.980978 TGATTTAGTCTTGTAGCTGTATCTGC 59.019 38.462 0.00 0.00 0.00 4.26
3100 3262 6.531503 TTTAGTCTTGTAGCTGTATCTGCT 57.468 37.500 0.00 6.41 41.32 4.24
3101 3263 4.383850 AGTCTTGTAGCTGTATCTGCTG 57.616 45.455 0.00 0.00 38.96 4.41
3104 3266 5.419155 AGTCTTGTAGCTGTATCTGCTGTTA 59.581 40.000 0.00 0.00 38.96 2.41
3120 3282 4.361451 CTGTTATAGCCTGGCAACTTTG 57.639 45.455 22.65 7.60 37.61 2.77
3121 3283 3.758554 CTGTTATAGCCTGGCAACTTTGT 59.241 43.478 22.65 0.00 37.61 2.83
3122 3284 3.756434 TGTTATAGCCTGGCAACTTTGTC 59.244 43.478 22.65 4.04 37.61 3.18
3123 3285 2.584835 ATAGCCTGGCAACTTTGTCA 57.415 45.000 22.65 0.00 41.08 3.58
3124 3286 2.584835 TAGCCTGGCAACTTTGTCAT 57.415 45.000 22.65 0.00 42.60 3.06
3125 3287 0.963962 AGCCTGGCAACTTTGTCATG 59.036 50.000 22.65 0.00 42.60 3.07
3126 3288 0.668401 GCCTGGCAACTTTGTCATGC 60.668 55.000 15.17 7.87 44.58 4.06
3127 3289 0.675083 CCTGGCAACTTTGTCATGCA 59.325 50.000 0.00 0.00 42.60 3.96
3128 3290 1.068895 CCTGGCAACTTTGTCATGCAA 59.931 47.619 0.00 0.00 42.60 4.08
3129 3291 2.129607 CTGGCAACTTTGTCATGCAAC 58.870 47.619 0.00 0.00 42.60 4.17
3130 3292 1.755959 TGGCAACTTTGTCATGCAACT 59.244 42.857 0.00 0.00 37.97 3.16
3131 3293 2.223782 TGGCAACTTTGTCATGCAACTC 60.224 45.455 0.00 0.00 37.97 3.01
3132 3294 2.035066 GGCAACTTTGTCATGCAACTCT 59.965 45.455 0.00 0.00 41.80 3.24
3133 3295 3.491447 GGCAACTTTGTCATGCAACTCTT 60.491 43.478 0.00 0.00 41.80 2.85
3134 3296 3.732721 GCAACTTTGTCATGCAACTCTTC 59.267 43.478 0.00 0.00 39.81 2.87
3135 3297 4.734402 GCAACTTTGTCATGCAACTCTTCA 60.734 41.667 0.00 0.00 39.81 3.02
3136 3298 5.342433 CAACTTTGTCATGCAACTCTTCAA 58.658 37.500 0.00 0.00 36.72 2.69
3137 3299 4.925068 ACTTTGTCATGCAACTCTTCAAC 58.075 39.130 0.00 0.00 36.72 3.18
3138 3300 4.398988 ACTTTGTCATGCAACTCTTCAACA 59.601 37.500 0.00 0.00 36.72 3.33
3139 3301 5.068198 ACTTTGTCATGCAACTCTTCAACAT 59.932 36.000 0.00 0.00 36.72 2.71
3140 3302 4.492791 TGTCATGCAACTCTTCAACATG 57.507 40.909 0.00 0.00 39.53 3.21
3141 3303 3.253921 TGTCATGCAACTCTTCAACATGG 59.746 43.478 0.00 0.00 38.86 3.66
3142 3304 2.821378 TCATGCAACTCTTCAACATGGG 59.179 45.455 0.00 0.00 38.86 4.00
3160 3322 0.882927 GGTGTTAAGGCGTGCAGTCA 60.883 55.000 0.00 0.00 0.00 3.41
3172 3336 5.820423 AGGCGTGCAGTCAATATGTTTAATA 59.180 36.000 0.00 0.00 0.00 0.98
3240 3404 7.550906 GGTATTTGAATCTATGTGGAGGATAGC 59.449 40.741 0.00 0.00 0.00 2.97
3242 3406 5.735285 TGAATCTATGTGGAGGATAGCAG 57.265 43.478 0.00 0.00 0.00 4.24
3243 3407 5.397360 TGAATCTATGTGGAGGATAGCAGA 58.603 41.667 0.00 0.00 0.00 4.26
3275 3439 6.419980 TTGCACTTGTTTTGAAAATCCAAG 57.580 33.333 15.31 15.31 0.00 3.61
3277 3441 4.332268 GCACTTGTTTTGAAAATCCAAGCA 59.668 37.500 16.29 0.00 0.00 3.91
3301 3465 7.061094 GCATGTACAGTTTGAGCTAAATGTTTC 59.939 37.037 7.55 3.63 0.00 2.78
3390 3554 9.636879 AATTTGGAAATGTTTTTGTCCTTTTTG 57.363 25.926 0.00 0.00 0.00 2.44
3426 3591 2.297033 TGTGAAAGCAATTGAGAAGGCC 59.703 45.455 10.34 0.00 0.00 5.19
3435 3600 3.962718 CAATTGAGAAGGCCATACCCATT 59.037 43.478 5.01 0.00 40.58 3.16
3468 3633 1.003580 TCTGTTGCTGAGAATCACCCC 59.996 52.381 0.00 0.00 42.56 4.95
3648 3813 0.700564 TGGAGCCCATCTGCTTCTTT 59.299 50.000 0.00 0.00 42.95 2.52
3657 3822 1.865865 TCTGCTTCTTTGTGACGTCC 58.134 50.000 14.12 5.06 0.00 4.79
3876 4041 1.136329 AGGAGAGCCACCACCATTGT 61.136 55.000 0.00 0.00 36.29 2.71
3878 4043 0.326264 GAGAGCCACCACCATTGTCT 59.674 55.000 0.00 0.00 0.00 3.41
3895 4060 2.880268 TGTCTTTCTCACTGCCATTGTG 59.120 45.455 0.00 0.00 36.82 3.33
4013 4178 6.700520 TCATTGACGAGATCAGATTCAGATTG 59.299 38.462 0.00 0.00 38.99 2.67
4015 4180 5.970592 TGACGAGATCAGATTCAGATTGTT 58.029 37.500 0.00 0.00 31.91 2.83
4016 4181 6.038985 TGACGAGATCAGATTCAGATTGTTC 58.961 40.000 0.00 0.00 31.91 3.18
4017 4182 5.039984 ACGAGATCAGATTCAGATTGTTCG 58.960 41.667 14.20 14.20 33.92 3.95
4018 4183 5.039984 CGAGATCAGATTCAGATTGTTCGT 58.960 41.667 0.00 0.00 0.00 3.85
4020 4185 6.507614 CGAGATCAGATTCAGATTGTTCGTTG 60.508 42.308 0.00 0.00 0.00 4.10
4021 4186 6.169094 AGATCAGATTCAGATTGTTCGTTGT 58.831 36.000 0.00 0.00 0.00 3.32
4070 4243 2.067013 CATGTGAGCTGTGACTGTGAG 58.933 52.381 0.00 0.00 0.00 3.51
4168 4346 7.552458 AAAAATTGATCACAAACCAAGGAAC 57.448 32.000 0.00 0.00 39.54 3.62
4182 4360 3.467776 GGAACTGTCATCCAGCTCC 57.532 57.895 0.00 0.00 46.35 4.70
4184 4362 2.021355 GAACTGTCATCCAGCTCCTG 57.979 55.000 0.00 0.00 45.68 3.86
4243 4421 6.703607 GGATCTTCAGCGATTATTCTCTTCAA 59.296 38.462 0.00 0.00 0.00 2.69
4244 4422 7.095691 GGATCTTCAGCGATTATTCTCTTCAAG 60.096 40.741 0.00 0.00 0.00 3.02
4265 4443 2.965671 AGGCAGGGTCATAATCCATG 57.034 50.000 0.00 0.00 39.38 3.66
4353 4533 6.738832 TGAAGAATCAAGAGCATCAGAAAG 57.261 37.500 0.00 0.00 37.82 2.62
4407 4587 0.618458 AGGGCCGTCAGCATTTAAGA 59.382 50.000 0.00 0.00 46.50 2.10
4509 4703 5.636543 GGTTTCTTTCATTTGATGCCTTCTG 59.363 40.000 0.00 0.00 0.00 3.02
4570 4764 3.547746 AGTTTTTAACTCGTCCCAGCAA 58.452 40.909 0.00 0.00 37.02 3.91
4605 4799 4.624364 CAGCGGCACCACACAGGA 62.624 66.667 1.45 0.00 41.22 3.86
4606 4800 4.626081 AGCGGCACCACACAGGAC 62.626 66.667 1.45 0.00 41.22 3.85
4608 4802 4.248842 CGGCACCACACAGGACCA 62.249 66.667 0.00 0.00 41.22 4.02
4609 4803 2.281761 GGCACCACACAGGACCAG 60.282 66.667 0.00 0.00 41.22 4.00
4610 4804 2.281761 GCACCACACAGGACCAGG 60.282 66.667 0.00 0.00 41.22 4.45
4611 4805 2.431683 CACCACACAGGACCAGGG 59.568 66.667 0.00 0.00 41.22 4.45
4612 4806 2.039831 ACCACACAGGACCAGGGT 60.040 61.111 0.00 0.00 41.22 4.34
4613 4807 1.125093 CACCACACAGGACCAGGGTA 61.125 60.000 0.00 0.00 41.22 3.69
4614 4808 1.125711 ACCACACAGGACCAGGGTAC 61.126 60.000 0.00 0.00 41.22 3.34
4615 4809 1.125093 CCACACAGGACCAGGGTACA 61.125 60.000 3.02 0.00 41.22 2.90
4616 4810 0.321671 CACACAGGACCAGGGTACAG 59.678 60.000 3.02 0.00 0.00 2.74
4617 4811 1.296715 CACAGGACCAGGGTACAGC 59.703 63.158 3.02 0.00 0.00 4.40
4618 4812 2.283529 ACAGGACCAGGGTACAGCG 61.284 63.158 3.02 0.00 0.00 5.18
4619 4813 1.982395 CAGGACCAGGGTACAGCGA 60.982 63.158 3.02 0.00 0.00 4.93
4620 4814 1.229082 AGGACCAGGGTACAGCGAA 60.229 57.895 3.02 0.00 0.00 4.70
4621 4815 1.079336 GGACCAGGGTACAGCGAAC 60.079 63.158 0.00 0.00 0.00 3.95
4622 4816 1.079336 GACCAGGGTACAGCGAACC 60.079 63.158 0.00 0.00 36.19 3.62
4623 4817 1.823169 GACCAGGGTACAGCGAACCA 61.823 60.000 7.35 0.00 38.87 3.67
4624 4818 1.079127 CCAGGGTACAGCGAACCAG 60.079 63.158 7.35 0.36 38.87 4.00
4625 4819 1.741770 CAGGGTACAGCGAACCAGC 60.742 63.158 7.35 0.00 38.87 4.85
4626 4820 2.214216 AGGGTACAGCGAACCAGCA 61.214 57.895 7.35 0.00 38.87 4.41
4627 4821 2.033194 GGGTACAGCGAACCAGCAC 61.033 63.158 7.35 0.00 38.87 4.40
4628 4822 2.380410 GGTACAGCGAACCAGCACG 61.380 63.158 0.00 0.00 40.15 5.34
4629 4823 1.663702 GTACAGCGAACCAGCACGT 60.664 57.895 0.00 0.00 40.15 4.49
4642 4836 1.177256 AGCACGTACGACTGGTCCTT 61.177 55.000 24.41 0.00 0.00 3.36
4664 4858 0.168128 GTGGTTAACTCGCCATGCAC 59.832 55.000 5.42 0.00 37.09 4.57
4665 4859 0.250510 TGGTTAACTCGCCATGCACA 60.251 50.000 5.42 0.00 0.00 4.57
4666 4860 1.094785 GGTTAACTCGCCATGCACAT 58.905 50.000 5.42 0.00 0.00 3.21
4735 4960 4.532276 CAAATTTTACACGCACAGCTGTA 58.468 39.130 21.20 0.00 0.00 2.74
4736 4961 3.806316 ATTTTACACGCACAGCTGTAC 57.194 42.857 21.20 13.80 0.00 2.90
4737 4962 1.504359 TTTACACGCACAGCTGTACC 58.496 50.000 21.20 12.66 0.00 3.34
4738 4963 0.389757 TTACACGCACAGCTGTACCA 59.610 50.000 21.20 0.00 0.00 3.25
4739 4964 0.038618 TACACGCACAGCTGTACCAG 60.039 55.000 21.20 13.17 34.12 4.00
4740 4965 1.300931 CACGCACAGCTGTACCAGT 60.301 57.895 21.20 13.83 33.43 4.00
4741 4966 1.300931 ACGCACAGCTGTACCAGTG 60.301 57.895 21.20 16.01 33.43 3.66
4742 4967 2.029288 CGCACAGCTGTACCAGTGG 61.029 63.158 21.20 7.91 33.43 4.00
4743 4968 2.328099 GCACAGCTGTACCAGTGGC 61.328 63.158 21.20 13.27 33.43 5.01
4744 4969 1.071299 CACAGCTGTACCAGTGGCA 59.929 57.895 21.20 0.00 33.43 4.92
4749 4974 2.474561 CTGTACCAGTGGCAGCATG 58.525 57.895 9.78 0.00 40.87 4.06
4750 4975 1.002257 TGTACCAGTGGCAGCATGG 60.002 57.895 9.78 10.85 40.10 3.66
4751 4976 1.299648 GTACCAGTGGCAGCATGGA 59.700 57.895 17.58 2.12 37.54 3.41
4752 4977 1.026718 GTACCAGTGGCAGCATGGAC 61.027 60.000 17.58 9.18 37.54 4.02
4753 4978 2.196997 TACCAGTGGCAGCATGGACC 62.197 60.000 17.58 0.00 37.54 4.46
4755 4980 4.415150 AGTGGCAGCATGGACCCG 62.415 66.667 0.00 0.00 35.86 5.28
4756 4981 4.722700 GTGGCAGCATGGACCCGT 62.723 66.667 0.00 0.00 35.86 5.28
4760 4985 2.690778 GCAGCATGGACCCGTCAAC 61.691 63.158 0.00 0.00 35.86 3.18
4761 4986 2.047274 AGCATGGACCCGTCAACG 60.047 61.111 0.00 0.00 39.44 4.10
4762 4987 2.047655 GCATGGACCCGTCAACGA 60.048 61.111 3.71 0.00 43.02 3.85
4766 4991 0.321298 ATGGACCCGTCAACGAAAGG 60.321 55.000 3.71 0.00 43.02 3.11
4798 5023 2.208431 GCACCTGTAGCAATCTAGCAG 58.792 52.381 0.00 0.00 36.85 4.24
4834 5204 5.674148 CGAACGAACAATCATAAAGCTGATG 59.326 40.000 2.99 2.99 36.03 3.07
4846 5216 4.749323 CTGATGGCCAGCTTTCCA 57.251 55.556 23.69 6.19 35.89 3.53
4847 5217 2.490165 CTGATGGCCAGCTTTCCAG 58.510 57.895 23.69 6.73 35.89 3.86
4881 5251 0.866906 ACAGCGAACGAACGAACGAA 60.867 50.000 16.66 0.00 37.03 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 5.457148 GTGACAGCAGATCAATAGTTCTACG 59.543 44.000 0.00 0.00 0.00 3.51
43 44 3.055819 ACCGTGACAGCAGATCAATAGTT 60.056 43.478 0.00 0.00 0.00 2.24
74 75 6.562518 ACTAAACTCTATCGAGCAGTTTACC 58.437 40.000 16.61 0.00 40.18 2.85
75 76 8.373992 CAAACTAAACTCTATCGAGCAGTTTAC 58.626 37.037 16.61 0.00 40.87 2.01
151 157 3.699538 CCACAGGCGGCTATGAGTATATA 59.300 47.826 20.12 0.00 0.00 0.86
152 158 2.497675 CCACAGGCGGCTATGAGTATAT 59.502 50.000 20.12 0.00 0.00 0.86
186 192 2.781945 AAGGAAAAAGCAGTTCGCAG 57.218 45.000 0.00 0.00 46.13 5.18
198 204 0.537188 TTTGCCCGCACAAAGGAAAA 59.463 45.000 0.00 0.00 34.68 2.29
199 205 0.537188 TTTTGCCCGCACAAAGGAAA 59.463 45.000 0.00 0.00 40.43 3.13
200 206 0.179097 GTTTTGCCCGCACAAAGGAA 60.179 50.000 0.00 0.00 40.43 3.36
201 207 1.040339 AGTTTTGCCCGCACAAAGGA 61.040 50.000 0.00 0.00 40.43 3.36
202 208 0.875474 CAGTTTTGCCCGCACAAAGG 60.875 55.000 0.00 0.00 40.43 3.11
203 209 0.179113 ACAGTTTTGCCCGCACAAAG 60.179 50.000 0.00 0.00 40.43 2.77
204 210 0.247736 AACAGTTTTGCCCGCACAAA 59.752 45.000 0.00 0.00 37.74 2.83
205 211 0.179124 GAACAGTTTTGCCCGCACAA 60.179 50.000 0.00 0.00 0.00 3.33
206 212 1.034838 AGAACAGTTTTGCCCGCACA 61.035 50.000 0.00 0.00 0.00 4.57
207 213 0.102300 AAGAACAGTTTTGCCCGCAC 59.898 50.000 0.00 0.00 0.00 5.34
208 214 0.383949 GAAGAACAGTTTTGCCCGCA 59.616 50.000 0.00 0.00 0.00 5.69
209 215 0.383949 TGAAGAACAGTTTTGCCCGC 59.616 50.000 0.00 0.00 0.00 6.13
210 216 2.857748 GTTTGAAGAACAGTTTTGCCCG 59.142 45.455 0.00 0.00 0.00 6.13
211 217 2.857748 CGTTTGAAGAACAGTTTTGCCC 59.142 45.455 0.00 0.00 0.00 5.36
212 218 3.507786 ACGTTTGAAGAACAGTTTTGCC 58.492 40.909 0.00 0.00 0.00 4.52
213 219 5.329493 AGTACGTTTGAAGAACAGTTTTGC 58.671 37.500 0.00 0.00 0.00 3.68
214 220 9.577003 GTATAGTACGTTTGAAGAACAGTTTTG 57.423 33.333 0.00 0.00 0.00 2.44
215 221 9.538508 AGTATAGTACGTTTGAAGAACAGTTTT 57.461 29.630 0.00 0.00 0.00 2.43
216 222 9.538508 AAGTATAGTACGTTTGAAGAACAGTTT 57.461 29.630 0.00 0.00 0.00 2.66
217 223 8.975439 CAAGTATAGTACGTTTGAAGAACAGTT 58.025 33.333 0.00 0.00 0.00 3.16
218 224 8.139989 ACAAGTATAGTACGTTTGAAGAACAGT 58.860 33.333 0.00 0.00 0.00 3.55
219 225 8.516811 ACAAGTATAGTACGTTTGAAGAACAG 57.483 34.615 0.00 0.00 0.00 3.16
220 226 8.876275 AACAAGTATAGTACGTTTGAAGAACA 57.124 30.769 0.00 0.00 0.00 3.18
223 229 9.831737 GACTAACAAGTATAGTACGTTTGAAGA 57.168 33.333 0.00 0.00 33.85 2.87
242 249 2.030823 CGATACACGTAGCGGACTAACA 59.969 50.000 6.95 0.00 40.78 2.41
294 301 4.360951 ACAAAAATGAACGGAGGGAGTA 57.639 40.909 0.00 0.00 0.00 2.59
296 303 4.760204 ACTTACAAAAATGAACGGAGGGAG 59.240 41.667 0.00 0.00 0.00 4.30
297 304 4.721132 ACTTACAAAAATGAACGGAGGGA 58.279 39.130 0.00 0.00 0.00 4.20
298 305 5.447624 AACTTACAAAAATGAACGGAGGG 57.552 39.130 0.00 0.00 0.00 4.30
299 306 9.124807 GAAATAACTTACAAAAATGAACGGAGG 57.875 33.333 0.00 0.00 0.00 4.30
300 307 9.672086 TGAAATAACTTACAAAAATGAACGGAG 57.328 29.630 0.00 0.00 0.00 4.63
301 308 9.672086 CTGAAATAACTTACAAAAATGAACGGA 57.328 29.630 0.00 0.00 0.00 4.69
302 309 9.672086 TCTGAAATAACTTACAAAAATGAACGG 57.328 29.630 0.00 0.00 0.00 4.44
316 323 9.030301 CCGTTTTCAAATTGTCTGAAATAACTT 57.970 29.630 4.96 0.00 41.23 2.66
317 324 8.410141 TCCGTTTTCAAATTGTCTGAAATAACT 58.590 29.630 4.96 0.00 41.23 2.24
318 325 8.476925 GTCCGTTTTCAAATTGTCTGAAATAAC 58.523 33.333 4.96 1.86 41.23 1.89
319 326 8.410141 AGTCCGTTTTCAAATTGTCTGAAATAA 58.590 29.630 4.96 0.00 41.23 1.40
320 327 7.860373 CAGTCCGTTTTCAAATTGTCTGAAATA 59.140 33.333 4.96 0.00 41.23 1.40
321 328 6.697019 CAGTCCGTTTTCAAATTGTCTGAAAT 59.303 34.615 4.96 0.00 41.23 2.17
322 329 6.033341 CAGTCCGTTTTCAAATTGTCTGAAA 58.967 36.000 0.62 0.62 40.21 2.69
323 330 5.124776 ACAGTCCGTTTTCAAATTGTCTGAA 59.875 36.000 0.00 0.00 0.00 3.02
324 331 4.638421 ACAGTCCGTTTTCAAATTGTCTGA 59.362 37.500 0.00 0.00 0.00 3.27
325 332 4.920376 ACAGTCCGTTTTCAAATTGTCTG 58.080 39.130 0.00 0.00 0.00 3.51
326 333 5.576447 AACAGTCCGTTTTCAAATTGTCT 57.424 34.783 0.00 0.00 32.35 3.41
338 345 3.602483 ACAGTGTGTAAAACAGTCCGTT 58.398 40.909 0.00 0.00 40.66 4.44
339 346 3.118884 AGACAGTGTGTAAAACAGTCCGT 60.119 43.478 0.00 0.00 40.66 4.69
340 347 3.245284 CAGACAGTGTGTAAAACAGTCCG 59.755 47.826 0.00 0.00 40.66 4.79
341 348 4.439057 TCAGACAGTGTGTAAAACAGTCC 58.561 43.478 0.00 0.00 40.66 3.85
342 349 6.417191 TTTCAGACAGTGTGTAAAACAGTC 57.583 37.500 0.00 0.00 40.66 3.51
343 350 6.374333 ACATTTCAGACAGTGTGTAAAACAGT 59.626 34.615 0.00 0.00 43.57 3.55
344 351 6.785191 ACATTTCAGACAGTGTGTAAAACAG 58.215 36.000 0.00 0.00 40.26 3.16
345 352 6.751514 ACATTTCAGACAGTGTGTAAAACA 57.248 33.333 0.00 0.00 36.04 2.83
346 353 8.460831 AAAACATTTCAGACAGTGTGTAAAAC 57.539 30.769 0.00 0.00 0.00 2.43
349 356 9.781834 CTTAAAAACATTTCAGACAGTGTGTAA 57.218 29.630 0.00 0.00 0.00 2.41
350 357 8.402472 CCTTAAAAACATTTCAGACAGTGTGTA 58.598 33.333 0.00 0.00 0.00 2.90
351 358 7.093945 ACCTTAAAAACATTTCAGACAGTGTGT 60.094 33.333 0.00 0.00 0.00 3.72
352 359 7.257722 ACCTTAAAAACATTTCAGACAGTGTG 58.742 34.615 0.00 0.00 0.00 3.82
353 360 7.339466 AGACCTTAAAAACATTTCAGACAGTGT 59.661 33.333 0.00 0.00 0.00 3.55
354 361 7.707104 AGACCTTAAAAACATTTCAGACAGTG 58.293 34.615 0.00 0.00 0.00 3.66
355 362 7.881775 AGACCTTAAAAACATTTCAGACAGT 57.118 32.000 0.00 0.00 0.00 3.55
380 387 9.059260 GGCGTACTTCCTCCATTTATTTTTATA 57.941 33.333 0.00 0.00 0.00 0.98
381 388 7.558444 TGGCGTACTTCCTCCATTTATTTTTAT 59.442 33.333 0.00 0.00 0.00 1.40
382 389 6.885376 TGGCGTACTTCCTCCATTTATTTTTA 59.115 34.615 0.00 0.00 0.00 1.52
383 390 5.712917 TGGCGTACTTCCTCCATTTATTTTT 59.287 36.000 0.00 0.00 0.00 1.94
384 391 5.258051 TGGCGTACTTCCTCCATTTATTTT 58.742 37.500 0.00 0.00 0.00 1.82
385 392 4.850680 TGGCGTACTTCCTCCATTTATTT 58.149 39.130 0.00 0.00 0.00 1.40
386 393 4.497291 TGGCGTACTTCCTCCATTTATT 57.503 40.909 0.00 0.00 0.00 1.40
387 394 4.348168 AGATGGCGTACTTCCTCCATTTAT 59.652 41.667 0.00 0.00 39.25 1.40
388 395 3.709653 AGATGGCGTACTTCCTCCATTTA 59.290 43.478 0.00 0.00 39.25 1.40
389 396 2.505819 AGATGGCGTACTTCCTCCATTT 59.494 45.455 0.00 0.00 39.25 2.32
390 397 2.119495 AGATGGCGTACTTCCTCCATT 58.881 47.619 0.00 0.00 39.25 3.16
391 398 1.794714 AGATGGCGTACTTCCTCCAT 58.205 50.000 0.00 0.00 41.63 3.41
392 399 1.207089 CAAGATGGCGTACTTCCTCCA 59.793 52.381 0.00 0.00 0.00 3.86
393 400 1.207329 ACAAGATGGCGTACTTCCTCC 59.793 52.381 0.00 0.00 0.00 4.30
394 401 2.674796 ACAAGATGGCGTACTTCCTC 57.325 50.000 0.00 0.00 0.00 3.71
395 402 4.546829 TTTACAAGATGGCGTACTTCCT 57.453 40.909 0.00 0.00 0.00 3.36
396 403 5.813080 ATTTTACAAGATGGCGTACTTCC 57.187 39.130 0.00 0.00 0.00 3.46
397 404 9.221775 CAATTATTTTACAAGATGGCGTACTTC 57.778 33.333 0.00 0.00 0.00 3.01
398 405 8.736244 ACAATTATTTTACAAGATGGCGTACTT 58.264 29.630 0.00 0.00 0.00 2.24
399 406 8.276252 ACAATTATTTTACAAGATGGCGTACT 57.724 30.769 0.00 0.00 0.00 2.73
400 407 8.905103 AACAATTATTTTACAAGATGGCGTAC 57.095 30.769 0.00 0.00 0.00 3.67
404 411 9.435688 AGGAAAACAATTATTTTACAAGATGGC 57.564 29.630 6.91 0.00 35.20 4.40
449 457 7.726216 ACTTCGACACATCATCTCCAAATATA 58.274 34.615 0.00 0.00 0.00 0.86
451 459 5.977635 ACTTCGACACATCATCTCCAAATA 58.022 37.500 0.00 0.00 0.00 1.40
474 482 3.762407 TGGAAAATGACACCTTCGAGA 57.238 42.857 0.00 0.00 0.00 4.04
517 525 5.009710 AGTTTTCCTTTCTTTCGGTTCATCC 59.990 40.000 0.00 0.00 0.00 3.51
535 543 4.629200 TCGTCGTCCTCTCTAGTAGTTTTC 59.371 45.833 0.00 0.00 0.00 2.29
543 551 1.397692 GTTGGTCGTCGTCCTCTCTAG 59.602 57.143 9.90 0.00 0.00 2.43
643 696 3.007182 ACAAGTAATTCCGAACGAAGGGA 59.993 43.478 0.00 0.00 32.78 4.20
644 697 3.332034 ACAAGTAATTCCGAACGAAGGG 58.668 45.455 0.00 0.00 32.78 3.95
645 698 4.243270 AGACAAGTAATTCCGAACGAAGG 58.757 43.478 0.00 0.00 32.78 3.46
646 699 4.921515 TGAGACAAGTAATTCCGAACGAAG 59.078 41.667 0.00 0.00 32.78 3.79
647 700 4.873817 TGAGACAAGTAATTCCGAACGAA 58.126 39.130 0.00 0.00 34.14 3.85
648 701 4.508461 TGAGACAAGTAATTCCGAACGA 57.492 40.909 0.00 0.00 0.00 3.85
649 702 5.585500 TTTGAGACAAGTAATTCCGAACG 57.415 39.130 0.00 0.00 0.00 3.95
650 703 7.326063 CCATTTTTGAGACAAGTAATTCCGAAC 59.674 37.037 0.00 0.00 0.00 3.95
651 704 7.229707 TCCATTTTTGAGACAAGTAATTCCGAA 59.770 33.333 0.00 0.00 0.00 4.30
652 705 6.712998 TCCATTTTTGAGACAAGTAATTCCGA 59.287 34.615 0.00 0.00 0.00 4.55
653 706 6.908825 TCCATTTTTGAGACAAGTAATTCCG 58.091 36.000 0.00 0.00 0.00 4.30
654 707 8.306761 ACATCCATTTTTGAGACAAGTAATTCC 58.693 33.333 0.00 0.00 0.00 3.01
706 759 9.581099 GGAATTATTTGTCGTAAAAATGGATGT 57.419 29.630 0.00 0.00 0.00 3.06
707 760 8.742188 CGGAATTATTTGTCGTAAAAATGGATG 58.258 33.333 0.00 0.00 0.00 3.51
708 761 8.679100 TCGGAATTATTTGTCGTAAAAATGGAT 58.321 29.630 0.00 0.00 0.00 3.41
709 762 8.041829 TCGGAATTATTTGTCGTAAAAATGGA 57.958 30.769 0.00 0.00 0.00 3.41
710 763 8.580431 GTTCGGAATTATTTGTCGTAAAAATGG 58.420 33.333 0.00 0.00 0.00 3.16
711 764 8.301364 CGTTCGGAATTATTTGTCGTAAAAATG 58.699 33.333 0.00 0.00 0.00 2.32
712 765 7.482428 CCGTTCGGAATTATTTGTCGTAAAAAT 59.518 33.333 5.19 0.00 0.00 1.82
713 766 6.796072 CCGTTCGGAATTATTTGTCGTAAAAA 59.204 34.615 5.19 0.00 0.00 1.94
714 767 6.146837 TCCGTTCGGAATTATTTGTCGTAAAA 59.853 34.615 11.66 0.00 0.00 1.52
715 768 5.636965 TCCGTTCGGAATTATTTGTCGTAAA 59.363 36.000 11.66 0.00 0.00 2.01
716 769 5.167121 TCCGTTCGGAATTATTTGTCGTAA 58.833 37.500 11.66 0.00 0.00 3.18
717 770 4.742417 TCCGTTCGGAATTATTTGTCGTA 58.258 39.130 11.66 0.00 0.00 3.43
718 771 3.587923 TCCGTTCGGAATTATTTGTCGT 58.412 40.909 11.66 0.00 0.00 4.34
719 772 3.000925 CCTCCGTTCGGAATTATTTGTCG 59.999 47.826 14.79 0.00 33.41 4.35
720 773 3.311596 CCCTCCGTTCGGAATTATTTGTC 59.688 47.826 14.79 0.00 33.41 3.18
721 774 3.054948 TCCCTCCGTTCGGAATTATTTGT 60.055 43.478 14.79 0.00 33.41 2.83
722 775 3.537580 TCCCTCCGTTCGGAATTATTTG 58.462 45.455 14.79 1.97 33.41 2.32
723 776 3.199289 ACTCCCTCCGTTCGGAATTATTT 59.801 43.478 14.79 0.00 33.41 1.40
724 777 2.770232 ACTCCCTCCGTTCGGAATTATT 59.230 45.455 14.79 0.00 33.41 1.40
725 778 2.395619 ACTCCCTCCGTTCGGAATTAT 58.604 47.619 14.79 0.00 33.41 1.28
726 779 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
727 780 1.479730 GTACTCCCTCCGTTCGGAATT 59.520 52.381 14.79 0.00 33.41 2.17
728 781 1.109609 GTACTCCCTCCGTTCGGAAT 58.890 55.000 14.79 2.09 33.41 3.01
729 782 0.251297 TGTACTCCCTCCGTTCGGAA 60.251 55.000 14.79 0.04 33.41 4.30
730 783 0.962356 GTGTACTCCCTCCGTTCGGA 60.962 60.000 13.34 13.34 0.00 4.55
731 784 1.509923 GTGTACTCCCTCCGTTCGG 59.490 63.158 4.74 4.74 0.00 4.30
732 785 1.136147 CGTGTACTCCCTCCGTTCG 59.864 63.158 0.00 0.00 0.00 3.95
733 786 1.153881 GCGTGTACTCCCTCCGTTC 60.154 63.158 0.00 0.00 0.00 3.95
734 787 2.968206 GCGTGTACTCCCTCCGTT 59.032 61.111 0.00 0.00 0.00 4.44
735 788 3.437795 CGCGTGTACTCCCTCCGT 61.438 66.667 0.00 0.00 0.00 4.69
736 789 3.129502 TCGCGTGTACTCCCTCCG 61.130 66.667 5.77 0.00 0.00 4.63
737 790 2.488820 GTCGCGTGTACTCCCTCC 59.511 66.667 5.77 0.00 0.00 4.30
738 791 2.099831 CGTCGCGTGTACTCCCTC 59.900 66.667 5.77 0.00 0.00 4.30
739 792 3.437795 CCGTCGCGTGTACTCCCT 61.438 66.667 5.77 0.00 0.00 4.20
740 793 4.487412 CCCGTCGCGTGTACTCCC 62.487 72.222 5.77 0.00 0.00 4.30
741 794 2.981560 TTCCCGTCGCGTGTACTCC 61.982 63.158 5.77 0.00 0.00 3.85
742 795 1.799121 GTTCCCGTCGCGTGTACTC 60.799 63.158 5.77 0.00 0.00 2.59
743 796 2.192608 GAGTTCCCGTCGCGTGTACT 62.193 60.000 5.77 2.94 0.00 2.73
744 797 1.799121 GAGTTCCCGTCGCGTGTAC 60.799 63.158 5.77 0.00 0.00 2.90
745 798 2.562912 GAGTTCCCGTCGCGTGTA 59.437 61.111 5.77 0.00 0.00 2.90
746 799 4.695231 CGAGTTCCCGTCGCGTGT 62.695 66.667 5.77 0.00 0.00 4.49
962 1044 2.303549 CTGCTGGCTCCTAACCCGAG 62.304 65.000 0.00 0.00 0.00 4.63
969 1051 3.150335 CTCCGCTGCTGGCTCCTA 61.150 66.667 0.00 0.00 39.13 2.94
983 1065 1.078848 ATTGCTGTCTCGGTGCTCC 60.079 57.895 0.00 0.00 0.00 4.70
984 1066 1.364626 CCATTGCTGTCTCGGTGCTC 61.365 60.000 0.00 0.00 0.00 4.26
985 1067 1.376424 CCATTGCTGTCTCGGTGCT 60.376 57.895 0.00 0.00 0.00 4.40
986 1068 3.044059 GCCATTGCTGTCTCGGTGC 62.044 63.158 0.00 0.00 33.53 5.01
1230 1328 3.637273 GCCTCCCTCGTTGGTGGT 61.637 66.667 13.11 0.00 40.48 4.16
1232 1330 4.760047 CGGCCTCCCTCGTTGGTG 62.760 72.222 0.00 0.00 0.00 4.17
1365 1469 2.496817 CAGAGGCGCAGGTACTCC 59.503 66.667 10.83 0.00 34.60 3.85
1467 1571 1.125093 TTTCGGGCCTGAGGAAGACA 61.125 55.000 15.42 0.00 0.00 3.41
1557 1664 4.218312 GGGAGGGATCAAGCAACATTTAT 58.782 43.478 0.00 0.00 0.00 1.40
1630 1737 2.159296 GGAACCAACAGCGTGTCTTTTT 60.159 45.455 0.00 0.00 0.00 1.94
1671 1778 7.067008 CCCGGATTAAAATGAACAGTAGAACAT 59.933 37.037 0.73 0.00 0.00 2.71
1709 1816 5.055812 CAGATCTCTAGCCTTGTGAAATCC 58.944 45.833 0.00 0.00 0.00 3.01
1930 2038 4.408276 TCAGATTTAGATCGAGGGGTAGG 58.592 47.826 0.00 0.00 37.37 3.18
2040 2166 1.068588 GTTCTTTTCTGGGTGCCCAAC 59.931 52.381 11.54 1.02 46.63 3.77
2096 2222 8.045507 CCATTATCATCAGCATGGTAACTAGAT 58.954 37.037 0.00 0.34 38.23 1.98
2103 2229 4.566278 GGAGCCATTATCATCAGCATGGTA 60.566 45.833 0.00 0.00 38.81 3.25
2108 2234 1.417517 ACGGAGCCATTATCATCAGCA 59.582 47.619 0.00 0.00 0.00 4.41
2127 2253 5.487433 CCCACTTCCAATTCCCAAAATAAC 58.513 41.667 0.00 0.00 0.00 1.89
2128 2254 4.019771 GCCCACTTCCAATTCCCAAAATAA 60.020 41.667 0.00 0.00 0.00 1.40
2143 2269 4.587056 GGGATGATGGCCCACTTC 57.413 61.111 0.00 1.89 45.31 3.01
2148 2274 2.031495 ACTAGTAGGGATGATGGCCC 57.969 55.000 0.00 0.00 46.40 5.80
2149 2275 4.532521 ACAATACTAGTAGGGATGATGGCC 59.467 45.833 8.85 0.00 0.00 5.36
2150 2276 5.746990 ACAATACTAGTAGGGATGATGGC 57.253 43.478 8.85 0.00 0.00 4.40
2151 2277 8.840321 CAAAAACAATACTAGTAGGGATGATGG 58.160 37.037 8.85 0.00 0.00 3.51
2152 2278 9.613428 TCAAAAACAATACTAGTAGGGATGATG 57.387 33.333 8.85 3.68 0.00 3.07
2153 2279 9.838339 CTCAAAAACAATACTAGTAGGGATGAT 57.162 33.333 8.85 0.00 0.00 2.45
2154 2280 7.769044 GCTCAAAAACAATACTAGTAGGGATGA 59.231 37.037 8.85 5.75 0.00 2.92
2155 2281 7.552687 TGCTCAAAAACAATACTAGTAGGGATG 59.447 37.037 8.85 7.35 0.00 3.51
2156 2282 7.553044 GTGCTCAAAAACAATACTAGTAGGGAT 59.447 37.037 8.85 0.00 0.00 3.85
2157 2283 6.877322 GTGCTCAAAAACAATACTAGTAGGGA 59.123 38.462 8.85 0.00 0.00 4.20
2158 2284 6.653320 TGTGCTCAAAAACAATACTAGTAGGG 59.347 38.462 8.85 5.49 0.00 3.53
2159 2285 7.667043 TGTGCTCAAAAACAATACTAGTAGG 57.333 36.000 8.85 5.84 0.00 3.18
2160 2286 8.721478 ACATGTGCTCAAAAACAATACTAGTAG 58.279 33.333 8.85 0.00 0.00 2.57
2161 2287 8.615878 ACATGTGCTCAAAAACAATACTAGTA 57.384 30.769 4.77 4.77 0.00 1.82
2162 2288 7.510549 ACATGTGCTCAAAAACAATACTAGT 57.489 32.000 0.00 0.00 0.00 2.57
2163 2289 8.801715 AAACATGTGCTCAAAAACAATACTAG 57.198 30.769 0.00 0.00 0.00 2.57
2164 2290 9.243637 GAAAACATGTGCTCAAAAACAATACTA 57.756 29.630 0.00 0.00 0.00 1.82
2165 2291 7.763528 TGAAAACATGTGCTCAAAAACAATACT 59.236 29.630 0.00 0.00 0.00 2.12
2166 2292 7.904094 TGAAAACATGTGCTCAAAAACAATAC 58.096 30.769 0.00 0.00 0.00 1.89
2167 2293 8.484641 TTGAAAACATGTGCTCAAAAACAATA 57.515 26.923 16.58 0.00 0.00 1.90
2168 2294 6.981762 TGAAAACATGTGCTCAAAAACAAT 57.018 29.167 0.00 0.00 0.00 2.71
2169 2295 6.791887 TTGAAAACATGTGCTCAAAAACAA 57.208 29.167 16.58 4.85 0.00 2.83
2209 2335 9.077885 TGCAGTATGAACATCTATATGACTACA 57.922 33.333 0.00 0.00 39.69 2.74
2218 2344 7.087007 CGATGTACTGCAGTATGAACATCTAT 58.913 38.462 35.18 18.88 39.34 1.98
2234 2360 7.759465 TCTAGAGTAGAAAAACCGATGTACTG 58.241 38.462 0.00 0.00 0.00 2.74
2243 2369 9.993454 TCCTTTAAACTCTAGAGTAGAAAAACC 57.007 33.333 25.42 0.00 41.58 3.27
2249 2381 8.880991 ATGTGTCCTTTAAACTCTAGAGTAGA 57.119 34.615 25.42 13.54 41.58 2.59
2253 2385 9.360093 CACTAATGTGTCCTTTAAACTCTAGAG 57.640 37.037 18.49 18.49 39.24 2.43
2258 2390 7.041372 TGCTTCACTAATGTGTCCTTTAAACTC 60.041 37.037 0.00 0.00 44.14 3.01
2267 2399 5.220931 GGAATGATGCTTCACTAATGTGTCC 60.221 44.000 4.14 0.00 44.14 4.02
2268 2400 5.355071 TGGAATGATGCTTCACTAATGTGTC 59.645 40.000 4.14 0.00 44.14 3.67
2285 2417 5.164620 TCAGATAACAGCAAGTGGAATGA 57.835 39.130 0.00 0.00 0.00 2.57
2302 2434 9.140874 TCACTGTCATCTAATTGTAGATCAGAT 57.859 33.333 14.58 0.00 43.91 2.90
2368 2500 5.412594 TGCACTGTGATTTGAATCTTCTACC 59.587 40.000 12.86 0.00 36.39 3.18
2390 2523 1.200716 CACCACCACTGACATGATTGC 59.799 52.381 0.00 0.00 0.00 3.56
2437 2575 5.645929 ACCAACTAAATCGTTGTGATGCATA 59.354 36.000 0.00 0.00 42.00 3.14
2491 2629 4.455877 ACAGGCACTACTTCTTATGCAAAC 59.544 41.667 0.00 0.00 39.92 2.93
2574 2718 0.944311 CCGAACCAGTGACAAGGACG 60.944 60.000 0.98 6.36 0.00 4.79
2657 2802 5.049680 ACACTGTTTTAAGATGCAGGTAACG 60.050 40.000 0.00 0.00 46.39 3.18
2809 2956 6.006449 AGATTTGTCATTGACTTGTTAGCCT 58.994 36.000 17.26 2.43 33.15 4.58
2866 3024 3.975312 TGTTTAGGTCCACCCAGAACTTA 59.025 43.478 0.00 0.00 34.90 2.24
2938 3096 2.012673 CCACTTATCTTGCCTGTGAGC 58.987 52.381 0.00 0.00 0.00 4.26
2943 3101 3.520290 TCGTACCACTTATCTTGCCTG 57.480 47.619 0.00 0.00 0.00 4.85
2983 3142 2.603776 GTGACCACGGAGGGACCT 60.604 66.667 0.00 0.00 43.89 3.85
3010 3169 1.214424 ACAACTTGCAAGGGGTAGTGT 59.786 47.619 29.18 18.35 0.00 3.55
3065 3226 6.252228 GCTACAAGACTAAATCATGCAAAAGC 59.748 38.462 0.00 0.00 28.53 3.51
3099 3261 3.758554 ACAAAGTTGCCAGGCTATAACAG 59.241 43.478 14.15 5.95 0.00 3.16
3100 3262 3.756434 GACAAAGTTGCCAGGCTATAACA 59.244 43.478 14.15 0.00 0.00 2.41
3101 3263 3.756434 TGACAAAGTTGCCAGGCTATAAC 59.244 43.478 14.15 9.06 0.00 1.89
3104 3266 2.584835 TGACAAAGTTGCCAGGCTAT 57.415 45.000 14.15 0.00 0.00 2.97
3108 3270 0.675083 TGCATGACAAAGTTGCCAGG 59.325 50.000 0.00 0.00 35.51 4.45
3109 3271 2.129607 GTTGCATGACAAAGTTGCCAG 58.870 47.619 0.00 0.00 40.82 4.85
3110 3272 1.755959 AGTTGCATGACAAAGTTGCCA 59.244 42.857 0.00 0.00 40.82 4.92
3111 3273 2.035066 AGAGTTGCATGACAAAGTTGCC 59.965 45.455 0.00 0.00 40.82 4.52
3112 3274 3.360249 AGAGTTGCATGACAAAGTTGC 57.640 42.857 0.00 0.00 40.82 4.17
3113 3275 4.923893 TGAAGAGTTGCATGACAAAGTTG 58.076 39.130 0.00 0.00 40.82 3.16
3114 3276 5.105797 TGTTGAAGAGTTGCATGACAAAGTT 60.106 36.000 0.00 0.00 40.82 2.66
3115 3277 4.398988 TGTTGAAGAGTTGCATGACAAAGT 59.601 37.500 0.00 0.00 40.82 2.66
3116 3278 4.923893 TGTTGAAGAGTTGCATGACAAAG 58.076 39.130 0.00 0.00 40.82 2.77
3117 3279 4.979943 TGTTGAAGAGTTGCATGACAAA 57.020 36.364 0.00 0.00 40.82 2.83
3118 3280 4.261698 CCATGTTGAAGAGTTGCATGACAA 60.262 41.667 0.00 0.00 39.21 3.18
3119 3281 3.253921 CCATGTTGAAGAGTTGCATGACA 59.746 43.478 0.00 0.00 39.21 3.58
3120 3282 3.366679 CCCATGTTGAAGAGTTGCATGAC 60.367 47.826 0.00 0.00 39.21 3.06
3121 3283 2.821378 CCCATGTTGAAGAGTTGCATGA 59.179 45.455 0.00 0.00 39.21 3.07
3122 3284 2.559668 ACCCATGTTGAAGAGTTGCATG 59.440 45.455 0.00 0.00 37.32 4.06
3123 3285 2.559668 CACCCATGTTGAAGAGTTGCAT 59.440 45.455 0.00 0.00 0.00 3.96
3124 3286 1.955778 CACCCATGTTGAAGAGTTGCA 59.044 47.619 0.00 0.00 0.00 4.08
3125 3287 1.956477 ACACCCATGTTGAAGAGTTGC 59.044 47.619 0.00 0.00 34.46 4.17
3136 3298 1.241315 GCACGCCTTAACACCCATGT 61.241 55.000 0.00 0.00 42.46 3.21
3137 3299 1.240641 TGCACGCCTTAACACCCATG 61.241 55.000 0.00 0.00 0.00 3.66
3138 3300 0.960364 CTGCACGCCTTAACACCCAT 60.960 55.000 0.00 0.00 0.00 4.00
3139 3301 1.599518 CTGCACGCCTTAACACCCA 60.600 57.895 0.00 0.00 0.00 4.51
3140 3302 1.574702 GACTGCACGCCTTAACACCC 61.575 60.000 0.00 0.00 0.00 4.61
3141 3303 0.882927 TGACTGCACGCCTTAACACC 60.883 55.000 0.00 0.00 0.00 4.16
3142 3304 0.941542 TTGACTGCACGCCTTAACAC 59.058 50.000 0.00 0.00 0.00 3.32
3226 3390 6.061022 TGTTTTTCTGCTATCCTCCACATA 57.939 37.500 0.00 0.00 0.00 2.29
3275 3439 5.942872 ACATTTAGCTCAAACTGTACATGC 58.057 37.500 0.00 0.00 0.00 4.06
3277 3441 8.292448 CAGAAACATTTAGCTCAAACTGTACAT 58.708 33.333 0.00 0.00 0.00 2.29
3301 3465 1.093159 GAGCAATGCTGGAAGGACAG 58.907 55.000 14.48 0.00 36.81 3.51
3390 3554 5.580297 TGCTTTCACAACCTGAAATTTGAAC 59.420 36.000 0.00 0.00 45.87 3.18
3426 3591 1.301716 CCCTCGCGGAATGGGTATG 60.302 63.158 6.13 0.00 36.32 2.39
3435 3600 1.756950 AACAGATAGCCCTCGCGGA 60.757 57.895 6.13 0.00 41.18 5.54
3468 3633 1.449246 CTTCAGCTCCTCCCTTGCG 60.449 63.158 0.00 0.00 0.00 4.85
3657 3822 2.461110 GCCGGCCATGAAGTACGTG 61.461 63.158 18.11 0.00 35.47 4.49
3825 3990 0.105246 AGGGGCTCTGAGGATGTAGG 60.105 60.000 6.83 0.00 0.00 3.18
3852 4017 3.695606 TGGTGGCTCTCCTGCGAC 61.696 66.667 0.00 0.00 40.22 5.19
3876 4041 3.490439 TCACAATGGCAGTGAGAAAGA 57.510 42.857 23.05 8.12 40.80 2.52
3895 4060 6.790285 AAAATTCCAAGCAACACATCAATC 57.210 33.333 0.00 0.00 0.00 2.67
4013 4178 2.223479 ACACAGGCATTTCACAACGAAC 60.223 45.455 0.00 0.00 31.73 3.95
4015 4180 1.601903 GACACAGGCATTTCACAACGA 59.398 47.619 0.00 0.00 0.00 3.85
4016 4181 1.334960 GGACACAGGCATTTCACAACG 60.335 52.381 0.00 0.00 0.00 4.10
4017 4182 1.956477 AGGACACAGGCATTTCACAAC 59.044 47.619 0.00 0.00 0.00 3.32
4018 4183 1.955778 CAGGACACAGGCATTTCACAA 59.044 47.619 0.00 0.00 0.00 3.33
4020 4185 1.896220 TCAGGACACAGGCATTTCAC 58.104 50.000 0.00 0.00 0.00 3.18
4021 4186 2.439409 CATCAGGACACAGGCATTTCA 58.561 47.619 0.00 0.00 0.00 2.69
4070 4243 3.871485 TGACTTCTCTCGTCTACTACCC 58.129 50.000 0.00 0.00 32.70 3.69
4182 4360 1.679139 TTGGACAAGTTGAGCCACAG 58.321 50.000 17.67 0.00 0.00 3.66
4184 4362 3.383761 CATTTTGGACAAGTTGAGCCAC 58.616 45.455 17.67 2.18 0.00 5.01
4243 4421 3.060479 TGGATTATGACCCTGCCTACT 57.940 47.619 0.00 0.00 0.00 2.57
4244 4422 3.327757 TCATGGATTATGACCCTGCCTAC 59.672 47.826 0.00 0.00 40.82 3.18
4284 4462 5.440610 AGAATAAGCCTAGACCAAACCATG 58.559 41.667 0.00 0.00 0.00 3.66
4353 4533 0.733150 GTAGCCGTTGAAAGATGCCC 59.267 55.000 0.00 0.00 0.00 5.36
4387 4567 0.734889 CTTAAATGCTGACGGCCCTG 59.265 55.000 3.22 0.00 40.92 4.45
4407 4587 4.159557 ACAGACCAGGCCATAACAAAAAT 58.840 39.130 5.01 0.00 0.00 1.82
4509 4703 2.740714 GCAATGGACGGTCACGAGC 61.741 63.158 10.76 4.92 44.60 5.03
4570 4764 2.347490 CCGTGCCAGCCACTAGTT 59.653 61.111 0.00 0.00 42.42 2.24
4600 4794 2.283529 CGCTGTACCCTGGTCCTGT 61.284 63.158 0.00 0.00 0.00 4.00
4602 4796 1.229082 TTCGCTGTACCCTGGTCCT 60.229 57.895 0.00 0.00 0.00 3.85
4603 4797 1.079336 GTTCGCTGTACCCTGGTCC 60.079 63.158 0.00 0.00 0.00 4.46
4604 4798 1.079336 GGTTCGCTGTACCCTGGTC 60.079 63.158 0.00 0.00 0.00 4.02
4605 4799 1.827399 CTGGTTCGCTGTACCCTGGT 61.827 60.000 0.00 0.00 34.66 4.00
4606 4800 1.079127 CTGGTTCGCTGTACCCTGG 60.079 63.158 0.00 0.00 34.66 4.45
4607 4801 1.741770 GCTGGTTCGCTGTACCCTG 60.742 63.158 0.00 0.00 34.66 4.45
4608 4802 2.214216 TGCTGGTTCGCTGTACCCT 61.214 57.895 0.00 0.00 34.66 4.34
4609 4803 2.033194 GTGCTGGTTCGCTGTACCC 61.033 63.158 0.00 0.00 34.66 3.69
4610 4804 2.380410 CGTGCTGGTTCGCTGTACC 61.380 63.158 0.00 0.00 36.17 3.34
4611 4805 0.387622 TACGTGCTGGTTCGCTGTAC 60.388 55.000 0.00 0.00 0.00 2.90
4612 4806 0.387622 GTACGTGCTGGTTCGCTGTA 60.388 55.000 0.00 0.00 0.00 2.74
4613 4807 1.663702 GTACGTGCTGGTTCGCTGT 60.664 57.895 0.00 0.00 0.00 4.40
4614 4808 2.716828 CGTACGTGCTGGTTCGCTG 61.717 63.158 7.22 0.00 0.00 5.18
4615 4809 2.430244 CGTACGTGCTGGTTCGCT 60.430 61.111 7.22 0.00 0.00 4.93
4616 4810 2.429571 TCGTACGTGCTGGTTCGC 60.430 61.111 16.05 0.00 31.82 4.70
4617 4811 1.081641 AGTCGTACGTGCTGGTTCG 60.082 57.895 16.05 1.54 32.84 3.95
4618 4812 1.007336 CCAGTCGTACGTGCTGGTTC 61.007 60.000 32.85 12.56 43.42 3.62
4619 4813 1.006571 CCAGTCGTACGTGCTGGTT 60.007 57.895 32.85 8.87 43.42 3.67
4620 4814 2.649034 CCAGTCGTACGTGCTGGT 59.351 61.111 32.85 9.55 43.42 4.00
4622 4816 1.443872 GGACCAGTCGTACGTGCTG 60.444 63.158 24.66 24.66 0.00 4.41
4623 4817 1.177256 AAGGACCAGTCGTACGTGCT 61.177 55.000 16.05 11.83 0.00 4.40
4624 4818 0.731855 GAAGGACCAGTCGTACGTGC 60.732 60.000 16.05 9.66 0.00 5.34
4625 4819 0.109412 GGAAGGACCAGTCGTACGTG 60.109 60.000 16.05 7.04 38.79 4.49
4626 4820 1.580845 CGGAAGGACCAGTCGTACGT 61.581 60.000 16.05 0.00 38.90 3.57
4627 4821 1.136147 CGGAAGGACCAGTCGTACG 59.864 63.158 9.53 9.53 38.90 3.67
4628 4822 0.109412 CACGGAAGGACCAGTCGTAC 60.109 60.000 0.00 0.00 38.90 3.67
4629 4823 1.246056 CCACGGAAGGACCAGTCGTA 61.246 60.000 0.00 0.00 38.90 3.43
4642 4836 0.390603 CATGGCGAGTTAACCACGGA 60.391 55.000 19.23 0.00 39.19 4.69
4671 4896 1.133976 GCCATCCACTAGTTCCTGCAT 60.134 52.381 0.00 0.00 0.00 3.96
4735 4960 2.034687 GTCCATGCTGCCACTGGT 59.965 61.111 11.28 0.00 0.00 4.00
4736 4961 2.753043 GGTCCATGCTGCCACTGG 60.753 66.667 0.00 1.77 0.00 4.00
4737 4962 2.753043 GGGTCCATGCTGCCACTG 60.753 66.667 0.00 0.00 0.00 3.66
4738 4963 4.415150 CGGGTCCATGCTGCCACT 62.415 66.667 0.00 0.00 0.00 4.00
4739 4964 4.722700 ACGGGTCCATGCTGCCAC 62.723 66.667 0.00 0.00 0.00 5.01
4740 4965 4.408821 GACGGGTCCATGCTGCCA 62.409 66.667 0.00 0.00 0.00 4.92
4741 4966 3.918253 TTGACGGGTCCATGCTGCC 62.918 63.158 0.00 0.00 0.00 4.85
4742 4967 2.359850 TTGACGGGTCCATGCTGC 60.360 61.111 0.00 0.00 0.00 5.25
4743 4968 2.390599 CGTTGACGGGTCCATGCTG 61.391 63.158 0.00 0.00 35.37 4.41
4744 4969 2.047274 CGTTGACGGGTCCATGCT 60.047 61.111 0.00 0.00 35.37 3.79
4746 4971 0.796312 CTTTCGTTGACGGGTCCATG 59.204 55.000 3.48 0.00 40.29 3.66
4747 4972 0.321298 CCTTTCGTTGACGGGTCCAT 60.321 55.000 3.48 0.00 40.29 3.41
4748 4973 1.070105 CCTTTCGTTGACGGGTCCA 59.930 57.895 3.48 0.00 40.29 4.02
4749 4974 0.249996 TTCCTTTCGTTGACGGGTCC 60.250 55.000 3.48 0.00 40.29 4.46
4750 4975 1.585297 TTTCCTTTCGTTGACGGGTC 58.415 50.000 3.48 0.00 40.29 4.46
4751 4976 2.041251 TTTTCCTTTCGTTGACGGGT 57.959 45.000 3.48 0.00 40.29 5.28
4779 5004 3.193263 CACTGCTAGATTGCTACAGGTG 58.807 50.000 0.00 0.00 33.67 4.00
4783 5008 1.471501 CGGCACTGCTAGATTGCTACA 60.472 52.381 0.00 0.00 36.46 2.74
4810 5035 5.203358 TCAGCTTTATGATTGTTCGTTCG 57.797 39.130 0.00 0.00 0.00 3.95
4834 5204 2.346541 GGAAGCTGGAAAGCTGGCC 61.347 63.158 0.00 0.00 45.54 5.36
4842 5212 1.444933 TCCTTTCCTGGAAGCTGGAA 58.555 50.000 18.90 0.00 40.21 3.53
4843 5213 1.073923 GTTCCTTTCCTGGAAGCTGGA 59.926 52.381 17.90 17.90 45.62 3.86
4844 5214 1.202927 TGTTCCTTTCCTGGAAGCTGG 60.203 52.381 9.42 12.78 45.62 4.85
4845 5215 2.157738 CTGTTCCTTTCCTGGAAGCTG 58.842 52.381 9.42 4.48 45.62 4.24
4846 5216 1.546548 GCTGTTCCTTTCCTGGAAGCT 60.547 52.381 9.42 0.00 45.62 3.74
4847 5217 0.884514 GCTGTTCCTTTCCTGGAAGC 59.115 55.000 9.42 3.88 45.62 3.86
4848 5218 1.160137 CGCTGTTCCTTTCCTGGAAG 58.840 55.000 9.42 4.31 45.62 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.