AutoCloner

Multiple sequence alignment - TraesCS1A01G167700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS1A01G167700	chr1A	100.000	2573	0	0	1	2573	300566550	300569122	0.000000e+00	4752.0
1	TraesCS1A01G167700	chr1A	93.197	147	7	3	2075	2220	495736810	495736666	2.010000e-51	213.0
2	TraesCS1A01G167700	chr1A	78.947	95	20	0	1480	1574	300673075	300673169	5.940000e-07	65.8
3	TraesCS1A01G167700	chr1A	79.545	88	18	0	1480	1567	300577436	300577523	2.140000e-06	63.9
4	TraesCS1A01G167700	chr1D	93.387	1376	60	8	651	2025	247133008	247131663	0.000000e+00	2008.0
5	TraesCS1A01G167700	chr1D	92.929	297	19	2	2278	2573	247131034	247130739	5.090000e-117	431.0
6	TraesCS1A01G167700	chr1D	95.652	46	2	0	2033	2078	247131151	247131106	9.870000e-10	75.0
7	TraesCS1A01G167700	chr1D	84.058	69	11	0	1505	1573	246679506	246679438	1.650000e-07	67.6
8	TraesCS1A01G167700	chr1D	82.857	70	12	0	1504	1573	247122883	247122814	2.140000e-06	63.9
9	TraesCS1A01G167700	chr1B	93.777	1173	52	13	750	1920	330838954	330840107	0.000000e+00	1742.0
10	TraesCS1A01G167700	chr1B	88.000	125	15	0	5	129	592372088	592371964	5.740000e-32	148.0
11	TraesCS1A01G167700	chr1B	84.733	131	15	4	5	131	8552028	8551899	2.690000e-25	126.0
12	TraesCS1A01G167700	chr1B	79.545	88	18	0	1480	1567	330991915	330992002	2.140000e-06	63.9
13	TraesCS1A01G167700	chr3A	95.205	146	6	1	2075	2220	552566847	552566991	1.990000e-56	230.0
14	TraesCS1A01G167700	chr3A	78.090	178	34	5	505	679	714540210	714540035	9.740000e-20	108.0
15	TraesCS1A01G167700	chr3A	84.091	88	14	0	1480	1567	46844549	46844636	4.560000e-13	86.1
16	TraesCS1A01G167700	chr3A	82.857	70	9	3	2479	2547	669738051	669737984	2.760000e-05	60.2
17	TraesCS1A01G167700	chr2D	83.817	241	33	6	2324	2562	591901185	591900949	9.260000e-55	224.0
18	TraesCS1A01G167700	chr2D	79.638	221	41	4	2328	2547	196910184	196909967	3.430000e-34	156.0
19	TraesCS1A01G167700	chr4D	82.609	253	40	3	2311	2562	191875568	191875817	1.200000e-53	220.0
20	TraesCS1A01G167700	chr4D	80.451	133	21	2	1	129	85614220	85614089	2.110000e-16	97.1
21	TraesCS1A01G167700	chr2A	80.620	258	42	5	2313	2566	53264967	53264714	2.610000e-45	193.0
22	TraesCS1A01G167700	chrUn	88.435	147	15	2	2073	2218	162824072	162824217	2.630000e-40	176.0
23	TraesCS1A01G167700	chr3B	88.435	147	15	2	2073	2218	801961264	801961119	2.630000e-40	176.0
24	TraesCS1A01G167700	chr3B	88.435	147	15	2	2073	2218	802107664	802107519	2.630000e-40	176.0
25	TraesCS1A01G167700	chr3B	88.435	147	15	2	2073	2218	802806906	802807051	2.630000e-40	176.0
26	TraesCS1A01G167700	chr3B	78.531	177	32	6	505	679	4320380	4320208	7.530000e-21	111.0
27	TraesCS1A01G167700	chr3B	84.091	88	14	0	1480	1567	59046577	59046664	4.560000e-13	86.1
28	TraesCS1A01G167700	chr3B	79.464	112	21	2	536	646	628962621	628962731	7.630000e-11	78.7
29	TraesCS1A01G167700	chr7A	82.000	200	34	2	2370	2567	15302028	15302227	4.400000e-38	169.0
30	TraesCS1A01G167700	chr7A	77.193	171	34	5	505	673	558758820	558758653	7.580000e-16	95.3
31	TraesCS1A01G167700	chr7A	78.626	131	27	1	1	130	18059906	18059776	4.560000e-13	86.1
32	TraesCS1A01G167700	chr6B	87.075	147	17	2	2073	2218	136107081	136106936	5.700000e-37	165.0
33	TraesCS1A01G167700	chr3D	87.597	129	16	0	502	630	8676499	8676627	1.590000e-32	150.0
34	TraesCS1A01G167700	chr3D	77.778	207	36	9	433	630	486136958	486136753	4.500000e-23	119.0
35	TraesCS1A01G167700	chr3D	76.623	231	45	8	505	732	533681806	533681582	4.500000e-23	119.0
36	TraesCS1A01G167700	chr3D	85.047	107	15	1	2313	2419	522767480	522767585	9.740000e-20	108.0
37	TraesCS1A01G167700	chr4B	87.597	129	14	2	1	128	546261528	546261401	5.740000e-32	148.0
38	TraesCS1A01G167700	chr4B	87.603	121	15	0	1408	1528	546649048	546648928	9.600000e-30	141.0
39	TraesCS1A01G167700	chr5D	75.333	300	58	9	440	731	505397738	505398029	2.080000e-26	130.0
40	TraesCS1A01G167700	chr5D	77.155	232	45	6	2341	2569	490501423	490501197	7.470000e-26	128.0
41	TraesCS1A01G167700	chr5D	79.259	135	24	1	1	131	542293600	542293466	9.800000e-15	91.6
42	TraesCS1A01G167700	chr5B	83.448	145	15	4	2074	2218	49542093	49541958	2.690000e-25	126.0
43	TraesCS1A01G167700	chr5B	79.739	153	27	4	499	649	388536167	388536017	9.740000e-20	108.0
44	TraesCS1A01G167700	chr5B	80.000	135	20	4	1	130	511619945	511619813	2.730000e-15	93.5
45	TraesCS1A01G167700	chr5B	77.019	161	29	8	515	672	246183886	246183731	4.560000e-13	86.1
46	TraesCS1A01G167700	chr5B	95.122	41	2	0	88	128	598440513	598440553	5.940000e-07	65.8
47	TraesCS1A01G167700	chr2B	78.947	171	34	2	505	674	101069687	101069518	5.820000e-22	115.0
48	TraesCS1A01G167700	chr4A	81.633	147	15	7	2072	2218	124829983	124830117	7.530000e-21	111.0
49	TraesCS1A01G167700	chr4A	79.042	167	29	4	515	679	621239719	621239557	2.710000e-20	110.0
50	TraesCS1A01G167700	chr5A	79.851	134	22	4	1	130	536360465	536360333	2.730000e-15	93.5
51	TraesCS1A01G167700	chr7D	100.000	28	0	0	434	461	63324944	63324917	5.000000e-03	52.8

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS1A01G167700	chr1A	300566550	300569122	2572	False	4752	4752	100.000000	1	2573	1	chr1A.!!$F1	2572
1	TraesCS1A01G167700	chr1D	247130739	247133008	2269	True	838	2008	93.989333	651	2573	3	chr1D.!!$R3	1922
2	TraesCS1A01G167700	chr1B	330838954	330840107	1153	False	1742	1742	93.777000	750	1920	1	chr1B.!!$F1	1170

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
442	443	0.031857	TTTTGCGGCACTGTGATTGG	59.968	50.0	12.86	0.0	0.0	3.16	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
2127	2634	0.035056	CTTGTGGATTCGGGGCTCTT	60.035	55.0	0.0	0.0	0.0	2.85	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
18	19	3.373020	GTGATGTTGTTGCGCTCAG	57.627	52.632	9.73	0.00	0.00	3.35
32	33	2.831333	CGCTCAGCATCTTTGTATCCT	58.169	47.619	0.00	0.00	0.00	3.24
33	34	2.543012	CGCTCAGCATCTTTGTATCCTG	59.457	50.000	0.00	0.00	0.00	3.86
34	35	3.539604	GCTCAGCATCTTTGTATCCTGT	58.460	45.455	0.00	0.00	0.00	4.00
35	36	3.559242	GCTCAGCATCTTTGTATCCTGTC	59.441	47.826	0.00	0.00	0.00	3.51
36	37	4.682859	GCTCAGCATCTTTGTATCCTGTCT	60.683	45.833	0.00	0.00	0.00	3.41
37	38	5.426504	CTCAGCATCTTTGTATCCTGTCTT	58.573	41.667	0.00	0.00	0.00	3.01
38	39	5.181009	TCAGCATCTTTGTATCCTGTCTTG	58.819	41.667	0.00	0.00	0.00	3.02
39	40	4.334759	CAGCATCTTTGTATCCTGTCTTGG	59.665	45.833	0.00	0.00	0.00	3.61
40	41	4.225942	AGCATCTTTGTATCCTGTCTTGGA	59.774	41.667	0.00	0.00	40.82	3.53
42	43	5.008415	GCATCTTTGTATCCTGTCTTGGATG	59.992	44.000	6.32	0.00	45.58	3.51
43	44	5.762179	TCTTTGTATCCTGTCTTGGATGT	57.238	39.130	6.32	0.00	45.58	3.06
44	45	5.491070	TCTTTGTATCCTGTCTTGGATGTG	58.509	41.667	6.32	0.00	45.58	3.21
45	46	4.908601	TTGTATCCTGTCTTGGATGTGT	57.091	40.909	6.32	0.00	45.58	3.72
46	47	4.206477	TGTATCCTGTCTTGGATGTGTG	57.794	45.455	6.32	0.00	45.58	3.82
47	48	3.582647	TGTATCCTGTCTTGGATGTGTGT	59.417	43.478	6.32	0.00	45.58	3.72
48	49	2.549064	TCCTGTCTTGGATGTGTGTG	57.451	50.000	0.00	0.00	0.00	3.82
49	50	1.768275	TCCTGTCTTGGATGTGTGTGT	59.232	47.619	0.00	0.00	0.00	3.72
50	51	2.172505	TCCTGTCTTGGATGTGTGTGTT	59.827	45.455	0.00	0.00	0.00	3.32
51	52	2.291465	CCTGTCTTGGATGTGTGTGTTG	59.709	50.000	0.00	0.00	0.00	3.33
52	53	2.945008	CTGTCTTGGATGTGTGTGTTGT	59.055	45.455	0.00	0.00	0.00	3.32
53	54	2.682352	TGTCTTGGATGTGTGTGTTGTG	59.318	45.455	0.00	0.00	0.00	3.33
54	55	2.682856	GTCTTGGATGTGTGTGTTGTGT	59.317	45.455	0.00	0.00	0.00	3.72
55	56	3.128589	GTCTTGGATGTGTGTGTTGTGTT	59.871	43.478	0.00	0.00	0.00	3.32
56	57	3.128415	TCTTGGATGTGTGTGTTGTGTTG	59.872	43.478	0.00	0.00	0.00	3.33
57	58	1.747924	TGGATGTGTGTGTTGTGTTGG	59.252	47.619	0.00	0.00	0.00	3.77
58	59	1.535860	GGATGTGTGTGTTGTGTTGGC	60.536	52.381	0.00	0.00	0.00	4.52
59	60	1.133982	GATGTGTGTGTTGTGTTGGCA	59.866	47.619	0.00	0.00	0.00	4.92
60	61	1.180907	TGTGTGTGTTGTGTTGGCAT	58.819	45.000	0.00	0.00	0.00	4.40
61	62	1.135170	TGTGTGTGTTGTGTTGGCATG	60.135	47.619	0.00	0.00	0.00	4.06
62	63	0.179116	TGTGTGTTGTGTTGGCATGC	60.179	50.000	9.90	9.90	0.00	4.06
63	64	1.065436	TGTGTTGTGTTGGCATGCG	59.935	52.632	12.44	0.00	0.00	4.73
64	65	1.065600	GTGTTGTGTTGGCATGCGT	59.934	52.632	12.44	0.00	0.00	5.24
65	66	0.527385	GTGTTGTGTTGGCATGCGTT	60.527	50.000	12.44	0.00	0.00	4.84
66	67	0.174389	TGTTGTGTTGGCATGCGTTT	59.826	45.000	12.44	0.00	0.00	3.60
67	68	1.405463	TGTTGTGTTGGCATGCGTTTA	59.595	42.857	12.44	0.00	0.00	2.01
68	69	2.035193	TGTTGTGTTGGCATGCGTTTAT	59.965	40.909	12.44	0.00	0.00	1.40
69	70	3.253432	TGTTGTGTTGGCATGCGTTTATA	59.747	39.130	12.44	0.00	0.00	0.98
70	71	3.479505	TGTGTTGGCATGCGTTTATAC	57.520	42.857	12.44	6.55	0.00	1.47
71	72	2.162608	TGTGTTGGCATGCGTTTATACC	59.837	45.455	12.44	0.00	0.00	2.73
72	73	1.398739	TGTTGGCATGCGTTTATACCG	59.601	47.619	12.44	0.00	0.00	4.02
73	74	1.018148	TTGGCATGCGTTTATACCGG	58.982	50.000	12.44	0.00	0.00	5.28
74	75	0.816018	TGGCATGCGTTTATACCGGG	60.816	55.000	12.44	0.00	0.00	5.73
75	76	0.816421	GGCATGCGTTTATACCGGGT	60.816	55.000	12.44	4.46	0.00	5.28
76	77	1.018910	GCATGCGTTTATACCGGGTT	58.981	50.000	4.31	0.00	0.00	4.11
77	78	2.211806	GCATGCGTTTATACCGGGTTA	58.788	47.619	4.31	0.00	0.00	2.85
78	79	2.809696	GCATGCGTTTATACCGGGTTAT	59.190	45.455	4.31	0.00	0.00	1.89
79	80	3.251487	GCATGCGTTTATACCGGGTTATT	59.749	43.478	4.31	0.00	0.00	1.40
80	81	4.451774	GCATGCGTTTATACCGGGTTATTA	59.548	41.667	4.31	0.00	0.00	0.98
81	82	5.049543	GCATGCGTTTATACCGGGTTATTAA	60.050	40.000	4.31	0.00	0.00	1.40
82	83	6.348704	GCATGCGTTTATACCGGGTTATTAAT	60.349	38.462	4.31	0.00	0.00	1.40
83	84	6.542574	TGCGTTTATACCGGGTTATTAATG	57.457	37.500	4.31	2.71	0.00	1.90
84	85	6.286758	TGCGTTTATACCGGGTTATTAATGA	58.713	36.000	4.31	0.00	0.00	2.57
85	86	6.935771	TGCGTTTATACCGGGTTATTAATGAT	59.064	34.615	4.31	0.00	0.00	2.45
86	87	8.093307	TGCGTTTATACCGGGTTATTAATGATA	58.907	33.333	4.31	0.00	0.00	2.15
87	88	9.101655	GCGTTTATACCGGGTTATTAATGATAT	57.898	33.333	4.31	0.00	0.00	1.63
114	115	6.730960	CTTTATATATAAAGCGGGGCGAAA	57.269	37.500	25.10	1.66	41.69	3.46
115	116	6.730960	TTTATATATAAAGCGGGGCGAAAG	57.269	37.500	12.90	0.00	0.00	2.62
116	117	2.632987	ATATAAAGCGGGGCGAAAGT	57.367	45.000	0.00	0.00	0.00	2.66
117	118	2.406596	TATAAAGCGGGGCGAAAGTT	57.593	45.000	0.00	0.00	0.00	2.66
118	119	1.541379	ATAAAGCGGGGCGAAAGTTT	58.459	45.000	0.00	0.00	0.00	2.66
119	120	1.320507	TAAAGCGGGGCGAAAGTTTT	58.679	45.000	0.00	0.00	0.00	2.43
120	121	0.462375	AAAGCGGGGCGAAAGTTTTT	59.538	45.000	0.00	0.00	0.00	1.94
145	146	8.635765	TTTTGGTAAAGCATAGATATCCCATC	57.364	34.615	0.00	0.00	0.00	3.51
146	147	6.950860	TGGTAAAGCATAGATATCCCATCA	57.049	37.500	0.00	0.00	0.00	3.07
147	148	7.515004	TGGTAAAGCATAGATATCCCATCAT	57.485	36.000	0.00	0.00	0.00	2.45
148	149	7.932134	TGGTAAAGCATAGATATCCCATCATT	58.068	34.615	0.00	0.00	0.00	2.57
149	150	8.393259	TGGTAAAGCATAGATATCCCATCATTT	58.607	33.333	0.00	0.00	0.00	2.32
150	151	9.247861	GGTAAAGCATAGATATCCCATCATTTT	57.752	33.333	0.00	0.00	0.00	1.82
153	154	9.597681	AAAGCATAGATATCCCATCATTTTTCT	57.402	29.630	0.00	0.00	0.00	2.52
154	155	8.804912	AGCATAGATATCCCATCATTTTTCTC	57.195	34.615	0.00	0.00	0.00	2.87
155	156	8.613034	AGCATAGATATCCCATCATTTTTCTCT	58.387	33.333	0.00	0.00	0.00	3.10
156	157	9.896645	GCATAGATATCCCATCATTTTTCTCTA	57.103	33.333	0.00	0.00	0.00	2.43
160	161	9.163894	AGATATCCCATCATTTTTCTCTAGTCA	57.836	33.333	0.00	0.00	0.00	3.41
161	162	9.956640	GATATCCCATCATTTTTCTCTAGTCAT	57.043	33.333	0.00	0.00	0.00	3.06
176	177	8.975663	TCTCTAGTCATAATTAGTTTCGAGGA	57.024	34.615	0.00	0.00	0.00	3.71
177	178	9.058174	TCTCTAGTCATAATTAGTTTCGAGGAG	57.942	37.037	0.00	0.00	0.00	3.69
178	179	8.749026	TCTAGTCATAATTAGTTTCGAGGAGT	57.251	34.615	0.00	0.00	0.00	3.85
179	180	9.842775	TCTAGTCATAATTAGTTTCGAGGAGTA	57.157	33.333	0.00	0.00	0.00	2.59
182	183	9.751542	AGTCATAATTAGTTTCGAGGAGTAATG	57.248	33.333	10.11	3.20	0.00	1.90
183	184	9.530633	GTCATAATTAGTTTCGAGGAGTAATGT	57.469	33.333	10.11	5.68	0.00	2.71
191	192	8.749026	AGTTTCGAGGAGTAATGTTATCTAGA	57.251	34.615	0.00	0.00	0.00	2.43
192	193	9.357161	AGTTTCGAGGAGTAATGTTATCTAGAT	57.643	33.333	10.73	10.73	0.00	1.98
193	194	9.968870	GTTTCGAGGAGTAATGTTATCTAGATT	57.031	33.333	11.25	0.00	0.00	2.40
194	195	9.967346	TTTCGAGGAGTAATGTTATCTAGATTG	57.033	33.333	11.25	0.00	0.00	2.67
195	196	7.594714	TCGAGGAGTAATGTTATCTAGATTGC	58.405	38.462	11.25	5.00	0.00	3.56
196	197	6.524933	CGAGGAGTAATGTTATCTAGATTGCG	59.475	42.308	11.25	0.00	0.00	4.85
197	198	7.291411	AGGAGTAATGTTATCTAGATTGCGT	57.709	36.000	11.25	3.03	0.00	5.24
198	199	7.148641	AGGAGTAATGTTATCTAGATTGCGTG	58.851	38.462	11.25	0.00	0.00	5.34
199	200	7.014326	AGGAGTAATGTTATCTAGATTGCGTGA	59.986	37.037	11.25	0.00	0.00	4.35
200	201	7.652105	GGAGTAATGTTATCTAGATTGCGTGAA	59.348	37.037	11.25	0.00	0.00	3.18
201	202	8.942338	AGTAATGTTATCTAGATTGCGTGAAA	57.058	30.769	11.25	0.00	0.00	2.69
202	203	8.818057	AGTAATGTTATCTAGATTGCGTGAAAC	58.182	33.333	11.25	7.84	0.00	2.78
203	204	7.609760	AATGTTATCTAGATTGCGTGAAACA	57.390	32.000	11.25	13.15	35.74	2.83
204	205	6.403333	TGTTATCTAGATTGCGTGAAACAC	57.597	37.500	11.25	0.00	35.74	3.32
205	206	6.163476	TGTTATCTAGATTGCGTGAAACACT	58.837	36.000	11.25	0.00	35.74	3.55
206	207	6.090763	TGTTATCTAGATTGCGTGAAACACTG	59.909	38.462	11.25	0.00	35.74	3.66
207	208	2.736721	TCTAGATTGCGTGAAACACTGC	59.263	45.455	0.00	0.00	35.74	4.40
208	209	1.597742	AGATTGCGTGAAACACTGCT	58.402	45.000	15.01	2.34	35.74	4.24
209	210	1.265095	AGATTGCGTGAAACACTGCTG	59.735	47.619	15.01	0.00	35.74	4.41
210	211	1.002468	GATTGCGTGAAACACTGCTGT	60.002	47.619	15.01	0.00	35.74	4.40
227	228	3.536164	TGCCTTTGCACCCAAGTG	58.464	55.556	0.00	0.00	44.23	3.16
235	236	3.749981	CACCCAAGTGCACTGGAC	58.250	61.111	25.67	0.00	37.14	4.02
236	237	1.152984	CACCCAAGTGCACTGGACA	60.153	57.895	25.67	0.00	37.14	4.02
237	238	0.751277	CACCCAAGTGCACTGGACAA	60.751	55.000	25.67	0.00	37.14	3.18
238	239	0.466189	ACCCAAGTGCACTGGACAAG	60.466	55.000	25.67	15.40	0.00	3.16
239	240	1.656441	CCAAGTGCACTGGACAAGC	59.344	57.895	23.44	0.00	0.00	4.01
240	241	1.656441	CAAGTGCACTGGACAAGCC	59.344	57.895	22.49	0.00	37.10	4.35
241	242	0.820891	CAAGTGCACTGGACAAGCCT	60.821	55.000	22.49	0.00	37.63	4.58
242	243	0.106519	AAGTGCACTGGACAAGCCTT	60.107	50.000	22.49	0.00	37.63	4.35
243	244	0.820891	AGTGCACTGGACAAGCCTTG	60.821	55.000	20.97	2.11	37.63	3.61
244	245	2.195567	TGCACTGGACAAGCCTTGC	61.196	57.895	3.88	0.00	43.04	4.01
245	246	1.900498	GCACTGGACAAGCCTTGCT	60.900	57.895	3.88	0.00	40.91	3.91
260	261	6.405278	AGCCTTGCTTGTATTTGTAACTTT	57.595	33.333	0.00	0.00	33.89	2.66
261	262	6.447162	AGCCTTGCTTGTATTTGTAACTTTC	58.553	36.000	0.00	0.00	33.89	2.62
262	263	6.040391	AGCCTTGCTTGTATTTGTAACTTTCA	59.960	34.615	0.00	0.00	33.89	2.69
263	264	6.868339	GCCTTGCTTGTATTTGTAACTTTCAT	59.132	34.615	0.00	0.00	0.00	2.57
264	265	7.062255	GCCTTGCTTGTATTTGTAACTTTCATC	59.938	37.037	0.00	0.00	0.00	2.92
265	266	8.081633	CCTTGCTTGTATTTGTAACTTTCATCA	58.918	33.333	0.00	0.00	0.00	3.07
266	267	9.121517	CTTGCTTGTATTTGTAACTTTCATCAG	57.878	33.333	0.00	0.00	0.00	2.90
267	268	7.592938	TGCTTGTATTTGTAACTTTCATCAGG	58.407	34.615	0.00	0.00	0.00	3.86
268	269	6.528072	GCTTGTATTTGTAACTTTCATCAGGC	59.472	38.462	0.00	0.00	0.00	4.85
269	270	6.509418	TGTATTTGTAACTTTCATCAGGCC	57.491	37.500	0.00	0.00	0.00	5.19
270	271	6.245408	TGTATTTGTAACTTTCATCAGGCCT	58.755	36.000	0.00	0.00	0.00	5.19
271	272	6.719370	TGTATTTGTAACTTTCATCAGGCCTT	59.281	34.615	0.00	0.00	0.00	4.35
272	273	5.452078	TTTGTAACTTTCATCAGGCCTTG	57.548	39.130	0.00	0.00	0.00	3.61
273	274	3.420893	TGTAACTTTCATCAGGCCTTGG	58.579	45.455	0.00	0.00	0.00	3.61
274	275	1.260544	AACTTTCATCAGGCCTTGGC	58.739	50.000	0.00	2.49	0.00	4.52
275	276	0.613012	ACTTTCATCAGGCCTTGGCC	60.613	55.000	22.29	22.29	0.00	5.36
276	277	0.324091	CTTTCATCAGGCCTTGGCCT	60.324	55.000	26.23	26.23	41.53	5.19
277	278	0.998928	TTTCATCAGGCCTTGGCCTA	59.001	50.000	30.31	19.26	38.27	3.93
278	279	1.225373	TTCATCAGGCCTTGGCCTAT	58.775	50.000	30.31	20.43	38.27	2.57
279	280	1.225373	TCATCAGGCCTTGGCCTATT	58.775	50.000	30.31	18.56	38.27	1.73
280	281	1.570501	TCATCAGGCCTTGGCCTATTT	59.429	47.619	30.31	16.23	38.27	1.40
281	282	1.959282	CATCAGGCCTTGGCCTATTTC	59.041	52.381	30.31	4.12	38.27	2.17
282	283	0.107214	TCAGGCCTTGGCCTATTTCG	60.107	55.000	30.31	18.62	38.27	3.46
283	284	0.107214	CAGGCCTTGGCCTATTTCGA	60.107	55.000	30.31	0.00	38.27	3.71
284	285	0.623723	AGGCCTTGGCCTATTTCGAA	59.376	50.000	29.89	0.00	38.61	3.71
285	286	1.005450	AGGCCTTGGCCTATTTCGAAA	59.995	47.619	29.89	13.91	38.61	3.46
286	287	2.031870	GGCCTTGGCCTATTTCGAAAT	58.968	47.619	25.48	25.48	0.00	2.17
287	288	3.117663	AGGCCTTGGCCTATTTCGAAATA	60.118	43.478	29.89	25.03	38.61	1.40
288	289	3.826729	GGCCTTGGCCTATTTCGAAATAT	59.173	43.478	26.39	9.84	31.03	1.28
289	290	5.007682	GGCCTTGGCCTATTTCGAAATATA	58.992	41.667	26.39	11.38	31.03	0.86
290	291	5.475564	GGCCTTGGCCTATTTCGAAATATAA	59.524	40.000	26.39	18.16	31.03	0.98
291	292	6.349363	GGCCTTGGCCTATTTCGAAATATAAG	60.349	42.308	26.39	23.63	31.03	1.73
292	293	6.349363	GCCTTGGCCTATTTCGAAATATAAGG	60.349	42.308	30.50	30.50	34.71	2.69
293	294	6.715264	CCTTGGCCTATTTCGAAATATAAGGT	59.285	38.462	28.85	14.56	31.60	3.50
294	295	7.094762	CCTTGGCCTATTTCGAAATATAAGGTC	60.095	40.741	28.85	27.59	30.50	3.85
295	296	5.929992	TGGCCTATTTCGAAATATAAGGTCG	59.070	40.000	26.25	16.30	31.80	4.79
296	297	5.350640	GGCCTATTTCGAAATATAAGGTCGG	59.649	44.000	27.30	23.04	35.51	4.79
297	298	5.163884	GCCTATTTCGAAATATAAGGTCGGC	60.164	44.000	27.30	26.70	35.51	5.54
298	299	5.929992	CCTATTTCGAAATATAAGGTCGGCA	59.070	40.000	26.39	6.28	35.51	5.69
299	300	5.924475	ATTTCGAAATATAAGGTCGGCAG	57.076	39.130	21.55	0.00	35.51	4.85
300	301	4.395959	TTCGAAATATAAGGTCGGCAGT	57.604	40.909	0.00	0.00	35.51	4.40
301	302	4.395959	TCGAAATATAAGGTCGGCAGTT	57.604	40.909	0.00	0.00	35.51	3.16
302	303	5.518848	TCGAAATATAAGGTCGGCAGTTA	57.481	39.130	0.00	0.00	35.51	2.24
303	304	5.526115	TCGAAATATAAGGTCGGCAGTTAG	58.474	41.667	0.00	0.00	35.51	2.34
304	305	4.150098	CGAAATATAAGGTCGGCAGTTAGC	59.850	45.833	0.00	0.00	44.65	3.09
315	316	2.997485	GCAGTTAGCCACCTTCTTTG	57.003	50.000	0.00	0.00	37.23	2.77
316	317	2.230660	GCAGTTAGCCACCTTCTTTGT	58.769	47.619	0.00	0.00	37.23	2.83
317	318	2.623416	GCAGTTAGCCACCTTCTTTGTT	59.377	45.455	0.00	0.00	37.23	2.83
318	319	3.068165	GCAGTTAGCCACCTTCTTTGTTT	59.932	43.478	0.00	0.00	37.23	2.83
319	320	4.793028	GCAGTTAGCCACCTTCTTTGTTTC	60.793	45.833	0.00	0.00	37.23	2.78
320	321	4.338118	CAGTTAGCCACCTTCTTTGTTTCA	59.662	41.667	0.00	0.00	0.00	2.69
321	322	4.953579	AGTTAGCCACCTTCTTTGTTTCAA	59.046	37.500	0.00	0.00	0.00	2.69
322	323	5.420739	AGTTAGCCACCTTCTTTGTTTCAAA	59.579	36.000	0.00	0.00	0.00	2.69
323	324	4.817318	AGCCACCTTCTTTGTTTCAAAA	57.183	36.364	0.00	0.00	0.00	2.44
324	325	5.357742	AGCCACCTTCTTTGTTTCAAAAT	57.642	34.783	0.00	0.00	0.00	1.82
325	326	6.478512	AGCCACCTTCTTTGTTTCAAAATA	57.521	33.333	0.00	0.00	0.00	1.40
326	327	6.883744	AGCCACCTTCTTTGTTTCAAAATAA	58.116	32.000	0.00	0.00	0.00	1.40
327	328	7.334858	AGCCACCTTCTTTGTTTCAAAATAAA	58.665	30.769	0.00	0.00	0.00	1.40
328	329	7.992608	AGCCACCTTCTTTGTTTCAAAATAAAT	59.007	29.630	0.00	0.00	30.40	1.40
329	330	9.267084	GCCACCTTCTTTGTTTCAAAATAAATA	57.733	29.630	0.00	0.00	30.40	1.40
365	366	7.928908	TTCAAACAAATTGTATTGTCTCTGC	57.071	32.000	0.00	0.00	42.49	4.26
366	367	7.036996	TCAAACAAATTGTATTGTCTCTGCA	57.963	32.000	0.00	0.00	42.49	4.41
367	368	7.140705	TCAAACAAATTGTATTGTCTCTGCAG	58.859	34.615	7.63	7.63	42.49	4.41
368	369	6.639632	AACAAATTGTATTGTCTCTGCAGT	57.360	33.333	14.67	0.00	42.49	4.40
369	370	6.639632	ACAAATTGTATTGTCTCTGCAGTT	57.360	33.333	14.67	0.00	39.23	3.16
370	371	7.042797	ACAAATTGTATTGTCTCTGCAGTTT	57.957	32.000	14.67	0.00	39.23	2.66
371	372	7.141363	ACAAATTGTATTGTCTCTGCAGTTTC	58.859	34.615	14.67	5.78	39.23	2.78
372	373	6.882610	AATTGTATTGTCTCTGCAGTTTCA	57.117	33.333	14.67	8.36	0.00	2.69
373	374	6.882610	ATTGTATTGTCTCTGCAGTTTCAA	57.117	33.333	14.67	16.15	0.00	2.69
374	375	5.929697	TGTATTGTCTCTGCAGTTTCAAG	57.070	39.130	14.67	3.05	0.00	3.02
375	376	5.368145	TGTATTGTCTCTGCAGTTTCAAGT	58.632	37.500	14.67	9.48	0.00	3.16
376	377	5.466728	TGTATTGTCTCTGCAGTTTCAAGTC	59.533	40.000	14.67	12.96	0.00	3.01
377	378	3.541996	TGTCTCTGCAGTTTCAAGTCA	57.458	42.857	14.67	4.45	0.00	3.41
378	379	4.077300	TGTCTCTGCAGTTTCAAGTCAT	57.923	40.909	14.67	0.00	0.00	3.06
379	380	5.213891	TGTCTCTGCAGTTTCAAGTCATA	57.786	39.130	14.67	0.00	0.00	2.15
380	381	4.991056	TGTCTCTGCAGTTTCAAGTCATAC	59.009	41.667	14.67	0.00	0.00	2.39
381	382	4.390297	GTCTCTGCAGTTTCAAGTCATACC	59.610	45.833	14.67	0.00	0.00	2.73
382	383	4.284490	TCTCTGCAGTTTCAAGTCATACCT	59.716	41.667	14.67	0.00	0.00	3.08
383	384	5.480422	TCTCTGCAGTTTCAAGTCATACCTA	59.520	40.000	14.67	0.00	0.00	3.08
384	385	6.155221	TCTCTGCAGTTTCAAGTCATACCTAT	59.845	38.462	14.67	0.00	0.00	2.57
385	386	6.711277	TCTGCAGTTTCAAGTCATACCTATT	58.289	36.000	14.67	0.00	0.00	1.73
386	387	7.847096	TCTGCAGTTTCAAGTCATACCTATTA	58.153	34.615	14.67	0.00	0.00	0.98
387	388	8.486210	TCTGCAGTTTCAAGTCATACCTATTAT	58.514	33.333	14.67	0.00	0.00	1.28
388	389	8.437360	TGCAGTTTCAAGTCATACCTATTATG	57.563	34.615	0.00	0.00	39.31	1.90
389	390	8.046708	TGCAGTTTCAAGTCATACCTATTATGT	58.953	33.333	0.00	0.00	39.05	2.29
390	391	9.542462	GCAGTTTCAAGTCATACCTATTATGTA	57.458	33.333	0.00	0.00	39.05	2.29
416	417	9.865321	AAATTGAATTAATCTGTGATTGGACAG	57.135	29.630	3.35	0.00	44.14	3.51
417	418	8.585471	ATTGAATTAATCTGTGATTGGACAGT	57.415	30.769	0.00	0.00	43.38	3.55
418	419	8.408043	TTGAATTAATCTGTGATTGGACAGTT	57.592	30.769	0.00	0.00	43.38	3.16
419	420	8.408043	TGAATTAATCTGTGATTGGACAGTTT	57.592	30.769	0.00	0.00	43.38	2.66
420	421	8.859090	TGAATTAATCTGTGATTGGACAGTTTT	58.141	29.630	0.00	0.00	43.38	2.43
421	422	9.696917	GAATTAATCTGTGATTGGACAGTTTTT	57.303	29.630	0.00	0.00	43.38	1.94
427	428	8.870160	TCTGTGATTGGACAGTTTTTATTTTG	57.130	30.769	0.00	0.00	43.38	2.44
428	429	7.437862	TCTGTGATTGGACAGTTTTTATTTTGC	59.562	33.333	0.00	0.00	43.38	3.68
429	430	6.199908	TGTGATTGGACAGTTTTTATTTTGCG	59.800	34.615	0.00	0.00	0.00	4.85
430	431	5.694006	TGATTGGACAGTTTTTATTTTGCGG	59.306	36.000	0.00	0.00	0.00	5.69
431	432	3.385577	TGGACAGTTTTTATTTTGCGGC	58.614	40.909	0.00	0.00	0.00	6.53
432	433	3.181475	TGGACAGTTTTTATTTTGCGGCA	60.181	39.130	0.00	0.00	0.00	5.69
433	434	3.183574	GGACAGTTTTTATTTTGCGGCAC	59.816	43.478	0.05	0.00	0.00	5.01
434	435	4.048504	GACAGTTTTTATTTTGCGGCACT	58.951	39.130	0.05	0.00	0.00	4.40
435	436	3.801594	ACAGTTTTTATTTTGCGGCACTG	59.198	39.130	0.05	6.03	37.11	3.66
436	437	3.801594	CAGTTTTTATTTTGCGGCACTGT	59.198	39.130	0.05	0.00	0.00	3.55
437	438	3.801594	AGTTTTTATTTTGCGGCACTGTG	59.198	39.130	0.05	2.76	0.00	3.66
438	439	3.717400	TTTTATTTTGCGGCACTGTGA	57.283	38.095	12.86	0.00	0.00	3.58
439	440	3.932545	TTTATTTTGCGGCACTGTGAT	57.067	38.095	12.86	0.00	0.00	3.06
440	441	3.932545	TTATTTTGCGGCACTGTGATT	57.067	38.095	12.86	0.00	0.00	2.57
441	442	2.068837	ATTTTGCGGCACTGTGATTG	57.931	45.000	12.86	0.92	0.00	2.67
442	443	0.031857	TTTTGCGGCACTGTGATTGG	59.968	50.000	12.86	0.00	0.00	3.16
443	444	0.821301	TTTGCGGCACTGTGATTGGA	60.821	50.000	12.86	0.00	0.00	3.53
444	445	0.608856	TTGCGGCACTGTGATTGGAT	60.609	50.000	12.86	0.00	0.00	3.41
445	446	0.251634	TGCGGCACTGTGATTGGATA	59.748	50.000	12.86	0.00	0.00	2.59
446	447	0.940126	GCGGCACTGTGATTGGATAG	59.060	55.000	12.86	0.00	0.00	2.08
447	448	1.743772	GCGGCACTGTGATTGGATAGT	60.744	52.381	12.86	0.00	0.00	2.12
448	449	2.632377	CGGCACTGTGATTGGATAGTT	58.368	47.619	12.86	0.00	0.00	2.24
449	450	3.792401	CGGCACTGTGATTGGATAGTTA	58.208	45.455	12.86	0.00	0.00	2.24
450	451	3.804325	CGGCACTGTGATTGGATAGTTAG	59.196	47.826	12.86	0.00	0.00	2.34
451	452	4.130118	GGCACTGTGATTGGATAGTTAGG	58.870	47.826	12.86	0.00	0.00	2.69
452	453	4.141711	GGCACTGTGATTGGATAGTTAGGA	60.142	45.833	12.86	0.00	0.00	2.94
453	454	5.053145	GCACTGTGATTGGATAGTTAGGAG	58.947	45.833	12.86	0.00	0.00	3.69
454	455	5.605534	CACTGTGATTGGATAGTTAGGAGG	58.394	45.833	0.32	0.00	0.00	4.30
455	456	5.363868	CACTGTGATTGGATAGTTAGGAGGA	59.636	44.000	0.32	0.00	0.00	3.71
456	457	5.364157	ACTGTGATTGGATAGTTAGGAGGAC	59.636	44.000	0.00	0.00	0.00	3.85
457	458	5.277250	TGTGATTGGATAGTTAGGAGGACA	58.723	41.667	0.00	0.00	0.00	4.02
458	459	5.363868	TGTGATTGGATAGTTAGGAGGACAG	59.636	44.000	0.00	0.00	0.00	3.51
459	460	5.364157	GTGATTGGATAGTTAGGAGGACAGT	59.636	44.000	0.00	0.00	0.00	3.55
460	461	5.363868	TGATTGGATAGTTAGGAGGACAGTG	59.636	44.000	0.00	0.00	0.00	3.66
461	462	3.031736	TGGATAGTTAGGAGGACAGTGC	58.968	50.000	0.00	0.00	0.00	4.40
462	463	3.301274	GGATAGTTAGGAGGACAGTGCT	58.699	50.000	0.00	0.00	0.00	4.40
463	464	3.707102	GGATAGTTAGGAGGACAGTGCTT	59.293	47.826	0.00	0.00	0.00	3.91
464	465	4.202172	GGATAGTTAGGAGGACAGTGCTTC	60.202	50.000	0.00	0.00	0.00	3.86
465	466	1.903183	AGTTAGGAGGACAGTGCTTCC	59.097	52.381	0.00	7.38	0.00	3.46
466	467	1.623811	GTTAGGAGGACAGTGCTTCCA	59.376	52.381	14.87	0.00	35.33	3.53
467	468	1.561643	TAGGAGGACAGTGCTTCCAG	58.438	55.000	14.87	0.00	35.33	3.86
468	469	1.376553	GGAGGACAGTGCTTCCAGC	60.377	63.158	0.00	0.00	42.82	4.85
469	470	1.376553	GAGGACAGTGCTTCCAGCC	60.377	63.158	0.00	0.00	41.51	4.85
470	471	1.835927	GAGGACAGTGCTTCCAGCCT	61.836	60.000	0.00	0.00	41.51	4.58
471	472	0.545309	AGGACAGTGCTTCCAGCCTA	60.545	55.000	2.84	0.00	41.51	3.93
472	473	0.324943	GGACAGTGCTTCCAGCCTAA	59.675	55.000	0.00	0.00	41.51	2.69
473	474	1.065126	GGACAGTGCTTCCAGCCTAAT	60.065	52.381	0.00	0.00	41.51	1.73
474	475	2.170607	GGACAGTGCTTCCAGCCTAATA	59.829	50.000	0.00	0.00	41.51	0.98
475	476	3.370527	GGACAGTGCTTCCAGCCTAATAA	60.371	47.826	0.00	0.00	41.51	1.40
476	477	4.261801	GACAGTGCTTCCAGCCTAATAAA	58.738	43.478	0.00	0.00	41.51	1.40
477	478	4.265073	ACAGTGCTTCCAGCCTAATAAAG	58.735	43.478	0.00	0.00	41.51	1.85
478	479	4.263506	ACAGTGCTTCCAGCCTAATAAAGT	60.264	41.667	0.00	0.00	41.51	2.66
479	480	4.702131	CAGTGCTTCCAGCCTAATAAAGTT	59.298	41.667	0.00	0.00	41.51	2.66
480	481	5.183904	CAGTGCTTCCAGCCTAATAAAGTTT	59.816	40.000	0.00	0.00	41.51	2.66
481	482	6.374333	CAGTGCTTCCAGCCTAATAAAGTTTA	59.626	38.462	0.00	0.00	41.51	2.01
482	483	6.946009	AGTGCTTCCAGCCTAATAAAGTTTAA	59.054	34.615	0.00	0.00	41.51	1.52
483	484	7.615757	AGTGCTTCCAGCCTAATAAAGTTTAAT	59.384	33.333	0.00	0.00	41.51	1.40
484	485	8.251026	GTGCTTCCAGCCTAATAAAGTTTAATT	58.749	33.333	0.00	0.00	41.51	1.40
485	486	8.811994	TGCTTCCAGCCTAATAAAGTTTAATTT	58.188	29.630	0.00	0.00	41.51	1.82
486	487	9.653287	GCTTCCAGCCTAATAAAGTTTAATTTT	57.347	29.630	0.00	0.00	34.48	1.82
510	511	9.683069	TTTTAGACTTGAGATTGCTGATTTTTC	57.317	29.630	0.00	0.00	0.00	2.29
511	512	8.627208	TTAGACTTGAGATTGCTGATTTTTCT	57.373	30.769	0.00	0.00	0.00	2.52
512	513	6.910995	AGACTTGAGATTGCTGATTTTTCTG	58.089	36.000	0.00	0.00	0.00	3.02
513	514	6.713903	AGACTTGAGATTGCTGATTTTTCTGA	59.286	34.615	0.00	0.00	0.00	3.27
514	515	7.230108	AGACTTGAGATTGCTGATTTTTCTGAA	59.770	33.333	0.00	0.00	0.00	3.02
515	516	7.893658	ACTTGAGATTGCTGATTTTTCTGAAT	58.106	30.769	0.00	0.00	0.00	2.57
516	517	8.365647	ACTTGAGATTGCTGATTTTTCTGAATT	58.634	29.630	0.00	0.00	0.00	2.17
517	518	9.204570	CTTGAGATTGCTGATTTTTCTGAATTT	57.795	29.630	0.00	0.00	0.00	1.82
541	542	8.746922	TTATTTCAGACTTTTTGATGATGTGC	57.253	30.769	0.00	0.00	0.00	4.57
542	543	4.408993	TCAGACTTTTTGATGATGTGCG	57.591	40.909	0.00	0.00	0.00	5.34
543	544	2.912967	CAGACTTTTTGATGATGTGCGC	59.087	45.455	0.00	0.00	0.00	6.09
544	545	2.816087	AGACTTTTTGATGATGTGCGCT	59.184	40.909	9.73	0.00	0.00	5.92
545	546	3.120060	AGACTTTTTGATGATGTGCGCTC	60.120	43.478	9.73	5.51	0.00	5.03
546	547	2.553602	ACTTTTTGATGATGTGCGCTCA	59.446	40.909	15.29	15.29	0.00	4.26
547	548	2.905959	TTTTGATGATGTGCGCTCAG	57.094	45.000	17.93	0.00	0.00	3.35
548	549	1.812235	TTTGATGATGTGCGCTCAGT	58.188	45.000	17.93	6.42	0.00	3.41
549	550	1.081094	TTGATGATGTGCGCTCAGTG	58.919	50.000	17.93	0.00	0.00	3.66
550	551	0.741927	TGATGATGTGCGCTCAGTGG	60.742	55.000	17.93	0.00	0.00	4.00
551	552	1.434622	GATGATGTGCGCTCAGTGGG	61.435	60.000	17.93	0.00	0.00	4.61
552	553	1.902765	ATGATGTGCGCTCAGTGGGA	61.903	55.000	17.93	0.30	0.00	4.37
553	554	1.812922	GATGTGCGCTCAGTGGGAG	60.813	63.158	17.93	0.00	46.93	4.30
554	555	3.320879	ATGTGCGCTCAGTGGGAGG	62.321	63.158	17.93	0.00	44.22	4.30
555	556	3.695606	GTGCGCTCAGTGGGAGGA	61.696	66.667	9.73	0.00	44.22	3.71
556	557	3.385384	TGCGCTCAGTGGGAGGAG	61.385	66.667	9.73	0.00	44.22	3.69
557	558	3.071206	GCGCTCAGTGGGAGGAGA	61.071	66.667	0.00	0.00	44.22	3.71
558	559	2.430610	GCGCTCAGTGGGAGGAGAT	61.431	63.158	0.00	0.00	44.22	2.75
559	560	1.440893	CGCTCAGTGGGAGGAGATG	59.559	63.158	0.00	0.00	44.22	2.90
560	561	1.326213	CGCTCAGTGGGAGGAGATGT	61.326	60.000	0.00	0.00	44.22	3.06
561	562	0.908198	GCTCAGTGGGAGGAGATGTT	59.092	55.000	0.00	0.00	44.22	2.71
562	563	1.134551	GCTCAGTGGGAGGAGATGTTC	60.135	57.143	0.00	0.00	44.22	3.18
570	571	4.808649	GGAGATGTTCCCGTCGAC	57.191	61.111	5.18	5.18	40.37	4.20
571	572	2.190756	GGAGATGTTCCCGTCGACT	58.809	57.895	14.70	0.00	40.37	4.18
572	573	1.386533	GGAGATGTTCCCGTCGACTA	58.613	55.000	14.70	0.00	40.37	2.59
573	574	1.955080	GGAGATGTTCCCGTCGACTAT	59.045	52.381	14.70	0.00	40.37	2.12
574	575	2.030981	GGAGATGTTCCCGTCGACTATC	60.031	54.545	14.70	7.63	40.37	2.08
575	576	2.617308	GAGATGTTCCCGTCGACTATCA	59.383	50.000	14.70	6.17	0.00	2.15
576	577	3.021695	AGATGTTCCCGTCGACTATCAA	58.978	45.455	14.70	0.00	0.00	2.57
577	578	2.933495	TGTTCCCGTCGACTATCAAG	57.067	50.000	14.70	0.00	0.00	3.02
578	579	2.439409	TGTTCCCGTCGACTATCAAGA	58.561	47.619	14.70	0.00	0.00	3.02
579	580	2.163010	TGTTCCCGTCGACTATCAAGAC	59.837	50.000	14.70	3.98	0.00	3.01
585	586	3.743567	GTCGACTATCAAGACGTCTGT	57.256	47.619	20.85	12.26	40.91	3.41
586	587	3.418094	GTCGACTATCAAGACGTCTGTG	58.582	50.000	20.85	18.26	40.91	3.66
587	588	2.418976	TCGACTATCAAGACGTCTGTGG	59.581	50.000	20.85	13.23	40.91	4.17
588	589	2.531206	GACTATCAAGACGTCTGTGGC	58.469	52.381	20.85	6.24	0.00	5.01
589	590	1.135373	ACTATCAAGACGTCTGTGGCG	60.135	52.381	20.85	10.56	0.00	5.69
590	591	1.132453	CTATCAAGACGTCTGTGGCGA	59.868	52.381	20.85	11.18	0.00	5.54
591	592	0.388649	ATCAAGACGTCTGTGGCGAC	60.389	55.000	20.85	0.00	0.00	5.19
592	593	1.007271	CAAGACGTCTGTGGCGACT	60.007	57.895	20.85	0.00	36.10	4.18
593	594	0.597637	CAAGACGTCTGTGGCGACTT	60.598	55.000	20.85	3.83	42.72	3.01
594	595	0.318784	AAGACGTCTGTGGCGACTTC	60.319	55.000	20.85	0.00	39.28	3.01
595	596	1.007734	GACGTCTGTGGCGACTTCA	60.008	57.895	8.70	0.00	33.74	3.02
596	597	0.388649	GACGTCTGTGGCGACTTCAT	60.389	55.000	8.70	0.00	33.74	2.57
597	598	0.667487	ACGTCTGTGGCGACTTCATG	60.667	55.000	0.00	0.00	0.00	3.07
598	599	0.388520	CGTCTGTGGCGACTTCATGA	60.389	55.000	0.00	0.00	0.00	3.07
599	600	1.795768	GTCTGTGGCGACTTCATGAA	58.204	50.000	8.12	8.12	0.00	2.57
600	601	2.350522	GTCTGTGGCGACTTCATGAAT	58.649	47.619	8.96	0.00	0.00	2.57
601	602	2.349886	GTCTGTGGCGACTTCATGAATC	59.650	50.000	8.96	8.01	0.00	2.52
602	603	2.234661	TCTGTGGCGACTTCATGAATCT	59.765	45.455	8.96	0.00	0.00	2.40
603	604	3.005554	CTGTGGCGACTTCATGAATCTT	58.994	45.455	8.96	0.00	0.00	2.40
604	605	4.081697	TCTGTGGCGACTTCATGAATCTTA	60.082	41.667	8.96	0.00	0.00	2.10
605	606	4.574892	TGTGGCGACTTCATGAATCTTAA	58.425	39.130	8.96	0.00	0.00	1.85
606	607	4.631377	TGTGGCGACTTCATGAATCTTAAG	59.369	41.667	8.96	0.00	0.00	1.85
607	608	4.870426	GTGGCGACTTCATGAATCTTAAGA	59.130	41.667	8.96	7.82	0.00	2.10
608	609	5.525378	GTGGCGACTTCATGAATCTTAAGAT	59.475	40.000	12.37	12.37	36.07	2.40
609	610	5.525012	TGGCGACTTCATGAATCTTAAGATG	59.475	40.000	18.61	8.02	34.49	2.90
610	611	5.755375	GGCGACTTCATGAATCTTAAGATGA	59.245	40.000	18.61	10.27	34.49	2.92
611	612	6.426328	GGCGACTTCATGAATCTTAAGATGAT	59.574	38.462	18.61	10.89	34.49	2.45
612	613	7.289395	GCGACTTCATGAATCTTAAGATGATG	58.711	38.462	18.61	20.42	34.49	3.07
613	614	7.042187	GCGACTTCATGAATCTTAAGATGATGT	60.042	37.037	24.10	21.31	36.47	3.06
614	615	9.468532	CGACTTCATGAATCTTAAGATGATGTA	57.531	33.333	24.10	18.46	34.88	2.29
616	617	9.553064	ACTTCATGAATCTTAAGATGATGTACC	57.447	33.333	24.10	10.25	33.69	3.34
617	618	8.593492	TTCATGAATCTTAAGATGATGTACCG	57.407	34.615	24.10	10.10	34.49	4.02
618	619	7.154656	TCATGAATCTTAAGATGATGTACCGG	58.845	38.462	24.10	0.00	34.49	5.28
619	620	5.297547	TGAATCTTAAGATGATGTACCGGC	58.702	41.667	18.61	0.00	34.49	6.13
620	621	5.070446	TGAATCTTAAGATGATGTACCGGCT	59.930	40.000	18.61	0.00	34.49	5.52
621	622	4.585955	TCTTAAGATGATGTACCGGCTC	57.414	45.455	0.00	0.00	0.00	4.70
622	623	3.958147	TCTTAAGATGATGTACCGGCTCA	59.042	43.478	0.00	0.35	0.00	4.26
623	624	2.898729	AAGATGATGTACCGGCTCAG	57.101	50.000	0.00	0.00	0.00	3.35
624	625	1.781786	AGATGATGTACCGGCTCAGT	58.218	50.000	0.00	0.00	0.00	3.41
625	626	1.683917	AGATGATGTACCGGCTCAGTC	59.316	52.381	0.00	1.66	0.00	3.51
626	627	1.683917	GATGATGTACCGGCTCAGTCT	59.316	52.381	0.00	0.00	0.00	3.24
627	628	1.557099	TGATGTACCGGCTCAGTCTT	58.443	50.000	0.00	0.00	0.00	3.01
628	629	1.899814	TGATGTACCGGCTCAGTCTTT	59.100	47.619	0.00	0.00	0.00	2.52
629	630	2.094182	TGATGTACCGGCTCAGTCTTTC	60.094	50.000	0.00	0.00	0.00	2.62
630	631	1.334160	TGTACCGGCTCAGTCTTTCA	58.666	50.000	0.00	0.00	0.00	2.69
631	632	1.689813	TGTACCGGCTCAGTCTTTCAA	59.310	47.619	0.00	0.00	0.00	2.69
632	633	2.103432	TGTACCGGCTCAGTCTTTCAAA	59.897	45.455	0.00	0.00	0.00	2.69
633	634	2.341846	ACCGGCTCAGTCTTTCAAAA	57.658	45.000	0.00	0.00	0.00	2.44
634	635	2.222027	ACCGGCTCAGTCTTTCAAAAG	58.778	47.619	0.00	0.00	37.36	2.27
635	636	2.158813	ACCGGCTCAGTCTTTCAAAAGA	60.159	45.455	0.00	1.06	42.41	2.52
636	637	2.481952	CCGGCTCAGTCTTTCAAAAGAG	59.518	50.000	5.45	0.00	45.01	2.85
637	638	3.134458	CGGCTCAGTCTTTCAAAAGAGT	58.866	45.455	5.45	6.25	46.72	3.24
638	639	3.561725	CGGCTCAGTCTTTCAAAAGAGTT	59.438	43.478	9.58	0.00	44.17	3.01
639	640	4.319118	CGGCTCAGTCTTTCAAAAGAGTTC	60.319	45.833	9.58	3.80	44.17	3.01
640	641	4.576463	GGCTCAGTCTTTCAAAAGAGTTCA	59.424	41.667	9.58	0.93	44.17	3.18
641	642	5.240403	GGCTCAGTCTTTCAAAAGAGTTCAT	59.760	40.000	9.58	0.00	44.17	2.57
642	643	6.428159	GGCTCAGTCTTTCAAAAGAGTTCATA	59.572	38.462	9.58	0.00	44.17	2.15
643	644	7.360776	GGCTCAGTCTTTCAAAAGAGTTCATAG	60.361	40.741	9.58	7.04	44.17	2.23
644	645	7.360776	GCTCAGTCTTTCAAAAGAGTTCATAGG	60.361	40.741	9.58	0.13	44.17	2.57
645	646	6.936900	TCAGTCTTTCAAAAGAGTTCATAGGG	59.063	38.462	9.58	0.00	44.17	3.53
646	647	6.936900	CAGTCTTTCAAAAGAGTTCATAGGGA	59.063	38.462	9.58	0.00	44.17	4.20
647	648	7.609532	CAGTCTTTCAAAAGAGTTCATAGGGAT	59.390	37.037	9.58	0.00	44.17	3.85
648	649	8.826765	AGTCTTTCAAAAGAGTTCATAGGGATA	58.173	33.333	5.45	0.00	44.17	2.59
649	650	9.449719	GTCTTTCAAAAGAGTTCATAGGGATAA	57.550	33.333	5.45	0.00	45.01	1.75
660	661	8.423906	AGTTCATAGGGATAAGATATTCGTGT	57.576	34.615	0.00	0.00	0.00	4.49
665	666	5.601662	AGGGATAAGATATTCGTGTGTGTG	58.398	41.667	0.00	0.00	0.00	3.82
674	675	7.492524	AGATATTCGTGTGTGTGTTCATAGAT	58.507	34.615	0.00	0.00	0.00	1.98
677	678	6.885735	TTCGTGTGTGTGTTCATAGATATG	57.114	37.500	0.00	0.00	35.04	1.78
679	680	6.033966	TCGTGTGTGTGTTCATAGATATGAC	58.966	40.000	2.00	0.20	42.00	3.06
687	688	9.894783	GTGTGTTCATAGATATGACTATACGTT	57.105	33.333	0.00	0.00	42.00	3.99
688	689	9.893305	TGTGTTCATAGATATGACTATACGTTG	57.107	33.333	0.00	0.00	42.00	4.10
689	690	9.894783	GTGTTCATAGATATGACTATACGTTGT	57.105	33.333	0.00	0.00	42.00	3.32
693	694	9.893305	TCATAGATATGACTATACGTTGTTGTG	57.107	33.333	0.00	0.00	37.76	3.33
704	705	4.921470	ACGTTGTTGTGTATGTATGAGC	57.079	40.909	0.00	0.00	0.00	4.26
717	718	1.797046	GTATGAGCATCCGCATCTGTG	59.203	52.381	0.00	0.00	42.27	3.66
886	887	4.202326	ACGATTGAACAGTCAACTTACCCT	60.202	41.667	0.00	0.00	46.40	4.34
907	908	4.340950	CCTTCAAAACCCTCAAGTTGCTTA	59.659	41.667	0.00	0.00	0.00	3.09
909	910	3.634910	TCAAAACCCTCAAGTTGCTTACC	59.365	43.478	0.00	0.00	0.00	2.85
910	911	2.287977	AACCCTCAAGTTGCTTACCC	57.712	50.000	0.00	0.00	0.00	3.69
918	919	3.315949	TTGCTTACCCCGCCGTCT	61.316	61.111	0.00	0.00	0.00	4.18
944	945	2.478894	CCCGTGGCTATATAAGTTTGCG	59.521	50.000	0.00	0.00	0.00	4.85
950	951	2.875933	GCTATATAAGTTTGCGCCCACA	59.124	45.455	4.18	0.00	0.00	4.17
956	957	2.124529	TTTGCGCCCACACACAGA	60.125	55.556	4.18	0.00	0.00	3.41
1016	1017	2.279517	CATGGCTACTCGTCCCGC	60.280	66.667	0.00	0.00	0.00	6.13
1107	1108	1.960040	TACTCCAGACATGCCAGCCG	61.960	60.000	0.00	0.00	0.00	5.52
1563	1564	4.595538	GTGCCGGTCACGTGGTCA	62.596	66.667	17.00	4.01	38.78	4.02
1567	1568	2.725641	CGGTCACGTGGTCAGACA	59.274	61.111	17.00	0.00	34.04	3.41
1589	1590	1.132643	GTGACCTAGGTACACGAGCTG	59.867	57.143	16.29	0.00	37.09	4.24
1603	1604	3.947841	GCTGCCAAACGCGACACA	61.948	61.111	15.93	2.22	42.08	3.72
1768	1770	4.318903	CGCTGTTCACGGTTATTACAAACA	60.319	41.667	0.00	0.00	0.00	2.83
1896	1898	5.333263	CCAACCAAGATTTCACAAATTTCGC	60.333	40.000	0.00	0.00	0.00	4.70
1922	1924	6.589830	ACATAATACTGATTCTGTTCGTGC	57.410	37.500	1.28	0.00	30.39	5.34
1936	1938	3.695606	GTGCCTGAGTCTCGCCCA	61.696	66.667	0.00	0.00	0.00	5.36
1938	1940	2.347490	GCCTGAGTCTCGCCCAAA	59.653	61.111	0.00	0.00	0.00	3.28
2025	2028	2.924640	ATGGCTCCCTCCATGCTG	59.075	61.111	0.00	0.00	44.72	4.41
2027	2030	0.695462	ATGGCTCCCTCCATGCTGTA	60.695	55.000	0.00	0.00	44.72	2.74
2028	2031	0.913934	TGGCTCCCTCCATGCTGTAA	60.914	55.000	0.00	0.00	0.00	2.41
2029	2032	0.255890	GGCTCCCTCCATGCTGTAAA	59.744	55.000	0.00	0.00	0.00	2.01
2030	2033	1.340991	GGCTCCCTCCATGCTGTAAAA	60.341	52.381	0.00	0.00	0.00	1.52
2037	2544	3.691609	CCTCCATGCTGTAAAAAGGTCTC	59.308	47.826	0.00	0.00	0.00	3.36
2096	2603	4.383774	TTTTCTTGAATACGCACGAGTG	57.616	40.909	0.00	0.00	0.00	3.51
2097	2604	2.717580	TCTTGAATACGCACGAGTGT	57.282	45.000	4.12	4.12	42.14	3.55
2111	2618	5.413969	CACGAGTGTGCATATCATTCATT	57.586	39.130	0.00	0.00	39.67	2.57
2112	2619	6.529463	CACGAGTGTGCATATCATTCATTA	57.471	37.500	0.00	0.00	39.67	1.90
2113	2620	6.947258	CACGAGTGTGCATATCATTCATTAA	58.053	36.000	0.00	0.00	39.67	1.40
2114	2621	7.408910	CACGAGTGTGCATATCATTCATTAAA	58.591	34.615	0.00	0.00	39.67	1.52
2115	2622	7.585210	CACGAGTGTGCATATCATTCATTAAAG	59.415	37.037	0.00	0.00	39.67	1.85
2116	2623	7.495606	ACGAGTGTGCATATCATTCATTAAAGA	59.504	33.333	0.00	0.00	0.00	2.52
2117	2624	8.337532	CGAGTGTGCATATCATTCATTAAAGAA	58.662	33.333	0.00	0.00	0.00	2.52
2136	2643	1.911057	AAAAAGGAGAAAGAGCCCCG	58.089	50.000	0.00	0.00	0.00	5.73
2137	2644	1.064825	AAAAGGAGAAAGAGCCCCGA	58.935	50.000	0.00	0.00	0.00	5.14
2138	2645	1.064825	AAAGGAGAAAGAGCCCCGAA	58.935	50.000	0.00	0.00	0.00	4.30
2139	2646	1.290134	AAGGAGAAAGAGCCCCGAAT	58.710	50.000	0.00	0.00	0.00	3.34
2140	2647	0.833949	AGGAGAAAGAGCCCCGAATC	59.166	55.000	0.00	0.00	0.00	2.52
2141	2648	0.179043	GGAGAAAGAGCCCCGAATCC	60.179	60.000	0.00	0.00	0.00	3.01
2142	2649	0.541863	GAGAAAGAGCCCCGAATCCA	59.458	55.000	0.00	0.00	0.00	3.41
2143	2650	0.253327	AGAAAGAGCCCCGAATCCAC	59.747	55.000	0.00	0.00	0.00	4.02
2144	2651	0.035439	GAAAGAGCCCCGAATCCACA	60.035	55.000	0.00	0.00	0.00	4.17
2145	2652	0.404040	AAAGAGCCCCGAATCCACAA	59.596	50.000	0.00	0.00	0.00	3.33
2146	2653	0.035056	AAGAGCCCCGAATCCACAAG	60.035	55.000	0.00	0.00	0.00	3.16
2147	2654	1.201429	AGAGCCCCGAATCCACAAGT	61.201	55.000	0.00	0.00	0.00	3.16
2148	2655	0.744771	GAGCCCCGAATCCACAAGTC	60.745	60.000	0.00	0.00	0.00	3.01
2149	2656	1.749258	GCCCCGAATCCACAAGTCC	60.749	63.158	0.00	0.00	0.00	3.85
2150	2657	1.682849	CCCCGAATCCACAAGTCCA	59.317	57.895	0.00	0.00	0.00	4.02
2151	2658	0.676782	CCCCGAATCCACAAGTCCAC	60.677	60.000	0.00	0.00	0.00	4.02
2152	2659	0.036164	CCCGAATCCACAAGTCCACA	59.964	55.000	0.00	0.00	0.00	4.17
2153	2660	1.442769	CCGAATCCACAAGTCCACAG	58.557	55.000	0.00	0.00	0.00	3.66
2154	2661	1.270839	CCGAATCCACAAGTCCACAGT	60.271	52.381	0.00	0.00	0.00	3.55
2155	2662	2.494059	CGAATCCACAAGTCCACAGTT	58.506	47.619	0.00	0.00	0.00	3.16
2156	2663	3.556213	CCGAATCCACAAGTCCACAGTTA	60.556	47.826	0.00	0.00	0.00	2.24
2157	2664	3.432252	CGAATCCACAAGTCCACAGTTAC	59.568	47.826	0.00	0.00	0.00	2.50
2158	2665	4.385825	GAATCCACAAGTCCACAGTTACA	58.614	43.478	0.00	0.00	0.00	2.41
2159	2666	4.640771	ATCCACAAGTCCACAGTTACAT	57.359	40.909	0.00	0.00	0.00	2.29
2160	2667	3.738982	TCCACAAGTCCACAGTTACATG	58.261	45.455	0.00	0.00	0.00	3.21
2161	2668	3.389656	TCCACAAGTCCACAGTTACATGA	59.610	43.478	0.00	0.00	0.00	3.07
2162	2669	4.041567	TCCACAAGTCCACAGTTACATGAT	59.958	41.667	0.00	0.00	0.00	2.45
2163	2670	4.761739	CCACAAGTCCACAGTTACATGATT	59.238	41.667	0.00	0.00	0.00	2.57
2164	2671	5.937540	CCACAAGTCCACAGTTACATGATTA	59.062	40.000	0.00	0.00	0.00	1.75
2165	2672	6.599244	CCACAAGTCCACAGTTACATGATTAT	59.401	38.462	0.00	0.00	0.00	1.28
2166	2673	7.121168	CCACAAGTCCACAGTTACATGATTATT	59.879	37.037	0.00	0.00	0.00	1.40
2167	2674	8.514594	CACAAGTCCACAGTTACATGATTATTT	58.485	33.333	0.00	0.00	0.00	1.40
2168	2675	9.733556	ACAAGTCCACAGTTACATGATTATTTA	57.266	29.630	0.00	0.00	0.00	1.40
2169	2676	9.988350	CAAGTCCACAGTTACATGATTATTTAC	57.012	33.333	0.00	0.00	0.00	2.01
2170	2677	9.733556	AAGTCCACAGTTACATGATTATTTACA	57.266	29.630	0.00	0.00	0.00	2.41
2171	2678	9.905713	AGTCCACAGTTACATGATTATTTACAT	57.094	29.630	0.00	0.00	0.00	2.29
2174	2681	9.650371	CCACAGTTACATGATTATTTACATTCG	57.350	33.333	0.00	0.00	0.00	3.34
2175	2682	9.650371	CACAGTTACATGATTATTTACATTCGG	57.350	33.333	0.00	0.00	0.00	4.30
2176	2683	9.607988	ACAGTTACATGATTATTTACATTCGGA	57.392	29.630	0.00	0.00	0.00	4.55
2177	2684	9.864034	CAGTTACATGATTATTTACATTCGGAC	57.136	33.333	0.00	0.00	0.00	4.79
2178	2685	9.832445	AGTTACATGATTATTTACATTCGGACT	57.168	29.630	0.00	0.00	0.00	3.85
2181	2688	7.851508	ACATGATTATTTACATTCGGACTTCG	58.148	34.615	0.00	0.00	40.90	3.79
2182	2689	6.281848	TGATTATTTACATTCGGACTTCGC	57.718	37.500	0.00	0.00	39.05	4.70
2183	2690	5.235616	TGATTATTTACATTCGGACTTCGCC	59.764	40.000	0.00	0.00	39.05	5.54
2184	2691	1.729284	TTTACATTCGGACTTCGCCC	58.271	50.000	0.00	0.00	39.05	6.13
2191	2698	3.379445	GGACTTCGCCCGAGACCA	61.379	66.667	0.00	0.00	0.00	4.02
2192	2699	2.126031	GACTTCGCCCGAGACCAC	60.126	66.667	0.00	0.00	0.00	4.16
2193	2700	3.644399	GACTTCGCCCGAGACCACC	62.644	68.421	0.00	0.00	0.00	4.61
2194	2701	4.452733	CTTCGCCCGAGACCACCC	62.453	72.222	0.00	0.00	0.00	4.61
2199	2706	3.253838	CCCGAGACCACCCCCAAA	61.254	66.667	0.00	0.00	0.00	3.28
2200	2707	2.033602	CCGAGACCACCCCCAAAC	59.966	66.667	0.00	0.00	0.00	2.93
2201	2708	2.526046	CCGAGACCACCCCCAAACT	61.526	63.158	0.00	0.00	0.00	2.66
2202	2709	1.454539	CGAGACCACCCCCAAACTT	59.545	57.895	0.00	0.00	0.00	2.66
2203	2710	0.688487	CGAGACCACCCCCAAACTTA	59.312	55.000	0.00	0.00	0.00	2.24
2204	2711	1.609841	CGAGACCACCCCCAAACTTAC	60.610	57.143	0.00	0.00	0.00	2.34
2205	2712	1.422402	GAGACCACCCCCAAACTTACA	59.578	52.381	0.00	0.00	0.00	2.41
2206	2713	1.854280	AGACCACCCCCAAACTTACAA	59.146	47.619	0.00	0.00	0.00	2.41
2207	2714	2.245287	AGACCACCCCCAAACTTACAAA	59.755	45.455	0.00	0.00	0.00	2.83
2208	2715	2.626266	GACCACCCCCAAACTTACAAAG	59.374	50.000	0.00	0.00	0.00	2.77
2209	2716	1.967779	CCACCCCCAAACTTACAAAGG	59.032	52.381	0.00	0.00	0.00	3.11
2210	2717	2.425102	CCACCCCCAAACTTACAAAGGA	60.425	50.000	0.00	0.00	0.00	3.36
2211	2718	2.626266	CACCCCCAAACTTACAAAGGAC	59.374	50.000	0.00	0.00	0.00	3.85
2212	2719	2.516702	ACCCCCAAACTTACAAAGGACT	59.483	45.455	0.00	0.00	0.00	3.85
2213	2720	3.723154	ACCCCCAAACTTACAAAGGACTA	59.277	43.478	0.00	0.00	0.00	2.59
2214	2721	4.077108	CCCCCAAACTTACAAAGGACTAC	58.923	47.826	0.00	0.00	0.00	2.73
2215	2722	4.202535	CCCCCAAACTTACAAAGGACTACT	60.203	45.833	0.00	0.00	0.00	2.57
2216	2723	5.001874	CCCCAAACTTACAAAGGACTACTC	58.998	45.833	0.00	0.00	0.00	2.59
2217	2724	4.689345	CCCAAACTTACAAAGGACTACTCG	59.311	45.833	0.00	0.00	0.00	4.18
2218	2725	4.689345	CCAAACTTACAAAGGACTACTCGG	59.311	45.833	0.00	0.00	0.00	4.63
2219	2726	5.295152	CAAACTTACAAAGGACTACTCGGT	58.705	41.667	0.00	0.00	0.00	4.69
2220	2727	4.516365	ACTTACAAAGGACTACTCGGTG	57.484	45.455	0.00	0.00	0.00	4.94
2221	2728	3.893813	ACTTACAAAGGACTACTCGGTGT	59.106	43.478	0.00	0.00	0.00	4.16
2222	2729	2.814280	ACAAAGGACTACTCGGTGTG	57.186	50.000	0.00	0.00	0.00	3.82
2223	2730	1.343465	ACAAAGGACTACTCGGTGTGG	59.657	52.381	0.00	0.00	0.00	4.17
2224	2731	0.974383	AAAGGACTACTCGGTGTGGG	59.026	55.000	0.00	0.00	0.00	4.61
2225	2732	0.178941	AAGGACTACTCGGTGTGGGT	60.179	55.000	0.00	0.00	0.00	4.51
2226	2733	0.178941	AGGACTACTCGGTGTGGGTT	60.179	55.000	0.00	0.00	0.00	4.11
2227	2734	0.683412	GGACTACTCGGTGTGGGTTT	59.317	55.000	0.00	0.00	0.00	3.27
2228	2735	1.895131	GGACTACTCGGTGTGGGTTTA	59.105	52.381	0.00	0.00	0.00	2.01
2229	2736	2.299867	GGACTACTCGGTGTGGGTTTAA	59.700	50.000	0.00	0.00	0.00	1.52
2230	2737	3.055602	GGACTACTCGGTGTGGGTTTAAT	60.056	47.826	0.00	0.00	0.00	1.40
2231	2738	3.930848	GACTACTCGGTGTGGGTTTAATG	59.069	47.826	0.00	0.00	0.00	1.90
2232	2739	3.579586	ACTACTCGGTGTGGGTTTAATGA	59.420	43.478	0.00	0.00	0.00	2.57
2233	2740	3.495434	ACTCGGTGTGGGTTTAATGAA	57.505	42.857	0.00	0.00	0.00	2.57
2238	2745	3.677596	CGGTGTGGGTTTAATGAATTTGC	59.322	43.478	0.00	0.00	0.00	3.68
2253	2760	6.751514	TGAATTTGCTCGCTAAATTCCTAA	57.248	33.333	22.06	11.38	46.42	2.69
2271	2778	4.864334	CTCCATCCGTGGCTGCCC	62.864	72.222	17.53	6.66	45.63	5.36
2288	2829	2.375174	TGCCCCAAATAGTGTGAGTTCT	59.625	45.455	0.00	0.00	0.00	3.01
2336	2877	8.693120	ATACTCTCTTCGTTCCATAATGTAGA	57.307	34.615	0.00	0.00	0.00	2.59
2337	2878	6.797454	ACTCTCTTCGTTCCATAATGTAGAC	58.203	40.000	0.00	0.00	0.00	2.59
2344	2885	7.137490	TCGTTCCATAATGTAGACCGTATAG	57.863	40.000	0.00	0.00	0.00	1.31
2346	2887	7.445096	TCGTTCCATAATGTAGACCGTATAGAA	59.555	37.037	0.00	0.00	0.00	2.10
2476	3017	8.932434	ATTTAAGGGTTTATGTTTGGCATTTT	57.068	26.923	0.00	0.00	38.94	1.82
2479	3020	9.847224	TTAAGGGTTTATGTTTGGCATTTTAAA	57.153	25.926	0.00	0.00	38.94	1.52
2522	3063	6.347644	GCAAACTTGGTCAAAATTTATGAGGC	60.348	38.462	0.00	0.00	0.00	4.70
2524	3065	6.670695	ACTTGGTCAAAATTTATGAGGCTT	57.329	33.333	0.00	0.00	0.00	4.35
2533	3074	7.872483	TCAAAATTTATGAGGCTTGACTTTTCC	59.128	33.333	0.00	0.00	0.00	3.13
2547	3088	9.860898	GCTTGACTTTTCCAAAAATCTATATGT	57.139	29.630	0.00	0.00	0.00	2.29

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
0	1	0.727122	GCTGAGCGCAACAACATCAC	60.727	55.000	11.47	0.00	38.92	3.06
1	2	1.575922	GCTGAGCGCAACAACATCA	59.424	52.632	11.47	0.85	38.92	3.07
2	3	4.447365	GCTGAGCGCAACAACATC	57.553	55.556	11.47	0.00	38.92	3.06
11	12	1.262683	GGATACAAAGATGCTGAGCGC	59.737	52.381	0.00	0.00	39.77	5.92
12	13	2.543012	CAGGATACAAAGATGCTGAGCG	59.457	50.000	0.00	0.00	45.41	5.03
13	14	3.539604	ACAGGATACAAAGATGCTGAGC	58.460	45.455	11.27	0.00	45.41	4.26
14	15	5.021033	AGACAGGATACAAAGATGCTGAG	57.979	43.478	11.27	0.00	45.41	3.35
15	16	5.181009	CAAGACAGGATACAAAGATGCTGA	58.819	41.667	11.27	0.00	45.41	4.26
16	17	7.134303	ATCCAAGACAGGATACAAAGATGCTG	61.134	42.308	3.68	3.68	46.41	4.41
17	18	4.225942	TCCAAGACAGGATACAAAGATGCT	59.774	41.667	0.00	0.00	41.41	3.79
18	19	4.517285	TCCAAGACAGGATACAAAGATGC	58.483	43.478	0.00	0.00	41.41	3.91
19	20	6.037940	CACATCCAAGACAGGATACAAAGATG	59.962	42.308	0.00	0.00	46.54	2.90
20	21	6.118170	CACATCCAAGACAGGATACAAAGAT	58.882	40.000	0.00	0.00	46.54	2.40
21	22	5.013079	ACACATCCAAGACAGGATACAAAGA	59.987	40.000	0.00	0.00	46.54	2.52
22	23	5.122869	CACACATCCAAGACAGGATACAAAG	59.877	44.000	0.00	0.00	46.54	2.77
23	24	5.003160	CACACATCCAAGACAGGATACAAA	58.997	41.667	0.00	0.00	46.54	2.83
24	25	4.041567	ACACACATCCAAGACAGGATACAA	59.958	41.667	0.00	0.00	46.54	2.41
25	26	3.582647	ACACACATCCAAGACAGGATACA	59.417	43.478	0.00	0.00	46.54	2.29
26	27	3.935203	CACACACATCCAAGACAGGATAC	59.065	47.826	0.00	0.00	46.54	2.24
27	28	3.582647	ACACACACATCCAAGACAGGATA	59.417	43.478	0.00	0.00	46.54	2.59
29	30	1.768275	ACACACACATCCAAGACAGGA	59.232	47.619	0.00	0.00	43.01	3.86
30	31	2.260844	ACACACACATCCAAGACAGG	57.739	50.000	0.00	0.00	0.00	4.00
31	32	2.945008	ACAACACACACATCCAAGACAG	59.055	45.455	0.00	0.00	0.00	3.51
32	33	2.682352	CACAACACACACATCCAAGACA	59.318	45.455	0.00	0.00	0.00	3.41
33	34	2.682856	ACACAACACACACATCCAAGAC	59.317	45.455	0.00	0.00	0.00	3.01
34	35	2.997980	ACACAACACACACATCCAAGA	58.002	42.857	0.00	0.00	0.00	3.02
35	36	3.437428	CAACACAACACACACATCCAAG	58.563	45.455	0.00	0.00	0.00	3.61
36	37	2.165234	CCAACACAACACACACATCCAA	59.835	45.455	0.00	0.00	0.00	3.53
37	38	1.747924	CCAACACAACACACACATCCA	59.252	47.619	0.00	0.00	0.00	3.41
38	39	1.535860	GCCAACACAACACACACATCC	60.536	52.381	0.00	0.00	0.00	3.51
39	40	1.133982	TGCCAACACAACACACACATC	59.866	47.619	0.00	0.00	0.00	3.06
40	41	1.180907	TGCCAACACAACACACACAT	58.819	45.000	0.00	0.00	0.00	3.21
41	42	1.135170	CATGCCAACACAACACACACA	60.135	47.619	0.00	0.00	0.00	3.72
42	43	1.558741	CATGCCAACACAACACACAC	58.441	50.000	0.00	0.00	0.00	3.82
43	44	0.179116	GCATGCCAACACAACACACA	60.179	50.000	6.36	0.00	0.00	3.72
44	45	1.208009	CGCATGCCAACACAACACAC	61.208	55.000	13.15	0.00	0.00	3.82
45	46	1.065436	CGCATGCCAACACAACACA	59.935	52.632	13.15	0.00	0.00	3.72
46	47	0.527385	AACGCATGCCAACACAACAC	60.527	50.000	13.15	0.00	0.00	3.32
47	48	0.174389	AAACGCATGCCAACACAACA	59.826	45.000	13.15	0.00	0.00	3.33
48	49	2.126914	TAAACGCATGCCAACACAAC	57.873	45.000	13.15	0.00	0.00	3.32
49	50	3.366476	GGTATAAACGCATGCCAACACAA	60.366	43.478	13.15	0.00	31.48	3.33
50	51	2.162608	GGTATAAACGCATGCCAACACA	59.837	45.455	13.15	0.00	31.48	3.72
51	52	2.789779	CGGTATAAACGCATGCCAACAC	60.790	50.000	13.15	2.79	30.60	3.32
52	53	1.398739	CGGTATAAACGCATGCCAACA	59.601	47.619	13.15	0.00	30.60	3.33
53	54	1.268335	CCGGTATAAACGCATGCCAAC	60.268	52.381	13.15	1.33	30.60	3.77
54	55	1.018148	CCGGTATAAACGCATGCCAA	58.982	50.000	13.15	0.00	30.60	4.52
55	56	0.816018	CCCGGTATAAACGCATGCCA	60.816	55.000	13.15	0.00	30.60	4.92
56	57	0.816421	ACCCGGTATAAACGCATGCC	60.816	55.000	13.15	0.00	0.00	4.40
57	58	1.018910	AACCCGGTATAAACGCATGC	58.981	50.000	7.91	7.91	0.00	4.06
58	59	6.542574	TTAATAACCCGGTATAAACGCATG	57.457	37.500	0.00	0.00	0.00	4.06
59	60	6.935771	TCATTAATAACCCGGTATAAACGCAT	59.064	34.615	0.00	0.00	0.00	4.73
60	61	6.286758	TCATTAATAACCCGGTATAAACGCA	58.713	36.000	0.00	0.00	0.00	5.24
61	62	6.783892	TCATTAATAACCCGGTATAAACGC	57.216	37.500	0.00	0.00	0.00	4.84
85	86	9.316730	CGCCCCGCTTTATATATAAAGTAAATA	57.683	33.333	31.63	8.29	46.78	1.40
86	87	8.042515	TCGCCCCGCTTTATATATAAAGTAAAT	58.957	33.333	31.63	0.00	46.78	1.40
87	88	7.385267	TCGCCCCGCTTTATATATAAAGTAAA	58.615	34.615	31.63	16.37	46.78	2.01
88	89	6.934056	TCGCCCCGCTTTATATATAAAGTAA	58.066	36.000	31.63	15.65	46.78	2.24
89	90	6.528537	TCGCCCCGCTTTATATATAAAGTA	57.471	37.500	31.63	15.18	46.78	2.24
90	91	5.410355	TCGCCCCGCTTTATATATAAAGT	57.590	39.130	31.63	0.00	46.78	2.66
92	93	6.232692	ACTTTCGCCCCGCTTTATATATAAA	58.767	36.000	15.47	15.47	0.00	1.40
93	94	5.797051	ACTTTCGCCCCGCTTTATATATAA	58.203	37.500	0.81	0.81	0.00	0.98
94	95	5.410355	ACTTTCGCCCCGCTTTATATATA	57.590	39.130	0.00	0.00	0.00	0.86
95	96	4.281898	ACTTTCGCCCCGCTTTATATAT	57.718	40.909	0.00	0.00	0.00	0.86
96	97	3.756933	ACTTTCGCCCCGCTTTATATA	57.243	42.857	0.00	0.00	0.00	0.86
97	98	2.632987	ACTTTCGCCCCGCTTTATAT	57.367	45.000	0.00	0.00	0.00	0.86
98	99	2.406596	AACTTTCGCCCCGCTTTATA	57.593	45.000	0.00	0.00	0.00	0.98
99	100	1.541379	AAACTTTCGCCCCGCTTTAT	58.459	45.000	0.00	0.00	0.00	1.40
100	101	1.320507	AAAACTTTCGCCCCGCTTTA	58.679	45.000	0.00	0.00	0.00	1.85
101	102	0.462375	AAAAACTTTCGCCCCGCTTT	59.538	45.000	0.00	0.00	0.00	3.51
102	103	2.120765	AAAAACTTTCGCCCCGCTT	58.879	47.368	0.00	0.00	0.00	4.68
103	104	3.850508	AAAAACTTTCGCCCCGCT	58.149	50.000	0.00	0.00	0.00	5.52
119	120	9.077885	GATGGGATATCTATGCTTTACCAAAAA	57.922	33.333	2.05	0.00	0.00	1.94
120	121	8.224025	TGATGGGATATCTATGCTTTACCAAAA	58.776	33.333	2.05	0.00	0.00	2.44
121	122	7.754624	TGATGGGATATCTATGCTTTACCAAA	58.245	34.615	2.05	0.00	0.00	3.28
122	123	7.328404	TGATGGGATATCTATGCTTTACCAA	57.672	36.000	2.05	0.00	0.00	3.67
123	124	6.950860	TGATGGGATATCTATGCTTTACCA	57.049	37.500	2.05	0.00	0.00	3.25
124	125	8.814038	AAATGATGGGATATCTATGCTTTACC	57.186	34.615	2.05	0.00	0.00	2.85
127	128	9.597681	AGAAAAATGATGGGATATCTATGCTTT	57.402	29.630	2.05	0.00	0.00	3.51
128	129	9.240734	GAGAAAAATGATGGGATATCTATGCTT	57.759	33.333	2.05	0.00	0.00	3.91
129	130	8.613034	AGAGAAAAATGATGGGATATCTATGCT	58.387	33.333	2.05	0.00	0.00	3.79
130	131	8.804912	AGAGAAAAATGATGGGATATCTATGC	57.195	34.615	2.05	0.00	0.00	3.14
134	135	9.163894	TGACTAGAGAAAAATGATGGGATATCT	57.836	33.333	2.05	0.00	0.00	1.98
135	136	9.956640	ATGACTAGAGAAAAATGATGGGATATC	57.043	33.333	0.00	0.00	0.00	1.63
150	151	9.404848	TCCTCGAAACTAATTATGACTAGAGAA	57.595	33.333	0.00	0.00	0.00	2.87
151	152	8.975663	TCCTCGAAACTAATTATGACTAGAGA	57.024	34.615	0.00	0.00	0.00	3.10
152	153	8.842280	ACTCCTCGAAACTAATTATGACTAGAG	58.158	37.037	0.00	0.00	0.00	2.43
153	154	8.749026	ACTCCTCGAAACTAATTATGACTAGA	57.251	34.615	0.00	0.00	0.00	2.43
156	157	9.751542	CATTACTCCTCGAAACTAATTATGACT	57.248	33.333	0.00	0.00	0.00	3.41
157	158	9.530633	ACATTACTCCTCGAAACTAATTATGAC	57.469	33.333	0.00	0.00	0.00	3.06
165	166	9.842775	TCTAGATAACATTACTCCTCGAAACTA	57.157	33.333	0.00	0.00	0.00	2.24
166	167	8.749026	TCTAGATAACATTACTCCTCGAAACT	57.251	34.615	0.00	0.00	0.00	2.66
167	168	9.968870	AATCTAGATAACATTACTCCTCGAAAC	57.031	33.333	5.46	0.00	0.00	2.78
168	169	9.967346	CAATCTAGATAACATTACTCCTCGAAA	57.033	33.333	5.46	0.00	0.00	3.46
169	170	8.082852	GCAATCTAGATAACATTACTCCTCGAA	58.917	37.037	5.46	0.00	0.00	3.71
170	171	7.573283	CGCAATCTAGATAACATTACTCCTCGA	60.573	40.741	5.46	0.00	0.00	4.04
171	172	6.524933	CGCAATCTAGATAACATTACTCCTCG	59.475	42.308	5.46	0.00	0.00	4.63
172	173	7.327275	CACGCAATCTAGATAACATTACTCCTC	59.673	40.741	5.46	0.00	0.00	3.71
173	174	7.014326	TCACGCAATCTAGATAACATTACTCCT	59.986	37.037	5.46	0.00	0.00	3.69
174	175	7.145985	TCACGCAATCTAGATAACATTACTCC	58.854	38.462	5.46	0.00	0.00	3.85
175	176	8.575565	TTCACGCAATCTAGATAACATTACTC	57.424	34.615	5.46	0.00	0.00	2.59
176	177	8.818057	GTTTCACGCAATCTAGATAACATTACT	58.182	33.333	5.46	0.00	0.00	2.24
177	178	8.600625	TGTTTCACGCAATCTAGATAACATTAC	58.399	33.333	5.46	0.00	0.00	1.89
178	179	8.600625	GTGTTTCACGCAATCTAGATAACATTA	58.399	33.333	14.78	0.00	0.00	1.90
179	180	7.334421	AGTGTTTCACGCAATCTAGATAACATT	59.666	33.333	14.78	9.96	39.64	2.71
180	181	6.818644	AGTGTTTCACGCAATCTAGATAACAT	59.181	34.615	14.78	5.44	39.64	2.71
181	182	6.090763	CAGTGTTTCACGCAATCTAGATAACA	59.909	38.462	5.46	8.14	39.64	2.41
182	183	6.470160	CAGTGTTTCACGCAATCTAGATAAC	58.530	40.000	5.46	5.57	39.64	1.89
183	184	5.063438	GCAGTGTTTCACGCAATCTAGATAA	59.937	40.000	5.46	0.00	39.64	1.75
184	185	4.566759	GCAGTGTTTCACGCAATCTAGATA	59.433	41.667	5.46	0.00	39.64	1.98
185	186	3.372206	GCAGTGTTTCACGCAATCTAGAT	59.628	43.478	0.00	0.00	39.64	1.98
186	187	2.736721	GCAGTGTTTCACGCAATCTAGA	59.263	45.455	0.00	0.00	39.64	2.43
187	188	2.738846	AGCAGTGTTTCACGCAATCTAG	59.261	45.455	14.68	0.00	39.64	2.43
188	189	2.480037	CAGCAGTGTTTCACGCAATCTA	59.520	45.455	14.68	0.00	39.64	1.98
189	190	1.265095	CAGCAGTGTTTCACGCAATCT	59.735	47.619	14.68	0.77	39.64	2.40
190	191	1.002468	ACAGCAGTGTTTCACGCAATC	60.002	47.619	14.68	0.00	39.64	2.67
191	192	1.024271	ACAGCAGTGTTTCACGCAAT	58.976	45.000	14.68	4.43	39.64	3.56
192	193	0.098552	CACAGCAGTGTTTCACGCAA	59.901	50.000	0.22	0.00	40.92	4.85
193	194	1.720894	CACAGCAGTGTTTCACGCA	59.279	52.632	0.22	0.00	40.92	5.24
194	195	4.595629	CACAGCAGTGTTTCACGC	57.404	55.556	0.22	7.98	40.92	5.34
218	219	0.751277	TTGTCCAGTGCACTTGGGTG	60.751	55.000	25.49	13.80	45.53	4.61
219	220	0.466189	CTTGTCCAGTGCACTTGGGT	60.466	55.000	25.49	2.94	0.00	4.51
220	221	1.799258	GCTTGTCCAGTGCACTTGGG	61.799	60.000	25.49	21.21	0.00	4.12
221	222	1.656441	GCTTGTCCAGTGCACTTGG	59.344	57.895	18.94	21.03	0.00	3.61
222	223	0.820891	AGGCTTGTCCAGTGCACTTG	60.821	55.000	18.94	14.93	37.29	3.16
223	224	0.106519	AAGGCTTGTCCAGTGCACTT	60.107	50.000	18.94	0.00	37.29	3.16
224	225	0.820891	CAAGGCTTGTCCAGTGCACT	60.821	55.000	15.25	15.25	37.29	4.40
225	226	1.656441	CAAGGCTTGTCCAGTGCAC	59.344	57.895	19.07	9.40	37.29	4.57
226	227	2.195567	GCAAGGCTTGTCCAGTGCA	61.196	57.895	26.71	0.00	43.65	4.57
227	228	1.900498	AGCAAGGCTTGTCCAGTGC	60.900	57.895	26.71	12.73	44.19	4.40
228	229	4.488790	AGCAAGGCTTGTCCAGTG	57.511	55.556	26.71	2.25	33.89	3.66
237	238	6.040391	TGAAAGTTACAAATACAAGCAAGGCT	59.960	34.615	0.00	0.00	42.56	4.58
238	239	6.212955	TGAAAGTTACAAATACAAGCAAGGC	58.787	36.000	0.00	0.00	0.00	4.35
239	240	8.081633	TGATGAAAGTTACAAATACAAGCAAGG	58.918	33.333	0.00	0.00	0.00	3.61
240	241	9.121517	CTGATGAAAGTTACAAATACAAGCAAG	57.878	33.333	0.00	0.00	0.00	4.01
241	242	8.081633	CCTGATGAAAGTTACAAATACAAGCAA	58.918	33.333	0.00	0.00	0.00	3.91
242	243	7.592938	CCTGATGAAAGTTACAAATACAAGCA	58.407	34.615	0.00	0.00	0.00	3.91
243	244	6.528072	GCCTGATGAAAGTTACAAATACAAGC	59.472	38.462	0.00	0.00	0.00	4.01
244	245	7.029563	GGCCTGATGAAAGTTACAAATACAAG	58.970	38.462	0.00	0.00	0.00	3.16
245	246	6.719370	AGGCCTGATGAAAGTTACAAATACAA	59.281	34.615	3.11	0.00	0.00	2.41
246	247	6.245408	AGGCCTGATGAAAGTTACAAATACA	58.755	36.000	3.11	0.00	0.00	2.29
247	248	6.759497	AGGCCTGATGAAAGTTACAAATAC	57.241	37.500	3.11	0.00	0.00	1.89
248	249	6.152661	CCAAGGCCTGATGAAAGTTACAAATA	59.847	38.462	5.69	0.00	0.00	1.40
249	250	5.047092	CCAAGGCCTGATGAAAGTTACAAAT	60.047	40.000	5.69	0.00	0.00	2.32
250	251	4.280677	CCAAGGCCTGATGAAAGTTACAAA	59.719	41.667	5.69	0.00	0.00	2.83
251	252	3.826157	CCAAGGCCTGATGAAAGTTACAA	59.174	43.478	5.69	0.00	0.00	2.41
252	253	3.420893	CCAAGGCCTGATGAAAGTTACA	58.579	45.455	5.69	0.00	0.00	2.41
253	254	2.164422	GCCAAGGCCTGATGAAAGTTAC	59.836	50.000	5.69	0.00	34.56	2.50
254	255	2.446435	GCCAAGGCCTGATGAAAGTTA	58.554	47.619	5.69	0.00	34.56	2.24
255	256	1.260544	GCCAAGGCCTGATGAAAGTT	58.739	50.000	5.69	0.00	34.56	2.66
256	257	2.967270	GCCAAGGCCTGATGAAAGT	58.033	52.632	5.69	0.00	34.56	2.66
267	268	6.349363	CCTTATATTTCGAAATAGGCCAAGGC	60.349	42.308	28.17	1.52	34.62	4.35
268	269	6.715264	ACCTTATATTTCGAAATAGGCCAAGG	59.285	38.462	31.97	31.97	36.63	3.61
269	270	7.360101	CGACCTTATATTTCGAAATAGGCCAAG	60.360	40.741	28.80	24.93	34.62	3.61
270	271	6.425721	CGACCTTATATTTCGAAATAGGCCAA	59.574	38.462	28.80	19.70	34.62	4.52
271	272	5.929992	CGACCTTATATTTCGAAATAGGCCA	59.070	40.000	28.80	13.40	34.62	5.36
272	273	5.350640	CCGACCTTATATTTCGAAATAGGCC	59.649	44.000	28.80	20.34	34.62	5.19
273	274	5.163884	GCCGACCTTATATTTCGAAATAGGC	60.164	44.000	28.80	27.32	34.62	3.93
274	275	5.929992	TGCCGACCTTATATTTCGAAATAGG	59.070	40.000	28.80	27.43	34.62	2.57
275	276	6.645415	ACTGCCGACCTTATATTTCGAAATAG	59.355	38.462	28.80	19.94	34.62	1.73
276	277	6.518493	ACTGCCGACCTTATATTTCGAAATA	58.482	36.000	27.82	27.82	34.62	1.40
277	278	5.365619	ACTGCCGACCTTATATTTCGAAAT	58.634	37.500	25.48	25.48	34.62	2.17
278	279	4.761975	ACTGCCGACCTTATATTTCGAAA	58.238	39.130	13.91	13.91	34.62	3.46
279	280	4.395959	ACTGCCGACCTTATATTTCGAA	57.604	40.909	0.00	0.00	34.62	3.71
280	281	4.395959	AACTGCCGACCTTATATTTCGA	57.604	40.909	0.00	0.00	34.62	3.71
281	282	4.150098	GCTAACTGCCGACCTTATATTTCG	59.850	45.833	0.00	0.00	35.15	3.46
282	283	5.593183	GCTAACTGCCGACCTTATATTTC	57.407	43.478	0.00	0.00	35.15	2.17
296	297	2.230660	ACAAAGAAGGTGGCTAACTGC	58.769	47.619	0.00	0.00	41.94	4.40
297	298	4.338118	TGAAACAAAGAAGGTGGCTAACTG	59.662	41.667	0.00	0.00	0.00	3.16
298	299	4.532834	TGAAACAAAGAAGGTGGCTAACT	58.467	39.130	0.00	0.00	0.00	2.24
299	300	4.911514	TGAAACAAAGAAGGTGGCTAAC	57.088	40.909	0.00	0.00	0.00	2.34
300	301	5.923733	TTTGAAACAAAGAAGGTGGCTAA	57.076	34.783	0.00	0.00	0.00	3.09
301	302	5.923733	TTTTGAAACAAAGAAGGTGGCTA	57.076	34.783	0.00	0.00	0.00	3.93
302	303	4.817318	TTTTGAAACAAAGAAGGTGGCT	57.183	36.364	0.00	0.00	0.00	4.75
303	304	7.546778	TTTATTTTGAAACAAAGAAGGTGGC	57.453	32.000	0.00	0.00	0.00	5.01
339	340	9.624697	GCAGAGACAATACAATTTGTTTGAATA	57.375	29.630	20.96	2.01	39.85	1.75
340	341	8.143193	TGCAGAGACAATACAATTTGTTTGAAT	58.857	29.630	20.96	13.33	39.85	2.57
341	342	7.487484	TGCAGAGACAATACAATTTGTTTGAA	58.513	30.769	20.96	2.89	39.85	2.69
342	343	7.036996	TGCAGAGACAATACAATTTGTTTGA	57.963	32.000	20.96	3.18	39.85	2.69
343	344	6.919662	ACTGCAGAGACAATACAATTTGTTTG	59.080	34.615	23.35	13.21	39.85	2.93
344	345	7.042797	ACTGCAGAGACAATACAATTTGTTT	57.957	32.000	23.35	0.00	39.85	2.83
345	346	6.639632	ACTGCAGAGACAATACAATTTGTT	57.360	33.333	23.35	0.00	39.85	2.83
346	347	6.639632	AACTGCAGAGACAATACAATTTGT	57.360	33.333	23.35	7.30	42.37	2.83
347	348	7.140705	TGAAACTGCAGAGACAATACAATTTG	58.859	34.615	23.35	0.00	0.00	2.32
348	349	7.275888	TGAAACTGCAGAGACAATACAATTT	57.724	32.000	23.35	5.43	0.00	1.82
349	350	6.882610	TGAAACTGCAGAGACAATACAATT	57.117	33.333	23.35	0.00	0.00	2.32
350	351	6.488006	ACTTGAAACTGCAGAGACAATACAAT	59.512	34.615	23.35	0.00	0.00	2.71
351	352	5.822519	ACTTGAAACTGCAGAGACAATACAA	59.177	36.000	23.35	12.63	0.00	2.41
352	353	5.368145	ACTTGAAACTGCAGAGACAATACA	58.632	37.500	23.35	5.93	0.00	2.29
353	354	5.466728	TGACTTGAAACTGCAGAGACAATAC	59.533	40.000	23.35	16.58	0.00	1.89
354	355	5.610398	TGACTTGAAACTGCAGAGACAATA	58.390	37.500	23.35	9.16	0.00	1.90
355	356	4.454678	TGACTTGAAACTGCAGAGACAAT	58.545	39.130	23.35	11.77	0.00	2.71
356	357	3.872696	TGACTTGAAACTGCAGAGACAA	58.127	40.909	23.35	19.44	0.00	3.18
357	358	3.541996	TGACTTGAAACTGCAGAGACA	57.458	42.857	23.35	10.50	0.00	3.41
358	359	4.390297	GGTATGACTTGAAACTGCAGAGAC	59.610	45.833	23.35	7.79	0.00	3.36
359	360	4.284490	AGGTATGACTTGAAACTGCAGAGA	59.716	41.667	23.35	0.00	0.00	3.10
360	361	4.573900	AGGTATGACTTGAAACTGCAGAG	58.426	43.478	23.35	9.45	0.00	3.35
361	362	4.623932	AGGTATGACTTGAAACTGCAGA	57.376	40.909	23.35	0.00	0.00	4.26
362	363	6.992063	AATAGGTATGACTTGAAACTGCAG	57.008	37.500	13.48	13.48	0.00	4.41
363	364	8.046708	ACATAATAGGTATGACTTGAAACTGCA	58.953	33.333	0.50	0.00	42.07	4.41
364	365	8.438676	ACATAATAGGTATGACTTGAAACTGC	57.561	34.615	0.50	0.00	42.07	4.40
390	391	9.865321	CTGTCCAATCACAGATTAATTCAATTT	57.135	29.630	0.00	0.00	45.92	1.82
391	392	9.028284	ACTGTCCAATCACAGATTAATTCAATT	57.972	29.630	7.59	0.00	45.92	2.32
392	393	8.585471	ACTGTCCAATCACAGATTAATTCAAT	57.415	30.769	7.59	0.00	45.92	2.57
393	394	8.408043	AACTGTCCAATCACAGATTAATTCAA	57.592	30.769	7.59	0.00	45.92	2.69
394	395	8.408043	AAACTGTCCAATCACAGATTAATTCA	57.592	30.769	7.59	0.00	45.92	2.57
395	396	9.696917	AAAAACTGTCCAATCACAGATTAATTC	57.303	29.630	7.59	0.00	45.92	2.17
401	402	9.480053	CAAAATAAAAACTGTCCAATCACAGAT	57.520	29.630	7.59	0.00	45.92	2.90
402	403	7.437862	GCAAAATAAAAACTGTCCAATCACAGA	59.562	33.333	7.59	0.00	45.92	3.41
404	405	6.199908	CGCAAAATAAAAACTGTCCAATCACA	59.800	34.615	0.00	0.00	0.00	3.58
405	406	6.346518	CCGCAAAATAAAAACTGTCCAATCAC	60.347	38.462	0.00	0.00	0.00	3.06
406	407	5.694006	CCGCAAAATAAAAACTGTCCAATCA	59.306	36.000	0.00	0.00	0.00	2.57
407	408	5.389411	GCCGCAAAATAAAAACTGTCCAATC	60.389	40.000	0.00	0.00	0.00	2.67
408	409	4.450757	GCCGCAAAATAAAAACTGTCCAAT	59.549	37.500	0.00	0.00	0.00	3.16
409	410	3.804873	GCCGCAAAATAAAAACTGTCCAA	59.195	39.130	0.00	0.00	0.00	3.53
410	411	3.181475	TGCCGCAAAATAAAAACTGTCCA	60.181	39.130	0.00	0.00	0.00	4.02
411	412	3.183574	GTGCCGCAAAATAAAAACTGTCC	59.816	43.478	0.00	0.00	0.00	4.02
412	413	4.048504	AGTGCCGCAAAATAAAAACTGTC	58.951	39.130	0.00	0.00	0.00	3.51
413	414	3.801594	CAGTGCCGCAAAATAAAAACTGT	59.198	39.130	0.00	0.00	31.38	3.55
414	415	3.801594	ACAGTGCCGCAAAATAAAAACTG	59.198	39.130	0.00	0.00	39.67	3.16
415	416	3.801594	CACAGTGCCGCAAAATAAAAACT	59.198	39.130	0.00	0.00	0.00	2.66
416	417	3.799420	TCACAGTGCCGCAAAATAAAAAC	59.201	39.130	0.00	0.00	0.00	2.43
417	418	4.046938	TCACAGTGCCGCAAAATAAAAA	57.953	36.364	0.00	0.00	0.00	1.94
418	419	3.717400	TCACAGTGCCGCAAAATAAAA	57.283	38.095	0.00	0.00	0.00	1.52
419	420	3.932545	ATCACAGTGCCGCAAAATAAA	57.067	38.095	0.00	0.00	0.00	1.40
420	421	3.573598	CAATCACAGTGCCGCAAAATAA	58.426	40.909	0.00	0.00	0.00	1.40
421	422	2.094803	CCAATCACAGTGCCGCAAAATA	60.095	45.455	0.00	0.00	0.00	1.40
422	423	1.337074	CCAATCACAGTGCCGCAAAAT	60.337	47.619	0.00	0.00	0.00	1.82
423	424	0.031857	CCAATCACAGTGCCGCAAAA	59.968	50.000	0.00	0.00	0.00	2.44
424	425	0.821301	TCCAATCACAGTGCCGCAAA	60.821	50.000	0.00	0.00	0.00	3.68
425	426	0.608856	ATCCAATCACAGTGCCGCAA	60.609	50.000	0.00	0.00	0.00	4.85
426	427	0.251634	TATCCAATCACAGTGCCGCA	59.748	50.000	0.00	0.00	0.00	5.69
427	428	0.940126	CTATCCAATCACAGTGCCGC	59.060	55.000	0.00	0.00	0.00	6.53
428	429	2.315925	ACTATCCAATCACAGTGCCG	57.684	50.000	0.00	0.00	0.00	5.69
429	430	4.130118	CCTAACTATCCAATCACAGTGCC	58.870	47.826	0.00	0.00	0.00	5.01
430	431	5.023533	TCCTAACTATCCAATCACAGTGC	57.976	43.478	0.00	0.00	0.00	4.40
431	432	5.363868	TCCTCCTAACTATCCAATCACAGTG	59.636	44.000	0.00	0.00	0.00	3.66
432	433	5.364157	GTCCTCCTAACTATCCAATCACAGT	59.636	44.000	0.00	0.00	0.00	3.55
433	434	5.363868	TGTCCTCCTAACTATCCAATCACAG	59.636	44.000	0.00	0.00	0.00	3.66
434	435	5.277250	TGTCCTCCTAACTATCCAATCACA	58.723	41.667	0.00	0.00	0.00	3.58
435	436	5.364157	ACTGTCCTCCTAACTATCCAATCAC	59.636	44.000	0.00	0.00	0.00	3.06
436	437	5.363868	CACTGTCCTCCTAACTATCCAATCA	59.636	44.000	0.00	0.00	0.00	2.57
437	438	5.740513	GCACTGTCCTCCTAACTATCCAATC	60.741	48.000	0.00	0.00	0.00	2.67
438	439	4.101741	GCACTGTCCTCCTAACTATCCAAT	59.898	45.833	0.00	0.00	0.00	3.16
439	440	3.451178	GCACTGTCCTCCTAACTATCCAA	59.549	47.826	0.00	0.00	0.00	3.53
440	441	3.031736	GCACTGTCCTCCTAACTATCCA	58.968	50.000	0.00	0.00	0.00	3.41
441	442	3.301274	AGCACTGTCCTCCTAACTATCC	58.699	50.000	0.00	0.00	0.00	2.59
442	443	4.202172	GGAAGCACTGTCCTCCTAACTATC	60.202	50.000	0.00	0.00	31.94	2.08
443	444	3.707102	GGAAGCACTGTCCTCCTAACTAT	59.293	47.826	0.00	0.00	31.94	2.12
444	445	3.097614	GGAAGCACTGTCCTCCTAACTA	58.902	50.000	0.00	0.00	31.94	2.24
445	446	1.903183	GGAAGCACTGTCCTCCTAACT	59.097	52.381	0.00	0.00	31.94	2.24
446	447	1.623811	TGGAAGCACTGTCCTCCTAAC	59.376	52.381	0.00	0.00	36.03	2.34
447	448	1.902508	CTGGAAGCACTGTCCTCCTAA	59.097	52.381	0.00	0.00	36.03	2.69
448	449	1.561643	CTGGAAGCACTGTCCTCCTA	58.438	55.000	0.00	0.00	36.03	2.94
449	450	2.370718	CTGGAAGCACTGTCCTCCT	58.629	57.895	0.00	0.00	36.03	3.69
484	485	9.683069	GAAAAATCAGCAATCTCAAGTCTAAAA	57.317	29.630	0.00	0.00	0.00	1.52
485	486	9.071276	AGAAAAATCAGCAATCTCAAGTCTAAA	57.929	29.630	0.00	0.00	0.00	1.85
486	487	8.509690	CAGAAAAATCAGCAATCTCAAGTCTAA	58.490	33.333	0.00	0.00	0.00	2.10
487	488	7.879677	TCAGAAAAATCAGCAATCTCAAGTCTA	59.120	33.333	0.00	0.00	0.00	2.59
488	489	6.713903	TCAGAAAAATCAGCAATCTCAAGTCT	59.286	34.615	0.00	0.00	0.00	3.24
489	490	6.906659	TCAGAAAAATCAGCAATCTCAAGTC	58.093	36.000	0.00	0.00	0.00	3.01
490	491	6.889301	TCAGAAAAATCAGCAATCTCAAGT	57.111	33.333	0.00	0.00	0.00	3.16
491	492	8.758633	AATTCAGAAAAATCAGCAATCTCAAG	57.241	30.769	0.00	0.00	0.00	3.02
515	516	9.195411	GCACATCATCAAAAAGTCTGAAATAAA	57.805	29.630	0.00	0.00	0.00	1.40
516	517	7.538334	CGCACATCATCAAAAAGTCTGAAATAA	59.462	33.333	0.00	0.00	0.00	1.40
517	518	7.022979	CGCACATCATCAAAAAGTCTGAAATA	58.977	34.615	0.00	0.00	0.00	1.40
518	519	5.860182	CGCACATCATCAAAAAGTCTGAAAT	59.140	36.000	0.00	0.00	0.00	2.17
519	520	5.214417	CGCACATCATCAAAAAGTCTGAAA	58.786	37.500	0.00	0.00	0.00	2.69
520	521	4.786507	CGCACATCATCAAAAAGTCTGAA	58.213	39.130	0.00	0.00	0.00	3.02
521	522	3.365264	GCGCACATCATCAAAAAGTCTGA	60.365	43.478	0.30	0.00	0.00	3.27
522	523	2.912967	GCGCACATCATCAAAAAGTCTG	59.087	45.455	0.30	0.00	0.00	3.51
523	524	2.816087	AGCGCACATCATCAAAAAGTCT	59.184	40.909	11.47	0.00	0.00	3.24
524	525	3.166657	GAGCGCACATCATCAAAAAGTC	58.833	45.455	11.47	0.00	0.00	3.01
525	526	2.553602	TGAGCGCACATCATCAAAAAGT	59.446	40.909	11.47	0.00	0.00	2.66
526	527	3.168963	CTGAGCGCACATCATCAAAAAG	58.831	45.455	11.47	0.00	0.00	2.27
527	528	2.553602	ACTGAGCGCACATCATCAAAAA	59.446	40.909	11.47	0.00	0.00	1.94
528	529	2.095617	CACTGAGCGCACATCATCAAAA	60.096	45.455	11.47	0.00	0.00	2.44
529	530	1.465777	CACTGAGCGCACATCATCAAA	59.534	47.619	11.47	0.00	0.00	2.69
530	531	1.081094	CACTGAGCGCACATCATCAA	58.919	50.000	11.47	0.00	0.00	2.57
531	532	0.741927	CCACTGAGCGCACATCATCA	60.742	55.000	11.47	1.72	0.00	3.07
532	533	1.434622	CCCACTGAGCGCACATCATC	61.435	60.000	11.47	0.00	0.00	2.92
533	534	1.450848	CCCACTGAGCGCACATCAT	60.451	57.895	11.47	0.00	0.00	2.45
534	535	2.046988	CCCACTGAGCGCACATCA	60.047	61.111	11.47	3.47	0.00	3.07
535	536	1.812922	CTCCCACTGAGCGCACATC	60.813	63.158	11.47	0.00	33.47	3.06
536	537	2.267006	CTCCCACTGAGCGCACAT	59.733	61.111	11.47	0.00	33.47	3.21
537	538	4.007644	CCTCCCACTGAGCGCACA	62.008	66.667	11.47	9.28	39.98	4.57
538	539	3.655810	CTCCTCCCACTGAGCGCAC	62.656	68.421	11.47	3.13	39.98	5.34
539	540	3.385384	CTCCTCCCACTGAGCGCA	61.385	66.667	11.47	0.00	39.98	6.09
540	541	2.430610	ATCTCCTCCCACTGAGCGC	61.431	63.158	0.00	0.00	39.98	5.92
541	542	1.326213	ACATCTCCTCCCACTGAGCG	61.326	60.000	0.00	0.00	39.98	5.03
542	543	0.908198	AACATCTCCTCCCACTGAGC	59.092	55.000	0.00	0.00	39.98	4.26
543	544	1.484240	GGAACATCTCCTCCCACTGAG	59.516	57.143	0.00	0.00	41.61	3.35
544	545	1.573108	GGAACATCTCCTCCCACTGA	58.427	55.000	0.00	0.00	41.61	3.41
549	550	1.823976	GACGGGAACATCTCCTCCC	59.176	63.158	0.00	0.00	46.97	4.30
550	551	1.035932	TCGACGGGAACATCTCCTCC	61.036	60.000	0.00	0.00	44.68	4.30
551	552	0.100861	GTCGACGGGAACATCTCCTC	59.899	60.000	0.00	0.00	44.68	3.71
552	553	0.323542	AGTCGACGGGAACATCTCCT	60.324	55.000	10.46	0.00	44.68	3.69
553	554	1.386533	TAGTCGACGGGAACATCTCC	58.613	55.000	10.46	0.00	44.54	3.71
554	555	2.617308	TGATAGTCGACGGGAACATCTC	59.383	50.000	10.46	0.00	0.00	2.75
555	556	2.651455	TGATAGTCGACGGGAACATCT	58.349	47.619	10.46	0.00	0.00	2.90
556	557	3.066342	TCTTGATAGTCGACGGGAACATC	59.934	47.826	10.46	7.89	0.00	3.06
557	558	3.021695	TCTTGATAGTCGACGGGAACAT	58.978	45.455	10.46	0.00	0.00	2.71
558	559	2.163010	GTCTTGATAGTCGACGGGAACA	59.837	50.000	10.46	5.01	0.00	3.18
559	560	2.790468	CGTCTTGATAGTCGACGGGAAC	60.790	54.545	10.46	3.00	44.75	3.62
560	561	1.399440	CGTCTTGATAGTCGACGGGAA	59.601	52.381	10.46	1.26	44.75	3.97
561	562	1.012086	CGTCTTGATAGTCGACGGGA	58.988	55.000	10.46	0.00	44.75	5.14
562	563	3.528594	CGTCTTGATAGTCGACGGG	57.471	57.895	10.46	0.00	44.75	5.28
565	566	3.418094	CACAGACGTCTTGATAGTCGAC	58.582	50.000	17.26	7.70	39.65	4.20
566	567	2.418976	CCACAGACGTCTTGATAGTCGA	59.581	50.000	17.26	0.00	39.65	4.20
567	568	2.786854	CCACAGACGTCTTGATAGTCG	58.213	52.381	17.26	4.41	39.65	4.18
568	569	2.531206	GCCACAGACGTCTTGATAGTC	58.469	52.381	17.26	0.00	35.30	2.59
569	570	1.135373	CGCCACAGACGTCTTGATAGT	60.135	52.381	17.26	7.57	0.00	2.12
570	571	1.132453	TCGCCACAGACGTCTTGATAG	59.868	52.381	17.26	6.83	0.00	2.08
571	572	1.135489	GTCGCCACAGACGTCTTGATA	60.135	52.381	17.26	4.41	0.00	2.15
572	573	0.388649	GTCGCCACAGACGTCTTGAT	60.389	55.000	17.26	1.05	0.00	2.57
573	574	1.007734	GTCGCCACAGACGTCTTGA	60.008	57.895	17.26	6.24	0.00	3.02
574	575	0.597637	AAGTCGCCACAGACGTCTTG	60.598	55.000	17.26	16.58	45.26	3.02
575	576	0.318784	GAAGTCGCCACAGACGTCTT	60.319	55.000	17.26	4.83	45.26	3.01
576	577	1.286260	GAAGTCGCCACAGACGTCT	59.714	57.895	13.58	13.58	45.26	4.18
577	578	0.388649	ATGAAGTCGCCACAGACGTC	60.389	55.000	7.70	7.70	45.46	4.34
578	579	0.667487	CATGAAGTCGCCACAGACGT	60.667	55.000	0.00	0.00	45.26	4.34
579	580	0.388520	TCATGAAGTCGCCACAGACG	60.389	55.000	0.00	0.00	45.26	4.18
580	581	1.795768	TTCATGAAGTCGCCACAGAC	58.204	50.000	3.38	0.00	41.23	3.51
581	582	2.234661	AGATTCATGAAGTCGCCACAGA	59.765	45.455	14.54	0.00	0.00	3.41
582	583	2.625737	AGATTCATGAAGTCGCCACAG	58.374	47.619	14.54	0.00	0.00	3.66
583	584	2.768253	AGATTCATGAAGTCGCCACA	57.232	45.000	14.54	0.00	0.00	4.17
584	585	4.870426	TCTTAAGATTCATGAAGTCGCCAC	59.130	41.667	14.54	0.05	0.00	5.01
585	586	5.084818	TCTTAAGATTCATGAAGTCGCCA	57.915	39.130	14.54	0.00	0.00	5.69
586	587	5.755375	TCATCTTAAGATTCATGAAGTCGCC	59.245	40.000	15.49	1.02	31.21	5.54
587	588	6.834959	TCATCTTAAGATTCATGAAGTCGC	57.165	37.500	15.49	3.58	31.21	5.19
588	589	8.362860	ACATCATCTTAAGATTCATGAAGTCG	57.637	34.615	26.97	11.38	31.21	4.18
590	591	9.553064	GGTACATCATCTTAAGATTCATGAAGT	57.447	33.333	26.97	21.38	33.17	3.01
591	592	8.706936	CGGTACATCATCTTAAGATTCATGAAG	58.293	37.037	26.97	18.12	31.21	3.02
592	593	7.657354	CCGGTACATCATCTTAAGATTCATGAA	59.343	37.037	26.97	11.26	31.21	2.57
593	594	7.154656	CCGGTACATCATCTTAAGATTCATGA	58.845	38.462	26.97	19.28	31.21	3.07
594	595	6.128445	GCCGGTACATCATCTTAAGATTCATG	60.128	42.308	22.24	22.24	31.21	3.07
595	596	5.934625	GCCGGTACATCATCTTAAGATTCAT	59.065	40.000	15.49	7.89	31.21	2.57
596	597	5.070446	AGCCGGTACATCATCTTAAGATTCA	59.930	40.000	15.49	5.83	31.21	2.57
597	598	5.542779	AGCCGGTACATCATCTTAAGATTC	58.457	41.667	15.49	2.93	31.21	2.52
598	599	5.070446	TGAGCCGGTACATCATCTTAAGATT	59.930	40.000	15.49	4.03	31.21	2.40
599	600	4.588951	TGAGCCGGTACATCATCTTAAGAT	59.411	41.667	12.37	12.37	34.56	2.40
600	601	3.958147	TGAGCCGGTACATCATCTTAAGA	59.042	43.478	7.82	7.82	0.00	2.10
601	602	4.202161	ACTGAGCCGGTACATCATCTTAAG	60.202	45.833	1.90	0.00	0.00	1.85
602	603	3.704566	ACTGAGCCGGTACATCATCTTAA	59.295	43.478	1.90	0.00	0.00	1.85
603	604	3.296854	ACTGAGCCGGTACATCATCTTA	58.703	45.455	1.90	0.00	0.00	2.10
604	605	2.101582	GACTGAGCCGGTACATCATCTT	59.898	50.000	1.90	0.00	0.00	2.40
605	606	1.683917	GACTGAGCCGGTACATCATCT	59.316	52.381	1.90	0.00	0.00	2.90
606	607	1.683917	AGACTGAGCCGGTACATCATC	59.316	52.381	1.90	2.69	0.00	2.92
607	608	1.781786	AGACTGAGCCGGTACATCAT	58.218	50.000	1.90	0.00	0.00	2.45
608	609	1.557099	AAGACTGAGCCGGTACATCA	58.443	50.000	1.90	1.83	0.00	3.07
609	610	2.094182	TGAAAGACTGAGCCGGTACATC	60.094	50.000	1.90	0.00	0.00	3.06
610	611	1.899814	TGAAAGACTGAGCCGGTACAT	59.100	47.619	1.90	0.00	0.00	2.29
611	612	1.334160	TGAAAGACTGAGCCGGTACA	58.666	50.000	1.90	2.63	0.00	2.90
612	613	2.450609	TTGAAAGACTGAGCCGGTAC	57.549	50.000	1.90	0.00	0.00	3.34
613	614	3.070446	TCTTTTGAAAGACTGAGCCGGTA	59.930	43.478	1.90	0.00	39.95	4.02
614	615	2.158813	TCTTTTGAAAGACTGAGCCGGT	60.159	45.455	1.90	0.00	39.95	5.28
615	616	2.481952	CTCTTTTGAAAGACTGAGCCGG	59.518	50.000	0.00	0.00	39.95	6.13
616	617	3.134458	ACTCTTTTGAAAGACTGAGCCG	58.866	45.455	2.16	0.00	39.95	5.52
617	618	4.576463	TGAACTCTTTTGAAAGACTGAGCC	59.424	41.667	2.16	0.00	39.95	4.70
618	619	5.741388	TGAACTCTTTTGAAAGACTGAGC	57.259	39.130	2.16	0.00	39.95	4.26
619	620	7.118971	CCCTATGAACTCTTTTGAAAGACTGAG	59.881	40.741	2.16	0.00	39.95	3.35
620	621	6.936900	CCCTATGAACTCTTTTGAAAGACTGA	59.063	38.462	2.16	0.00	39.95	3.41
621	622	6.936900	TCCCTATGAACTCTTTTGAAAGACTG	59.063	38.462	2.16	0.00	39.95	3.51
622	623	7.079451	TCCCTATGAACTCTTTTGAAAGACT	57.921	36.000	2.16	0.00	39.95	3.24
623	624	7.929941	ATCCCTATGAACTCTTTTGAAAGAC	57.070	36.000	2.16	0.00	39.95	3.01
624	625	9.672673	CTTATCCCTATGAACTCTTTTGAAAGA	57.327	33.333	6.07	6.07	42.41	2.52
625	626	9.672673	TCTTATCCCTATGAACTCTTTTGAAAG	57.327	33.333	0.00	0.00	37.36	2.62
632	633	9.315363	ACGAATATCTTATCCCTATGAACTCTT	57.685	33.333	0.00	0.00	0.00	2.85
633	634	8.744652	CACGAATATCTTATCCCTATGAACTCT	58.255	37.037	0.00	0.00	0.00	3.24
634	635	8.524487	ACACGAATATCTTATCCCTATGAACTC	58.476	37.037	0.00	0.00	0.00	3.01
635	636	8.307483	CACACGAATATCTTATCCCTATGAACT	58.693	37.037	0.00	0.00	0.00	3.01
636	637	8.088981	ACACACGAATATCTTATCCCTATGAAC	58.911	37.037	0.00	0.00	0.00	3.18
637	638	8.088365	CACACACGAATATCTTATCCCTATGAA	58.912	37.037	0.00	0.00	0.00	2.57
638	639	7.232737	ACACACACGAATATCTTATCCCTATGA	59.767	37.037	0.00	0.00	0.00	2.15
639	640	7.329471	CACACACACGAATATCTTATCCCTATG	59.671	40.741	0.00	0.00	0.00	2.23
640	641	7.015292	ACACACACACGAATATCTTATCCCTAT	59.985	37.037	0.00	0.00	0.00	2.57
641	642	6.322969	ACACACACACGAATATCTTATCCCTA	59.677	38.462	0.00	0.00	0.00	3.53
642	643	5.128827	ACACACACACGAATATCTTATCCCT	59.871	40.000	0.00	0.00	0.00	4.20
643	644	5.357257	ACACACACACGAATATCTTATCCC	58.643	41.667	0.00	0.00	0.00	3.85
644	645	6.533723	TGAACACACACACGAATATCTTATCC	59.466	38.462	0.00	0.00	0.00	2.59
645	646	7.520119	TGAACACACACACGAATATCTTATC	57.480	36.000	0.00	0.00	0.00	1.75
646	647	9.249457	CTATGAACACACACACGAATATCTTAT	57.751	33.333	0.00	0.00	0.00	1.73
647	648	8.463607	TCTATGAACACACACACGAATATCTTA	58.536	33.333	0.00	0.00	0.00	2.10
648	649	7.320399	TCTATGAACACACACACGAATATCTT	58.680	34.615	0.00	0.00	0.00	2.40
649	650	6.863275	TCTATGAACACACACACGAATATCT	58.137	36.000	0.00	0.00	0.00	1.98
655	656	6.033966	GTCATATCTATGAACACACACACGA	58.966	40.000	1.56	0.00	43.65	4.35
660	661	9.063615	ACGTATAGTCATATCTATGAACACACA	57.936	33.333	1.56	0.00	43.65	3.72
677	678	8.845942	TCATACATACACAACAACGTATAGTC	57.154	34.615	0.00	0.00	0.00	2.59
679	680	7.434013	TGCTCATACATACACAACAACGTATAG	59.566	37.037	0.00	0.00	0.00	1.31
687	688	4.119136	CGGATGCTCATACATACACAACA	58.881	43.478	0.00	0.00	29.44	3.33
688	689	3.059597	GCGGATGCTCATACATACACAAC	60.060	47.826	0.00	0.00	38.39	3.32
689	690	3.130633	GCGGATGCTCATACATACACAA	58.869	45.455	0.00	0.00	38.39	3.33
690	691	2.102252	TGCGGATGCTCATACATACACA	59.898	45.455	0.00	0.00	43.34	3.72
691	692	2.754472	TGCGGATGCTCATACATACAC	58.246	47.619	0.00	0.00	43.34	2.90
692	693	3.259123	AGATGCGGATGCTCATACATACA	59.741	43.478	0.00	0.00	43.34	2.29
693	694	3.615937	CAGATGCGGATGCTCATACATAC	59.384	47.826	0.00	0.00	43.34	2.39
886	887	4.098807	GGTAAGCAACTTGAGGGTTTTGAA	59.901	41.667	0.00	0.00	0.00	2.69
927	928	2.158740	TGGGCGCAAACTTATATAGCCA	60.159	45.455	10.83	0.00	44.40	4.75
944	945	2.555547	GGCTGTTCTGTGTGTGGGC	61.556	63.158	0.00	0.00	0.00	5.36
950	951	1.889105	CTGTGCGGCTGTTCTGTGT	60.889	57.895	0.00	0.00	0.00	3.72
1016	1017	4.253257	GGAGGAGCGCGTAGGACG	62.253	72.222	8.43	0.00	45.88	4.79
1178	1179	2.087009	GCGAACGTTCTGTAGCGCT	61.087	57.895	24.80	17.26	45.47	5.92
1206	1207	4.353437	GTCCTTCCCGTGACGCGT	62.353	66.667	13.85	13.85	39.32	6.01
1563	1564	2.157738	GTGTACCTAGGTCACGTGTCT	58.842	52.381	20.32	16.05	0.00	3.41
1716	1718	7.394016	ACATTACATATATTGATCGGCAAGGA	58.606	34.615	0.00	0.00	40.42	3.36
1768	1770	3.191371	GGCCGAAAACTGAATGAACTGAT	59.809	43.478	0.00	0.00	0.00	2.90
1922	1924	0.539051	AGATTTGGGCGAGACTCAGG	59.461	55.000	2.82	0.00	0.00	3.86
1936	1938	5.760131	AGCATAAAAGTGGCTCCTAGATTT	58.240	37.500	0.00	0.00	30.74	2.17
1938	1940	4.967036	GAGCATAAAAGTGGCTCCTAGAT	58.033	43.478	0.00	0.00	46.35	1.98
1962	1964	2.811431	CCGTCTCTGGATGTAGCTAGAG	59.189	54.545	4.39	4.39	42.77	2.43
2022	2025	5.334957	GGCTAGTTTGAGACCTTTTTACAGC	60.335	44.000	0.00	0.00	0.00	4.40
2025	2028	4.458295	GGGGCTAGTTTGAGACCTTTTTAC	59.542	45.833	0.00	0.00	45.09	2.01
2027	2030	3.117284	TGGGGCTAGTTTGAGACCTTTTT	60.117	43.478	0.00	0.00	45.09	1.94
2028	2031	2.445525	TGGGGCTAGTTTGAGACCTTTT	59.554	45.455	0.00	0.00	45.09	2.27
2029	2032	2.062636	TGGGGCTAGTTTGAGACCTTT	58.937	47.619	0.00	0.00	45.09	3.11
2030	2033	1.742308	TGGGGCTAGTTTGAGACCTT	58.258	50.000	0.00	0.00	45.09	3.50
2037	2544	5.299279	CCACATACTATTTGGGGCTAGTTTG	59.701	44.000	0.00	0.00	34.82	2.93
2074	2581	4.271533	ACACTCGTGCGTATTCAAGAAAAA	59.728	37.500	0.00	0.00	0.00	1.94
2075	2582	3.805422	ACACTCGTGCGTATTCAAGAAAA	59.195	39.130	0.00	0.00	0.00	2.29
2076	2583	3.183574	CACACTCGTGCGTATTCAAGAAA	59.816	43.478	0.00	0.00	36.06	2.52
2077	2584	2.729360	CACACTCGTGCGTATTCAAGAA	59.271	45.455	0.00	0.00	36.06	2.52
2078	2585	2.324860	CACACTCGTGCGTATTCAAGA	58.675	47.619	0.00	0.00	36.06	3.02
2079	2586	2.769387	CACACTCGTGCGTATTCAAG	57.231	50.000	0.00	0.00	36.06	3.02
2089	2596	5.413969	AATGAATGATATGCACACTCGTG	57.586	39.130	0.00	0.00	46.56	4.35
2090	2597	7.495606	TCTTTAATGAATGATATGCACACTCGT	59.504	33.333	0.00	0.00	0.00	4.18
2091	2598	7.854534	TCTTTAATGAATGATATGCACACTCG	58.145	34.615	0.00	0.00	0.00	4.18
2117	2624	1.423921	TCGGGGCTCTTTCTCCTTTTT	59.576	47.619	0.00	0.00	0.00	1.94
2118	2625	1.064825	TCGGGGCTCTTTCTCCTTTT	58.935	50.000	0.00	0.00	0.00	2.27
2119	2626	1.064825	TTCGGGGCTCTTTCTCCTTT	58.935	50.000	0.00	0.00	0.00	3.11
2120	2627	1.210722	GATTCGGGGCTCTTTCTCCTT	59.789	52.381	0.00	0.00	0.00	3.36
2121	2628	0.833949	GATTCGGGGCTCTTTCTCCT	59.166	55.000	0.00	0.00	0.00	3.69
2122	2629	0.179043	GGATTCGGGGCTCTTTCTCC	60.179	60.000	0.00	0.00	0.00	3.71
2123	2630	0.541863	TGGATTCGGGGCTCTTTCTC	59.458	55.000	0.00	0.00	0.00	2.87
2124	2631	0.253327	GTGGATTCGGGGCTCTTTCT	59.747	55.000	0.00	0.00	0.00	2.52
2125	2632	0.035439	TGTGGATTCGGGGCTCTTTC	60.035	55.000	0.00	0.00	0.00	2.62
2126	2633	0.404040	TTGTGGATTCGGGGCTCTTT	59.596	50.000	0.00	0.00	0.00	2.52
2127	2634	0.035056	CTTGTGGATTCGGGGCTCTT	60.035	55.000	0.00	0.00	0.00	2.85
2128	2635	1.201429	ACTTGTGGATTCGGGGCTCT	61.201	55.000	0.00	0.00	0.00	4.09
2129	2636	0.744771	GACTTGTGGATTCGGGGCTC	60.745	60.000	0.00	0.00	0.00	4.70
2130	2637	1.299976	GACTTGTGGATTCGGGGCT	59.700	57.895	0.00	0.00	0.00	5.19
2131	2638	1.749258	GGACTTGTGGATTCGGGGC	60.749	63.158	0.00	0.00	0.00	5.80
2132	2639	0.676782	GTGGACTTGTGGATTCGGGG	60.677	60.000	0.00	0.00	0.00	5.73
2133	2640	0.036164	TGTGGACTTGTGGATTCGGG	59.964	55.000	0.00	0.00	0.00	5.14
2134	2641	1.270839	ACTGTGGACTTGTGGATTCGG	60.271	52.381	0.00	0.00	0.00	4.30
2135	2642	2.169832	ACTGTGGACTTGTGGATTCG	57.830	50.000	0.00	0.00	0.00	3.34
2136	2643	4.385825	TGTAACTGTGGACTTGTGGATTC	58.614	43.478	0.00	0.00	0.00	2.52
2137	2644	4.431416	TGTAACTGTGGACTTGTGGATT	57.569	40.909	0.00	0.00	0.00	3.01
2138	2645	4.041567	TCATGTAACTGTGGACTTGTGGAT	59.958	41.667	0.00	0.00	0.00	3.41
2139	2646	3.389656	TCATGTAACTGTGGACTTGTGGA	59.610	43.478	0.00	0.00	0.00	4.02
2140	2647	3.738982	TCATGTAACTGTGGACTTGTGG	58.261	45.455	0.00	0.00	0.00	4.17
2141	2648	5.947228	AATCATGTAACTGTGGACTTGTG	57.053	39.130	0.00	0.00	0.00	3.33
2142	2649	8.635765	AAATAATCATGTAACTGTGGACTTGT	57.364	30.769	0.00	0.00	0.00	3.16
2143	2650	9.988350	GTAAATAATCATGTAACTGTGGACTTG	57.012	33.333	0.00	3.81	0.00	3.16
2144	2651	9.733556	TGTAAATAATCATGTAACTGTGGACTT	57.266	29.630	0.00	0.00	0.00	3.01
2145	2652	9.905713	ATGTAAATAATCATGTAACTGTGGACT	57.094	29.630	0.00	0.00	0.00	3.85
2148	2655	9.650371	CGAATGTAAATAATCATGTAACTGTGG	57.350	33.333	0.00	0.00	0.00	4.17
2149	2656	9.650371	CCGAATGTAAATAATCATGTAACTGTG	57.350	33.333	0.00	0.00	0.00	3.66
2150	2657	9.607988	TCCGAATGTAAATAATCATGTAACTGT	57.392	29.630	0.00	0.00	0.00	3.55
2151	2658	9.864034	GTCCGAATGTAAATAATCATGTAACTG	57.136	33.333	0.00	0.00	0.00	3.16
2152	2659	9.832445	AGTCCGAATGTAAATAATCATGTAACT	57.168	29.630	0.00	0.00	0.00	2.24
2155	2662	8.974408	CGAAGTCCGAATGTAAATAATCATGTA	58.026	33.333	0.00	0.00	41.76	2.29
2156	2663	7.518370	GCGAAGTCCGAATGTAAATAATCATGT	60.518	37.037	0.00	0.00	41.76	3.21
2157	2664	6.792250	GCGAAGTCCGAATGTAAATAATCATG	59.208	38.462	0.00	0.00	41.76	3.07
2158	2665	6.073222	GGCGAAGTCCGAATGTAAATAATCAT	60.073	38.462	0.00	0.00	41.76	2.45
2159	2666	5.235616	GGCGAAGTCCGAATGTAAATAATCA	59.764	40.000	0.00	0.00	41.76	2.57
2160	2667	5.676953	GGCGAAGTCCGAATGTAAATAATC	58.323	41.667	0.00	0.00	41.76	1.75
2161	2668	5.668558	GGCGAAGTCCGAATGTAAATAAT	57.331	39.130	0.00	0.00	41.76	1.28
2175	2682	2.126031	GTGGTCTCGGGCGAAGTC	60.126	66.667	0.00	0.00	0.00	3.01
2176	2683	3.692406	GGTGGTCTCGGGCGAAGT	61.692	66.667	0.00	0.00	0.00	3.01
2177	2684	4.452733	GGGTGGTCTCGGGCGAAG	62.453	72.222	0.00	0.00	0.00	3.79
2182	2689	3.253838	TTTGGGGGTGGTCTCGGG	61.254	66.667	0.00	0.00	0.00	5.14
2183	2690	2.033602	GTTTGGGGGTGGTCTCGG	59.966	66.667	0.00	0.00	0.00	4.63
2184	2691	0.688487	TAAGTTTGGGGGTGGTCTCG	59.312	55.000	0.00	0.00	0.00	4.04
2185	2692	1.422402	TGTAAGTTTGGGGGTGGTCTC	59.578	52.381	0.00	0.00	0.00	3.36
2186	2693	1.525175	TGTAAGTTTGGGGGTGGTCT	58.475	50.000	0.00	0.00	0.00	3.85
2187	2694	2.368311	TTGTAAGTTTGGGGGTGGTC	57.632	50.000	0.00	0.00	0.00	4.02
2188	2695	2.673258	CTTTGTAAGTTTGGGGGTGGT	58.327	47.619	0.00	0.00	0.00	4.16
2189	2696	1.967779	CCTTTGTAAGTTTGGGGGTGG	59.032	52.381	0.00	0.00	0.00	4.61
2190	2697	2.626266	GTCCTTTGTAAGTTTGGGGGTG	59.374	50.000	0.00	0.00	0.00	4.61
2191	2698	2.516702	AGTCCTTTGTAAGTTTGGGGGT	59.483	45.455	0.00	0.00	0.00	4.95
2192	2699	3.238788	AGTCCTTTGTAAGTTTGGGGG	57.761	47.619	0.00	0.00	0.00	5.40
2193	2700	4.981812	AGTAGTCCTTTGTAAGTTTGGGG	58.018	43.478	0.00	0.00	0.00	4.96
2194	2701	4.689345	CGAGTAGTCCTTTGTAAGTTTGGG	59.311	45.833	0.00	0.00	0.00	4.12
2195	2702	4.689345	CCGAGTAGTCCTTTGTAAGTTTGG	59.311	45.833	0.00	0.00	0.00	3.28
2196	2703	5.176958	CACCGAGTAGTCCTTTGTAAGTTTG	59.823	44.000	0.00	0.00	0.00	2.93
2197	2704	5.163374	ACACCGAGTAGTCCTTTGTAAGTTT	60.163	40.000	0.00	0.00	0.00	2.66
2198	2705	4.343239	ACACCGAGTAGTCCTTTGTAAGTT	59.657	41.667	0.00	0.00	0.00	2.66
2199	2706	3.893813	ACACCGAGTAGTCCTTTGTAAGT	59.106	43.478	0.00	0.00	0.00	2.24
2200	2707	4.235360	CACACCGAGTAGTCCTTTGTAAG	58.765	47.826	0.00	0.00	0.00	2.34
2201	2708	3.006110	CCACACCGAGTAGTCCTTTGTAA	59.994	47.826	0.00	0.00	0.00	2.41
2202	2709	2.559668	CCACACCGAGTAGTCCTTTGTA	59.440	50.000	0.00	0.00	0.00	2.41
2203	2710	1.343465	CCACACCGAGTAGTCCTTTGT	59.657	52.381	0.00	0.00	0.00	2.83
2204	2711	1.337823	CCCACACCGAGTAGTCCTTTG	60.338	57.143	0.00	0.00	0.00	2.77
2205	2712	0.974383	CCCACACCGAGTAGTCCTTT	59.026	55.000	0.00	0.00	0.00	3.11
2206	2713	0.178941	ACCCACACCGAGTAGTCCTT	60.179	55.000	0.00	0.00	0.00	3.36
2207	2714	0.178941	AACCCACACCGAGTAGTCCT	60.179	55.000	0.00	0.00	0.00	3.85
2208	2715	0.683412	AAACCCACACCGAGTAGTCC	59.317	55.000	0.00	0.00	0.00	3.85
2209	2716	3.665745	TTAAACCCACACCGAGTAGTC	57.334	47.619	0.00	0.00	0.00	2.59
2210	2717	3.579586	TCATTAAACCCACACCGAGTAGT	59.420	43.478	0.00	0.00	0.00	2.73
2211	2718	4.196626	TCATTAAACCCACACCGAGTAG	57.803	45.455	0.00	0.00	0.00	2.57
2212	2719	4.620589	TTCATTAAACCCACACCGAGTA	57.379	40.909	0.00	0.00	0.00	2.59
2213	2720	3.495434	TTCATTAAACCCACACCGAGT	57.505	42.857	0.00	0.00	0.00	4.18
2214	2721	5.160641	CAAATTCATTAAACCCACACCGAG	58.839	41.667	0.00	0.00	0.00	4.63
2215	2722	4.559704	GCAAATTCATTAAACCCACACCGA	60.560	41.667	0.00	0.00	0.00	4.69
2216	2723	3.677596	GCAAATTCATTAAACCCACACCG	59.322	43.478	0.00	0.00	0.00	4.94
2217	2724	4.893608	AGCAAATTCATTAAACCCACACC	58.106	39.130	0.00	0.00	0.00	4.16
2218	2725	4.621034	CGAGCAAATTCATTAAACCCACAC	59.379	41.667	0.00	0.00	0.00	3.82
2219	2726	4.804108	CGAGCAAATTCATTAAACCCACA	58.196	39.130	0.00	0.00	0.00	4.17
2220	2727	3.612423	GCGAGCAAATTCATTAAACCCAC	59.388	43.478	0.00	0.00	0.00	4.61
2221	2728	3.509575	AGCGAGCAAATTCATTAAACCCA	59.490	39.130	0.00	0.00	0.00	4.51
2222	2729	4.110036	AGCGAGCAAATTCATTAAACCC	57.890	40.909	0.00	0.00	0.00	4.11
2223	2730	7.755582	ATTTAGCGAGCAAATTCATTAAACC	57.244	32.000	0.00	0.00	0.00	3.27
2224	2731	8.321005	GGAATTTAGCGAGCAAATTCATTAAAC	58.679	33.333	26.67	15.73	46.84	2.01
2225	2732	8.250332	AGGAATTTAGCGAGCAAATTCATTAAA	58.750	29.630	26.67	12.47	46.84	1.52
2226	2733	7.771183	AGGAATTTAGCGAGCAAATTCATTAA	58.229	30.769	26.67	6.57	46.84	1.40
2227	2734	7.333528	AGGAATTTAGCGAGCAAATTCATTA	57.666	32.000	26.67	2.05	46.84	1.90
2228	2735	6.212888	AGGAATTTAGCGAGCAAATTCATT	57.787	33.333	26.67	19.05	46.84	2.57
2229	2736	5.841957	AGGAATTTAGCGAGCAAATTCAT	57.158	34.783	26.67	22.54	46.84	2.57
2230	2737	6.374333	AGTTAGGAATTTAGCGAGCAAATTCA	59.626	34.615	26.67	16.04	46.84	2.57
2231	2738	6.786207	AGTTAGGAATTTAGCGAGCAAATTC	58.214	36.000	22.48	22.48	45.41	2.17
2232	2739	6.183360	GGAGTTAGGAATTTAGCGAGCAAATT	60.183	38.462	13.71	13.71	38.09	1.82
2233	2740	5.297029	GGAGTTAGGAATTTAGCGAGCAAAT	59.703	40.000	0.00	0.00	0.00	2.32
2238	2745	4.991687	GGATGGAGTTAGGAATTTAGCGAG	59.008	45.833	0.00	0.00	0.00	5.03
2271	2778	7.206981	ACATGAAAGAACTCACACTATTTGG	57.793	36.000	0.00	0.00	0.00	3.28
2272	2779	8.993121	AGTACATGAAAGAACTCACACTATTTG	58.007	33.333	0.00	0.00	0.00	2.32
2273	2780	8.993121	CAGTACATGAAAGAACTCACACTATTT	58.007	33.333	0.00	0.00	0.00	1.40
2311	2852	8.569641	GTCTACATTATGGAACGAAGAGAGTAT	58.430	37.037	0.00	0.00	0.00	2.12
2479	3020	9.139174	CAAGTTTGCGGAGAAAAATATTTACAT	57.861	29.630	0.01	0.00	0.00	2.29
2547	3088	6.291377	ACTTACTCCGTCCGATAATGTAGTA	58.709	40.000	0.00	0.00	0.00	1.82

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.