Multiple sequence alignment - TraesCS1A01G161800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G161800 chr1A 100.000 3153 0 0 788 3940 290551889 290548737 0.000000e+00 5823.0
1 TraesCS1A01G161800 chr1A 100.000 503 0 0 1 503 290552676 290552174 0.000000e+00 929.0
2 TraesCS1A01G161800 chr1D 92.713 892 45 9 2422 3304 224116990 224116110 0.000000e+00 1269.0
3 TraesCS1A01G161800 chr1D 92.671 805 49 5 794 1593 224118712 224117913 0.000000e+00 1151.0
4 TraesCS1A01G161800 chr1D 90.385 832 56 16 1782 2597 224117681 224116858 0.000000e+00 1072.0
5 TraesCS1A01G161800 chr1B 93.160 731 36 4 2422 3142 323621253 323620527 0.000000e+00 1061.0
6 TraesCS1A01G161800 chr1B 86.947 904 70 22 1691 2585 323621996 323621132 0.000000e+00 972.0
7 TraesCS1A01G161800 chr1B 91.042 480 34 2 810 1286 323632042 323631569 1.190000e-179 640.0
8 TraesCS1A01G161800 chr1B 87.500 400 41 9 81 478 323632437 323632045 1.670000e-123 453.0
9 TraesCS1A01G161800 chr1B 91.279 172 12 2 1284 1455 323630441 323630273 8.510000e-57 231.0
10 TraesCS1A01G161800 chr1B 91.124 169 7 7 3138 3304 323620274 323620112 5.120000e-54 222.0
11 TraesCS1A01G161800 chr2D 91.877 357 25 1 3509 3861 356032861 356033217 2.730000e-136 496.0
12 TraesCS1A01G161800 chr2D 100.000 29 0 0 408 436 409257758 409257786 2.000000e-03 54.7
13 TraesCS1A01G161800 chr6B 79.420 379 55 8 3509 3865 16542590 16542213 3.040000e-61 246.0
14 TraesCS1A01G161800 chr4B 86.420 162 15 2 3509 3664 181004430 181004270 1.880000e-38 171.0
15 TraesCS1A01G161800 chr2B 83.607 61 9 1 376 436 483998568 483998627 5.500000e-04 56.5
16 TraesCS1A01G161800 chr6A 100.000 29 0 0 1663 1691 107864426 107864454 2.000000e-03 54.7
17 TraesCS1A01G161800 chr6A 100.000 28 0 0 1663 1690 30200518 30200491 7.000000e-03 52.8
18 TraesCS1A01G161800 chr7D 100.000 28 0 0 413 440 230381281 230381308 7.000000e-03 52.8
19 TraesCS1A01G161800 chr7A 100.000 28 0 0 1663 1690 229030336 229030363 7.000000e-03 52.8
20 TraesCS1A01G161800 chr3A 100.000 28 0 0 1 28 729609071 729609098 7.000000e-03 52.8
21 TraesCS1A01G161800 chr2A 100.000 28 0 0 1663 1690 593437867 593437840 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G161800 chr1A 290548737 290552676 3939 True 3376.000000 5823 100.000000 1 3940 2 chr1A.!!$R1 3939
1 TraesCS1A01G161800 chr1D 224116110 224118712 2602 True 1164.000000 1269 91.923000 794 3304 3 chr1D.!!$R1 2510
2 TraesCS1A01G161800 chr1B 323620112 323621996 1884 True 751.666667 1061 90.410333 1691 3304 3 chr1B.!!$R1 1613
3 TraesCS1A01G161800 chr1B 323630273 323632437 2164 True 441.333333 640 89.940333 81 1455 3 chr1B.!!$R2 1374


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
212 213 0.179012 TTTTCACCAAGGGACGGACC 60.179 55.0 0.00 0.0 38.08 4.46 F
1167 1176 0.252742 CTCCTCCCCCACAGGTTAGT 60.253 60.0 0.00 0.0 32.20 2.24 F
1319 2458 0.458025 GATTCGTTTCCTCCTCGCGT 60.458 55.0 5.77 0.0 0.00 6.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1408 2547 0.175073 ACGGAAGAGGCACGAATACC 59.825 55.0 0.00 0.0 0.0 2.73 R
2230 3464 0.529337 CGCCTGATACTGCCTCTGTG 60.529 60.0 0.00 0.0 0.0 3.66 R
3305 4849 0.038526 AAGAGGTTGCGACTACACCG 60.039 55.0 3.59 0.0 0.0 4.94 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 9.253832 ACCAAATCAATACCATTAGAATGAACA 57.746 29.630 3.76 0.00 38.70 3.18
149 150 5.649395 ACTTAGGTCACAGCTAATACGTGTA 59.351 40.000 0.00 0.00 37.52 2.90
155 156 6.976925 GGTCACAGCTAATACGTGTAGTAAAT 59.023 38.462 0.00 0.00 39.04 1.40
202 203 6.957920 TCATGAAGAGACATTTTTCACCAA 57.042 33.333 0.00 0.00 34.04 3.67
206 207 4.453480 AGAGACATTTTTCACCAAGGGA 57.547 40.909 0.00 0.00 0.00 4.20
212 213 0.179012 TTTTCACCAAGGGACGGACC 60.179 55.000 0.00 0.00 38.08 4.46
228 229 2.093869 CGGACCTCTTTTCATTACGGGA 60.094 50.000 0.00 0.00 0.00 5.14
269 270 9.606631 AAGAGACATCTTTTGACTATCCATAAC 57.393 33.333 0.00 0.00 43.45 1.89
277 278 8.762645 TCTTTTGACTATCCATAACAGACATCT 58.237 33.333 0.00 0.00 0.00 2.90
292 293 5.239525 ACAGACATCTTTTTCACTAAGGTGC 59.760 40.000 0.00 0.00 42.72 5.01
297 298 4.448210 TCTTTTTCACTAAGGTGCGAGTT 58.552 39.130 0.00 0.00 42.72 3.01
298 299 4.879545 TCTTTTTCACTAAGGTGCGAGTTT 59.120 37.500 0.00 0.00 42.72 2.66
299 300 5.355910 TCTTTTTCACTAAGGTGCGAGTTTT 59.644 36.000 0.00 0.00 42.72 2.43
328 329 7.975616 CACAAATAGACATATTTTCACTTGGGG 59.024 37.037 0.00 0.00 39.15 4.96
347 348 2.427095 GGGACATGTATTTTGGAGGTGC 59.573 50.000 0.00 0.00 0.00 5.01
351 352 4.159557 ACATGTATTTTGGAGGTGCCTTT 58.840 39.130 0.00 0.00 37.63 3.11
356 357 3.744238 TTTTGGAGGTGCCTTTTAAGC 57.256 42.857 0.00 0.00 37.63 3.09
367 368 6.380846 AGGTGCCTTTTAAGCAAATATCATGA 59.619 34.615 0.00 0.00 43.02 3.07
368 369 6.698766 GGTGCCTTTTAAGCAAATATCATGAG 59.301 38.462 0.09 0.00 43.02 2.90
373 374 9.941664 CCTTTTAAGCAAATATCATGAGTACTG 57.058 33.333 0.00 0.00 0.00 2.74
386 387 7.435068 TCATGAGTACTGTTCTTTTTAAGGC 57.565 36.000 0.00 0.00 0.00 4.35
393 394 4.578928 ACTGTTCTTTTTAAGGCGACATGT 59.421 37.500 0.00 0.00 0.00 3.21
434 435 8.856153 TGCATTAGGAGTCAGTTTTACAATAA 57.144 30.769 0.00 0.00 0.00 1.40
435 436 9.290988 TGCATTAGGAGTCAGTTTTACAATAAA 57.709 29.630 0.00 0.00 0.00 1.40
484 486 7.569599 TTTTTCCCCTCTAATAGAAGTCAGT 57.430 36.000 0.00 0.00 0.00 3.41
485 487 7.569599 TTTTCCCCTCTAATAGAAGTCAGTT 57.430 36.000 0.00 0.00 0.00 3.16
486 488 7.569599 TTTCCCCTCTAATAGAAGTCAGTTT 57.430 36.000 0.00 0.00 0.00 2.66
487 489 7.569599 TTCCCCTCTAATAGAAGTCAGTTTT 57.430 36.000 0.00 0.00 0.00 2.43
488 490 8.674925 TTCCCCTCTAATAGAAGTCAGTTTTA 57.325 34.615 0.00 0.00 0.00 1.52
489 491 8.075761 TCCCCTCTAATAGAAGTCAGTTTTAC 57.924 38.462 0.00 0.00 0.00 2.01
490 492 7.676893 TCCCCTCTAATAGAAGTCAGTTTTACA 59.323 37.037 0.00 0.00 0.00 2.41
491 493 8.487028 CCCCTCTAATAGAAGTCAGTTTTACAT 58.513 37.037 0.00 0.00 0.00 2.29
492 494 9.319143 CCCTCTAATAGAAGTCAGTTTTACATG 57.681 37.037 0.00 0.00 0.00 3.21
493 495 9.877178 CCTCTAATAGAAGTCAGTTTTACATGT 57.123 33.333 2.69 2.69 0.00 3.21
500 502 8.281212 AGAAGTCAGTTTTACATGTTGTTTCT 57.719 30.769 2.30 7.29 0.00 2.52
501 503 9.391006 AGAAGTCAGTTTTACATGTTGTTTCTA 57.609 29.630 2.30 0.00 0.00 2.10
502 504 9.997482 GAAGTCAGTTTTACATGTTGTTTCTAA 57.003 29.630 2.30 0.00 0.00 2.10
831 833 8.348285 ACAGTAGCAAAAATATCTTTTAGCCA 57.652 30.769 0.00 0.00 33.44 4.75
866 868 1.732259 GTGATGTGAACCAACGCTAGG 59.268 52.381 0.00 0.00 0.00 3.02
895 897 0.631998 ATCCCCTCTCCTCCCTCTCA 60.632 60.000 0.00 0.00 0.00 3.27
908 910 4.163839 CCTCCCTCTCATCTTCAAAGTCAT 59.836 45.833 0.00 0.00 0.00 3.06
909 911 5.365025 CCTCCCTCTCATCTTCAAAGTCATA 59.635 44.000 0.00 0.00 0.00 2.15
910 912 6.043012 CCTCCCTCTCATCTTCAAAGTCATAT 59.957 42.308 0.00 0.00 0.00 1.78
911 913 7.234371 CCTCCCTCTCATCTTCAAAGTCATATA 59.766 40.741 0.00 0.00 0.00 0.86
912 914 8.187913 TCCCTCTCATCTTCAAAGTCATATAG 57.812 38.462 0.00 0.00 0.00 1.31
913 915 6.873076 CCCTCTCATCTTCAAAGTCATATAGC 59.127 42.308 0.00 0.00 0.00 2.97
933 939 4.781934 AGCTCCCACTAATTAACCACATC 58.218 43.478 0.00 0.00 0.00 3.06
934 940 4.475016 AGCTCCCACTAATTAACCACATCT 59.525 41.667 0.00 0.00 0.00 2.90
955 961 1.135046 CTGTGTTCACGCTCTCACTG 58.865 55.000 0.00 0.00 0.00 3.66
977 986 4.051237 GCTTCACATCCTGAAAAACAACC 58.949 43.478 0.00 0.00 38.47 3.77
1012 1021 4.336713 GCTTTGAGTCCATGAAATACTCCC 59.663 45.833 0.00 0.00 39.10 4.30
1017 1026 3.395941 AGTCCATGAAATACTCCCATCCC 59.604 47.826 0.00 0.00 0.00 3.85
1030 1039 1.598962 CATCCCGCAATGCCGATCT 60.599 57.895 0.00 0.00 0.00 2.75
1167 1176 0.252742 CTCCTCCCCCACAGGTTAGT 60.253 60.000 0.00 0.00 32.20 2.24
1265 1274 5.239306 TGGATTTGCATCTCGATTGTATTCC 59.761 40.000 0.00 0.00 0.00 3.01
1269 1278 5.282055 TGCATCTCGATTGTATTCCTCTT 57.718 39.130 0.00 0.00 0.00 2.85
1280 1289 9.923143 CGATTGTATTCCTCTTAACATGGTATA 57.077 33.333 0.00 0.00 0.00 1.47
1319 2458 0.458025 GATTCGTTTCCTCCTCGCGT 60.458 55.000 5.77 0.00 0.00 6.01
1348 2487 7.403421 CAGTTAGTTTTCATGTGTGTTTACGA 58.597 34.615 0.00 0.00 0.00 3.43
1403 2542 4.021104 AGCTTCACATCACAGTGCTAGTTA 60.021 41.667 0.00 0.00 39.35 2.24
1408 2547 4.793731 CACATCACAGTGCTAGTTAGTACG 59.206 45.833 0.00 0.00 42.66 3.67
1426 2565 0.870307 CGGTATTCGTGCCTCTTCCG 60.870 60.000 0.00 0.00 0.00 4.30
1441 2580 4.197750 CTCTTCCGTAGCTAGAAGGTACA 58.802 47.826 17.94 3.50 46.45 2.90
1442 2581 4.592942 TCTTCCGTAGCTAGAAGGTACAA 58.407 43.478 17.94 3.89 46.45 2.41
1444 2583 3.960571 TCCGTAGCTAGAAGGTACAACT 58.039 45.455 14.55 0.00 46.45 3.16
1445 2584 3.693085 TCCGTAGCTAGAAGGTACAACTG 59.307 47.826 14.55 1.14 46.45 3.16
1446 2585 3.442977 CCGTAGCTAGAAGGTACAACTGT 59.557 47.826 14.55 0.00 46.45 3.55
1455 2594 6.038997 AGAAGGTACAACTGTAAGGATGTC 57.961 41.667 0.00 0.00 38.71 3.06
1480 2619 7.174946 TCGAGAGGATTCTTTTTGCTTACATTT 59.825 33.333 0.00 0.00 32.53 2.32
1513 2655 7.678194 TTTTCGCTTATTTTTCAGACTTGTG 57.322 32.000 0.00 0.00 0.00 3.33
1518 2660 6.467047 CGCTTATTTTTCAGACTTGTGCATAG 59.533 38.462 0.00 0.00 0.00 2.23
1521 2663 8.856153 TTATTTTTCAGACTTGTGCATAGGTA 57.144 30.769 0.00 0.00 0.00 3.08
1526 2668 5.804639 TCAGACTTGTGCATAGGTAATGTT 58.195 37.500 0.00 0.00 37.93 2.71
1536 2678 4.947388 GCATAGGTAATGTTTGGACCTTGA 59.053 41.667 0.00 0.00 40.85 3.02
1569 2711 9.296400 CTTTATCTTTGAAAACCTGTTTCGAAA 57.704 29.630 6.47 6.47 33.00 3.46
1570 2712 8.623310 TTATCTTTGAAAACCTGTTTCGAAAC 57.377 30.769 29.72 29.72 39.33 2.78
1574 2716 4.839796 TGAAAACCTGTTTCGAAACGATC 58.160 39.130 30.05 21.38 41.74 3.69
1579 2721 3.250040 ACCTGTTTCGAAACGATCCTTTG 59.750 43.478 30.05 16.41 41.74 2.77
1593 2735 4.320494 CGATCCTTTGTTTCAGTTTGGGAG 60.320 45.833 0.00 0.00 0.00 4.30
1594 2736 4.243793 TCCTTTGTTTCAGTTTGGGAGA 57.756 40.909 0.00 0.00 0.00 3.71
1595 2737 4.803452 TCCTTTGTTTCAGTTTGGGAGAT 58.197 39.130 0.00 0.00 0.00 2.75
1596 2738 5.208121 TCCTTTGTTTCAGTTTGGGAGATT 58.792 37.500 0.00 0.00 0.00 2.40
1597 2739 5.660864 TCCTTTGTTTCAGTTTGGGAGATTT 59.339 36.000 0.00 0.00 0.00 2.17
1598 2740 6.156083 TCCTTTGTTTCAGTTTGGGAGATTTT 59.844 34.615 0.00 0.00 0.00 1.82
1599 2741 6.823182 CCTTTGTTTCAGTTTGGGAGATTTTT 59.177 34.615 0.00 0.00 0.00 1.94
1628 2770 7.956127 GCGGATGCAGTTTGGGATTTTATCC 62.956 48.000 0.00 0.00 44.48 2.59
1752 2894 6.591062 GTCACAAATGTTGATGCCAAATACAT 59.409 34.615 0.00 0.00 33.49 2.29
1757 2899 2.687935 GTTGATGCCAAATACATCGGGT 59.312 45.455 0.00 0.00 45.61 5.28
1758 2900 3.847671 TGATGCCAAATACATCGGGTA 57.152 42.857 0.00 0.00 45.61 3.69
1768 2910 5.455056 AATACATCGGGTAAGCTGTAGAG 57.545 43.478 0.00 0.00 35.14 2.43
1821 3039 4.437682 TGGGACAGAAGTGAAATCAACT 57.562 40.909 0.00 0.00 0.00 3.16
1824 3042 6.361433 TGGGACAGAAGTGAAATCAACTAAA 58.639 36.000 0.00 0.00 0.00 1.85
1827 3045 7.308435 GGACAGAAGTGAAATCAACTAAATGG 58.692 38.462 0.00 0.00 0.00 3.16
1989 3212 6.005583 TCTGCAATTTGTTCTGTCAAGATC 57.994 37.500 0.00 0.00 30.72 2.75
2010 3233 6.491745 AGATCTCTATTATTGTTCGCCTCAGA 59.508 38.462 0.00 0.00 0.00 3.27
2088 3313 1.000060 CACAATGCCAGTGGAACAAGG 60.000 52.381 15.20 1.67 44.16 3.61
2188 3413 4.962836 GCACAGGCAGCACCAGGT 62.963 66.667 0.00 0.00 43.14 4.00
2204 3429 1.227943 GGTGCAGCCACAACAGAGA 60.228 57.895 4.03 0.00 43.88 3.10
2627 3912 4.641645 CCCACACCTGCCGCTCAA 62.642 66.667 0.00 0.00 0.00 3.02
2950 4235 2.821969 GAGCAACCTGACATTGTCCATT 59.178 45.455 14.05 3.32 0.00 3.16
3056 4341 4.278170 CCAGTGGTATCTGCAACTTTGAAA 59.722 41.667 0.00 0.00 34.47 2.69
3063 4348 6.363357 GGTATCTGCAACTTTGAAATTGTGTC 59.637 38.462 0.00 0.00 0.00 3.67
3068 4353 7.387397 TCTGCAACTTTGAAATTGTGTCTTTTT 59.613 29.630 0.00 0.00 0.00 1.94
3195 4739 4.025229 GTGTGTGCGACTCTGTTTTATTCA 60.025 41.667 0.00 0.00 0.00 2.57
3198 4742 3.125316 GTGCGACTCTGTTTTATTCAGGG 59.875 47.826 0.00 0.00 39.11 4.45
3232 4776 5.470098 ACGTTACAATTTCACTGAGCTGATT 59.530 36.000 0.00 0.00 0.00 2.57
3235 4779 7.467623 GTTACAATTTCACTGAGCTGATTAGG 58.532 38.462 0.00 0.00 0.00 2.69
3252 4796 7.915923 GCTGATTAGGACTTTAATTTAGCAACC 59.084 37.037 0.00 0.00 35.66 3.77
3297 4841 1.403323 GCAGCTCTCTAATGCCAAACC 59.597 52.381 0.00 0.00 33.81 3.27
3304 4848 4.101114 TCTCTAATGCCAAACCTAGTCCA 58.899 43.478 0.00 0.00 0.00 4.02
3305 4849 4.081087 TCTCTAATGCCAAACCTAGTCCAC 60.081 45.833 0.00 0.00 0.00 4.02
3306 4850 1.821216 AATGCCAAACCTAGTCCACG 58.179 50.000 0.00 0.00 0.00 4.94
3307 4851 0.035439 ATGCCAAACCTAGTCCACGG 60.035 55.000 0.00 0.00 0.00 4.94
3308 4852 1.373812 GCCAAACCTAGTCCACGGT 59.626 57.895 0.00 0.00 34.27 4.83
3309 4853 0.953960 GCCAAACCTAGTCCACGGTG 60.954 60.000 0.00 0.00 32.86 4.94
3310 4854 0.395312 CCAAACCTAGTCCACGGTGT 59.605 55.000 7.45 0.00 32.86 4.16
3311 4855 1.619827 CCAAACCTAGTCCACGGTGTA 59.380 52.381 7.45 0.00 32.86 2.90
3312 4856 2.353406 CCAAACCTAGTCCACGGTGTAG 60.353 54.545 7.45 2.60 32.86 2.74
3313 4857 2.298163 CAAACCTAGTCCACGGTGTAGT 59.702 50.000 7.45 0.00 32.86 2.73
3314 4858 1.831580 ACCTAGTCCACGGTGTAGTC 58.168 55.000 7.45 0.00 30.90 2.59
3315 4859 0.731417 CCTAGTCCACGGTGTAGTCG 59.269 60.000 7.45 0.00 0.00 4.18
3316 4860 0.098376 CTAGTCCACGGTGTAGTCGC 59.902 60.000 7.45 0.00 0.00 5.19
3317 4861 0.606130 TAGTCCACGGTGTAGTCGCA 60.606 55.000 7.45 0.00 0.00 5.10
3318 4862 1.007038 GTCCACGGTGTAGTCGCAA 60.007 57.895 7.45 0.00 0.00 4.85
3319 4863 1.007038 TCCACGGTGTAGTCGCAAC 60.007 57.895 7.45 0.00 0.00 4.17
3320 4864 2.025418 CCACGGTGTAGTCGCAACC 61.025 63.158 7.45 0.00 0.00 3.77
3321 4865 1.006571 CACGGTGTAGTCGCAACCT 60.007 57.895 0.00 0.00 0.00 3.50
3322 4866 1.007336 CACGGTGTAGTCGCAACCTC 61.007 60.000 0.00 0.00 0.00 3.85
3323 4867 1.177256 ACGGTGTAGTCGCAACCTCT 61.177 55.000 0.00 0.00 0.00 3.69
3324 4868 0.038526 CGGTGTAGTCGCAACCTCTT 60.039 55.000 0.00 0.00 0.00 2.85
3325 4869 1.429463 GGTGTAGTCGCAACCTCTTG 58.571 55.000 0.00 0.00 0.00 3.02
3333 4877 3.153024 GCAACCTCTTGCGTATCCA 57.847 52.632 0.00 0.00 43.42 3.41
3334 4878 1.668419 GCAACCTCTTGCGTATCCAT 58.332 50.000 0.00 0.00 43.42 3.41
3335 4879 1.599542 GCAACCTCTTGCGTATCCATC 59.400 52.381 0.00 0.00 43.42 3.51
3336 4880 2.905075 CAACCTCTTGCGTATCCATCA 58.095 47.619 0.00 0.00 0.00 3.07
3337 4881 2.604046 ACCTCTTGCGTATCCATCAC 57.396 50.000 0.00 0.00 0.00 3.06
3338 4882 1.139058 ACCTCTTGCGTATCCATCACC 59.861 52.381 0.00 0.00 0.00 4.02
3339 4883 1.491670 CTCTTGCGTATCCATCACCG 58.508 55.000 0.00 0.00 0.00 4.94
3340 4884 0.529773 TCTTGCGTATCCATCACCGC 60.530 55.000 0.00 0.00 45.92 5.68
3341 4885 1.498865 CTTGCGTATCCATCACCGCC 61.499 60.000 0.00 0.00 45.18 6.13
3342 4886 1.966901 TTGCGTATCCATCACCGCCT 61.967 55.000 0.00 0.00 45.18 5.52
3343 4887 1.227556 GCGTATCCATCACCGCCTT 60.228 57.895 0.00 0.00 40.25 4.35
3344 4888 1.222115 GCGTATCCATCACCGCCTTC 61.222 60.000 0.00 0.00 40.25 3.46
3345 4889 0.104120 CGTATCCATCACCGCCTTCA 59.896 55.000 0.00 0.00 0.00 3.02
3346 4890 1.583054 GTATCCATCACCGCCTTCAC 58.417 55.000 0.00 0.00 0.00 3.18
3347 4891 0.468226 TATCCATCACCGCCTTCACC 59.532 55.000 0.00 0.00 0.00 4.02
3348 4892 1.561769 ATCCATCACCGCCTTCACCA 61.562 55.000 0.00 0.00 0.00 4.17
3349 4893 1.077501 CCATCACCGCCTTCACCAT 60.078 57.895 0.00 0.00 0.00 3.55
3350 4894 1.097547 CCATCACCGCCTTCACCATC 61.098 60.000 0.00 0.00 0.00 3.51
3351 4895 0.392863 CATCACCGCCTTCACCATCA 60.393 55.000 0.00 0.00 0.00 3.07
3352 4896 0.548031 ATCACCGCCTTCACCATCAT 59.452 50.000 0.00 0.00 0.00 2.45
3353 4897 0.327924 TCACCGCCTTCACCATCATT 59.672 50.000 0.00 0.00 0.00 2.57
3354 4898 0.452987 CACCGCCTTCACCATCATTG 59.547 55.000 0.00 0.00 0.00 2.82
3355 4899 0.038166 ACCGCCTTCACCATCATTGT 59.962 50.000 0.00 0.00 0.00 2.71
3356 4900 0.734889 CCGCCTTCACCATCATTGTC 59.265 55.000 0.00 0.00 0.00 3.18
3357 4901 0.374758 CGCCTTCACCATCATTGTCG 59.625 55.000 0.00 0.00 0.00 4.35
3358 4902 1.453155 GCCTTCACCATCATTGTCGT 58.547 50.000 0.00 0.00 0.00 4.34
3359 4903 1.131126 GCCTTCACCATCATTGTCGTG 59.869 52.381 0.00 0.00 0.00 4.35
3360 4904 2.698803 CCTTCACCATCATTGTCGTGA 58.301 47.619 0.00 0.00 33.56 4.35
3361 4905 3.073678 CCTTCACCATCATTGTCGTGAA 58.926 45.455 12.17 12.17 41.60 3.18
3362 4906 3.691118 CCTTCACCATCATTGTCGTGAAT 59.309 43.478 12.77 0.00 42.57 2.57
3363 4907 4.437794 CCTTCACCATCATTGTCGTGAATG 60.438 45.833 12.77 8.84 42.57 2.67
3364 4908 3.673902 TCACCATCATTGTCGTGAATGT 58.326 40.909 8.38 0.00 35.25 2.71
3365 4909 3.684305 TCACCATCATTGTCGTGAATGTC 59.316 43.478 8.38 0.00 35.25 3.06
3366 4910 2.672874 ACCATCATTGTCGTGAATGTCG 59.327 45.455 8.38 0.00 35.25 4.35
3367 4911 2.672874 CCATCATTGTCGTGAATGTCGT 59.327 45.455 8.38 0.00 35.25 4.34
3368 4912 3.242091 CCATCATTGTCGTGAATGTCGTC 60.242 47.826 8.38 0.00 35.25 4.20
3369 4913 3.019933 TCATTGTCGTGAATGTCGTCA 57.980 42.857 8.38 0.00 35.25 4.35
3370 4914 2.729360 TCATTGTCGTGAATGTCGTCAC 59.271 45.455 8.38 0.00 43.75 3.67
3371 4915 2.211353 TTGTCGTGAATGTCGTCACA 57.789 45.000 6.19 0.00 46.90 3.58
3372 4916 1.483316 TGTCGTGAATGTCGTCACAC 58.517 50.000 6.19 0.06 46.90 3.82
3373 4917 1.202313 TGTCGTGAATGTCGTCACACA 60.202 47.619 6.19 6.39 46.90 3.72
3374 4918 1.189446 GTCGTGAATGTCGTCACACAC 59.811 52.381 6.19 7.55 46.90 3.82
3375 4919 0.506932 CGTGAATGTCGTCACACACC 59.493 55.000 12.42 0.00 46.90 4.16
3376 4920 0.506932 GTGAATGTCGTCACACACCG 59.493 55.000 8.84 0.00 46.00 4.94
3377 4921 0.598942 TGAATGTCGTCACACACCGG 60.599 55.000 0.00 0.00 34.48 5.28
3378 4922 0.319211 GAATGTCGTCACACACCGGA 60.319 55.000 9.46 0.00 34.48 5.14
3379 4923 0.320374 AATGTCGTCACACACCGGAT 59.680 50.000 9.46 0.00 34.48 4.18
3380 4924 0.108804 ATGTCGTCACACACCGGATC 60.109 55.000 9.46 0.00 34.48 3.36
3381 4925 1.287815 GTCGTCACACACCGGATCA 59.712 57.895 9.46 0.00 0.00 2.92
3382 4926 0.108804 GTCGTCACACACCGGATCAT 60.109 55.000 9.46 0.00 0.00 2.45
3383 4927 0.172578 TCGTCACACACCGGATCATC 59.827 55.000 9.46 0.00 0.00 2.92
3384 4928 1.139816 CGTCACACACCGGATCATCG 61.140 60.000 9.46 0.00 0.00 3.84
3385 4929 1.153647 TCACACACCGGATCATCGC 60.154 57.895 9.46 0.00 0.00 4.58
3386 4930 1.153568 CACACACCGGATCATCGCT 60.154 57.895 9.46 0.00 0.00 4.93
3387 4931 1.153568 ACACACCGGATCATCGCTG 60.154 57.895 9.46 0.00 0.00 5.18
3388 4932 1.141665 CACACCGGATCATCGCTGA 59.858 57.895 9.46 0.00 35.41 4.26
3389 4933 0.249615 CACACCGGATCATCGCTGAT 60.250 55.000 9.46 0.43 44.93 2.90
3390 4934 0.465705 ACACCGGATCATCGCTGATT 59.534 50.000 9.46 0.00 42.27 2.57
3391 4935 0.863799 CACCGGATCATCGCTGATTG 59.136 55.000 9.46 0.00 42.27 2.67
3392 4936 0.250038 ACCGGATCATCGCTGATTGG 60.250 55.000 9.46 15.74 42.27 3.16
3393 4937 0.033920 CCGGATCATCGCTGATTGGA 59.966 55.000 13.31 0.00 42.27 3.53
3394 4938 1.426423 CGGATCATCGCTGATTGGAG 58.574 55.000 2.84 0.00 42.27 3.86
3395 4939 1.805869 GGATCATCGCTGATTGGAGG 58.194 55.000 2.84 0.00 42.27 4.30
3396 4940 1.071385 GGATCATCGCTGATTGGAGGT 59.929 52.381 2.84 0.00 42.27 3.85
3397 4941 2.411904 GATCATCGCTGATTGGAGGTC 58.588 52.381 2.84 0.00 42.27 3.85
3398 4942 1.489481 TCATCGCTGATTGGAGGTCT 58.511 50.000 0.00 0.00 0.00 3.85
3399 4943 1.410517 TCATCGCTGATTGGAGGTCTC 59.589 52.381 0.00 0.00 0.00 3.36
3400 4944 1.137675 CATCGCTGATTGGAGGTCTCA 59.862 52.381 0.14 0.00 0.00 3.27
3401 4945 1.489481 TCGCTGATTGGAGGTCTCAT 58.511 50.000 0.14 0.00 0.00 2.90
3402 4946 2.666317 TCGCTGATTGGAGGTCTCATA 58.334 47.619 0.14 0.00 0.00 2.15
3403 4947 2.362397 TCGCTGATTGGAGGTCTCATAC 59.638 50.000 0.14 0.00 0.00 2.39
3404 4948 2.363680 CGCTGATTGGAGGTCTCATACT 59.636 50.000 0.14 0.00 0.00 2.12
3405 4949 3.551863 CGCTGATTGGAGGTCTCATACTC 60.552 52.174 0.14 0.00 0.00 2.59
3413 4957 4.864704 GAGGTCTCATACTCCTCCAATC 57.135 50.000 0.00 0.00 41.09 2.67
3414 4958 4.479158 GAGGTCTCATACTCCTCCAATCT 58.521 47.826 0.00 0.00 41.09 2.40
3415 4959 4.479158 AGGTCTCATACTCCTCCAATCTC 58.521 47.826 0.00 0.00 0.00 2.75
3416 4960 3.576550 GGTCTCATACTCCTCCAATCTCC 59.423 52.174 0.00 0.00 0.00 3.71
3417 4961 3.254657 GTCTCATACTCCTCCAATCTCCG 59.745 52.174 0.00 0.00 0.00 4.63
3418 4962 3.138468 TCTCATACTCCTCCAATCTCCGA 59.862 47.826 0.00 0.00 0.00 4.55
3419 4963 4.085733 CTCATACTCCTCCAATCTCCGAT 58.914 47.826 0.00 0.00 0.00 4.18
3420 4964 3.829026 TCATACTCCTCCAATCTCCGATG 59.171 47.826 0.00 0.00 0.00 3.84
3421 4965 0.755686 ACTCCTCCAATCTCCGATGC 59.244 55.000 0.00 0.00 0.00 3.91
3422 4966 0.755079 CTCCTCCAATCTCCGATGCA 59.245 55.000 0.00 0.00 0.00 3.96
3423 4967 0.465705 TCCTCCAATCTCCGATGCAC 59.534 55.000 0.00 0.00 0.00 4.57
3424 4968 0.877649 CCTCCAATCTCCGATGCACG 60.878 60.000 0.00 0.00 42.18 5.34
3425 4969 1.493950 CTCCAATCTCCGATGCACGC 61.494 60.000 0.00 0.00 41.07 5.34
3426 4970 2.622629 CAATCTCCGATGCACGCG 59.377 61.111 3.53 3.53 41.07 6.01
3427 4971 2.167219 CAATCTCCGATGCACGCGT 61.167 57.895 5.58 5.58 41.07 6.01
3428 4972 2.167219 AATCTCCGATGCACGCGTG 61.167 57.895 34.01 34.01 41.07 5.34
3454 4998 3.686241 TCGGTCGATCTTATACATACCGG 59.314 47.826 0.00 0.00 46.28 5.28
3455 4999 3.686241 CGGTCGATCTTATACATACCGGA 59.314 47.826 9.46 0.00 43.45 5.14
3456 5000 4.201792 CGGTCGATCTTATACATACCGGAG 60.202 50.000 9.46 0.00 43.45 4.63
3457 5001 4.940046 GGTCGATCTTATACATACCGGAGA 59.060 45.833 9.46 0.00 0.00 3.71
3458 5002 5.064962 GGTCGATCTTATACATACCGGAGAG 59.935 48.000 9.46 0.00 0.00 3.20
3459 5003 5.873712 GTCGATCTTATACATACCGGAGAGA 59.126 44.000 9.46 0.00 0.00 3.10
3460 5004 6.539464 GTCGATCTTATACATACCGGAGAGAT 59.461 42.308 9.46 4.50 0.00 2.75
3461 5005 6.539103 TCGATCTTATACATACCGGAGAGATG 59.461 42.308 9.46 8.65 0.00 2.90
3462 5006 6.238511 CGATCTTATACATACCGGAGAGATGG 60.239 46.154 9.46 2.59 0.00 3.51
3463 5007 5.888901 TCTTATACATACCGGAGAGATGGT 58.111 41.667 9.46 0.00 42.34 3.55
3464 5008 6.312529 TCTTATACATACCGGAGAGATGGTT 58.687 40.000 9.46 1.15 39.70 3.67
3465 5009 4.873746 ATACATACCGGAGAGATGGTTG 57.126 45.455 9.46 0.00 39.70 3.77
3466 5010 1.139058 ACATACCGGAGAGATGGTTGC 59.861 52.381 9.46 0.00 39.70 4.17
3467 5011 1.414181 CATACCGGAGAGATGGTTGCT 59.586 52.381 9.46 0.00 39.70 3.91
3468 5012 1.112113 TACCGGAGAGATGGTTGCTC 58.888 55.000 9.46 0.00 39.70 4.26
3469 5013 1.227089 CCGGAGAGATGGTTGCTCG 60.227 63.158 0.00 0.00 37.46 5.03
3470 5014 1.667154 CCGGAGAGATGGTTGCTCGA 61.667 60.000 0.00 0.00 37.46 4.04
3471 5015 0.248825 CGGAGAGATGGTTGCTCGAG 60.249 60.000 8.45 8.45 37.46 4.04
3472 5016 1.107114 GGAGAGATGGTTGCTCGAGA 58.893 55.000 18.75 0.00 37.46 4.04
3473 5017 1.478510 GGAGAGATGGTTGCTCGAGAA 59.521 52.381 18.75 1.15 37.46 2.87
3474 5018 2.102252 GGAGAGATGGTTGCTCGAGAAT 59.898 50.000 18.75 0.45 37.46 2.40
3475 5019 3.380142 GAGAGATGGTTGCTCGAGAATC 58.620 50.000 18.75 4.46 37.46 2.52
3476 5020 3.030291 AGAGATGGTTGCTCGAGAATCT 58.970 45.455 18.75 14.45 37.46 2.40
3477 5021 4.211125 AGAGATGGTTGCTCGAGAATCTA 58.789 43.478 18.75 2.75 37.46 1.98
3478 5022 4.037446 AGAGATGGTTGCTCGAGAATCTAC 59.963 45.833 18.75 0.00 37.46 2.59
3479 5023 2.961526 TGGTTGCTCGAGAATCTACC 57.038 50.000 18.75 11.43 0.00 3.18
3480 5024 2.176045 TGGTTGCTCGAGAATCTACCA 58.824 47.619 18.75 14.25 32.16 3.25
3481 5025 2.766263 TGGTTGCTCGAGAATCTACCAT 59.234 45.455 18.75 0.00 29.78 3.55
3482 5026 3.197766 TGGTTGCTCGAGAATCTACCATT 59.802 43.478 18.75 0.00 29.78 3.16
3483 5027 3.557595 GGTTGCTCGAGAATCTACCATTG 59.442 47.826 18.75 0.00 0.00 2.82
3484 5028 4.433615 GTTGCTCGAGAATCTACCATTGA 58.566 43.478 18.75 0.00 0.00 2.57
3485 5029 4.736126 TGCTCGAGAATCTACCATTGAA 57.264 40.909 18.75 0.00 0.00 2.69
3486 5030 5.282055 TGCTCGAGAATCTACCATTGAAT 57.718 39.130 18.75 0.00 0.00 2.57
3487 5031 5.674525 TGCTCGAGAATCTACCATTGAATT 58.325 37.500 18.75 0.00 0.00 2.17
3488 5032 5.755375 TGCTCGAGAATCTACCATTGAATTC 59.245 40.000 18.75 0.00 0.00 2.17
3489 5033 5.178438 GCTCGAGAATCTACCATTGAATTCC 59.822 44.000 18.75 0.00 0.00 3.01
3490 5034 6.485830 TCGAGAATCTACCATTGAATTCCT 57.514 37.500 2.27 0.00 0.00 3.36
3491 5035 7.597288 TCGAGAATCTACCATTGAATTCCTA 57.403 36.000 2.27 0.00 0.00 2.94
3492 5036 8.195165 TCGAGAATCTACCATTGAATTCCTAT 57.805 34.615 2.27 0.00 0.00 2.57
3493 5037 8.090831 TCGAGAATCTACCATTGAATTCCTATG 58.909 37.037 2.27 6.81 0.00 2.23
3494 5038 7.875041 CGAGAATCTACCATTGAATTCCTATGT 59.125 37.037 2.27 0.00 0.00 2.29
3495 5039 9.213799 GAGAATCTACCATTGAATTCCTATGTC 57.786 37.037 2.27 0.58 0.00 3.06
3496 5040 8.717717 AGAATCTACCATTGAATTCCTATGTCA 58.282 33.333 2.27 0.00 0.00 3.58
3497 5041 9.512588 GAATCTACCATTGAATTCCTATGTCAT 57.487 33.333 2.27 0.00 0.00 3.06
3498 5042 9.872684 AATCTACCATTGAATTCCTATGTCATT 57.127 29.630 2.27 0.76 0.00 2.57
3500 5044 9.778741 TCTACCATTGAATTCCTATGTCATTAC 57.221 33.333 2.27 0.00 0.00 1.89
3501 5045 9.784531 CTACCATTGAATTCCTATGTCATTACT 57.215 33.333 2.27 0.00 0.00 2.24
3502 5046 8.682936 ACCATTGAATTCCTATGTCATTACTC 57.317 34.615 2.27 0.00 0.00 2.59
3503 5047 7.721399 ACCATTGAATTCCTATGTCATTACTCC 59.279 37.037 2.27 0.00 0.00 3.85
3504 5048 7.941238 CCATTGAATTCCTATGTCATTACTCCT 59.059 37.037 2.27 0.00 0.00 3.69
3505 5049 9.347240 CATTGAATTCCTATGTCATTACTCCTT 57.653 33.333 2.27 0.00 0.00 3.36
3506 5050 9.927081 ATTGAATTCCTATGTCATTACTCCTTT 57.073 29.630 2.27 0.00 0.00 3.11
3512 5056 8.135382 TCCTATGTCATTACTCCTTTATAGCC 57.865 38.462 0.00 0.00 0.00 3.93
3513 5057 7.036220 CCTATGTCATTACTCCTTTATAGCCG 58.964 42.308 0.00 0.00 0.00 5.52
3514 5058 4.628074 TGTCATTACTCCTTTATAGCCGC 58.372 43.478 0.00 0.00 0.00 6.53
3515 5059 3.673809 GTCATTACTCCTTTATAGCCGCG 59.326 47.826 0.00 0.00 0.00 6.46
3516 5060 2.144482 TTACTCCTTTATAGCCGCGC 57.856 50.000 0.00 0.00 0.00 6.86
3517 5061 0.316204 TACTCCTTTATAGCCGCGCC 59.684 55.000 0.00 0.00 0.00 6.53
3518 5062 2.022129 CTCCTTTATAGCCGCGCCG 61.022 63.158 0.00 0.00 0.00 6.46
3556 5100 4.416738 GGCCACCCACTGCCTCTC 62.417 72.222 0.00 0.00 44.46 3.20
3557 5101 4.767255 GCCACCCACTGCCTCTCG 62.767 72.222 0.00 0.00 0.00 4.04
3558 5102 4.767255 CCACCCACTGCCTCTCGC 62.767 72.222 0.00 0.00 38.31 5.03
3559 5103 4.767255 CACCCACTGCCTCTCGCC 62.767 72.222 0.00 0.00 36.24 5.54
3587 5131 3.550431 CCGGCCCTCGATGGACAT 61.550 66.667 13.48 0.00 42.43 3.06
3588 5132 2.029666 CGGCCCTCGATGGACATC 59.970 66.667 13.48 2.22 42.43 3.06
3589 5133 2.502492 CGGCCCTCGATGGACATCT 61.502 63.158 13.48 0.00 42.43 2.90
3590 5134 1.369321 GGCCCTCGATGGACATCTC 59.631 63.158 11.34 0.00 38.35 2.75
3591 5135 1.369321 GCCCTCGATGGACATCTCC 59.631 63.158 11.34 0.00 38.35 3.71
3592 5136 2.053618 CCCTCGATGGACATCTCCC 58.946 63.158 0.00 0.00 38.35 4.30
3593 5137 1.476007 CCCTCGATGGACATCTCCCC 61.476 65.000 0.00 0.00 38.35 4.81
3594 5138 1.476007 CCTCGATGGACATCTCCCCC 61.476 65.000 10.28 0.00 38.35 5.40
3635 5179 4.112341 GCGCTGGCTTGCCTCAAG 62.112 66.667 13.18 3.31 43.57 3.02
3636 5180 2.359107 CGCTGGCTTGCCTCAAGA 60.359 61.111 13.18 0.00 43.42 3.02
3640 5184 2.759795 GGCTTGCCTCAAGACCCT 59.240 61.111 10.44 0.00 43.16 4.34
3641 5185 1.377856 GGCTTGCCTCAAGACCCTC 60.378 63.158 10.44 0.00 43.16 4.30
3642 5186 1.377856 GCTTGCCTCAAGACCCTCC 60.378 63.158 10.44 0.00 43.42 4.30
3643 5187 1.846712 GCTTGCCTCAAGACCCTCCT 61.847 60.000 10.44 0.00 43.42 3.69
3644 5188 0.251634 CTTGCCTCAAGACCCTCCTC 59.748 60.000 0.50 0.00 43.42 3.71
3645 5189 1.201429 TTGCCTCAAGACCCTCCTCC 61.201 60.000 0.00 0.00 0.00 4.30
3646 5190 1.613630 GCCTCAAGACCCTCCTCCA 60.614 63.158 0.00 0.00 0.00 3.86
3647 5191 1.904990 GCCTCAAGACCCTCCTCCAC 61.905 65.000 0.00 0.00 0.00 4.02
3648 5192 0.252467 CCTCAAGACCCTCCTCCACT 60.252 60.000 0.00 0.00 0.00 4.00
3649 5193 0.901124 CTCAAGACCCTCCTCCACTG 59.099 60.000 0.00 0.00 0.00 3.66
3650 5194 0.545309 TCAAGACCCTCCTCCACTGG 60.545 60.000 0.00 0.00 0.00 4.00
3651 5195 0.545309 CAAGACCCTCCTCCACTGGA 60.545 60.000 0.00 0.00 34.52 3.86
3652 5196 0.419459 AAGACCCTCCTCCACTGGAT 59.581 55.000 0.00 0.00 35.30 3.41
3653 5197 0.031616 AGACCCTCCTCCACTGGATC 60.032 60.000 0.00 0.00 35.30 3.36
3654 5198 0.031616 GACCCTCCTCCACTGGATCT 60.032 60.000 0.00 0.00 35.30 2.75
3655 5199 1.218196 GACCCTCCTCCACTGGATCTA 59.782 57.143 0.00 0.00 35.30 1.98
3656 5200 1.219213 ACCCTCCTCCACTGGATCTAG 59.781 57.143 4.25 4.25 35.30 2.43
3657 5201 1.337118 CCTCCTCCACTGGATCTAGC 58.663 60.000 5.91 0.00 35.30 3.42
3658 5202 1.133199 CCTCCTCCACTGGATCTAGCT 60.133 57.143 5.91 0.00 35.30 3.32
3659 5203 2.238521 CTCCTCCACTGGATCTAGCTC 58.761 57.143 5.91 0.00 35.30 4.09
3660 5204 1.133325 TCCTCCACTGGATCTAGCTCC 60.133 57.143 5.91 5.63 35.74 4.70
3661 5205 0.958091 CTCCACTGGATCTAGCTCCG 59.042 60.000 5.91 5.69 38.21 4.63
3662 5206 0.259065 TCCACTGGATCTAGCTCCGT 59.741 55.000 5.91 6.27 38.21 4.69
3663 5207 0.387202 CCACTGGATCTAGCTCCGTG 59.613 60.000 20.90 20.90 38.21 4.94
3664 5208 0.387202 CACTGGATCTAGCTCCGTGG 59.613 60.000 20.45 11.60 38.21 4.94
3665 5209 1.365633 CTGGATCTAGCTCCGTGGC 59.634 63.158 8.08 0.00 38.21 5.01
3666 5210 1.381191 TGGATCTAGCTCCGTGGCA 60.381 57.895 8.08 0.00 38.21 4.92
3667 5211 0.760567 TGGATCTAGCTCCGTGGCAT 60.761 55.000 8.08 0.00 38.21 4.40
3668 5212 0.037790 GGATCTAGCTCCGTGGCATC 60.038 60.000 0.00 0.00 34.17 3.91
3669 5213 0.037790 GATCTAGCTCCGTGGCATCC 60.038 60.000 0.00 0.00 34.17 3.51
3670 5214 0.470833 ATCTAGCTCCGTGGCATCCT 60.471 55.000 0.00 0.00 34.17 3.24
3671 5215 1.109920 TCTAGCTCCGTGGCATCCTC 61.110 60.000 0.00 0.00 34.17 3.71
3672 5216 2.093537 CTAGCTCCGTGGCATCCTCC 62.094 65.000 0.00 0.00 34.17 4.30
3673 5217 2.589610 TAGCTCCGTGGCATCCTCCT 62.590 60.000 0.00 0.00 34.17 3.69
3674 5218 2.134287 GCTCCGTGGCATCCTCCTA 61.134 63.158 0.00 0.00 0.00 2.94
3675 5219 1.742768 CTCCGTGGCATCCTCCTAC 59.257 63.158 0.00 0.00 0.00 3.18
3676 5220 1.749334 CTCCGTGGCATCCTCCTACC 61.749 65.000 0.00 0.00 0.00 3.18
3677 5221 2.417516 CGTGGCATCCTCCTACCG 59.582 66.667 0.00 0.00 0.00 4.02
3678 5222 2.109181 GTGGCATCCTCCTACCGC 59.891 66.667 0.00 0.00 0.00 5.68
3679 5223 3.536917 TGGCATCCTCCTACCGCG 61.537 66.667 0.00 0.00 0.00 6.46
3680 5224 3.224324 GGCATCCTCCTACCGCGA 61.224 66.667 8.23 0.00 0.00 5.87
3681 5225 2.027751 GCATCCTCCTACCGCGAC 59.972 66.667 8.23 0.00 0.00 5.19
3682 5226 2.331805 CATCCTCCTACCGCGACG 59.668 66.667 8.23 0.00 0.00 5.12
3683 5227 3.593794 ATCCTCCTACCGCGACGC 61.594 66.667 8.23 10.49 0.00 5.19
3695 5239 4.821589 CGACGCCCTCCTTGCCTC 62.822 72.222 0.00 0.00 0.00 4.70
3696 5240 4.475135 GACGCCCTCCTTGCCTCC 62.475 72.222 0.00 0.00 0.00 4.30
3700 5244 3.415087 CCCTCCTTGCCTCCCCAG 61.415 72.222 0.00 0.00 0.00 4.45
3701 5245 4.120755 CCTCCTTGCCTCCCCAGC 62.121 72.222 0.00 0.00 0.00 4.85
3702 5246 4.120755 CTCCTTGCCTCCCCAGCC 62.121 72.222 0.00 0.00 0.00 4.85
3765 5309 4.368543 GGACCGCGGTCGAAGGTT 62.369 66.667 42.69 16.43 45.41 3.50
3766 5310 2.808321 GACCGCGGTCGAAGGTTC 60.808 66.667 39.77 17.91 38.57 3.62
3767 5311 3.562779 GACCGCGGTCGAAGGTTCA 62.563 63.158 39.77 0.00 38.57 3.18
3768 5312 3.110178 CCGCGGTCGAAGGTTCAC 61.110 66.667 19.50 0.00 38.10 3.18
3769 5313 3.110178 CGCGGTCGAAGGTTCACC 61.110 66.667 0.00 0.00 38.10 4.02
3770 5314 3.110178 GCGGTCGAAGGTTCACCG 61.110 66.667 20.27 20.27 45.70 4.94
3771 5315 3.110178 CGGTCGAAGGTTCACCGC 61.110 66.667 15.77 0.00 41.32 5.68
3772 5316 3.110178 GGTCGAAGGTTCACCGCG 61.110 66.667 0.00 0.00 42.08 6.46
3773 5317 2.355481 GTCGAAGGTTCACCGCGT 60.355 61.111 4.92 0.00 42.08 6.01
3774 5318 2.049802 TCGAAGGTTCACCGCGTC 60.050 61.111 4.92 0.00 42.08 5.19
3775 5319 3.467119 CGAAGGTTCACCGCGTCG 61.467 66.667 4.92 0.43 42.08 5.12
3776 5320 3.774702 GAAGGTTCACCGCGTCGC 61.775 66.667 7.29 7.29 42.08 5.19
3796 5340 3.842923 CGCTGTCGGAGGAGCCAT 61.843 66.667 3.92 0.00 35.94 4.40
3797 5341 2.202987 GCTGTCGGAGGAGCCATG 60.203 66.667 0.00 0.00 35.94 3.66
3798 5342 2.503061 CTGTCGGAGGAGCCATGG 59.497 66.667 7.63 7.63 35.94 3.66
3799 5343 3.746949 CTGTCGGAGGAGCCATGGC 62.747 68.421 30.12 30.12 42.33 4.40
3800 5344 3.785859 GTCGGAGGAGCCATGGCA 61.786 66.667 37.18 13.31 44.88 4.92
3801 5345 3.473647 TCGGAGGAGCCATGGCAG 61.474 66.667 37.18 19.98 44.88 4.85
3802 5346 4.559063 CGGAGGAGCCATGGCAGG 62.559 72.222 37.18 15.69 44.88 4.85
3877 5421 3.706373 CCCACTCCCTGGTCGGTG 61.706 72.222 0.00 0.00 38.60 4.94
3878 5422 3.706373 CCACTCCCTGGTCGGTGG 61.706 72.222 13.00 13.00 42.29 4.61
3879 5423 4.394712 CACTCCCTGGTCGGTGGC 62.395 72.222 0.00 0.00 0.00 5.01
3880 5424 4.640690 ACTCCCTGGTCGGTGGCT 62.641 66.667 0.00 0.00 0.00 4.75
3881 5425 4.087892 CTCCCTGGTCGGTGGCTG 62.088 72.222 0.00 0.00 0.00 4.85
3884 5428 4.704833 CCTGGTCGGTGGCTGGTG 62.705 72.222 0.00 0.00 0.00 4.17
3904 5448 4.479993 CCCGCTGCCTCTTCCCTG 62.480 72.222 0.00 0.00 0.00 4.45
3905 5449 4.479993 CCGCTGCCTCTTCCCTGG 62.480 72.222 0.00 0.00 0.00 4.45
3910 5454 2.194326 GCCTCTTCCCTGGCCATC 59.806 66.667 5.51 0.00 43.11 3.51
3911 5455 2.922234 CCTCTTCCCTGGCCATCC 59.078 66.667 5.51 0.00 0.00 3.51
3912 5456 2.507944 CTCTTCCCTGGCCATCCG 59.492 66.667 5.51 0.00 34.14 4.18
3913 5457 3.764160 CTCTTCCCTGGCCATCCGC 62.764 68.421 5.51 0.00 34.14 5.54
3914 5458 3.801997 CTTCCCTGGCCATCCGCT 61.802 66.667 5.51 0.00 37.74 5.52
3915 5459 3.764160 CTTCCCTGGCCATCCGCTC 62.764 68.421 5.51 0.00 37.74 5.03
3921 5465 4.467084 GGCCATCCGCTCGTGGAA 62.467 66.667 0.00 0.00 42.46 3.53
3922 5466 2.203070 GCCATCCGCTCGTGGAAT 60.203 61.111 2.97 0.00 42.46 3.01
3923 5467 2.537560 GCCATCCGCTCGTGGAATG 61.538 63.158 2.97 3.29 42.46 2.67
3924 5468 1.153369 CCATCCGCTCGTGGAATGT 60.153 57.895 2.97 0.00 42.46 2.71
3925 5469 1.154205 CCATCCGCTCGTGGAATGTC 61.154 60.000 2.97 0.00 42.46 3.06
3926 5470 1.226974 ATCCGCTCGTGGAATGTCG 60.227 57.895 2.97 0.00 42.46 4.35
3927 5471 3.554692 CCGCTCGTGGAATGTCGC 61.555 66.667 0.00 0.00 0.00 5.19
3928 5472 2.809174 CGCTCGTGGAATGTCGCA 60.809 61.111 0.00 0.00 0.00 5.10
3929 5473 2.379634 CGCTCGTGGAATGTCGCAA 61.380 57.895 0.00 0.00 0.00 4.85
3930 5474 1.421485 GCTCGTGGAATGTCGCAAG 59.579 57.895 0.00 0.00 0.00 4.01
3931 5475 1.970917 GCTCGTGGAATGTCGCAAGG 61.971 60.000 0.00 0.00 38.47 3.61
3932 5476 0.389817 CTCGTGGAATGTCGCAAGGA 60.390 55.000 0.00 0.00 38.47 3.36
3933 5477 0.669318 TCGTGGAATGTCGCAAGGAC 60.669 55.000 0.00 0.00 46.27 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 9.253832 TGTTCATTCTAATGGTATTGATTTGGT 57.746 29.630 3.00 0.00 37.03 3.67
144 145 8.943002 ACTCCCTTCATTTTTATTTACTACACG 58.057 33.333 0.00 0.00 0.00 4.49
179 180 6.016024 CCTTGGTGAAAAATGTCTCTTCATGA 60.016 38.462 0.00 0.00 32.08 3.07
193 194 0.179012 GGTCCGTCCCTTGGTGAAAA 60.179 55.000 0.00 0.00 0.00 2.29
202 203 1.657804 ATGAAAAGAGGTCCGTCCCT 58.342 50.000 0.00 0.00 37.62 4.20
206 207 2.354403 CCCGTAATGAAAAGAGGTCCGT 60.354 50.000 0.00 0.00 0.00 4.69
212 213 3.323243 ACACGTCCCGTAATGAAAAGAG 58.677 45.455 0.00 0.00 38.32 2.85
228 229 8.001881 AGATGTCTCTTCATAGAAATACACGT 57.998 34.615 0.00 0.00 0.00 4.49
263 264 8.454106 CCTTAGTGAAAAAGATGTCTGTTATGG 58.546 37.037 0.00 0.00 0.00 2.74
314 315 8.310382 CAAAATACATGTCCCCAAGTGAAAATA 58.690 33.333 0.00 0.00 0.00 1.40
325 326 3.023832 CACCTCCAAAATACATGTCCCC 58.976 50.000 0.00 0.00 0.00 4.81
328 329 3.356290 AGGCACCTCCAAAATACATGTC 58.644 45.455 0.00 0.00 37.29 3.06
347 348 9.941664 CAGTACTCATGATATTTGCTTAAAAGG 57.058 33.333 0.00 0.00 0.00 3.11
351 352 9.890629 AGAACAGTACTCATGATATTTGCTTAA 57.109 29.630 0.00 0.00 0.00 1.85
367 368 5.362263 TGTCGCCTTAAAAAGAACAGTACT 58.638 37.500 0.00 0.00 0.00 2.73
368 369 5.662211 TGTCGCCTTAAAAAGAACAGTAC 57.338 39.130 0.00 0.00 0.00 2.73
373 374 5.358298 AGACATGTCGCCTTAAAAAGAAC 57.642 39.130 19.85 0.00 34.09 3.01
376 377 6.664515 TGTTAAGACATGTCGCCTTAAAAAG 58.335 36.000 19.85 0.00 35.11 2.27
393 394 5.123186 CCTAATGCAACGGTTCATGTTAAGA 59.877 40.000 0.00 0.00 0.00 2.10
405 406 2.386661 ACTGACTCCTAATGCAACGG 57.613 50.000 0.00 0.00 0.00 4.44
464 466 7.676893 TGTAAAACTGACTTCTATTAGAGGGGA 59.323 37.037 7.63 0.00 0.00 4.81
787 789 0.327924 TCTCCCACATGATGCCGTTT 59.672 50.000 0.00 0.00 0.00 3.60
788 790 0.392998 GTCTCCCACATGATGCCGTT 60.393 55.000 0.00 0.00 0.00 4.44
789 791 1.221840 GTCTCCCACATGATGCCGT 59.778 57.895 0.00 0.00 0.00 5.68
790 792 0.812811 CTGTCTCCCACATGATGCCG 60.813 60.000 0.00 0.00 33.23 5.69
791 793 0.254178 ACTGTCTCCCACATGATGCC 59.746 55.000 0.00 0.00 33.23 4.40
792 794 2.831333 CTACTGTCTCCCACATGATGC 58.169 52.381 0.00 0.00 33.23 3.91
843 845 0.660488 GCGTTGGTTCACATCACACA 59.340 50.000 0.00 0.00 0.00 3.72
866 868 5.368230 GGGAGGAGAGGGGATATAATGATTC 59.632 48.000 0.00 0.00 0.00 2.52
895 897 6.328672 AGTGGGAGCTATATGACTTTGAAGAT 59.671 38.462 0.00 0.00 0.00 2.40
908 910 7.512746 AGATGTGGTTAATTAGTGGGAGCTATA 59.487 37.037 0.00 0.00 0.00 1.31
909 911 5.968676 TGTGGTTAATTAGTGGGAGCTAT 57.031 39.130 0.00 0.00 0.00 2.97
910 912 5.665812 AGATGTGGTTAATTAGTGGGAGCTA 59.334 40.000 0.00 0.00 0.00 3.32
911 913 4.475016 AGATGTGGTTAATTAGTGGGAGCT 59.525 41.667 0.00 0.00 0.00 4.09
912 914 4.781934 AGATGTGGTTAATTAGTGGGAGC 58.218 43.478 0.00 0.00 0.00 4.70
913 915 6.540189 CAGAAGATGTGGTTAATTAGTGGGAG 59.460 42.308 0.00 0.00 0.00 4.30
933 939 1.789464 GTGAGAGCGTGAACACAGAAG 59.211 52.381 5.80 0.00 34.05 2.85
934 940 1.409064 AGTGAGAGCGTGAACACAGAA 59.591 47.619 5.80 0.00 35.97 3.02
955 961 4.051237 GGTTGTTTTTCAGGATGTGAAGC 58.949 43.478 0.00 0.00 46.09 3.86
1012 1021 0.320683 TAGATCGGCATTGCGGGATG 60.321 55.000 15.78 0.00 0.00 3.51
1030 1039 1.152984 CCACCTTGATGGCCGCATA 60.153 57.895 0.00 0.00 40.22 3.14
1120 1129 1.134007 CCTGAAGATGGCCATGCAGTA 60.134 52.381 26.56 4.50 0.00 2.74
1239 1248 4.563337 ACAATCGAGATGCAAATCCATG 57.437 40.909 0.00 0.00 0.00 3.66
1292 2431 6.478588 CGAGGAGGAAACGAATCAAATTTAG 58.521 40.000 0.00 0.00 0.00 1.85
1319 2458 4.881273 ACACACATGAAAACTAACTGCTCA 59.119 37.500 0.00 0.00 0.00 4.26
1408 2547 0.175073 ACGGAAGAGGCACGAATACC 59.825 55.000 0.00 0.00 0.00 2.73
1426 2565 6.376581 TCCTTACAGTTGTACCTTCTAGCTAC 59.623 42.308 0.00 0.00 0.00 3.58
1441 2580 3.698289 TCCTCTCGACATCCTTACAGTT 58.302 45.455 0.00 0.00 0.00 3.16
1442 2581 3.367646 TCCTCTCGACATCCTTACAGT 57.632 47.619 0.00 0.00 0.00 3.55
1444 2583 4.537751 AGAATCCTCTCGACATCCTTACA 58.462 43.478 0.00 0.00 0.00 2.41
1445 2584 5.523438 AAGAATCCTCTCGACATCCTTAC 57.477 43.478 0.00 0.00 0.00 2.34
1446 2585 6.546428 AAAAGAATCCTCTCGACATCCTTA 57.454 37.500 0.00 0.00 0.00 2.69
1455 2594 5.862924 TGTAAGCAAAAAGAATCCTCTCG 57.137 39.130 0.00 0.00 0.00 4.04
1493 2635 4.536065 TGCACAAGTCTGAAAAATAAGCG 58.464 39.130 0.00 0.00 0.00 4.68
1501 2643 6.237901 ACATTACCTATGCACAAGTCTGAAA 58.762 36.000 0.00 0.00 37.81 2.69
1513 2655 4.947388 TCAAGGTCCAAACATTACCTATGC 59.053 41.667 0.00 0.00 42.86 3.14
1518 2660 4.007659 ACGATCAAGGTCCAAACATTACC 58.992 43.478 0.00 0.00 0.00 2.85
1521 2663 3.305335 GCAACGATCAAGGTCCAAACATT 60.305 43.478 0.00 0.00 0.00 2.71
1526 2668 2.270352 AAGCAACGATCAAGGTCCAA 57.730 45.000 0.00 0.00 0.00 3.53
1536 2678 6.863126 CAGGTTTTCAAAGATAAAGCAACGAT 59.137 34.615 0.00 0.00 34.96 3.73
1569 2711 3.317993 CCCAAACTGAAACAAAGGATCGT 59.682 43.478 0.00 0.00 0.00 3.73
1570 2712 3.568007 TCCCAAACTGAAACAAAGGATCG 59.432 43.478 0.00 0.00 0.00 3.69
1574 2716 5.535753 AATCTCCCAAACTGAAACAAAGG 57.464 39.130 0.00 0.00 0.00 3.11
1604 2746 0.532115 AAATCCCAAACTGCATCCGC 59.468 50.000 0.00 0.00 39.24 5.54
1605 2747 4.499696 GGATAAAATCCCAAACTGCATCCG 60.500 45.833 0.00 0.00 43.88 4.18
1606 2748 4.948847 GGATAAAATCCCAAACTGCATCC 58.051 43.478 0.00 0.00 43.88 3.51
1673 2815 8.475639 TGGGTGTAAATTACAGTTTTGCTAAAA 58.524 29.630 6.03 0.00 39.77 1.52
1674 2816 7.921745 GTGGGTGTAAATTACAGTTTTGCTAAA 59.078 33.333 6.03 0.00 39.77 1.85
1675 2817 7.068348 TGTGGGTGTAAATTACAGTTTTGCTAA 59.932 33.333 6.03 0.00 39.77 3.09
1676 2818 6.546403 TGTGGGTGTAAATTACAGTTTTGCTA 59.454 34.615 6.03 0.00 39.77 3.49
1677 2819 5.361285 TGTGGGTGTAAATTACAGTTTTGCT 59.639 36.000 6.03 0.00 39.77 3.91
1678 2820 5.593010 TGTGGGTGTAAATTACAGTTTTGC 58.407 37.500 6.03 0.00 39.77 3.68
1679 2821 7.923344 TCATTGTGGGTGTAAATTACAGTTTTG 59.077 33.333 6.03 0.00 39.77 2.44
1680 2822 8.012957 TCATTGTGGGTGTAAATTACAGTTTT 57.987 30.769 6.03 0.00 39.77 2.43
1683 2825 7.232534 ACATTCATTGTGGGTGTAAATTACAGT 59.767 33.333 6.03 0.00 36.88 3.55
1684 2826 7.601856 ACATTCATTGTGGGTGTAAATTACAG 58.398 34.615 6.03 0.00 36.88 2.74
1685 2827 7.231519 TGACATTCATTGTGGGTGTAAATTACA 59.768 33.333 1.08 1.08 39.18 2.41
1686 2828 7.598278 TGACATTCATTGTGGGTGTAAATTAC 58.402 34.615 0.00 0.00 39.18 1.89
1752 2894 2.097825 GTTCCTCTACAGCTTACCCGA 58.902 52.381 0.00 0.00 0.00 5.14
1757 2899 6.893554 TGGTTATACAGTTCCTCTACAGCTTA 59.106 38.462 0.00 0.00 0.00 3.09
1758 2900 5.720041 TGGTTATACAGTTCCTCTACAGCTT 59.280 40.000 0.00 0.00 0.00 3.74
1797 3015 2.087646 GATTTCACTTCTGTCCCAGCC 58.912 52.381 0.00 0.00 0.00 4.85
1809 3027 5.640147 TCCACCCATTTAGTTGATTTCACT 58.360 37.500 0.00 0.00 0.00 3.41
1810 3028 5.710099 TCTCCACCCATTTAGTTGATTTCAC 59.290 40.000 0.00 0.00 0.00 3.18
1811 3029 5.886609 TCTCCACCCATTTAGTTGATTTCA 58.113 37.500 0.00 0.00 0.00 2.69
1818 3036 5.319043 TGAGTTTCTCCACCCATTTAGTT 57.681 39.130 0.00 0.00 0.00 2.24
1821 3039 4.105697 AGGTTGAGTTTCTCCACCCATTTA 59.894 41.667 13.85 0.00 44.39 1.40
1824 3042 2.065799 AGGTTGAGTTTCTCCACCCAT 58.934 47.619 13.85 0.00 44.39 4.00
1827 3045 4.553330 TGATAGGTTGAGTTTCTCCACC 57.447 45.455 10.72 10.72 43.87 4.61
1891 3111 7.024340 ACATACAAACTGATGCAGATGATTC 57.976 36.000 0.82 0.00 35.18 2.52
1957 3179 2.955614 ACAAATTGCAGAGCAGATTGC 58.044 42.857 14.58 0.00 45.46 3.56
1962 3184 3.004002 TGACAGAACAAATTGCAGAGCAG 59.996 43.478 0.00 0.00 40.61 4.24
1989 3212 8.994429 AATATCTGAGGCGAACAATAATAGAG 57.006 34.615 0.00 0.00 0.00 2.43
2002 3225 4.878397 AGAGGAAACAAAATATCTGAGGCG 59.122 41.667 0.00 0.00 0.00 5.52
2010 3233 8.526147 CACCTGAATGAAGAGGAAACAAAATAT 58.474 33.333 0.00 0.00 33.16 1.28
2183 3408 2.519063 TGTTGTGGCTGCACCTGG 60.519 61.111 0.50 0.00 40.22 4.45
2188 3413 0.533531 CTGTCTCTGTTGTGGCTGCA 60.534 55.000 0.50 0.00 0.00 4.41
2191 3416 2.899900 TGATACTGTCTCTGTTGTGGCT 59.100 45.455 0.00 0.00 0.00 4.75
2204 3429 4.530857 GCCGGCGCCTGATACTGT 62.531 66.667 26.68 0.00 0.00 3.55
2230 3464 0.529337 CGCCTGATACTGCCTCTGTG 60.529 60.000 0.00 0.00 0.00 3.66
2231 3465 1.819229 CGCCTGATACTGCCTCTGT 59.181 57.895 0.00 0.00 0.00 3.41
2339 3573 1.429423 GTATTGCTTCTGCGGTGGC 59.571 57.895 0.00 0.00 43.34 5.01
2950 4235 1.704628 ACTGTCATGTGGGAATGTGGA 59.295 47.619 0.00 0.00 0.00 4.02
2993 4278 7.921786 ATCGTCAAGTCATGAAGGAAAAATA 57.078 32.000 0.00 0.00 40.50 1.40
3163 4705 6.569780 ACAGAGTCGCACACACAATATATAA 58.430 36.000 0.00 0.00 0.00 0.98
3204 4748 4.024387 GCTCAGTGAAATTGTAACGTGGAA 60.024 41.667 0.00 0.00 0.00 3.53
3205 4749 3.496884 GCTCAGTGAAATTGTAACGTGGA 59.503 43.478 0.00 0.00 0.00 4.02
3206 4750 3.498397 AGCTCAGTGAAATTGTAACGTGG 59.502 43.478 0.00 0.00 0.00 4.94
3207 4751 4.211164 TCAGCTCAGTGAAATTGTAACGTG 59.789 41.667 0.00 0.00 0.00 4.49
3208 4752 4.377021 TCAGCTCAGTGAAATTGTAACGT 58.623 39.130 0.00 0.00 0.00 3.99
3209 4753 4.990543 TCAGCTCAGTGAAATTGTAACG 57.009 40.909 0.00 0.00 0.00 3.18
3210 4754 7.334421 TCCTAATCAGCTCAGTGAAATTGTAAC 59.666 37.037 0.00 0.00 0.00 2.50
3211 4755 7.334421 GTCCTAATCAGCTCAGTGAAATTGTAA 59.666 37.037 0.00 0.00 0.00 2.41
3212 4756 6.818644 GTCCTAATCAGCTCAGTGAAATTGTA 59.181 38.462 0.00 0.00 0.00 2.41
3213 4757 5.645497 GTCCTAATCAGCTCAGTGAAATTGT 59.355 40.000 0.00 0.00 0.00 2.71
3214 4758 5.879223 AGTCCTAATCAGCTCAGTGAAATTG 59.121 40.000 0.00 0.00 0.00 2.32
3232 4776 8.927675 TTTCAGGTTGCTAAATTAAAGTCCTA 57.072 30.769 0.00 0.00 0.00 2.94
3252 4796 7.010738 GCCACATCAAACCATTCATAATTTCAG 59.989 37.037 0.00 0.00 0.00 3.02
3297 4841 0.098376 GCGACTACACCGTGGACTAG 59.902 60.000 3.03 0.00 0.00 2.57
3304 4848 1.177256 AGAGGTTGCGACTACACCGT 61.177 55.000 3.59 0.00 0.00 4.83
3305 4849 0.038526 AAGAGGTTGCGACTACACCG 60.039 55.000 3.59 0.00 0.00 4.94
3306 4850 1.429463 CAAGAGGTTGCGACTACACC 58.571 55.000 3.59 0.00 0.00 4.16
3316 4860 2.609459 GTGATGGATACGCAAGAGGTTG 59.391 50.000 0.00 0.00 43.62 3.77
3317 4861 2.420129 GGTGATGGATACGCAAGAGGTT 60.420 50.000 0.00 0.00 43.62 3.50
3318 4862 1.139058 GGTGATGGATACGCAAGAGGT 59.861 52.381 0.00 0.00 43.62 3.85
3319 4863 1.869754 CGGTGATGGATACGCAAGAGG 60.870 57.143 0.00 0.00 43.62 3.69
3320 4864 1.491670 CGGTGATGGATACGCAAGAG 58.508 55.000 0.00 0.00 43.62 2.85
3321 4865 3.659850 CGGTGATGGATACGCAAGA 57.340 52.632 0.00 0.00 43.62 3.02
3326 4870 0.104120 TGAAGGCGGTGATGGATACG 59.896 55.000 0.00 0.00 42.51 3.06
3327 4871 1.583054 GTGAAGGCGGTGATGGATAC 58.417 55.000 0.00 0.00 0.00 2.24
3328 4872 0.468226 GGTGAAGGCGGTGATGGATA 59.532 55.000 0.00 0.00 0.00 2.59
3329 4873 1.224592 GGTGAAGGCGGTGATGGAT 59.775 57.895 0.00 0.00 0.00 3.41
3330 4874 1.561769 ATGGTGAAGGCGGTGATGGA 61.562 55.000 0.00 0.00 0.00 3.41
3331 4875 1.077501 ATGGTGAAGGCGGTGATGG 60.078 57.895 0.00 0.00 0.00 3.51
3332 4876 0.392863 TGATGGTGAAGGCGGTGATG 60.393 55.000 0.00 0.00 0.00 3.07
3333 4877 0.548031 ATGATGGTGAAGGCGGTGAT 59.452 50.000 0.00 0.00 0.00 3.06
3334 4878 0.327924 AATGATGGTGAAGGCGGTGA 59.672 50.000 0.00 0.00 0.00 4.02
3335 4879 0.452987 CAATGATGGTGAAGGCGGTG 59.547 55.000 0.00 0.00 0.00 4.94
3336 4880 0.038166 ACAATGATGGTGAAGGCGGT 59.962 50.000 0.00 0.00 0.00 5.68
3337 4881 0.734889 GACAATGATGGTGAAGGCGG 59.265 55.000 0.00 0.00 0.00 6.13
3338 4882 0.374758 CGACAATGATGGTGAAGGCG 59.625 55.000 0.00 0.00 0.00 5.52
3339 4883 1.131126 CACGACAATGATGGTGAAGGC 59.869 52.381 0.00 0.00 32.23 4.35
3340 4884 2.698803 TCACGACAATGATGGTGAAGG 58.301 47.619 0.00 0.00 36.55 3.46
3343 4887 3.673902 ACATTCACGACAATGATGGTGA 58.326 40.909 15.12 0.00 37.24 4.02
3344 4888 3.484065 CGACATTCACGACAATGATGGTG 60.484 47.826 15.12 0.00 37.24 4.17
3345 4889 2.672874 CGACATTCACGACAATGATGGT 59.327 45.455 15.12 0.00 37.24 3.55
3346 4890 2.672874 ACGACATTCACGACAATGATGG 59.327 45.455 15.12 7.95 37.24 3.51
3347 4891 3.367630 TGACGACATTCACGACAATGATG 59.632 43.478 15.12 10.12 37.24 3.07
3348 4892 3.367932 GTGACGACATTCACGACAATGAT 59.632 43.478 15.12 3.28 36.79 2.45
3349 4893 2.729360 GTGACGACATTCACGACAATGA 59.271 45.455 15.12 0.00 36.79 2.57
3350 4894 3.090312 GTGACGACATTCACGACAATG 57.910 47.619 8.84 8.84 36.79 2.82
3357 4901 0.506932 CGGTGTGTGACGACATTCAC 59.493 55.000 13.38 13.38 45.34 3.18
3358 4902 0.598942 CCGGTGTGTGACGACATTCA 60.599 55.000 0.00 0.00 33.63 2.57
3359 4903 0.319211 TCCGGTGTGTGACGACATTC 60.319 55.000 0.00 0.00 33.63 2.67
3360 4904 0.320374 ATCCGGTGTGTGACGACATT 59.680 50.000 0.00 0.00 33.63 2.71
3361 4905 0.108804 GATCCGGTGTGTGACGACAT 60.109 55.000 0.00 0.00 33.63 3.06
3362 4906 1.287815 GATCCGGTGTGTGACGACA 59.712 57.895 0.00 0.00 0.00 4.35
3363 4907 0.108804 ATGATCCGGTGTGTGACGAC 60.109 55.000 0.00 0.00 0.00 4.34
3364 4908 0.172578 GATGATCCGGTGTGTGACGA 59.827 55.000 0.00 0.00 0.00 4.20
3365 4909 1.139816 CGATGATCCGGTGTGTGACG 61.140 60.000 0.00 0.00 0.00 4.35
3366 4910 1.421410 GCGATGATCCGGTGTGTGAC 61.421 60.000 0.00 0.00 0.00 3.67
3367 4911 1.153647 GCGATGATCCGGTGTGTGA 60.154 57.895 0.00 0.00 0.00 3.58
3368 4912 1.153568 AGCGATGATCCGGTGTGTG 60.154 57.895 0.00 0.00 38.94 3.82
3369 4913 3.298958 AGCGATGATCCGGTGTGT 58.701 55.556 0.00 0.00 38.94 3.72
3373 4917 0.250038 CCAATCAGCGATGATCCGGT 60.250 55.000 17.74 0.00 41.25 5.28
3374 4918 0.033920 TCCAATCAGCGATGATCCGG 59.966 55.000 17.74 19.41 0.00 5.14
3375 4919 1.426423 CTCCAATCAGCGATGATCCG 58.574 55.000 17.74 11.08 0.00 4.18
3376 4920 1.071385 ACCTCCAATCAGCGATGATCC 59.929 52.381 17.74 0.00 0.00 3.36
3377 4921 2.036992 AGACCTCCAATCAGCGATGATC 59.963 50.000 17.74 3.16 0.00 2.92
3378 4922 2.036992 GAGACCTCCAATCAGCGATGAT 59.963 50.000 11.05 11.05 0.00 2.45
3379 4923 1.410517 GAGACCTCCAATCAGCGATGA 59.589 52.381 5.53 5.53 0.00 2.92
3380 4924 1.137675 TGAGACCTCCAATCAGCGATG 59.862 52.381 0.00 0.00 0.00 3.84
3381 4925 1.489481 TGAGACCTCCAATCAGCGAT 58.511 50.000 0.00 0.00 0.00 4.58
3382 4926 1.489481 ATGAGACCTCCAATCAGCGA 58.511 50.000 0.00 0.00 0.00 4.93
3383 4927 2.363680 AGTATGAGACCTCCAATCAGCG 59.636 50.000 0.00 0.00 0.00 5.18
3384 4928 3.244044 GGAGTATGAGACCTCCAATCAGC 60.244 52.174 0.00 0.00 36.11 4.26
3385 4929 4.222336 AGGAGTATGAGACCTCCAATCAG 58.778 47.826 8.30 0.00 38.39 2.90
3386 4930 4.219115 GAGGAGTATGAGACCTCCAATCA 58.781 47.826 8.30 0.00 42.84 2.57
3387 4931 4.864704 GAGGAGTATGAGACCTCCAATC 57.135 50.000 8.30 0.00 42.84 2.67
3392 4936 4.479158 AGATTGGAGGAGTATGAGACCTC 58.521 47.826 0.00 0.00 46.44 3.85
3393 4937 4.479158 GAGATTGGAGGAGTATGAGACCT 58.521 47.826 0.00 0.00 36.68 3.85
3394 4938 3.576550 GGAGATTGGAGGAGTATGAGACC 59.423 52.174 0.00 0.00 0.00 3.85
3395 4939 3.254657 CGGAGATTGGAGGAGTATGAGAC 59.745 52.174 0.00 0.00 0.00 3.36
3396 4940 3.138468 TCGGAGATTGGAGGAGTATGAGA 59.862 47.826 0.00 0.00 0.00 3.27
3397 4941 3.491342 TCGGAGATTGGAGGAGTATGAG 58.509 50.000 0.00 0.00 0.00 2.90
3398 4942 3.595190 TCGGAGATTGGAGGAGTATGA 57.405 47.619 0.00 0.00 0.00 2.15
3399 4943 3.616076 GCATCGGAGATTGGAGGAGTATG 60.616 52.174 0.00 0.00 45.12 2.39
3400 4944 2.564947 GCATCGGAGATTGGAGGAGTAT 59.435 50.000 0.00 0.00 45.12 2.12
3401 4945 1.964223 GCATCGGAGATTGGAGGAGTA 59.036 52.381 0.00 0.00 45.12 2.59
3402 4946 0.755686 GCATCGGAGATTGGAGGAGT 59.244 55.000 0.00 0.00 45.12 3.85
3403 4947 0.755079 TGCATCGGAGATTGGAGGAG 59.245 55.000 0.00 0.00 45.12 3.69
3404 4948 0.465705 GTGCATCGGAGATTGGAGGA 59.534 55.000 0.00 0.00 45.12 3.71
3405 4949 0.877649 CGTGCATCGGAGATTGGAGG 60.878 60.000 0.00 0.00 45.12 4.30
3406 4950 1.493950 GCGTGCATCGGAGATTGGAG 61.494 60.000 10.02 0.00 45.12 3.86
3407 4951 1.521457 GCGTGCATCGGAGATTGGA 60.521 57.895 10.02 0.00 45.12 3.53
3408 4952 2.874694 CGCGTGCATCGGAGATTGG 61.875 63.158 0.00 0.00 45.12 3.16
3409 4953 2.167219 ACGCGTGCATCGGAGATTG 61.167 57.895 12.93 0.00 45.12 2.67
3410 4954 2.167219 CACGCGTGCATCGGAGATT 61.167 57.895 28.16 0.00 45.12 2.40
3411 4955 2.583319 CACGCGTGCATCGGAGAT 60.583 61.111 28.16 0.00 45.12 2.75
3433 4977 3.686241 TCCGGTATGTATAAGATCGACCG 59.314 47.826 0.00 3.63 46.07 4.79
3434 4978 4.940046 TCTCCGGTATGTATAAGATCGACC 59.060 45.833 0.00 0.00 0.00 4.79
3435 4979 5.873712 TCTCTCCGGTATGTATAAGATCGAC 59.126 44.000 0.00 0.00 0.00 4.20
3436 4980 6.046290 TCTCTCCGGTATGTATAAGATCGA 57.954 41.667 0.00 0.00 0.00 3.59
3437 4981 6.238511 CCATCTCTCCGGTATGTATAAGATCG 60.239 46.154 0.00 0.00 0.00 3.69
3438 4982 6.603997 ACCATCTCTCCGGTATGTATAAGATC 59.396 42.308 0.00 0.00 32.31 2.75
3439 4983 6.494952 ACCATCTCTCCGGTATGTATAAGAT 58.505 40.000 0.00 0.00 32.31 2.40
3440 4984 5.888901 ACCATCTCTCCGGTATGTATAAGA 58.111 41.667 0.00 0.00 32.31 2.10
3441 4985 6.390721 CAACCATCTCTCCGGTATGTATAAG 58.609 44.000 0.00 0.00 33.17 1.73
3442 4986 5.279306 GCAACCATCTCTCCGGTATGTATAA 60.279 44.000 0.00 0.00 33.17 0.98
3443 4987 4.219944 GCAACCATCTCTCCGGTATGTATA 59.780 45.833 0.00 0.00 33.17 1.47
3444 4988 3.006967 GCAACCATCTCTCCGGTATGTAT 59.993 47.826 0.00 0.00 33.17 2.29
3445 4989 2.364324 GCAACCATCTCTCCGGTATGTA 59.636 50.000 0.00 0.00 33.17 2.29
3446 4990 1.139058 GCAACCATCTCTCCGGTATGT 59.861 52.381 0.00 0.00 33.17 2.29
3447 4991 1.414181 AGCAACCATCTCTCCGGTATG 59.586 52.381 0.00 1.60 33.17 2.39
3448 4992 1.689273 GAGCAACCATCTCTCCGGTAT 59.311 52.381 0.00 0.00 33.17 2.73
3449 4993 1.112113 GAGCAACCATCTCTCCGGTA 58.888 55.000 0.00 0.00 33.17 4.02
3450 4994 1.901085 GAGCAACCATCTCTCCGGT 59.099 57.895 0.00 0.00 36.98 5.28
3451 4995 1.227089 CGAGCAACCATCTCTCCGG 60.227 63.158 0.00 0.00 0.00 5.14
3452 4996 0.248825 CTCGAGCAACCATCTCTCCG 60.249 60.000 0.00 0.00 0.00 4.63
3453 4997 1.107114 TCTCGAGCAACCATCTCTCC 58.893 55.000 7.81 0.00 0.00 3.71
3454 4998 2.949451 TTCTCGAGCAACCATCTCTC 57.051 50.000 7.81 0.00 0.00 3.20
3455 4999 3.030291 AGATTCTCGAGCAACCATCTCT 58.970 45.455 7.81 0.00 0.00 3.10
3456 5000 3.451141 AGATTCTCGAGCAACCATCTC 57.549 47.619 7.81 0.00 0.00 2.75
3457 5001 3.068873 GGTAGATTCTCGAGCAACCATCT 59.931 47.826 7.81 10.95 0.00 2.90
3458 5002 3.181475 TGGTAGATTCTCGAGCAACCATC 60.181 47.826 7.81 4.16 30.84 3.51
3459 5003 2.766263 TGGTAGATTCTCGAGCAACCAT 59.234 45.455 7.81 0.00 30.84 3.55
3460 5004 2.176045 TGGTAGATTCTCGAGCAACCA 58.824 47.619 7.81 12.90 33.30 3.67
3461 5005 2.961526 TGGTAGATTCTCGAGCAACC 57.038 50.000 7.81 10.52 0.00 3.77
3462 5006 4.433615 TCAATGGTAGATTCTCGAGCAAC 58.566 43.478 7.81 0.00 33.55 4.17
3463 5007 4.736126 TCAATGGTAGATTCTCGAGCAA 57.264 40.909 7.81 3.61 33.55 3.91
3464 5008 4.736126 TTCAATGGTAGATTCTCGAGCA 57.264 40.909 7.81 0.00 34.28 4.26
3465 5009 5.178438 GGAATTCAATGGTAGATTCTCGAGC 59.822 44.000 7.81 0.00 0.00 5.03
3466 5010 6.520272 AGGAATTCAATGGTAGATTCTCGAG 58.480 40.000 5.93 5.93 0.00 4.04
3467 5011 6.485830 AGGAATTCAATGGTAGATTCTCGA 57.514 37.500 7.93 0.00 0.00 4.04
3468 5012 7.875041 ACATAGGAATTCAATGGTAGATTCTCG 59.125 37.037 18.80 0.00 0.00 4.04
3469 5013 9.213799 GACATAGGAATTCAATGGTAGATTCTC 57.786 37.037 18.80 6.28 0.00 2.87
3470 5014 8.717717 TGACATAGGAATTCAATGGTAGATTCT 58.282 33.333 18.80 0.00 0.00 2.40
3471 5015 8.908786 TGACATAGGAATTCAATGGTAGATTC 57.091 34.615 18.80 10.09 0.00 2.52
3472 5016 9.872684 AATGACATAGGAATTCAATGGTAGATT 57.127 29.630 18.80 10.79 0.00 2.40
3474 5018 9.778741 GTAATGACATAGGAATTCAATGGTAGA 57.221 33.333 18.80 5.54 0.00 2.59
3475 5019 9.784531 AGTAATGACATAGGAATTCAATGGTAG 57.215 33.333 18.80 2.32 0.00 3.18
3476 5020 9.778741 GAGTAATGACATAGGAATTCAATGGTA 57.221 33.333 18.80 10.75 0.00 3.25
3477 5021 7.721399 GGAGTAATGACATAGGAATTCAATGGT 59.279 37.037 18.80 7.96 0.00 3.55
3478 5022 7.941238 AGGAGTAATGACATAGGAATTCAATGG 59.059 37.037 18.80 5.31 0.00 3.16
3479 5023 8.915057 AGGAGTAATGACATAGGAATTCAATG 57.085 34.615 7.93 12.29 0.00 2.82
3480 5024 9.927081 AAAGGAGTAATGACATAGGAATTCAAT 57.073 29.630 7.93 0.00 0.00 2.57
3486 5030 8.594550 GGCTATAAAGGAGTAATGACATAGGAA 58.405 37.037 0.00 0.00 0.00 3.36
3487 5031 7.093902 CGGCTATAAAGGAGTAATGACATAGGA 60.094 40.741 0.00 0.00 0.00 2.94
3488 5032 7.036220 CGGCTATAAAGGAGTAATGACATAGG 58.964 42.308 0.00 0.00 0.00 2.57
3489 5033 6.531948 GCGGCTATAAAGGAGTAATGACATAG 59.468 42.308 0.00 0.00 0.00 2.23
3490 5034 6.395629 GCGGCTATAAAGGAGTAATGACATA 58.604 40.000 0.00 0.00 0.00 2.29
3491 5035 5.238583 GCGGCTATAAAGGAGTAATGACAT 58.761 41.667 0.00 0.00 0.00 3.06
3492 5036 4.628074 GCGGCTATAAAGGAGTAATGACA 58.372 43.478 0.00 0.00 0.00 3.58
3493 5037 3.673809 CGCGGCTATAAAGGAGTAATGAC 59.326 47.826 0.00 0.00 0.00 3.06
3494 5038 3.859627 GCGCGGCTATAAAGGAGTAATGA 60.860 47.826 8.83 0.00 0.00 2.57
3495 5039 2.412089 GCGCGGCTATAAAGGAGTAATG 59.588 50.000 8.83 0.00 0.00 1.90
3496 5040 2.612221 GGCGCGGCTATAAAGGAGTAAT 60.612 50.000 27.05 0.00 0.00 1.89
3497 5041 1.269936 GGCGCGGCTATAAAGGAGTAA 60.270 52.381 27.05 0.00 0.00 2.24
3498 5042 0.316204 GGCGCGGCTATAAAGGAGTA 59.684 55.000 27.05 0.00 0.00 2.59
3499 5043 1.069258 GGCGCGGCTATAAAGGAGT 59.931 57.895 27.05 0.00 0.00 3.85
3500 5044 2.022129 CGGCGCGGCTATAAAGGAG 61.022 63.158 30.60 7.59 0.00 3.69
3501 5045 2.028484 CGGCGCGGCTATAAAGGA 59.972 61.111 30.60 0.00 0.00 3.36
3502 5046 3.041940 CCGGCGCGGCTATAAAGG 61.042 66.667 30.60 18.82 41.17 3.11
3541 5085 4.767255 GCGAGAGGCAGTGGGTGG 62.767 72.222 0.00 0.00 42.87 4.61
3570 5114 3.521529 GATGTCCATCGAGGGCCGG 62.522 68.421 12.24 0.00 43.21 6.13
3571 5115 2.029666 GATGTCCATCGAGGGCCG 59.970 66.667 12.24 0.00 43.21 6.13
3572 5116 1.369321 GAGATGTCCATCGAGGGCC 59.631 63.158 12.24 0.00 43.21 5.80
3573 5117 1.369321 GGAGATGTCCATCGAGGGC 59.631 63.158 12.24 7.43 43.31 5.19
3574 5118 1.476007 GGGGAGATGTCCATCGAGGG 61.476 65.000 10.57 10.57 46.07 4.30
3575 5119 1.476007 GGGGGAGATGTCCATCGAGG 61.476 65.000 11.62 0.00 46.07 4.63
3576 5120 2.053618 GGGGGAGATGTCCATCGAG 58.946 63.158 11.62 0.00 46.07 4.04
3577 5121 4.295407 GGGGGAGATGTCCATCGA 57.705 61.111 11.62 0.00 46.07 3.59
3618 5162 4.112341 CTTGAGGCAAGCCAGCGC 62.112 66.667 14.40 0.00 34.63 5.92
3619 5163 2.359107 TCTTGAGGCAAGCCAGCG 60.359 61.111 14.40 0.00 40.84 5.18
3620 5164 2.338785 GGTCTTGAGGCAAGCCAGC 61.339 63.158 14.40 5.47 40.84 4.85
3621 5165 1.676967 GGGTCTTGAGGCAAGCCAG 60.677 63.158 14.40 2.10 40.84 4.85
3622 5166 2.129555 GAGGGTCTTGAGGCAAGCCA 62.130 60.000 14.40 0.00 40.84 4.75
3623 5167 1.377856 GAGGGTCTTGAGGCAAGCC 60.378 63.158 2.02 2.02 40.84 4.35
3624 5168 1.377856 GGAGGGTCTTGAGGCAAGC 60.378 63.158 2.40 0.00 40.84 4.01
3625 5169 0.251634 GAGGAGGGTCTTGAGGCAAG 59.748 60.000 0.84 0.84 42.25 4.01
3626 5170 1.201429 GGAGGAGGGTCTTGAGGCAA 61.201 60.000 0.00 0.00 0.00 4.52
3627 5171 1.613630 GGAGGAGGGTCTTGAGGCA 60.614 63.158 0.00 0.00 0.00 4.75
3628 5172 1.613630 TGGAGGAGGGTCTTGAGGC 60.614 63.158 0.00 0.00 0.00 4.70
3629 5173 0.252467 AGTGGAGGAGGGTCTTGAGG 60.252 60.000 0.00 0.00 0.00 3.86
3630 5174 0.901124 CAGTGGAGGAGGGTCTTGAG 59.099 60.000 0.00 0.00 0.00 3.02
3631 5175 0.545309 CCAGTGGAGGAGGGTCTTGA 60.545 60.000 1.68 0.00 0.00 3.02
3632 5176 0.545309 TCCAGTGGAGGAGGGTCTTG 60.545 60.000 8.12 0.00 32.77 3.02
3633 5177 0.419459 ATCCAGTGGAGGAGGGTCTT 59.581 55.000 18.69 0.00 41.90 3.01
3634 5178 0.031616 GATCCAGTGGAGGAGGGTCT 60.032 60.000 18.69 0.00 41.90 3.85
3635 5179 0.031616 AGATCCAGTGGAGGAGGGTC 60.032 60.000 18.69 9.01 41.90 4.46
3636 5180 1.219213 CTAGATCCAGTGGAGGAGGGT 59.781 57.143 18.69 0.00 41.90 4.34
3637 5181 2.008242 CTAGATCCAGTGGAGGAGGG 57.992 60.000 18.69 3.01 41.90 4.30
3638 5182 1.133199 AGCTAGATCCAGTGGAGGAGG 60.133 57.143 18.69 9.03 41.90 4.30
3639 5183 2.238521 GAGCTAGATCCAGTGGAGGAG 58.761 57.143 18.69 14.57 41.90 3.69
3640 5184 1.133325 GGAGCTAGATCCAGTGGAGGA 60.133 57.143 22.23 4.18 43.01 3.71
3641 5185 1.337118 GGAGCTAGATCCAGTGGAGG 58.663 60.000 22.23 8.69 39.34 4.30
3642 5186 0.958091 CGGAGCTAGATCCAGTGGAG 59.042 60.000 25.98 5.43 39.53 3.86
3643 5187 0.259065 ACGGAGCTAGATCCAGTGGA 59.741 55.000 25.98 15.88 39.53 4.02
3644 5188 0.387202 CACGGAGCTAGATCCAGTGG 59.613 60.000 28.81 17.03 39.53 4.00
3645 5189 0.387202 CCACGGAGCTAGATCCAGTG 59.613 60.000 29.20 29.20 39.53 3.66
3646 5190 1.395826 GCCACGGAGCTAGATCCAGT 61.396 60.000 25.98 20.30 39.53 4.00
3647 5191 1.365633 GCCACGGAGCTAGATCCAG 59.634 63.158 25.98 19.69 39.53 3.86
3648 5192 0.760567 ATGCCACGGAGCTAGATCCA 60.761 55.000 25.98 7.15 39.53 3.41
3649 5193 0.037790 GATGCCACGGAGCTAGATCC 60.038 60.000 17.43 17.43 35.88 3.36
3650 5194 0.037790 GGATGCCACGGAGCTAGATC 60.038 60.000 0.00 0.00 0.00 2.75
3651 5195 0.470833 AGGATGCCACGGAGCTAGAT 60.471 55.000 0.00 0.00 0.00 1.98
3652 5196 1.075970 AGGATGCCACGGAGCTAGA 60.076 57.895 0.00 0.00 0.00 2.43
3653 5197 1.365633 GAGGATGCCACGGAGCTAG 59.634 63.158 0.00 0.00 0.00 3.42
3654 5198 2.134287 GGAGGATGCCACGGAGCTA 61.134 63.158 0.00 0.00 0.00 3.32
3655 5199 2.589610 TAGGAGGATGCCACGGAGCT 62.590 60.000 0.00 0.00 0.00 4.09
3656 5200 2.134287 TAGGAGGATGCCACGGAGC 61.134 63.158 0.00 0.00 0.00 4.70
3657 5201 1.742768 GTAGGAGGATGCCACGGAG 59.257 63.158 0.00 0.00 0.00 4.63
3658 5202 1.760875 GGTAGGAGGATGCCACGGA 60.761 63.158 0.00 0.00 0.00 4.69
3659 5203 2.822399 GGTAGGAGGATGCCACGG 59.178 66.667 0.00 0.00 0.00 4.94
3660 5204 2.417516 CGGTAGGAGGATGCCACG 59.582 66.667 0.00 0.00 0.00 4.94
3661 5205 2.109181 GCGGTAGGAGGATGCCAC 59.891 66.667 0.00 0.00 0.00 5.01
3662 5206 3.536917 CGCGGTAGGAGGATGCCA 61.537 66.667 0.00 0.00 0.00 4.92
3663 5207 3.224324 TCGCGGTAGGAGGATGCC 61.224 66.667 6.13 0.00 0.00 4.40
3664 5208 2.027751 GTCGCGGTAGGAGGATGC 59.972 66.667 6.13 0.00 0.00 3.91
3665 5209 2.331805 CGTCGCGGTAGGAGGATG 59.668 66.667 6.13 0.00 0.00 3.51
3666 5210 3.593794 GCGTCGCGGTAGGAGGAT 61.594 66.667 6.13 0.00 0.00 3.24
3678 5222 4.821589 GAGGCAAGGAGGGCGTCG 62.822 72.222 0.53 0.00 36.58 5.12
3679 5223 4.475135 GGAGGCAAGGAGGGCGTC 62.475 72.222 0.00 0.00 43.41 5.19
3683 5227 3.415087 CTGGGGAGGCAAGGAGGG 61.415 72.222 0.00 0.00 0.00 4.30
3684 5228 4.120755 GCTGGGGAGGCAAGGAGG 62.121 72.222 0.00 0.00 0.00 4.30
3685 5229 4.120755 GGCTGGGGAGGCAAGGAG 62.121 72.222 0.00 0.00 0.00 3.69
3748 5292 4.368543 AACCTTCGACCGCGGTCC 62.369 66.667 43.58 29.11 41.76 4.46
3749 5293 2.808321 GAACCTTCGACCGCGGTC 60.808 66.667 41.75 41.75 41.40 4.79
3750 5294 3.608662 TGAACCTTCGACCGCGGT 61.609 61.111 34.89 34.89 38.28 5.68
3751 5295 3.110178 GTGAACCTTCGACCGCGG 61.110 66.667 26.86 26.86 38.28 6.46
3752 5296 3.110178 GGTGAACCTTCGACCGCG 61.110 66.667 0.00 0.00 39.35 6.46
3753 5297 3.110178 CGGTGAACCTTCGACCGC 61.110 66.667 12.80 0.00 41.32 5.68
3754 5298 3.110178 GCGGTGAACCTTCGACCG 61.110 66.667 17.55 17.55 45.70 4.79
3755 5299 3.110178 CGCGGTGAACCTTCGACC 61.110 66.667 0.00 0.00 33.53 4.79
3756 5300 2.355481 ACGCGGTGAACCTTCGAC 60.355 61.111 12.47 0.00 34.99 4.20
3757 5301 2.049802 GACGCGGTGAACCTTCGA 60.050 61.111 12.47 0.00 34.99 3.71
3758 5302 3.467119 CGACGCGGTGAACCTTCG 61.467 66.667 12.47 3.74 36.31 3.79
3759 5303 3.774702 GCGACGCGGTGAACCTTC 61.775 66.667 12.47 0.00 0.00 3.46
3779 5323 3.842923 ATGGCTCCTCCGACAGCG 61.843 66.667 0.00 0.00 36.41 5.18
3780 5324 2.202987 CATGGCTCCTCCGACAGC 60.203 66.667 0.00 0.00 37.80 4.40
3781 5325 2.503061 CCATGGCTCCTCCGACAG 59.497 66.667 0.00 0.00 37.80 3.51
3782 5326 3.785859 GCCATGGCTCCTCCGACA 61.786 66.667 29.98 0.00 37.80 4.35
3783 5327 3.746949 CTGCCATGGCTCCTCCGAC 62.747 68.421 35.53 5.76 42.51 4.79
3784 5328 3.473647 CTGCCATGGCTCCTCCGA 61.474 66.667 35.53 14.21 42.51 4.55
3785 5329 4.559063 CCTGCCATGGCTCCTCCG 62.559 72.222 35.53 16.70 42.51 4.63
3862 5406 4.394712 GCCACCGACCAGGGAGTG 62.395 72.222 0.00 0.00 46.96 3.51
3863 5407 4.640690 AGCCACCGACCAGGGAGT 62.641 66.667 0.00 0.00 46.96 3.85
3864 5408 4.087892 CAGCCACCGACCAGGGAG 62.088 72.222 0.00 0.00 46.96 4.30
3887 5431 4.479993 CAGGGAAGAGGCAGCGGG 62.480 72.222 0.00 0.00 0.00 6.13
3888 5432 4.479993 CCAGGGAAGAGGCAGCGG 62.480 72.222 0.00 0.00 0.00 5.52
3894 5438 2.922234 GGATGGCCAGGGAAGAGG 59.078 66.667 13.05 0.00 0.00 3.69
3895 5439 2.507944 CGGATGGCCAGGGAAGAG 59.492 66.667 13.05 0.00 0.00 2.85
3896 5440 3.797353 GCGGATGGCCAGGGAAGA 61.797 66.667 13.05 0.00 34.80 2.87
3897 5441 3.764160 GAGCGGATGGCCAGGGAAG 62.764 68.421 13.05 1.55 45.17 3.46
3898 5442 3.797353 GAGCGGATGGCCAGGGAA 61.797 66.667 13.05 0.00 45.17 3.97
3904 5448 3.757248 ATTCCACGAGCGGATGGCC 62.757 63.158 0.00 0.00 45.17 5.36
3905 5449 2.203070 ATTCCACGAGCGGATGGC 60.203 61.111 0.00 0.00 44.05 4.40
3906 5450 1.153369 ACATTCCACGAGCGGATGG 60.153 57.895 0.00 0.00 34.19 3.51
3907 5451 1.482621 CGACATTCCACGAGCGGATG 61.483 60.000 0.00 0.00 34.19 3.51
3908 5452 1.226974 CGACATTCCACGAGCGGAT 60.227 57.895 0.00 0.00 34.19 4.18
3909 5453 2.180769 CGACATTCCACGAGCGGA 59.819 61.111 0.00 0.00 0.00 5.54
3910 5454 3.554692 GCGACATTCCACGAGCGG 61.555 66.667 0.00 0.00 0.00 5.52
3911 5455 2.283780 CTTGCGACATTCCACGAGCG 62.284 60.000 0.00 0.00 0.00 5.03
3912 5456 1.421485 CTTGCGACATTCCACGAGC 59.579 57.895 0.00 0.00 0.00 5.03
3913 5457 0.389817 TCCTTGCGACATTCCACGAG 60.390 55.000 0.00 0.00 0.00 4.18
3914 5458 0.669318 GTCCTTGCGACATTCCACGA 60.669 55.000 0.00 0.00 41.54 4.35
3915 5459 0.948623 TGTCCTTGCGACATTCCACG 60.949 55.000 0.00 0.00 46.80 4.94
3916 5460 2.927004 TGTCCTTGCGACATTCCAC 58.073 52.632 0.00 0.00 46.80 4.02



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.