Multiple sequence alignment - TraesCS1A01G151400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G151400 chr1A 100.000 4929 0 0 1 4929 259998663 259993735 0.000000e+00 9103.0
1 TraesCS1A01G151400 chr1A 91.954 174 13 1 409 581 571565241 571565414 4.930000e-60 243.0
2 TraesCS1A01G151400 chr1A 88.889 135 14 1 437 571 536871628 536871761 1.100000e-36 165.0
3 TraesCS1A01G151400 chr1D 97.045 2335 49 12 2281 4608 204296798 204294477 0.000000e+00 3912.0
4 TraesCS1A01G151400 chr1D 91.504 1742 71 31 588 2280 204298548 204296835 0.000000e+00 2326.0
5 TraesCS1A01G151400 chr1B 95.386 1929 47 19 2689 4608 299975888 299973993 0.000000e+00 3031.0
6 TraesCS1A01G151400 chr1B 92.021 1717 82 25 588 2280 299978394 299976709 0.000000e+00 2361.0
7 TraesCS1A01G151400 chr1B 93.803 355 13 4 2281 2629 299976672 299976321 4.370000e-145 525.0
8 TraesCS1A01G151400 chr3D 96.190 420 15 1 1 419 91364264 91363845 0.000000e+00 686.0
9 TraesCS1A01G151400 chr2B 93.888 409 22 3 1 406 182869008 182868600 9.070000e-172 614.0
10 TraesCS1A01G151400 chr2A 91.566 415 32 3 1 412 744924464 744924050 1.990000e-158 569.0
11 TraesCS1A01G151400 chr2A 90.000 160 12 3 409 564 766886333 766886174 2.330000e-48 204.0
12 TraesCS1A01G151400 chr4D 91.198 409 31 5 1 406 209915254 209915660 7.210000e-153 551.0
13 TraesCS1A01G151400 chr6A 95.796 333 3 2 4608 4929 608441612 608441280 1.220000e-145 527.0
14 TraesCS1A01G151400 chr6A 95.495 333 4 2 4608 4929 608467898 608467566 5.650000e-144 521.0
15 TraesCS1A01G151400 chr6A 90.511 137 12 1 409 545 612584916 612584781 3.920000e-41 180.0
16 TraesCS1A01G151400 chr3A 95.495 333 5 2 4607 4929 333269322 333269654 1.570000e-144 523.0
17 TraesCS1A01G151400 chr3A 93.051 331 14 1 4608 4929 680737026 680737356 4.460000e-130 475.0
18 TraesCS1A01G151400 chr3A 80.120 332 54 4 4609 4929 333269791 333269461 2.290000e-58 237.0
19 TraesCS1A01G151400 chr3A 87.059 170 21 1 409 578 11510930 11511098 1.810000e-44 191.0
20 TraesCS1A01G151400 chr3A 97.619 42 1 0 538 579 624857470 624857511 6.840000e-09 73.1
21 TraesCS1A01G151400 chr7A 94.190 327 10 1 4612 4929 515482791 515483117 1.590000e-134 490.0
22 TraesCS1A01G151400 chr7A 88.000 175 20 1 409 583 730467741 730467568 6.470000e-49 206.0
23 TraesCS1A01G151400 chr7A 81.982 111 17 1 192 299 640638954 640639064 1.890000e-14 91.6
24 TraesCS1A01G151400 chr5A 94.671 319 7 1 4621 4929 674163705 674164023 2.060000e-133 486.0
25 TraesCS1A01G151400 chr4A 95.149 268 4 1 4671 4929 235655434 235655701 9.870000e-112 414.0
26 TraesCS1A01G151400 chrUn 98.519 135 2 0 4608 4742 317888423 317888289 6.380000e-59 239.0
27 TraesCS1A01G151400 chrUn 98.519 135 2 0 4608 4742 317891922 317891788 6.380000e-59 239.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G151400 chr1A 259993735 259998663 4928 True 9103.000000 9103 100.000000 1 4929 1 chr1A.!!$R1 4928
1 TraesCS1A01G151400 chr1D 204294477 204298548 4071 True 3119.000000 3912 94.274500 588 4608 2 chr1D.!!$R1 4020
2 TraesCS1A01G151400 chr1B 299973993 299978394 4401 True 1972.333333 3031 93.736667 588 4608 3 chr1B.!!$R1 4020
3 TraesCS1A01G151400 chrUn 317888289 317891922 3633 True 239.000000 239 98.519000 4608 4742 2 chrUn.!!$R1 134

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
320 321 0.107945 GGCCTGAGGTGCTTCACTAG 60.108 60.0 0.00 0.0 34.40 2.57 F
611 612 0.249573 ACAAGCAAATGCACACAGCC 60.250 50.0 8.28 0.0 44.83 4.85 F
2334 2442 0.179150 TCGTGTGCAGTTTTTGGTGC 60.179 50.0 0.00 0.0 40.29 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2029 2079 0.113190 AAAAACAGGGGAGAGGCCAG 59.887 55.0 5.01 0.0 38.95 4.85 R
2578 2692 0.179086 CAAACAAGTGCCCCCACAAC 60.179 55.0 0.00 0.0 44.53 3.32 R
4236 4740 0.323360 GCCCAGCCCACATTACAAGA 60.323 55.0 0.00 0.0 0.00 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.847224 TCTCTTGAAAAACTAGGACTTAAATGT 57.153 29.630 0.00 0.00 0.00 2.71
28 29 9.884465 CTCTTGAAAAACTAGGACTTAAATGTG 57.116 33.333 0.00 0.00 0.00 3.21
29 30 8.349983 TCTTGAAAAACTAGGACTTAAATGTGC 58.650 33.333 0.00 0.00 0.00 4.57
30 31 7.575414 TGAAAAACTAGGACTTAAATGTGCA 57.425 32.000 0.00 0.00 0.00 4.57
31 32 8.177119 TGAAAAACTAGGACTTAAATGTGCAT 57.823 30.769 0.00 0.00 0.00 3.96
32 33 8.081633 TGAAAAACTAGGACTTAAATGTGCATG 58.918 33.333 0.00 0.00 0.00 4.06
33 34 6.515272 AAACTAGGACTTAAATGTGCATGG 57.485 37.500 0.00 0.00 0.00 3.66
34 35 5.435686 ACTAGGACTTAAATGTGCATGGA 57.564 39.130 0.00 0.00 0.00 3.41
35 36 6.006275 ACTAGGACTTAAATGTGCATGGAT 57.994 37.500 0.00 0.00 0.00 3.41
36 37 6.058183 ACTAGGACTTAAATGTGCATGGATC 58.942 40.000 0.00 0.00 0.00 3.36
37 38 5.121380 AGGACTTAAATGTGCATGGATCT 57.879 39.130 0.00 0.00 0.00 2.75
38 39 5.128919 AGGACTTAAATGTGCATGGATCTC 58.871 41.667 0.00 0.00 0.00 2.75
39 40 4.883585 GGACTTAAATGTGCATGGATCTCA 59.116 41.667 0.00 0.00 0.00 3.27
40 41 5.533903 GGACTTAAATGTGCATGGATCTCAT 59.466 40.000 0.00 0.00 36.31 2.90
51 52 5.644977 CATGGATCTCATGCAGCAAATAT 57.355 39.130 0.00 0.00 45.58 1.28
52 53 6.025749 CATGGATCTCATGCAGCAAATATT 57.974 37.500 0.00 0.00 45.58 1.28
53 54 6.455647 CATGGATCTCATGCAGCAAATATTT 58.544 36.000 0.00 0.00 45.58 1.40
54 55 5.838529 TGGATCTCATGCAGCAAATATTTG 58.161 37.500 21.54 21.54 41.03 2.32
85 86 9.936759 GATTTTATATCCAACTAAGAGGAGAGG 57.063 37.037 0.00 0.00 37.34 3.69
86 87 7.857404 TTTATATCCAACTAAGAGGAGAGGG 57.143 40.000 0.00 0.00 37.34 4.30
87 88 3.786213 ATCCAACTAAGAGGAGAGGGT 57.214 47.619 0.00 0.00 37.34 4.34
88 89 4.901785 ATCCAACTAAGAGGAGAGGGTA 57.098 45.455 0.00 0.00 37.34 3.69
89 90 4.687262 TCCAACTAAGAGGAGAGGGTAA 57.313 45.455 0.00 0.00 0.00 2.85
90 91 5.222278 TCCAACTAAGAGGAGAGGGTAAT 57.778 43.478 0.00 0.00 0.00 1.89
91 92 5.209659 TCCAACTAAGAGGAGAGGGTAATC 58.790 45.833 0.00 0.00 0.00 1.75
92 93 4.962995 CCAACTAAGAGGAGAGGGTAATCA 59.037 45.833 0.00 0.00 0.00 2.57
93 94 5.163395 CCAACTAAGAGGAGAGGGTAATCAC 60.163 48.000 0.00 0.00 0.00 3.06
94 95 4.548669 ACTAAGAGGAGAGGGTAATCACC 58.451 47.826 0.00 0.00 44.96 4.02
107 108 4.708177 GGTAATCACCACTGTGCATATCT 58.292 43.478 1.29 0.00 45.04 1.98
108 109 4.512944 GGTAATCACCACTGTGCATATCTG 59.487 45.833 1.29 0.00 45.04 2.90
109 110 4.492494 AATCACCACTGTGCATATCTGA 57.508 40.909 1.29 0.00 42.46 3.27
110 111 3.979101 TCACCACTGTGCATATCTGAA 57.021 42.857 1.29 0.00 42.46 3.02
111 112 4.284829 TCACCACTGTGCATATCTGAAA 57.715 40.909 1.29 0.00 42.46 2.69
112 113 4.650734 TCACCACTGTGCATATCTGAAAA 58.349 39.130 1.29 0.00 42.46 2.29
113 114 5.255687 TCACCACTGTGCATATCTGAAAAT 58.744 37.500 1.29 0.00 42.46 1.82
114 115 6.413892 TCACCACTGTGCATATCTGAAAATA 58.586 36.000 1.29 0.00 42.46 1.40
115 116 6.883756 TCACCACTGTGCATATCTGAAAATAA 59.116 34.615 1.29 0.00 42.46 1.40
116 117 7.392953 TCACCACTGTGCATATCTGAAAATAAA 59.607 33.333 1.29 0.00 42.46 1.40
117 118 7.485913 CACCACTGTGCATATCTGAAAATAAAC 59.514 37.037 1.29 0.00 35.31 2.01
118 119 7.394359 ACCACTGTGCATATCTGAAAATAAACT 59.606 33.333 1.29 0.00 0.00 2.66
119 120 8.892723 CCACTGTGCATATCTGAAAATAAACTA 58.107 33.333 1.29 0.00 0.00 2.24
142 143 9.574516 ACTAATTTTACAAAGACCTGAGATTGT 57.425 29.630 0.00 0.00 39.23 2.71
145 146 9.574516 AATTTTACAAAGACCTGAGATTGTACT 57.425 29.630 0.00 0.00 37.82 2.73
146 147 7.962964 TTTACAAAGACCTGAGATTGTACTG 57.037 36.000 0.00 0.00 37.82 2.74
147 148 4.319177 ACAAAGACCTGAGATTGTACTGC 58.681 43.478 0.00 0.00 34.45 4.40
148 149 4.202357 ACAAAGACCTGAGATTGTACTGCA 60.202 41.667 0.00 0.00 34.45 4.41
149 150 4.623932 AAGACCTGAGATTGTACTGCAA 57.376 40.909 0.00 0.00 41.89 4.08
150 151 4.623932 AGACCTGAGATTGTACTGCAAA 57.376 40.909 0.00 0.00 40.91 3.68
151 152 4.973168 AGACCTGAGATTGTACTGCAAAA 58.027 39.130 0.00 0.00 40.91 2.44
152 153 4.999950 AGACCTGAGATTGTACTGCAAAAG 59.000 41.667 0.00 0.00 40.91 2.27
153 154 4.973168 ACCTGAGATTGTACTGCAAAAGA 58.027 39.130 0.00 0.00 40.91 2.52
154 155 4.999950 ACCTGAGATTGTACTGCAAAAGAG 59.000 41.667 0.00 0.00 40.91 2.85
155 156 4.142730 CCTGAGATTGTACTGCAAAAGAGC 60.143 45.833 0.00 0.00 40.91 4.09
156 157 4.388485 TGAGATTGTACTGCAAAAGAGCA 58.612 39.130 0.00 0.00 40.91 4.26
165 166 3.631145 TGCAAAAGAGCAGTCATCAAC 57.369 42.857 0.00 0.00 40.11 3.18
166 167 2.031769 TGCAAAAGAGCAGTCATCAACG 60.032 45.455 0.00 0.00 40.11 4.10
167 168 2.578495 CAAAAGAGCAGTCATCAACGC 58.422 47.619 0.00 0.00 0.00 4.84
168 169 2.175878 AAAGAGCAGTCATCAACGCT 57.824 45.000 0.00 0.00 39.38 5.07
169 170 1.436600 AAGAGCAGTCATCAACGCTG 58.563 50.000 0.00 0.00 37.69 5.18
171 172 2.482374 GCAGTCATCAACGCTGCC 59.518 61.111 4.60 0.00 46.93 4.85
172 173 2.327343 GCAGTCATCAACGCTGCCA 61.327 57.895 4.60 0.00 46.93 4.92
173 174 1.792301 CAGTCATCAACGCTGCCAG 59.208 57.895 0.00 0.00 0.00 4.85
174 175 2.037136 AGTCATCAACGCTGCCAGC 61.037 57.895 6.63 6.63 38.02 4.85
175 176 2.037136 GTCATCAACGCTGCCAGCT 61.037 57.895 15.80 0.00 39.60 4.24
176 177 1.302752 TCATCAACGCTGCCAGCTT 60.303 52.632 15.80 1.54 39.60 3.74
177 178 0.890542 TCATCAACGCTGCCAGCTTT 60.891 50.000 15.80 9.09 39.60 3.51
180 181 3.840437 AACGCTGCCAGCTTTGAA 58.160 50.000 15.80 0.00 39.60 2.69
181 182 1.656441 AACGCTGCCAGCTTTGAAG 59.344 52.632 15.80 0.00 39.60 3.02
182 183 0.819259 AACGCTGCCAGCTTTGAAGA 60.819 50.000 15.80 0.00 39.60 2.87
183 184 0.819259 ACGCTGCCAGCTTTGAAGAA 60.819 50.000 15.80 0.00 39.60 2.52
184 185 0.524862 CGCTGCCAGCTTTGAAGAAT 59.475 50.000 15.80 0.00 39.60 2.40
185 186 1.739466 CGCTGCCAGCTTTGAAGAATA 59.261 47.619 15.80 0.00 39.60 1.75
186 187 2.223203 CGCTGCCAGCTTTGAAGAATAG 60.223 50.000 15.80 0.00 39.60 1.73
187 188 2.751806 GCTGCCAGCTTTGAAGAATAGT 59.248 45.455 10.04 0.00 38.45 2.12
188 189 3.181502 GCTGCCAGCTTTGAAGAATAGTC 60.182 47.826 10.04 0.00 38.45 2.59
189 190 3.002791 TGCCAGCTTTGAAGAATAGTCG 58.997 45.455 0.00 0.00 0.00 4.18
190 191 3.003480 GCCAGCTTTGAAGAATAGTCGT 58.997 45.455 0.00 0.00 0.00 4.34
191 192 4.181578 GCCAGCTTTGAAGAATAGTCGTA 58.818 43.478 0.00 0.00 0.00 3.43
192 193 4.811557 GCCAGCTTTGAAGAATAGTCGTAT 59.188 41.667 0.00 0.00 0.00 3.06
193 194 5.294552 GCCAGCTTTGAAGAATAGTCGTATT 59.705 40.000 0.00 0.00 0.00 1.89
194 195 6.479001 GCCAGCTTTGAAGAATAGTCGTATTA 59.521 38.462 0.00 0.00 0.00 0.98
195 196 7.516943 GCCAGCTTTGAAGAATAGTCGTATTAC 60.517 40.741 0.00 0.00 0.00 1.89
196 197 7.042658 CCAGCTTTGAAGAATAGTCGTATTACC 60.043 40.741 0.00 0.00 0.00 2.85
197 198 7.491372 CAGCTTTGAAGAATAGTCGTATTACCA 59.509 37.037 0.00 0.00 0.00 3.25
198 199 8.038944 AGCTTTGAAGAATAGTCGTATTACCAA 58.961 33.333 0.00 0.00 0.00 3.67
199 200 8.328864 GCTTTGAAGAATAGTCGTATTACCAAG 58.671 37.037 0.00 0.00 0.00 3.61
200 201 8.712285 TTTGAAGAATAGTCGTATTACCAAGG 57.288 34.615 0.00 0.00 0.00 3.61
201 202 7.649533 TGAAGAATAGTCGTATTACCAAGGA 57.350 36.000 0.00 0.00 0.00 3.36
202 203 7.486647 TGAAGAATAGTCGTATTACCAAGGAC 58.513 38.462 0.00 0.00 33.10 3.85
203 204 7.123098 TGAAGAATAGTCGTATTACCAAGGACA 59.877 37.037 0.00 0.00 34.88 4.02
204 205 7.414222 AGAATAGTCGTATTACCAAGGACAA 57.586 36.000 0.00 0.00 34.88 3.18
205 206 7.844009 AGAATAGTCGTATTACCAAGGACAAA 58.156 34.615 0.00 0.00 34.88 2.83
206 207 8.316214 AGAATAGTCGTATTACCAAGGACAAAA 58.684 33.333 0.00 0.00 34.88 2.44
207 208 7.838771 ATAGTCGTATTACCAAGGACAAAAC 57.161 36.000 0.00 0.00 34.88 2.43
208 209 4.687483 AGTCGTATTACCAAGGACAAAACG 59.313 41.667 0.00 0.00 34.88 3.60
209 210 4.685628 GTCGTATTACCAAGGACAAAACGA 59.314 41.667 0.00 0.00 34.80 3.85
210 211 5.349543 GTCGTATTACCAAGGACAAAACGAT 59.650 40.000 0.00 0.00 38.82 3.73
211 212 5.933463 TCGTATTACCAAGGACAAAACGATT 59.067 36.000 0.00 0.00 32.52 3.34
212 213 6.019152 CGTATTACCAAGGACAAAACGATTG 58.981 40.000 0.00 0.00 0.00 2.67
213 214 4.839668 TTACCAAGGACAAAACGATTGG 57.160 40.909 9.76 0.85 44.79 3.16
214 215 2.938838 ACCAAGGACAAAACGATTGGA 58.061 42.857 9.13 0.00 42.46 3.53
215 216 3.496331 ACCAAGGACAAAACGATTGGAT 58.504 40.909 9.13 0.00 42.46 3.41
216 217 4.658063 ACCAAGGACAAAACGATTGGATA 58.342 39.130 9.13 0.00 42.46 2.59
217 218 5.261216 ACCAAGGACAAAACGATTGGATAT 58.739 37.500 9.13 0.00 42.46 1.63
218 219 5.125417 ACCAAGGACAAAACGATTGGATATG 59.875 40.000 9.13 4.66 42.46 1.78
219 220 5.356751 CCAAGGACAAAACGATTGGATATGA 59.643 40.000 9.76 0.00 42.46 2.15
220 221 6.458751 CCAAGGACAAAACGATTGGATATGAG 60.459 42.308 9.76 0.00 42.46 2.90
221 222 5.126067 AGGACAAAACGATTGGATATGAGG 58.874 41.667 9.76 0.00 0.00 3.86
222 223 5.104527 AGGACAAAACGATTGGATATGAGGA 60.105 40.000 9.76 0.00 0.00 3.71
223 224 5.588648 GGACAAAACGATTGGATATGAGGAA 59.411 40.000 9.76 0.00 0.00 3.36
224 225 6.238484 GGACAAAACGATTGGATATGAGGAAG 60.238 42.308 9.76 0.00 0.00 3.46
225 226 6.180472 ACAAAACGATTGGATATGAGGAAGT 58.820 36.000 9.76 0.00 0.00 3.01
226 227 6.316390 ACAAAACGATTGGATATGAGGAAGTC 59.684 38.462 9.76 0.00 0.00 3.01
227 228 4.244425 ACGATTGGATATGAGGAAGTCG 57.756 45.455 0.00 0.00 0.00 4.18
228 229 3.889538 ACGATTGGATATGAGGAAGTCGA 59.110 43.478 0.00 0.00 0.00 4.20
229 230 4.022762 ACGATTGGATATGAGGAAGTCGAG 60.023 45.833 0.00 0.00 0.00 4.04
230 231 4.617067 CGATTGGATATGAGGAAGTCGAGG 60.617 50.000 0.00 0.00 0.00 4.63
231 232 3.314307 TGGATATGAGGAAGTCGAGGT 57.686 47.619 0.00 0.00 0.00 3.85
232 233 2.959030 TGGATATGAGGAAGTCGAGGTG 59.041 50.000 0.00 0.00 0.00 4.00
233 234 2.297597 GGATATGAGGAAGTCGAGGTGG 59.702 54.545 0.00 0.00 0.00 4.61
234 235 2.526888 TATGAGGAAGTCGAGGTGGT 57.473 50.000 0.00 0.00 0.00 4.16
235 236 1.645710 ATGAGGAAGTCGAGGTGGTT 58.354 50.000 0.00 0.00 0.00 3.67
236 237 2.297698 TGAGGAAGTCGAGGTGGTTA 57.702 50.000 0.00 0.00 0.00 2.85
237 238 2.816411 TGAGGAAGTCGAGGTGGTTAT 58.184 47.619 0.00 0.00 0.00 1.89
238 239 3.170717 TGAGGAAGTCGAGGTGGTTATT 58.829 45.455 0.00 0.00 0.00 1.40
239 240 3.056107 TGAGGAAGTCGAGGTGGTTATTG 60.056 47.826 0.00 0.00 0.00 1.90
240 241 2.007608 GGAAGTCGAGGTGGTTATTGC 58.992 52.381 0.00 0.00 0.00 3.56
241 242 2.614481 GGAAGTCGAGGTGGTTATTGCA 60.614 50.000 0.00 0.00 0.00 4.08
242 243 2.851263 AGTCGAGGTGGTTATTGCAA 57.149 45.000 0.00 0.00 0.00 4.08
243 244 3.134574 AGTCGAGGTGGTTATTGCAAA 57.865 42.857 1.71 0.00 0.00 3.68
244 245 3.482436 AGTCGAGGTGGTTATTGCAAAA 58.518 40.909 1.71 0.00 0.00 2.44
245 246 3.502211 AGTCGAGGTGGTTATTGCAAAAG 59.498 43.478 1.71 0.00 0.00 2.27
246 247 3.252458 GTCGAGGTGGTTATTGCAAAAGT 59.748 43.478 1.71 0.00 0.00 2.66
247 248 3.500680 TCGAGGTGGTTATTGCAAAAGTC 59.499 43.478 1.71 0.00 0.00 3.01
248 249 3.252215 CGAGGTGGTTATTGCAAAAGTCA 59.748 43.478 1.71 0.00 0.00 3.41
249 250 4.261405 CGAGGTGGTTATTGCAAAAGTCAA 60.261 41.667 1.71 0.00 0.00 3.18
250 251 5.200368 AGGTGGTTATTGCAAAAGTCAAG 57.800 39.130 1.71 0.00 0.00 3.02
251 252 4.649218 AGGTGGTTATTGCAAAAGTCAAGT 59.351 37.500 1.71 0.00 0.00 3.16
252 253 5.128663 AGGTGGTTATTGCAAAAGTCAAGTT 59.871 36.000 1.71 0.00 0.00 2.66
253 254 5.815222 GGTGGTTATTGCAAAAGTCAAGTTT 59.185 36.000 1.71 0.00 0.00 2.66
254 255 6.315144 GGTGGTTATTGCAAAAGTCAAGTTTT 59.685 34.615 1.71 0.00 0.00 2.43
255 256 7.492994 GGTGGTTATTGCAAAAGTCAAGTTTTA 59.507 33.333 1.71 0.00 0.00 1.52
256 257 9.040939 GTGGTTATTGCAAAAGTCAAGTTTTAT 57.959 29.630 1.71 0.00 0.00 1.40
264 265 9.820229 TGCAAAAGTCAAGTTTTATATCTAACG 57.180 29.630 0.00 0.00 0.00 3.18
275 276 8.804204 AGTTTTATATCTAACGAGTATCAGGGG 58.196 37.037 0.00 0.00 33.17 4.79
276 277 7.713734 TTTATATCTAACGAGTATCAGGGGG 57.286 40.000 0.00 0.00 33.17 5.40
293 294 3.564235 GGGGGTTTTCGTGAAATGTAC 57.436 47.619 0.00 0.00 0.00 2.90
294 295 2.885894 GGGGGTTTTCGTGAAATGTACA 59.114 45.455 0.00 0.00 0.00 2.90
295 296 3.508402 GGGGGTTTTCGTGAAATGTACAT 59.492 43.478 1.41 1.41 0.00 2.29
296 297 4.021807 GGGGGTTTTCGTGAAATGTACATT 60.022 41.667 15.47 15.47 0.00 2.71
297 298 5.183522 GGGGGTTTTCGTGAAATGTACATTA 59.816 40.000 21.07 4.21 0.00 1.90
298 299 6.294620 GGGGGTTTTCGTGAAATGTACATTAA 60.295 38.462 21.07 10.27 0.00 1.40
299 300 6.804783 GGGGTTTTCGTGAAATGTACATTAAG 59.195 38.462 21.07 9.37 0.00 1.85
300 301 7.364970 GGGTTTTCGTGAAATGTACATTAAGT 58.635 34.615 21.07 6.25 0.00 2.24
301 302 7.325097 GGGTTTTCGTGAAATGTACATTAAGTG 59.675 37.037 21.07 11.88 0.00 3.16
302 303 7.325097 GGTTTTCGTGAAATGTACATTAAGTGG 59.675 37.037 21.07 10.11 0.00 4.00
303 304 5.539582 TCGTGAAATGTACATTAAGTGGC 57.460 39.130 21.07 8.09 0.00 5.01
304 305 4.393680 TCGTGAAATGTACATTAAGTGGCC 59.606 41.667 21.07 0.00 0.00 5.36
305 306 4.394920 CGTGAAATGTACATTAAGTGGCCT 59.605 41.667 21.07 3.22 0.00 5.19
306 307 5.640732 GTGAAATGTACATTAAGTGGCCTG 58.359 41.667 21.07 0.00 0.00 4.85
307 308 5.414454 GTGAAATGTACATTAAGTGGCCTGA 59.586 40.000 21.07 0.00 0.00 3.86
308 309 5.647658 TGAAATGTACATTAAGTGGCCTGAG 59.352 40.000 21.07 0.00 0.00 3.35
309 310 3.627395 TGTACATTAAGTGGCCTGAGG 57.373 47.619 3.32 0.00 0.00 3.86
310 311 2.910319 TGTACATTAAGTGGCCTGAGGT 59.090 45.455 3.32 0.00 0.00 3.85
311 312 2.496899 ACATTAAGTGGCCTGAGGTG 57.503 50.000 3.32 0.00 0.00 4.00
312 313 1.098050 CATTAAGTGGCCTGAGGTGC 58.902 55.000 3.32 0.00 0.00 5.01
313 314 0.995024 ATTAAGTGGCCTGAGGTGCT 59.005 50.000 3.32 0.00 0.00 4.40
314 315 0.771127 TTAAGTGGCCTGAGGTGCTT 59.229 50.000 3.32 5.06 0.00 3.91
315 316 0.324943 TAAGTGGCCTGAGGTGCTTC 59.675 55.000 3.32 0.00 0.00 3.86
316 317 1.708993 AAGTGGCCTGAGGTGCTTCA 61.709 55.000 3.32 0.00 0.00 3.02
317 318 1.968540 GTGGCCTGAGGTGCTTCAC 60.969 63.158 3.32 0.00 0.00 3.18
318 319 2.149383 TGGCCTGAGGTGCTTCACT 61.149 57.895 3.32 0.00 34.40 3.41
319 320 0.835971 TGGCCTGAGGTGCTTCACTA 60.836 55.000 3.32 0.00 34.40 2.74
320 321 0.107945 GGCCTGAGGTGCTTCACTAG 60.108 60.000 0.00 0.00 34.40 2.57
321 322 0.898320 GCCTGAGGTGCTTCACTAGA 59.102 55.000 0.00 0.00 34.40 2.43
322 323 1.276421 GCCTGAGGTGCTTCACTAGAA 59.724 52.381 0.00 0.00 34.40 2.10
323 324 2.093235 GCCTGAGGTGCTTCACTAGAAT 60.093 50.000 0.00 0.00 34.40 2.40
324 325 3.791245 CCTGAGGTGCTTCACTAGAATC 58.209 50.000 0.00 0.00 34.40 2.52
325 326 3.196469 CCTGAGGTGCTTCACTAGAATCA 59.804 47.826 0.00 0.00 34.40 2.57
326 327 4.431809 CTGAGGTGCTTCACTAGAATCAG 58.568 47.826 0.00 0.00 31.15 2.90
327 328 4.089361 TGAGGTGCTTCACTAGAATCAGA 58.911 43.478 0.00 0.00 31.15 3.27
328 329 4.159321 TGAGGTGCTTCACTAGAATCAGAG 59.841 45.833 0.00 0.00 31.15 3.35
329 330 3.118811 AGGTGCTTCACTAGAATCAGAGC 60.119 47.826 0.00 0.00 31.15 4.09
330 331 3.194062 GTGCTTCACTAGAATCAGAGCC 58.806 50.000 0.00 0.00 31.15 4.70
331 332 2.833943 TGCTTCACTAGAATCAGAGCCA 59.166 45.455 0.00 0.00 32.31 4.75
332 333 3.453717 TGCTTCACTAGAATCAGAGCCAT 59.546 43.478 0.00 0.00 32.31 4.40
333 334 4.651045 TGCTTCACTAGAATCAGAGCCATA 59.349 41.667 0.00 0.00 32.31 2.74
334 335 4.987912 GCTTCACTAGAATCAGAGCCATAC 59.012 45.833 0.00 0.00 32.31 2.39
335 336 5.452496 GCTTCACTAGAATCAGAGCCATACA 60.452 44.000 0.00 0.00 32.31 2.29
336 337 6.737720 TTCACTAGAATCAGAGCCATACAT 57.262 37.500 0.00 0.00 0.00 2.29
337 338 7.524532 GCTTCACTAGAATCAGAGCCATACATA 60.525 40.741 0.00 0.00 32.31 2.29
338 339 7.220741 TCACTAGAATCAGAGCCATACATAC 57.779 40.000 0.00 0.00 0.00 2.39
339 340 6.209589 TCACTAGAATCAGAGCCATACATACC 59.790 42.308 0.00 0.00 0.00 2.73
340 341 6.210385 CACTAGAATCAGAGCCATACATACCT 59.790 42.308 0.00 0.00 0.00 3.08
341 342 5.480642 AGAATCAGAGCCATACATACCTG 57.519 43.478 0.00 0.00 0.00 4.00
342 343 5.150715 AGAATCAGAGCCATACATACCTGA 58.849 41.667 0.00 0.00 35.48 3.86
343 344 5.784390 AGAATCAGAGCCATACATACCTGAT 59.216 40.000 0.00 0.00 41.48 2.90
344 345 5.674052 ATCAGAGCCATACATACCTGATC 57.326 43.478 0.00 0.00 36.90 2.92
345 346 4.745351 TCAGAGCCATACATACCTGATCT 58.255 43.478 0.00 0.00 0.00 2.75
346 347 4.525874 TCAGAGCCATACATACCTGATCTG 59.474 45.833 0.00 0.00 34.39 2.90
347 348 4.525874 CAGAGCCATACATACCTGATCTGA 59.474 45.833 0.38 0.00 34.89 3.27
348 349 5.187381 CAGAGCCATACATACCTGATCTGAT 59.813 44.000 0.38 0.00 34.89 2.90
349 350 5.187381 AGAGCCATACATACCTGATCTGATG 59.813 44.000 0.38 0.90 0.00 3.07
350 351 4.224594 AGCCATACATACCTGATCTGATGG 59.775 45.833 0.38 6.32 36.49 3.51
351 352 4.511527 CCATACATACCTGATCTGATGGC 58.488 47.826 0.38 0.00 0.00 4.40
352 353 4.511527 CATACATACCTGATCTGATGGCC 58.488 47.826 0.00 0.00 0.00 5.36
353 354 1.701847 ACATACCTGATCTGATGGCCC 59.298 52.381 0.00 0.00 0.00 5.80
354 355 1.701292 CATACCTGATCTGATGGCCCA 59.299 52.381 0.00 0.00 0.00 5.36
355 356 2.123018 TACCTGATCTGATGGCCCAT 57.877 50.000 0.00 0.00 0.00 4.00
356 357 2.123018 ACCTGATCTGATGGCCCATA 57.877 50.000 0.00 0.00 0.00 2.74
357 358 2.640651 ACCTGATCTGATGGCCCATAT 58.359 47.619 0.00 0.00 0.00 1.78
358 359 2.991713 ACCTGATCTGATGGCCCATATT 59.008 45.455 0.00 0.00 0.00 1.28
359 360 3.009916 ACCTGATCTGATGGCCCATATTC 59.990 47.826 0.00 0.00 0.00 1.75
360 361 3.009805 CCTGATCTGATGGCCCATATTCA 59.990 47.826 0.00 0.00 0.00 2.57
361 362 4.325109 CCTGATCTGATGGCCCATATTCAT 60.325 45.833 0.00 0.00 0.00 2.57
362 363 5.262009 CTGATCTGATGGCCCATATTCATT 58.738 41.667 0.00 0.00 0.00 2.57
363 364 5.647230 TGATCTGATGGCCCATATTCATTT 58.353 37.500 0.00 0.00 0.00 2.32
364 365 6.079336 TGATCTGATGGCCCATATTCATTTT 58.921 36.000 0.00 0.00 0.00 1.82
365 366 6.555738 TGATCTGATGGCCCATATTCATTTTT 59.444 34.615 0.00 0.00 0.00 1.94
366 367 6.409524 TCTGATGGCCCATATTCATTTTTC 57.590 37.500 0.00 0.00 0.00 2.29
367 368 6.138263 TCTGATGGCCCATATTCATTTTTCT 58.862 36.000 0.00 0.00 0.00 2.52
368 369 7.296856 TCTGATGGCCCATATTCATTTTTCTA 58.703 34.615 0.00 0.00 0.00 2.10
369 370 7.951806 TCTGATGGCCCATATTCATTTTTCTAT 59.048 33.333 0.00 0.00 0.00 1.98
370 371 8.495160 TGATGGCCCATATTCATTTTTCTATT 57.505 30.769 0.00 0.00 0.00 1.73
371 372 8.936787 TGATGGCCCATATTCATTTTTCTATTT 58.063 29.630 0.00 0.00 0.00 1.40
372 373 9.783081 GATGGCCCATATTCATTTTTCTATTTT 57.217 29.630 0.00 0.00 0.00 1.82
374 375 9.393512 TGGCCCATATTCATTTTTCTATTTTTG 57.606 29.630 0.00 0.00 0.00 2.44
375 376 9.394767 GGCCCATATTCATTTTTCTATTTTTGT 57.605 29.630 0.00 0.00 0.00 2.83
396 397 9.817809 TTTTGTACTACATGTCCAGATTCTATC 57.182 33.333 0.00 0.00 0.00 2.08
397 398 7.526142 TGTACTACATGTCCAGATTCTATCC 57.474 40.000 0.00 0.00 0.00 2.59
398 399 7.298374 TGTACTACATGTCCAGATTCTATCCT 58.702 38.462 0.00 0.00 0.00 3.24
399 400 8.445588 TGTACTACATGTCCAGATTCTATCCTA 58.554 37.037 0.00 0.00 0.00 2.94
400 401 8.952278 GTACTACATGTCCAGATTCTATCCTAG 58.048 40.741 0.00 0.00 0.00 3.02
401 402 7.531317 ACTACATGTCCAGATTCTATCCTAGT 58.469 38.462 0.00 0.00 0.00 2.57
402 403 8.007742 ACTACATGTCCAGATTCTATCCTAGTT 58.992 37.037 0.00 0.00 0.00 2.24
403 404 7.060383 ACATGTCCAGATTCTATCCTAGTTG 57.940 40.000 0.00 0.00 0.00 3.16
404 405 5.537300 TGTCCAGATTCTATCCTAGTTGC 57.463 43.478 0.00 0.00 0.00 4.17
405 406 5.211973 TGTCCAGATTCTATCCTAGTTGCT 58.788 41.667 0.00 0.00 0.00 3.91
406 407 5.663106 TGTCCAGATTCTATCCTAGTTGCTT 59.337 40.000 0.00 0.00 0.00 3.91
407 408 6.156949 TGTCCAGATTCTATCCTAGTTGCTTT 59.843 38.462 0.00 0.00 0.00 3.51
408 409 6.704050 GTCCAGATTCTATCCTAGTTGCTTTC 59.296 42.308 0.00 0.00 0.00 2.62
409 410 6.384015 TCCAGATTCTATCCTAGTTGCTTTCA 59.616 38.462 0.00 0.00 0.00 2.69
410 411 6.481644 CCAGATTCTATCCTAGTTGCTTTCAC 59.518 42.308 0.00 0.00 0.00 3.18
411 412 7.044181 CAGATTCTATCCTAGTTGCTTTCACA 58.956 38.462 0.00 0.00 0.00 3.58
412 413 7.714377 CAGATTCTATCCTAGTTGCTTTCACAT 59.286 37.037 0.00 0.00 0.00 3.21
413 414 7.714377 AGATTCTATCCTAGTTGCTTTCACATG 59.286 37.037 0.00 0.00 0.00 3.21
414 415 6.544928 TCTATCCTAGTTGCTTTCACATGA 57.455 37.500 0.00 0.00 0.00 3.07
415 416 7.129457 TCTATCCTAGTTGCTTTCACATGAT 57.871 36.000 0.00 0.00 0.00 2.45
416 417 7.568349 TCTATCCTAGTTGCTTTCACATGATT 58.432 34.615 0.00 0.00 0.00 2.57
417 418 8.704668 TCTATCCTAGTTGCTTTCACATGATTA 58.295 33.333 0.00 0.00 0.00 1.75
418 419 6.985188 TCCTAGTTGCTTTCACATGATTAC 57.015 37.500 0.00 0.00 0.00 1.89
419 420 5.880332 TCCTAGTTGCTTTCACATGATTACC 59.120 40.000 0.00 0.00 0.00 2.85
420 421 5.882557 CCTAGTTGCTTTCACATGATTACCT 59.117 40.000 0.00 0.00 0.00 3.08
421 422 5.633830 AGTTGCTTTCACATGATTACCTG 57.366 39.130 0.00 0.00 0.00 4.00
422 423 4.460382 AGTTGCTTTCACATGATTACCTGG 59.540 41.667 0.00 0.00 0.00 4.45
423 424 3.355378 TGCTTTCACATGATTACCTGGG 58.645 45.455 0.00 0.00 0.00 4.45
424 425 3.245229 TGCTTTCACATGATTACCTGGGT 60.245 43.478 0.00 0.00 0.00 4.51
425 426 4.018870 TGCTTTCACATGATTACCTGGGTA 60.019 41.667 0.00 0.00 0.00 3.69
426 427 4.335594 GCTTTCACATGATTACCTGGGTAC 59.664 45.833 0.00 0.00 0.00 3.34
445 446 2.975799 ACGTTGGGCGCGTGATTT 60.976 55.556 8.43 0.00 46.11 2.17
446 447 2.501650 CGTTGGGCGCGTGATTTG 60.502 61.111 8.43 0.00 0.00 2.32
447 448 2.642700 GTTGGGCGCGTGATTTGT 59.357 55.556 8.43 0.00 0.00 2.83
448 449 1.007849 GTTGGGCGCGTGATTTGTT 60.008 52.632 8.43 0.00 0.00 2.83
449 450 1.007964 TTGGGCGCGTGATTTGTTG 60.008 52.632 8.43 0.00 0.00 3.33
450 451 2.126502 GGGCGCGTGATTTGTTGG 60.127 61.111 8.43 0.00 0.00 3.77
451 452 2.804931 GGCGCGTGATTTGTTGGC 60.805 61.111 8.43 0.00 0.00 4.52
452 453 2.255252 GCGCGTGATTTGTTGGCT 59.745 55.556 8.43 0.00 0.00 4.75
453 454 1.371635 GCGCGTGATTTGTTGGCTT 60.372 52.632 8.43 0.00 0.00 4.35
454 455 1.608093 GCGCGTGATTTGTTGGCTTG 61.608 55.000 8.43 0.00 0.00 4.01
455 456 1.003262 CGCGTGATTTGTTGGCTTGG 61.003 55.000 0.00 0.00 0.00 3.61
456 457 1.284297 GCGTGATTTGTTGGCTTGGC 61.284 55.000 0.00 0.00 0.00 4.52
457 458 1.003262 CGTGATTTGTTGGCTTGGCG 61.003 55.000 0.00 0.00 0.00 5.69
458 459 1.006337 TGATTTGTTGGCTTGGCGC 60.006 52.632 0.00 0.00 38.13 6.53
459 460 2.049248 ATTTGTTGGCTTGGCGCG 60.049 55.556 0.00 0.00 40.44 6.86
460 461 4.940593 TTTGTTGGCTTGGCGCGC 62.941 61.111 25.94 25.94 40.44 6.86
467 468 4.705519 GCTTGGCGCGCATGTGTT 62.706 61.111 34.42 0.00 0.00 3.32
468 469 2.801996 CTTGGCGCGCATGTGTTG 60.802 61.111 34.42 11.04 0.00 3.33
479 480 2.768253 CATGTGTTGCTACTGAGGGA 57.232 50.000 0.00 0.00 0.00 4.20
480 481 2.625737 CATGTGTTGCTACTGAGGGAG 58.374 52.381 0.00 0.00 0.00 4.30
481 482 2.009681 TGTGTTGCTACTGAGGGAGA 57.990 50.000 0.00 0.00 0.00 3.71
482 483 1.895798 TGTGTTGCTACTGAGGGAGAG 59.104 52.381 0.00 0.00 0.00 3.20
483 484 2.171840 GTGTTGCTACTGAGGGAGAGA 58.828 52.381 0.00 0.00 0.00 3.10
484 485 2.763448 GTGTTGCTACTGAGGGAGAGAT 59.237 50.000 0.00 0.00 0.00 2.75
485 486 3.196685 GTGTTGCTACTGAGGGAGAGATT 59.803 47.826 0.00 0.00 0.00 2.40
486 487 3.840666 TGTTGCTACTGAGGGAGAGATTT 59.159 43.478 0.00 0.00 0.00 2.17
487 488 4.287067 TGTTGCTACTGAGGGAGAGATTTT 59.713 41.667 0.00 0.00 0.00 1.82
488 489 4.744795 TGCTACTGAGGGAGAGATTTTC 57.255 45.455 0.00 0.00 0.00 2.29
489 490 4.357325 TGCTACTGAGGGAGAGATTTTCT 58.643 43.478 0.00 0.00 39.43 2.52
490 491 4.780021 TGCTACTGAGGGAGAGATTTTCTT 59.220 41.667 0.00 0.00 35.87 2.52
491 492 5.249393 TGCTACTGAGGGAGAGATTTTCTTT 59.751 40.000 0.00 0.00 35.87 2.52
492 493 6.176896 GCTACTGAGGGAGAGATTTTCTTTT 58.823 40.000 0.00 0.00 35.87 2.27
493 494 7.038302 TGCTACTGAGGGAGAGATTTTCTTTTA 60.038 37.037 0.00 0.00 35.87 1.52
494 495 7.990314 GCTACTGAGGGAGAGATTTTCTTTTAT 59.010 37.037 0.00 0.00 35.87 1.40
495 496 9.323985 CTACTGAGGGAGAGATTTTCTTTTATG 57.676 37.037 0.00 0.00 35.87 1.90
496 497 7.115414 ACTGAGGGAGAGATTTTCTTTTATGG 58.885 38.462 0.00 0.00 35.87 2.74
497 498 6.426587 TGAGGGAGAGATTTTCTTTTATGGG 58.573 40.000 0.00 0.00 35.87 4.00
498 499 6.217487 TGAGGGAGAGATTTTCTTTTATGGGA 59.783 38.462 0.00 0.00 35.87 4.37
499 500 7.091811 TGAGGGAGAGATTTTCTTTTATGGGAT 60.092 37.037 0.00 0.00 35.87 3.85
500 501 7.293828 AGGGAGAGATTTTCTTTTATGGGATC 58.706 38.462 0.00 0.00 35.87 3.36
501 502 6.205658 GGGAGAGATTTTCTTTTATGGGATCG 59.794 42.308 0.00 0.00 35.87 3.69
502 503 6.992715 GGAGAGATTTTCTTTTATGGGATCGA 59.007 38.462 0.00 0.00 35.87 3.59
503 504 7.172361 GGAGAGATTTTCTTTTATGGGATCGAG 59.828 40.741 0.00 0.00 35.87 4.04
504 505 6.995091 AGAGATTTTCTTTTATGGGATCGAGG 59.005 38.462 0.00 0.00 29.61 4.63
505 506 6.064717 AGATTTTCTTTTATGGGATCGAGGG 58.935 40.000 0.00 0.00 0.00 4.30
506 507 3.857157 TTCTTTTATGGGATCGAGGGG 57.143 47.619 0.00 0.00 0.00 4.79
507 508 3.054779 TCTTTTATGGGATCGAGGGGA 57.945 47.619 0.00 0.00 0.00 4.81
508 509 2.704065 TCTTTTATGGGATCGAGGGGAC 59.296 50.000 0.00 0.00 0.00 4.46
522 523 2.509166 GGGGACCGATTCTTTCCTTT 57.491 50.000 0.00 0.00 40.86 3.11
523 524 2.366533 GGGGACCGATTCTTTCCTTTC 58.633 52.381 0.00 0.00 40.86 2.62
524 525 2.366533 GGGACCGATTCTTTCCTTTCC 58.633 52.381 0.00 0.00 0.00 3.13
525 526 2.026169 GGGACCGATTCTTTCCTTTCCT 60.026 50.000 0.00 0.00 0.00 3.36
526 527 3.010420 GGACCGATTCTTTCCTTTCCTG 58.990 50.000 0.00 0.00 0.00 3.86
527 528 3.307480 GGACCGATTCTTTCCTTTCCTGA 60.307 47.826 0.00 0.00 0.00 3.86
528 529 4.518249 GACCGATTCTTTCCTTTCCTGAT 58.482 43.478 0.00 0.00 0.00 2.90
529 530 4.265073 ACCGATTCTTTCCTTTCCTGATG 58.735 43.478 0.00 0.00 0.00 3.07
530 531 3.065925 CCGATTCTTTCCTTTCCTGATGC 59.934 47.826 0.00 0.00 0.00 3.91
531 532 3.065925 CGATTCTTTCCTTTCCTGATGCC 59.934 47.826 0.00 0.00 0.00 4.40
532 533 3.814504 TTCTTTCCTTTCCTGATGCCT 57.185 42.857 0.00 0.00 0.00 4.75
533 534 3.077484 TCTTTCCTTTCCTGATGCCTG 57.923 47.619 0.00 0.00 0.00 4.85
534 535 1.475682 CTTTCCTTTCCTGATGCCTGC 59.524 52.381 0.00 0.00 0.00 4.85
535 536 0.700564 TTCCTTTCCTGATGCCTGCT 59.299 50.000 0.00 0.00 0.00 4.24
536 537 0.254178 TCCTTTCCTGATGCCTGCTC 59.746 55.000 0.00 0.00 0.00 4.26
537 538 1.094073 CCTTTCCTGATGCCTGCTCG 61.094 60.000 0.00 0.00 0.00 5.03
538 539 1.078214 TTTCCTGATGCCTGCTCGG 60.078 57.895 0.00 0.00 0.00 4.63
539 540 2.541547 TTTCCTGATGCCTGCTCGGG 62.542 60.000 9.05 9.05 40.04 5.14
540 541 3.473647 CCTGATGCCTGCTCGGGA 61.474 66.667 9.52 0.00 41.00 5.14
541 542 2.108566 CTGATGCCTGCTCGGGAG 59.891 66.667 0.00 0.00 36.14 4.30
542 543 2.685017 TGATGCCTGCTCGGGAGT 60.685 61.111 0.00 0.00 36.14 3.85
543 544 2.202987 GATGCCTGCTCGGGAGTG 60.203 66.667 0.00 0.00 36.14 3.51
550 551 4.577246 GCTCGGGAGTGCTAGCGG 62.577 72.222 10.77 0.00 45.24 5.52
551 552 3.905678 CTCGGGAGTGCTAGCGGG 61.906 72.222 10.77 0.00 0.00 6.13
555 556 4.096003 GGAGTGCTAGCGGGCCAA 62.096 66.667 10.77 0.00 0.00 4.52
556 557 2.820037 GAGTGCTAGCGGGCCAAC 60.820 66.667 10.77 0.98 0.00 3.77
557 558 4.760047 AGTGCTAGCGGGCCAACG 62.760 66.667 10.77 0.00 0.00 4.10
574 575 4.944372 GGCCGCCCGATAGACACG 62.944 72.222 0.00 0.00 39.76 4.49
575 576 4.203076 GCCGCCCGATAGACACGT 62.203 66.667 0.00 0.00 39.76 4.49
576 577 2.025727 CCGCCCGATAGACACGTC 59.974 66.667 0.00 0.00 39.76 4.34
577 578 2.025727 CGCCCGATAGACACGTCC 59.974 66.667 0.00 0.00 39.76 4.79
578 579 2.478890 CGCCCGATAGACACGTCCT 61.479 63.158 0.00 0.00 39.76 3.85
579 580 1.162181 CGCCCGATAGACACGTCCTA 61.162 60.000 0.00 0.00 39.76 2.94
580 581 1.027357 GCCCGATAGACACGTCCTAA 58.973 55.000 0.00 0.00 39.76 2.69
581 582 1.406539 GCCCGATAGACACGTCCTAAA 59.593 52.381 0.00 0.00 39.76 1.85
582 583 2.159198 GCCCGATAGACACGTCCTAAAA 60.159 50.000 0.00 0.00 39.76 1.52
583 584 3.676873 GCCCGATAGACACGTCCTAAAAA 60.677 47.826 0.00 0.00 39.76 1.94
611 612 0.249573 ACAAGCAAATGCACACAGCC 60.250 50.000 8.28 0.00 44.83 4.85
649 655 2.272146 GAAGATCCTGCGCCCCAA 59.728 61.111 4.18 0.00 0.00 4.12
650 656 1.821332 GAAGATCCTGCGCCCCAAG 60.821 63.158 4.18 0.00 0.00 3.61
664 670 5.172205 GCGCCCCAAGTAAAAATGAAAATA 58.828 37.500 0.00 0.00 0.00 1.40
828 851 1.136961 TAGCAACACCCACCCATCCA 61.137 55.000 0.00 0.00 0.00 3.41
857 880 1.075896 CGCCCCCTCTTCCTCTACT 60.076 63.158 0.00 0.00 0.00 2.57
858 881 1.110518 CGCCCCCTCTTCCTCTACTC 61.111 65.000 0.00 0.00 0.00 2.59
859 882 0.761323 GCCCCCTCTTCCTCTACTCC 60.761 65.000 0.00 0.00 0.00 3.85
860 883 0.637195 CCCCCTCTTCCTCTACTCCA 59.363 60.000 0.00 0.00 0.00 3.86
861 884 1.008449 CCCCCTCTTCCTCTACTCCAA 59.992 57.143 0.00 0.00 0.00 3.53
863 886 2.502130 CCCCTCTTCCTCTACTCCAAAC 59.498 54.545 0.00 0.00 0.00 2.93
864 887 2.502130 CCCTCTTCCTCTACTCCAAACC 59.498 54.545 0.00 0.00 0.00 3.27
865 888 3.173965 CCTCTTCCTCTACTCCAAACCA 58.826 50.000 0.00 0.00 0.00 3.67
866 889 3.583086 CCTCTTCCTCTACTCCAAACCAA 59.417 47.826 0.00 0.00 0.00 3.67
873 902 1.630878 CTACTCCAAACCAAGCCTCCT 59.369 52.381 0.00 0.00 0.00 3.69
1288 1317 2.507324 GGGAGAACGTGCTCGAGC 60.507 66.667 30.42 30.42 40.62 5.03
1324 1356 4.847444 GAGCCTTCTCCTGCGCCC 62.847 72.222 4.18 0.00 33.19 6.13
1342 1374 0.793861 CCGCGATTTTCTTCGGTTCA 59.206 50.000 8.23 0.00 39.49 3.18
1381 1413 3.334413 GGGGGATTATAACCGTGCC 57.666 57.895 0.00 0.00 0.00 5.01
1431 1463 4.516365 AAGCTTTGGATTGCTTCTTCTG 57.484 40.909 0.00 0.00 45.09 3.02
1514 1546 1.644786 CGGGGCTCGAATTTGGTGTC 61.645 60.000 0.00 0.00 42.43 3.67
1539 1571 7.174946 TCGATGCTATTTTCCCCAATATCTTTC 59.825 37.037 0.00 0.00 0.00 2.62
1594 1630 0.790814 GTCCCAACTCTTCTTTCGCG 59.209 55.000 0.00 0.00 0.00 5.87
1596 1632 1.071605 CCCAACTCTTCTTTCGCGAG 58.928 55.000 9.59 0.00 0.00 5.03
1601 1637 2.395654 ACTCTTCTTTCGCGAGTTGAC 58.604 47.619 9.59 0.00 34.55 3.18
1645 1682 3.896122 TGCTTAAATTTCGGTGTGCTTC 58.104 40.909 0.00 0.00 0.00 3.86
1651 1688 1.878953 TTTCGGTGTGCTTCTCCTTC 58.121 50.000 0.00 0.00 0.00 3.46
1662 1699 5.888161 TGTGCTTCTCCTTCTTTCTTTTCTT 59.112 36.000 0.00 0.00 0.00 2.52
1714 1754 1.926426 AATTTCCTGGCCCTCTCCGG 61.926 60.000 0.00 0.00 0.00 5.14
1771 1814 5.623956 TTCCAAGAACCACTTCTCAGTAA 57.376 39.130 0.00 0.00 35.52 2.24
1802 1845 2.517959 AGAAATTAGTGCCAAGCAGCA 58.482 42.857 0.00 0.00 40.08 4.41
1906 1956 1.892474 TGCACCCCAAAGCTCAATTAC 59.108 47.619 0.00 0.00 0.00 1.89
1909 1959 3.055891 GCACCCCAAAGCTCAATTACAAT 60.056 43.478 0.00 0.00 0.00 2.71
1917 1967 7.189512 CCAAAGCTCAATTACAATACTAGTGC 58.810 38.462 5.39 0.00 0.00 4.40
1918 1968 7.066284 CCAAAGCTCAATTACAATACTAGTGCT 59.934 37.037 5.39 0.00 0.00 4.40
1930 1980 3.268023 ACTAGTGCTGTATTTGGCCTC 57.732 47.619 3.32 0.00 0.00 4.70
1990 2040 6.295067 CCTTTTCGTTAGTGGGATGGAAAAAT 60.295 38.462 0.00 0.00 34.25 1.82
2008 2058 1.826447 ATCATCCTCCTTTCCCTCCC 58.174 55.000 0.00 0.00 0.00 4.30
2029 2079 1.899814 GTTCTTTCCACCATTTCCCCC 59.100 52.381 0.00 0.00 0.00 5.40
2062 2134 5.415221 CCCTGTTTTTCTTTGCTTGTTGTA 58.585 37.500 0.00 0.00 0.00 2.41
2106 2178 7.882179 TCCCAATCTTTTAGTCTTTTAGCAAC 58.118 34.615 0.00 0.00 0.00 4.17
2198 2270 5.488919 ACCTCATTTCTTGATGGGTTCTCTA 59.511 40.000 0.00 0.00 32.72 2.43
2199 2271 5.819901 CCTCATTTCTTGATGGGTTCTCTAC 59.180 44.000 0.00 0.00 32.72 2.59
2200 2272 6.352565 CCTCATTTCTTGATGGGTTCTCTACT 60.353 42.308 0.00 0.00 32.72 2.57
2210 2282 5.705397 TGGGTTCTCTACTACTACTAGCA 57.295 43.478 0.00 0.00 0.00 3.49
2238 2310 1.144913 TCTTTGGGTTCTGGAAGGTGG 59.855 52.381 0.00 0.00 0.00 4.61
2316 2424 2.176247 TCCCCCTGTACCAGAGATTC 57.824 55.000 0.00 0.00 32.44 2.52
2330 2438 3.970610 CAGAGATTCGTGTGCAGTTTTTG 59.029 43.478 0.00 0.00 0.00 2.44
2334 2442 0.179150 TCGTGTGCAGTTTTTGGTGC 60.179 50.000 0.00 0.00 40.29 5.01
2343 2451 3.374745 CAGTTTTTGGTGCACAAGCTAG 58.625 45.455 20.43 3.81 40.82 3.42
2578 2692 1.086696 CCATCAGCCAAAGTACCACG 58.913 55.000 0.00 0.00 0.00 4.94
2718 3214 0.983467 TCAGGTATGCCACAGCTTGA 59.017 50.000 1.54 0.00 40.80 3.02
2895 3391 0.811616 GAGGGTGGATGTGCGTGATC 60.812 60.000 0.00 0.00 0.00 2.92
2897 3393 1.091771 GGGTGGATGTGCGTGATCTG 61.092 60.000 0.00 0.00 0.00 2.90
2954 3450 2.689471 CAAGCATAATAGCCAGGTGCAA 59.311 45.455 0.00 0.00 44.83 4.08
2955 3451 2.579873 AGCATAATAGCCAGGTGCAAG 58.420 47.619 0.00 0.00 44.83 4.01
2956 3452 2.092212 AGCATAATAGCCAGGTGCAAGT 60.092 45.455 0.00 0.00 44.83 3.16
3016 3513 1.588824 TTTGGCAGCAGCTTCGGATG 61.589 55.000 0.00 0.00 41.70 3.51
3141 3638 2.614229 GGCCTTGTGTTTTGGTTGTGTT 60.614 45.455 0.00 0.00 0.00 3.32
3234 3731 6.038936 TGTTTGAACTAACCTTAGGCAAGTTC 59.961 38.462 26.45 26.45 42.79 3.01
3249 3746 4.453136 GGCAAGTTCGGTAAGAAATGTGTA 59.547 41.667 0.00 0.00 41.10 2.90
3353 3850 5.185056 TGACCACGGATGATATCGATATGTT 59.815 40.000 22.37 9.28 0.00 2.71
3411 3908 2.409152 TTTTTCCCTTTTGCTACGCG 57.591 45.000 3.53 3.53 0.00 6.01
3417 3914 1.683790 CCTTTTGCTACGCGTCCTCG 61.684 60.000 18.63 3.97 40.37 4.63
3516 4013 2.104963 GCTTGATTAGGGACTCGGGAAT 59.895 50.000 0.00 0.00 41.75 3.01
3602 4099 1.535028 CAGCGCGCCATATTATTCCAA 59.465 47.619 30.33 0.00 0.00 3.53
3675 4172 1.816835 AGCCTTCATCGACAAGTACGA 59.183 47.619 0.00 0.00 43.65 3.43
3792 4295 5.471797 TGGTTTTGACACGTGATATGTTCAT 59.528 36.000 25.01 0.00 36.54 2.57
3958 4461 2.437281 CAGGAAGGAGAGCACCATGTAT 59.563 50.000 0.00 0.00 0.00 2.29
3964 4467 3.117169 AGGAGAGCACCATGTATCTCTCT 60.117 47.826 23.06 13.80 46.49 3.10
4066 4569 2.092914 GCCTGTAGTAGCCTCAATGGTT 60.093 50.000 0.00 0.00 38.35 3.67
4122 4626 4.641989 CCTAATCCCTCAAACTCCAATGTG 59.358 45.833 0.00 0.00 0.00 3.21
4133 4637 2.224426 ACTCCAATGTGACCGTTAGCAA 60.224 45.455 0.00 0.00 0.00 3.91
4180 4684 4.070716 GGGCCTGATCTTATCATCTGTTG 58.929 47.826 0.84 0.00 38.85 3.33
4235 4739 8.865090 AGCTAGATATTGTATCACAGCTTAACT 58.135 33.333 14.94 0.00 36.15 2.24
4236 4740 9.482627 GCTAGATATTGTATCACAGCTTAACTT 57.517 33.333 0.00 0.00 0.00 2.66
4284 4788 3.346315 CCATCTGCATTCCAGTGTTGTA 58.654 45.455 0.00 0.00 42.38 2.41
4324 4829 5.127356 AGTGCTGTAACTTCTGTCTATACCC 59.873 44.000 0.00 0.00 0.00 3.69
4348 4853 5.630121 TCTGGTTCATGGTATGTGAAAAGT 58.370 37.500 0.00 0.00 37.34 2.66
4439 4944 4.175337 ACGCCACTGCCTGTGTGT 62.175 61.111 0.91 0.00 44.81 3.72
4463 4968 8.615211 TGTCATTATTGCTTCTATGCTTTGTAG 58.385 33.333 0.00 0.00 0.00 2.74
4464 4969 8.616076 GTCATTATTGCTTCTATGCTTTGTAGT 58.384 33.333 0.00 0.00 0.00 2.73
4465 4970 9.830975 TCATTATTGCTTCTATGCTTTGTAGTA 57.169 29.630 0.00 0.00 0.00 1.82
4570 5076 1.615392 GTTCTCCAATGCTTGCCAACT 59.385 47.619 0.00 0.00 0.00 3.16
4619 5125 4.463050 TGTGTTTTAGGGACAGGGATTT 57.537 40.909 0.00 0.00 0.00 2.17
4708 5214 9.177608 TCTAATGGACAAGATTGGTCTAAATTG 57.822 33.333 0.00 0.00 35.61 2.32
4763 5269 9.851686 AAATTCAGCTAAGTCATATATGTTCCA 57.148 29.630 12.42 0.00 0.00 3.53
4766 5272 8.837788 TCAGCTAAGTCATATATGTTCCATTG 57.162 34.615 12.42 5.37 0.00 2.82
4767 5273 8.650490 TCAGCTAAGTCATATATGTTCCATTGA 58.350 33.333 12.42 7.29 0.00 2.57
4768 5274 9.276590 CAGCTAAGTCATATATGTTCCATTGAA 57.723 33.333 12.42 0.00 0.00 2.69
4780 5286 7.976414 ATGTTCCATTGAATATTCTGGGAAA 57.024 32.000 24.59 14.14 35.12 3.13
4781 5287 7.976414 TGTTCCATTGAATATTCTGGGAAAT 57.024 32.000 24.59 12.29 35.12 2.17
4782 5288 8.378115 TGTTCCATTGAATATTCTGGGAAATT 57.622 30.769 24.59 0.83 35.12 1.82
4783 5289 8.824783 TGTTCCATTGAATATTCTGGGAAATTT 58.175 29.630 24.59 0.00 35.12 1.82
4784 5290 9.671279 GTTCCATTGAATATTCTGGGAAATTTT 57.329 29.630 24.59 0.00 35.12 1.82
4785 5291 9.889128 TTCCATTGAATATTCTGGGAAATTTTC 57.111 29.630 22.51 0.24 32.55 2.29
4786 5292 8.196771 TCCATTGAATATTCTGGGAAATTTTCG 58.803 33.333 18.76 0.99 32.51 3.46
4789 6741 8.980143 TTGAATATTCTGGGAAATTTTCGTTC 57.020 30.769 16.24 0.00 32.51 3.95
4795 6747 5.537188 TCTGGGAAATTTTCGTTCCATTTG 58.463 37.500 5.61 0.00 45.49 2.32
4796 6748 4.636249 TGGGAAATTTTCGTTCCATTTGG 58.364 39.130 5.61 0.00 45.49 3.28
4798 6750 5.012561 TGGGAAATTTTCGTTCCATTTGGAT 59.987 36.000 0.00 0.00 45.49 3.41
4801 6753 7.604545 GGGAAATTTTCGTTCCATTTGGATAAA 59.395 33.333 0.00 0.00 45.49 1.40
4802 6754 9.161629 GGAAATTTTCGTTCCATTTGGATAAAT 57.838 29.630 0.00 2.81 44.98 1.40
4813 6765 6.833342 CATTTGGATAAATGGTTTAGCAGC 57.167 37.500 5.14 0.00 45.99 5.25
4816 6768 7.710676 TTTGGATAAATGGTTTAGCAGCTAA 57.289 32.000 11.07 11.07 33.38 3.09
4818 6770 7.896383 TGGATAAATGGTTTAGCAGCTAATT 57.104 32.000 15.81 9.12 33.38 1.40
4819 6771 7.715657 TGGATAAATGGTTTAGCAGCTAATTG 58.284 34.615 15.81 0.00 33.38 2.32
4820 6772 7.341769 TGGATAAATGGTTTAGCAGCTAATTGT 59.658 33.333 15.81 5.20 33.38 2.71
4821 6773 7.649306 GGATAAATGGTTTAGCAGCTAATTGTG 59.351 37.037 15.81 0.00 33.38 3.33
4822 6774 5.982890 AATGGTTTAGCAGCTAATTGTGT 57.017 34.783 15.81 0.00 0.00 3.72
4823 6775 5.982890 ATGGTTTAGCAGCTAATTGTGTT 57.017 34.783 15.81 0.00 0.00 3.32
4826 6778 5.982516 TGGTTTAGCAGCTAATTGTGTTTTG 59.017 36.000 15.81 0.00 0.00 2.44
4828 6780 6.363357 GGTTTAGCAGCTAATTGTGTTTTGAG 59.637 38.462 15.81 0.00 0.00 3.02
4829 6781 3.905784 AGCAGCTAATTGTGTTTTGAGC 58.094 40.909 0.00 0.00 0.00 4.26
4830 6782 3.571401 AGCAGCTAATTGTGTTTTGAGCT 59.429 39.130 0.00 0.00 40.82 4.09
4831 6783 4.038402 AGCAGCTAATTGTGTTTTGAGCTT 59.962 37.500 0.00 0.00 38.18 3.74
4832 6784 4.149396 GCAGCTAATTGTGTTTTGAGCTTG 59.851 41.667 0.00 0.00 38.18 4.01
4833 6785 5.522456 CAGCTAATTGTGTTTTGAGCTTGA 58.478 37.500 0.00 0.00 38.18 3.02
4834 6786 5.978919 CAGCTAATTGTGTTTTGAGCTTGAA 59.021 36.000 0.00 0.00 38.18 2.69
4835 6787 6.476380 CAGCTAATTGTGTTTTGAGCTTGAAA 59.524 34.615 0.00 0.00 38.18 2.69
4836 6788 7.170320 CAGCTAATTGTGTTTTGAGCTTGAAAT 59.830 33.333 0.00 0.00 38.18 2.17
4837 6789 8.359642 AGCTAATTGTGTTTTGAGCTTGAAATA 58.640 29.630 0.00 0.00 36.93 1.40
4838 6790 9.143631 GCTAATTGTGTTTTGAGCTTGAAATAT 57.856 29.630 0.00 0.00 0.00 1.28
4844 6796 9.255304 TGTGTTTTGAGCTTGAAATATAAAACC 57.745 29.630 0.00 0.00 36.33 3.27
4845 6797 8.708742 GTGTTTTGAGCTTGAAATATAAAACCC 58.291 33.333 0.00 0.00 36.33 4.11
4846 6798 8.646900 TGTTTTGAGCTTGAAATATAAAACCCT 58.353 29.630 0.00 0.00 36.33 4.34
4865 6817 9.470399 AAAACCCTATTTAATCATAGACCGTTT 57.530 29.630 0.00 0.00 30.10 3.60
4882 7906 7.493367 AGACCGTTTATCCAAATGAAACAAAA 58.507 30.769 0.00 0.00 33.22 2.44
4883 7907 7.982354 AGACCGTTTATCCAAATGAAACAAAAA 59.018 29.630 0.00 0.00 33.22 1.94
4903 8340 9.439500 ACAAAAATTTCACAGAATATGGAATGG 57.561 29.630 0.00 0.00 0.00 3.16
4906 8343 9.657419 AAAATTTCACAGAATATGGAATGGAAC 57.343 29.630 0.00 0.00 0.00 3.62
4925 8362 6.957631 TGGAACATGTATGACTTACCTGAAT 58.042 36.000 0.00 1.00 32.54 2.57
4926 8363 7.402054 TGGAACATGTATGACTTACCTGAATT 58.598 34.615 0.00 0.00 32.54 2.17
4928 8365 8.739972 GGAACATGTATGACTTACCTGAATTTT 58.260 33.333 0.00 0.00 32.54 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 9.847224 ACATTTAAGTCCTAGTTTTTCAAGAGA 57.153 29.630 0.00 0.00 0.00 3.10
2 3 9.884465 CACATTTAAGTCCTAGTTTTTCAAGAG 57.116 33.333 0.00 0.00 0.00 2.85
3 4 8.349983 GCACATTTAAGTCCTAGTTTTTCAAGA 58.650 33.333 0.00 0.00 0.00 3.02
4 5 8.134895 TGCACATTTAAGTCCTAGTTTTTCAAG 58.865 33.333 0.00 0.00 0.00 3.02
5 6 8.001881 TGCACATTTAAGTCCTAGTTTTTCAA 57.998 30.769 0.00 0.00 0.00 2.69
6 7 7.575414 TGCACATTTAAGTCCTAGTTTTTCA 57.425 32.000 0.00 0.00 0.00 2.69
7 8 7.542130 CCATGCACATTTAAGTCCTAGTTTTTC 59.458 37.037 0.00 0.00 0.00 2.29
8 9 7.232534 TCCATGCACATTTAAGTCCTAGTTTTT 59.767 33.333 0.00 0.00 0.00 1.94
9 10 6.719370 TCCATGCACATTTAAGTCCTAGTTTT 59.281 34.615 0.00 0.00 0.00 2.43
10 11 6.245408 TCCATGCACATTTAAGTCCTAGTTT 58.755 36.000 0.00 0.00 0.00 2.66
11 12 5.815581 TCCATGCACATTTAAGTCCTAGTT 58.184 37.500 0.00 0.00 0.00 2.24
12 13 5.435686 TCCATGCACATTTAAGTCCTAGT 57.564 39.130 0.00 0.00 0.00 2.57
13 14 6.294473 AGATCCATGCACATTTAAGTCCTAG 58.706 40.000 0.00 0.00 0.00 3.02
14 15 6.126796 TGAGATCCATGCACATTTAAGTCCTA 60.127 38.462 0.00 0.00 0.00 2.94
15 16 5.121380 AGATCCATGCACATTTAAGTCCT 57.879 39.130 0.00 0.00 0.00 3.85
16 17 4.883585 TGAGATCCATGCACATTTAAGTCC 59.116 41.667 0.00 0.00 0.00 3.85
17 18 6.436261 CATGAGATCCATGCACATTTAAGTC 58.564 40.000 10.12 0.00 45.25 3.01
18 19 6.387041 CATGAGATCCATGCACATTTAAGT 57.613 37.500 10.12 0.00 45.25 2.24
30 31 6.455647 CAAATATTTGCTGCATGAGATCCAT 58.544 36.000 14.96 0.00 35.44 3.41
31 32 5.838529 CAAATATTTGCTGCATGAGATCCA 58.161 37.500 14.96 0.00 0.00 3.41
59 60 9.936759 CCTCTCCTCTTAGTTGGATATAAAATC 57.063 37.037 0.00 0.00 0.00 2.17
60 61 8.885346 CCCTCTCCTCTTAGTTGGATATAAAAT 58.115 37.037 0.00 0.00 0.00 1.82
61 62 7.849904 ACCCTCTCCTCTTAGTTGGATATAAAA 59.150 37.037 0.00 0.00 0.00 1.52
62 63 7.371043 ACCCTCTCCTCTTAGTTGGATATAAA 58.629 38.462 0.00 0.00 0.00 1.40
63 64 6.935036 ACCCTCTCCTCTTAGTTGGATATAA 58.065 40.000 0.00 0.00 0.00 0.98
64 65 6.547396 ACCCTCTCCTCTTAGTTGGATATA 57.453 41.667 0.00 0.00 0.00 0.86
65 66 5.426325 ACCCTCTCCTCTTAGTTGGATAT 57.574 43.478 0.00 0.00 0.00 1.63
66 67 4.901785 ACCCTCTCCTCTTAGTTGGATA 57.098 45.455 0.00 0.00 0.00 2.59
67 68 3.786213 ACCCTCTCCTCTTAGTTGGAT 57.214 47.619 0.00 0.00 0.00 3.41
68 69 4.687262 TTACCCTCTCCTCTTAGTTGGA 57.313 45.455 0.00 0.00 0.00 3.53
69 70 4.962995 TGATTACCCTCTCCTCTTAGTTGG 59.037 45.833 0.00 0.00 0.00 3.77
70 71 5.163395 GGTGATTACCCTCTCCTCTTAGTTG 60.163 48.000 0.00 0.00 41.36 3.16
71 72 4.963628 GGTGATTACCCTCTCCTCTTAGTT 59.036 45.833 0.00 0.00 41.36 2.24
72 73 4.016479 TGGTGATTACCCTCTCCTCTTAGT 60.016 45.833 3.88 0.00 46.96 2.24
73 74 4.342665 GTGGTGATTACCCTCTCCTCTTAG 59.657 50.000 3.88 0.00 46.96 2.18
74 75 4.016479 AGTGGTGATTACCCTCTCCTCTTA 60.016 45.833 3.88 0.00 46.96 2.10
75 76 3.108376 GTGGTGATTACCCTCTCCTCTT 58.892 50.000 3.88 0.00 46.96 2.85
76 77 2.316372 AGTGGTGATTACCCTCTCCTCT 59.684 50.000 3.88 0.00 46.96 3.69
77 78 2.432510 CAGTGGTGATTACCCTCTCCTC 59.567 54.545 3.88 0.00 46.96 3.71
78 79 2.225650 ACAGTGGTGATTACCCTCTCCT 60.226 50.000 3.88 0.00 46.96 3.69
79 80 2.188817 ACAGTGGTGATTACCCTCTCC 58.811 52.381 3.88 0.00 46.96 3.71
92 93 7.394359 AGTTTATTTTCAGATATGCACAGTGGT 59.606 33.333 1.84 0.00 0.00 4.16
93 94 7.765307 AGTTTATTTTCAGATATGCACAGTGG 58.235 34.615 1.84 0.00 0.00 4.00
116 117 9.574516 ACAATCTCAGGTCTTTGTAAAATTAGT 57.425 29.630 0.00 0.00 30.89 2.24
119 120 9.574516 AGTACAATCTCAGGTCTTTGTAAAATT 57.425 29.630 0.00 0.00 36.59 1.82
120 121 9.003658 CAGTACAATCTCAGGTCTTTGTAAAAT 57.996 33.333 0.00 0.00 36.59 1.82
121 122 7.041372 GCAGTACAATCTCAGGTCTTTGTAAAA 60.041 37.037 0.00 0.00 36.59 1.52
122 123 6.426937 GCAGTACAATCTCAGGTCTTTGTAAA 59.573 38.462 0.00 0.00 36.59 2.01
123 124 5.932303 GCAGTACAATCTCAGGTCTTTGTAA 59.068 40.000 0.00 0.00 36.59 2.41
124 125 5.011635 TGCAGTACAATCTCAGGTCTTTGTA 59.988 40.000 0.00 0.00 34.39 2.41
125 126 4.202357 TGCAGTACAATCTCAGGTCTTTGT 60.202 41.667 0.00 0.00 36.37 2.83
126 127 4.318332 TGCAGTACAATCTCAGGTCTTTG 58.682 43.478 0.00 0.00 0.00 2.77
127 128 4.623932 TGCAGTACAATCTCAGGTCTTT 57.376 40.909 0.00 0.00 0.00 2.52
128 129 4.623932 TTGCAGTACAATCTCAGGTCTT 57.376 40.909 0.00 0.00 31.73 3.01
129 130 4.623932 TTTGCAGTACAATCTCAGGTCT 57.376 40.909 0.00 0.00 38.31 3.85
130 131 4.997395 TCTTTTGCAGTACAATCTCAGGTC 59.003 41.667 0.00 0.00 38.31 3.85
131 132 4.973168 TCTTTTGCAGTACAATCTCAGGT 58.027 39.130 0.00 0.00 38.31 4.00
132 133 4.142730 GCTCTTTTGCAGTACAATCTCAGG 60.143 45.833 0.00 0.00 38.31 3.86
133 134 4.453478 TGCTCTTTTGCAGTACAATCTCAG 59.547 41.667 0.00 0.00 38.31 3.35
134 135 4.388485 TGCTCTTTTGCAGTACAATCTCA 58.612 39.130 0.00 0.00 38.31 3.27
145 146 2.031769 CGTTGATGACTGCTCTTTTGCA 60.032 45.455 0.00 0.00 41.05 4.08
146 147 2.578495 CGTTGATGACTGCTCTTTTGC 58.422 47.619 0.00 0.00 0.00 3.68
147 148 2.225019 AGCGTTGATGACTGCTCTTTTG 59.775 45.455 0.00 0.00 34.56 2.44
148 149 2.225019 CAGCGTTGATGACTGCTCTTTT 59.775 45.455 0.00 0.00 36.47 2.27
149 150 1.802960 CAGCGTTGATGACTGCTCTTT 59.197 47.619 0.00 0.00 36.47 2.52
150 151 1.436600 CAGCGTTGATGACTGCTCTT 58.563 50.000 0.00 0.00 36.47 2.85
151 152 3.134401 CAGCGTTGATGACTGCTCT 57.866 52.632 0.00 0.00 36.47 4.09
155 156 1.792301 CTGGCAGCGTTGATGACTG 59.208 57.895 2.38 0.00 34.48 3.51
156 157 2.037136 GCTGGCAGCGTTGATGACT 61.037 57.895 25.47 0.00 0.00 3.41
157 158 2.482374 GCTGGCAGCGTTGATGAC 59.518 61.111 25.47 0.00 0.00 3.06
166 167 2.751806 ACTATTCTTCAAAGCTGGCAGC 59.248 45.455 31.56 31.56 42.84 5.25
167 168 3.063180 CGACTATTCTTCAAAGCTGGCAG 59.937 47.826 10.94 10.94 0.00 4.85
168 169 3.002791 CGACTATTCTTCAAAGCTGGCA 58.997 45.455 0.00 0.00 0.00 4.92
169 170 3.003480 ACGACTATTCTTCAAAGCTGGC 58.997 45.455 0.00 0.00 0.00 4.85
170 171 6.910536 AATACGACTATTCTTCAAAGCTGG 57.089 37.500 0.00 0.00 0.00 4.85
171 172 7.491372 TGGTAATACGACTATTCTTCAAAGCTG 59.509 37.037 0.00 0.00 0.00 4.24
172 173 7.553334 TGGTAATACGACTATTCTTCAAAGCT 58.447 34.615 0.00 0.00 0.00 3.74
173 174 7.766219 TGGTAATACGACTATTCTTCAAAGC 57.234 36.000 0.00 0.00 0.00 3.51
174 175 8.818057 CCTTGGTAATACGACTATTCTTCAAAG 58.182 37.037 0.00 0.00 0.00 2.77
175 176 8.533657 TCCTTGGTAATACGACTATTCTTCAAA 58.466 33.333 0.00 0.00 0.00 2.69
176 177 7.977853 GTCCTTGGTAATACGACTATTCTTCAA 59.022 37.037 0.00 0.00 0.00 2.69
177 178 7.123098 TGTCCTTGGTAATACGACTATTCTTCA 59.877 37.037 0.00 0.00 0.00 3.02
178 179 7.486647 TGTCCTTGGTAATACGACTATTCTTC 58.513 38.462 0.00 0.00 0.00 2.87
179 180 7.414222 TGTCCTTGGTAATACGACTATTCTT 57.586 36.000 0.00 0.00 0.00 2.52
180 181 7.414222 TTGTCCTTGGTAATACGACTATTCT 57.586 36.000 0.00 0.00 0.00 2.40
181 182 8.385858 GTTTTGTCCTTGGTAATACGACTATTC 58.614 37.037 0.00 0.00 0.00 1.75
182 183 7.063780 CGTTTTGTCCTTGGTAATACGACTATT 59.936 37.037 12.51 0.00 32.91 1.73
183 184 6.532657 CGTTTTGTCCTTGGTAATACGACTAT 59.467 38.462 12.51 0.00 32.91 2.12
184 185 5.863397 CGTTTTGTCCTTGGTAATACGACTA 59.137 40.000 12.51 0.00 32.91 2.59
185 186 4.687483 CGTTTTGTCCTTGGTAATACGACT 59.313 41.667 12.51 0.00 32.91 4.18
186 187 4.685628 TCGTTTTGTCCTTGGTAATACGAC 59.314 41.667 14.66 0.00 34.53 4.34
187 188 4.880759 TCGTTTTGTCCTTGGTAATACGA 58.119 39.130 14.66 14.66 36.15 3.43
188 189 5.789710 ATCGTTTTGTCCTTGGTAATACG 57.210 39.130 12.03 12.03 32.60 3.06
189 190 6.149807 TCCAATCGTTTTGTCCTTGGTAATAC 59.850 38.462 0.00 0.00 38.02 1.89
190 191 6.239396 TCCAATCGTTTTGTCCTTGGTAATA 58.761 36.000 0.00 0.00 38.02 0.98
191 192 5.074115 TCCAATCGTTTTGTCCTTGGTAAT 58.926 37.500 0.00 0.00 38.02 1.89
192 193 4.462133 TCCAATCGTTTTGTCCTTGGTAA 58.538 39.130 0.00 0.00 38.02 2.85
193 194 4.088056 TCCAATCGTTTTGTCCTTGGTA 57.912 40.909 0.00 0.00 38.02 3.25
194 195 2.938838 TCCAATCGTTTTGTCCTTGGT 58.061 42.857 0.00 0.00 38.02 3.67
195 196 5.356751 TCATATCCAATCGTTTTGTCCTTGG 59.643 40.000 0.00 0.00 38.14 3.61
196 197 6.435430 TCATATCCAATCGTTTTGTCCTTG 57.565 37.500 1.37 0.00 0.00 3.61
197 198 5.590259 CCTCATATCCAATCGTTTTGTCCTT 59.410 40.000 1.37 0.00 0.00 3.36
198 199 5.104527 TCCTCATATCCAATCGTTTTGTCCT 60.105 40.000 1.37 0.00 0.00 3.85
199 200 5.123227 TCCTCATATCCAATCGTTTTGTCC 58.877 41.667 1.37 0.00 0.00 4.02
200 201 6.316390 ACTTCCTCATATCCAATCGTTTTGTC 59.684 38.462 1.37 0.00 0.00 3.18
201 202 6.180472 ACTTCCTCATATCCAATCGTTTTGT 58.820 36.000 1.37 0.00 0.00 2.83
202 203 6.510157 CGACTTCCTCATATCCAATCGTTTTG 60.510 42.308 0.00 0.00 0.00 2.44
203 204 5.523916 CGACTTCCTCATATCCAATCGTTTT 59.476 40.000 0.00 0.00 0.00 2.43
204 205 5.050490 CGACTTCCTCATATCCAATCGTTT 58.950 41.667 0.00 0.00 0.00 3.60
205 206 4.341235 TCGACTTCCTCATATCCAATCGTT 59.659 41.667 0.00 0.00 0.00 3.85
206 207 3.889538 TCGACTTCCTCATATCCAATCGT 59.110 43.478 0.00 0.00 0.00 3.73
207 208 4.480541 CTCGACTTCCTCATATCCAATCG 58.519 47.826 0.00 0.00 0.00 3.34
208 209 4.282195 ACCTCGACTTCCTCATATCCAATC 59.718 45.833 0.00 0.00 0.00 2.67
209 210 4.039730 CACCTCGACTTCCTCATATCCAAT 59.960 45.833 0.00 0.00 0.00 3.16
210 211 3.384789 CACCTCGACTTCCTCATATCCAA 59.615 47.826 0.00 0.00 0.00 3.53
211 212 2.959030 CACCTCGACTTCCTCATATCCA 59.041 50.000 0.00 0.00 0.00 3.41
212 213 2.297597 CCACCTCGACTTCCTCATATCC 59.702 54.545 0.00 0.00 0.00 2.59
213 214 2.959707 ACCACCTCGACTTCCTCATATC 59.040 50.000 0.00 0.00 0.00 1.63
214 215 3.033659 ACCACCTCGACTTCCTCATAT 57.966 47.619 0.00 0.00 0.00 1.78
215 216 2.526888 ACCACCTCGACTTCCTCATA 57.473 50.000 0.00 0.00 0.00 2.15
216 217 1.645710 AACCACCTCGACTTCCTCAT 58.354 50.000 0.00 0.00 0.00 2.90
217 218 2.297698 TAACCACCTCGACTTCCTCA 57.702 50.000 0.00 0.00 0.00 3.86
218 219 3.522553 CAATAACCACCTCGACTTCCTC 58.477 50.000 0.00 0.00 0.00 3.71
219 220 2.354805 GCAATAACCACCTCGACTTCCT 60.355 50.000 0.00 0.00 0.00 3.36
220 221 2.007608 GCAATAACCACCTCGACTTCC 58.992 52.381 0.00 0.00 0.00 3.46
221 222 2.695359 TGCAATAACCACCTCGACTTC 58.305 47.619 0.00 0.00 0.00 3.01
222 223 2.851263 TGCAATAACCACCTCGACTT 57.149 45.000 0.00 0.00 0.00 3.01
223 224 2.851263 TTGCAATAACCACCTCGACT 57.149 45.000 0.00 0.00 0.00 4.18
224 225 3.252458 ACTTTTGCAATAACCACCTCGAC 59.748 43.478 0.00 0.00 0.00 4.20
225 226 3.482436 ACTTTTGCAATAACCACCTCGA 58.518 40.909 0.00 0.00 0.00 4.04
226 227 3.252215 TGACTTTTGCAATAACCACCTCG 59.748 43.478 0.00 0.00 0.00 4.63
227 228 4.846779 TGACTTTTGCAATAACCACCTC 57.153 40.909 0.00 0.00 0.00 3.85
228 229 4.649218 ACTTGACTTTTGCAATAACCACCT 59.351 37.500 0.00 0.00 0.00 4.00
229 230 4.944048 ACTTGACTTTTGCAATAACCACC 58.056 39.130 0.00 0.00 0.00 4.61
230 231 6.902224 AAACTTGACTTTTGCAATAACCAC 57.098 33.333 0.00 0.00 0.00 4.16
238 239 9.820229 CGTTAGATATAAAACTTGACTTTTGCA 57.180 29.630 0.00 0.00 0.00 4.08
249 250 8.804204 CCCCTGATACTCGTTAGATATAAAACT 58.196 37.037 0.00 0.00 0.00 2.66
250 251 8.033626 CCCCCTGATACTCGTTAGATATAAAAC 58.966 40.741 0.00 0.00 0.00 2.43
251 252 8.130671 CCCCCTGATACTCGTTAGATATAAAA 57.869 38.462 0.00 0.00 0.00 1.52
252 253 7.713734 CCCCCTGATACTCGTTAGATATAAA 57.286 40.000 0.00 0.00 0.00 1.40
273 274 2.885894 TGTACATTTCACGAAAACCCCC 59.114 45.455 0.00 0.00 33.56 5.40
274 275 4.776795 ATGTACATTTCACGAAAACCCC 57.223 40.909 1.41 0.00 33.56 4.95
275 276 7.325097 CACTTAATGTACATTTCACGAAAACCC 59.675 37.037 25.31 0.00 33.56 4.11
276 277 7.325097 CCACTTAATGTACATTTCACGAAAACC 59.675 37.037 25.31 0.00 33.56 3.27
277 278 7.149031 GCCACTTAATGTACATTTCACGAAAAC 60.149 37.037 25.31 5.17 33.56 2.43
278 279 6.858993 GCCACTTAATGTACATTTCACGAAAA 59.141 34.615 25.31 11.21 33.56 2.29
279 280 6.375377 GCCACTTAATGTACATTTCACGAAA 58.625 36.000 25.31 11.87 32.50 3.46
280 281 5.106475 GGCCACTTAATGTACATTTCACGAA 60.106 40.000 25.31 12.54 32.50 3.85
281 282 4.393680 GGCCACTTAATGTACATTTCACGA 59.606 41.667 25.31 5.17 32.50 4.35
282 283 4.394920 AGGCCACTTAATGTACATTTCACG 59.605 41.667 25.31 13.58 32.50 4.35
283 284 5.414454 TCAGGCCACTTAATGTACATTTCAC 59.586 40.000 25.31 9.97 32.50 3.18
284 285 5.565509 TCAGGCCACTTAATGTACATTTCA 58.434 37.500 25.31 12.26 32.50 2.69
285 286 5.066505 CCTCAGGCCACTTAATGTACATTTC 59.933 44.000 25.31 8.69 32.50 2.17
286 287 4.949856 CCTCAGGCCACTTAATGTACATTT 59.050 41.667 25.31 5.93 32.50 2.32
287 288 4.018415 ACCTCAGGCCACTTAATGTACATT 60.018 41.667 23.80 23.80 34.93 2.71
288 289 3.523564 ACCTCAGGCCACTTAATGTACAT 59.476 43.478 5.01 1.41 0.00 2.29
289 290 2.910319 ACCTCAGGCCACTTAATGTACA 59.090 45.455 5.01 0.00 0.00 2.90
290 291 3.270877 CACCTCAGGCCACTTAATGTAC 58.729 50.000 5.01 0.00 0.00 2.90
291 292 2.355716 GCACCTCAGGCCACTTAATGTA 60.356 50.000 5.01 0.00 0.00 2.29
292 293 1.614317 GCACCTCAGGCCACTTAATGT 60.614 52.381 5.01 0.00 0.00 2.71
293 294 1.098050 GCACCTCAGGCCACTTAATG 58.902 55.000 5.01 0.00 0.00 1.90
294 295 0.995024 AGCACCTCAGGCCACTTAAT 59.005 50.000 5.01 0.00 0.00 1.40
295 296 0.771127 AAGCACCTCAGGCCACTTAA 59.229 50.000 5.01 0.00 0.00 1.85
296 297 0.324943 GAAGCACCTCAGGCCACTTA 59.675 55.000 5.01 0.00 0.00 2.24
297 298 1.073897 GAAGCACCTCAGGCCACTT 59.926 57.895 5.01 0.00 0.00 3.16
298 299 2.149383 TGAAGCACCTCAGGCCACT 61.149 57.895 5.01 0.00 0.00 4.00
299 300 1.968540 GTGAAGCACCTCAGGCCAC 60.969 63.158 5.01 0.00 0.00 5.01
300 301 0.835971 TAGTGAAGCACCTCAGGCCA 60.836 55.000 5.01 0.00 34.49 5.36
301 302 0.107945 CTAGTGAAGCACCTCAGGCC 60.108 60.000 0.00 0.00 34.49 5.19
302 303 0.898320 TCTAGTGAAGCACCTCAGGC 59.102 55.000 0.00 0.00 34.49 4.85
303 304 3.196469 TGATTCTAGTGAAGCACCTCAGG 59.804 47.826 0.00 0.00 42.72 3.86
304 305 4.159321 TCTGATTCTAGTGAAGCACCTCAG 59.841 45.833 0.00 0.00 42.72 3.35
305 306 4.089361 TCTGATTCTAGTGAAGCACCTCA 58.911 43.478 0.00 0.00 42.72 3.86
306 307 4.681744 CTCTGATTCTAGTGAAGCACCTC 58.318 47.826 0.00 0.00 42.72 3.85
307 308 3.118811 GCTCTGATTCTAGTGAAGCACCT 60.119 47.826 0.00 0.00 42.72 4.00
308 309 3.194062 GCTCTGATTCTAGTGAAGCACC 58.806 50.000 0.00 0.00 42.72 5.01
309 310 3.194062 GGCTCTGATTCTAGTGAAGCAC 58.806 50.000 0.00 0.00 42.72 4.40
310 311 2.833943 TGGCTCTGATTCTAGTGAAGCA 59.166 45.455 0.00 0.00 44.96 3.91
311 312 3.533606 TGGCTCTGATTCTAGTGAAGC 57.466 47.619 0.00 0.00 38.90 3.86
312 313 6.154203 TGTATGGCTCTGATTCTAGTGAAG 57.846 41.667 0.00 0.00 35.44 3.02
313 314 6.737720 ATGTATGGCTCTGATTCTAGTGAA 57.262 37.500 0.00 0.00 36.54 3.18
314 315 6.209589 GGTATGTATGGCTCTGATTCTAGTGA 59.790 42.308 0.00 0.00 0.00 3.41
315 316 6.210385 AGGTATGTATGGCTCTGATTCTAGTG 59.790 42.308 0.00 0.00 0.00 2.74
316 317 6.210385 CAGGTATGTATGGCTCTGATTCTAGT 59.790 42.308 0.00 0.00 0.00 2.57
317 318 6.435591 TCAGGTATGTATGGCTCTGATTCTAG 59.564 42.308 0.00 0.00 0.00 2.43
318 319 6.314917 TCAGGTATGTATGGCTCTGATTCTA 58.685 40.000 0.00 0.00 0.00 2.10
319 320 5.150715 TCAGGTATGTATGGCTCTGATTCT 58.849 41.667 0.00 0.00 0.00 2.40
320 321 5.474578 TCAGGTATGTATGGCTCTGATTC 57.525 43.478 0.00 0.00 0.00 2.52
321 322 5.784390 AGATCAGGTATGTATGGCTCTGATT 59.216 40.000 0.00 0.00 40.64 2.57
322 323 5.187381 CAGATCAGGTATGTATGGCTCTGAT 59.813 44.000 0.00 0.00 42.46 2.90
323 324 4.525874 CAGATCAGGTATGTATGGCTCTGA 59.474 45.833 0.00 0.00 36.00 3.27
324 325 4.525874 TCAGATCAGGTATGTATGGCTCTG 59.474 45.833 0.00 0.00 32.51 3.35
325 326 4.745351 TCAGATCAGGTATGTATGGCTCT 58.255 43.478 0.00 0.00 0.00 4.09
326 327 5.417811 CATCAGATCAGGTATGTATGGCTC 58.582 45.833 0.00 0.00 0.00 4.70
327 328 4.224594 CCATCAGATCAGGTATGTATGGCT 59.775 45.833 0.00 0.00 0.00 4.75
328 329 4.511527 CCATCAGATCAGGTATGTATGGC 58.488 47.826 0.00 0.00 0.00 4.40
329 330 4.511527 GCCATCAGATCAGGTATGTATGG 58.488 47.826 0.00 0.00 33.56 2.74
330 331 4.511527 GGCCATCAGATCAGGTATGTATG 58.488 47.826 0.00 0.00 0.00 2.39
331 332 3.521126 GGGCCATCAGATCAGGTATGTAT 59.479 47.826 4.39 0.00 0.00 2.29
332 333 2.906389 GGGCCATCAGATCAGGTATGTA 59.094 50.000 4.39 0.00 0.00 2.29
333 334 1.701847 GGGCCATCAGATCAGGTATGT 59.298 52.381 4.39 0.00 0.00 2.29
334 335 1.701292 TGGGCCATCAGATCAGGTATG 59.299 52.381 0.00 0.00 0.00 2.39
335 336 2.123018 TGGGCCATCAGATCAGGTAT 57.877 50.000 0.00 0.00 0.00 2.73
336 337 2.123018 ATGGGCCATCAGATCAGGTA 57.877 50.000 14.78 0.00 0.00 3.08
337 338 2.123018 TATGGGCCATCAGATCAGGT 57.877 50.000 25.07 0.00 0.00 4.00
338 339 3.009805 TGAATATGGGCCATCAGATCAGG 59.990 47.826 25.07 0.00 0.00 3.86
339 340 4.296621 TGAATATGGGCCATCAGATCAG 57.703 45.455 25.07 0.00 0.00 2.90
340 341 4.940468 ATGAATATGGGCCATCAGATCA 57.060 40.909 25.07 21.35 0.00 2.92
341 342 6.600882 AAAATGAATATGGGCCATCAGATC 57.399 37.500 25.07 16.62 0.00 2.75
342 343 6.785963 AGAAAAATGAATATGGGCCATCAGAT 59.214 34.615 25.07 8.56 0.00 2.90
343 344 6.138263 AGAAAAATGAATATGGGCCATCAGA 58.862 36.000 25.07 6.02 0.00 3.27
344 345 6.415206 AGAAAAATGAATATGGGCCATCAG 57.585 37.500 25.07 0.00 0.00 2.90
345 346 8.495160 AATAGAAAAATGAATATGGGCCATCA 57.505 30.769 25.07 17.02 0.00 3.07
346 347 9.783081 AAAATAGAAAAATGAATATGGGCCATC 57.217 29.630 25.07 10.86 0.00 3.51
348 349 9.393512 CAAAAATAGAAAAATGAATATGGGCCA 57.606 29.630 9.61 9.61 0.00 5.36
349 350 9.394767 ACAAAAATAGAAAAATGAATATGGGCC 57.605 29.630 0.00 0.00 0.00 5.80
370 371 9.817809 GATAGAATCTGGACATGTAGTACAAAA 57.182 33.333 7.16 0.00 41.60 2.44
371 372 8.421784 GGATAGAATCTGGACATGTAGTACAAA 58.578 37.037 7.16 0.00 41.60 2.83
372 373 7.785028 AGGATAGAATCTGGACATGTAGTACAA 59.215 37.037 7.16 0.00 41.60 2.41
373 374 7.298374 AGGATAGAATCTGGACATGTAGTACA 58.702 38.462 5.24 5.24 39.29 2.90
374 375 7.768807 AGGATAGAATCTGGACATGTAGTAC 57.231 40.000 0.00 0.00 0.00 2.73
375 376 8.670490 ACTAGGATAGAATCTGGACATGTAGTA 58.330 37.037 0.00 0.00 42.77 1.82
376 377 7.531317 ACTAGGATAGAATCTGGACATGTAGT 58.469 38.462 0.00 0.00 42.77 2.73
377 378 8.303156 CAACTAGGATAGAATCTGGACATGTAG 58.697 40.741 0.00 0.00 42.77 2.74
378 379 7.255977 GCAACTAGGATAGAATCTGGACATGTA 60.256 40.741 0.00 0.00 42.77 2.29
379 380 6.463614 GCAACTAGGATAGAATCTGGACATGT 60.464 42.308 0.00 0.00 42.77 3.21
380 381 5.931146 GCAACTAGGATAGAATCTGGACATG 59.069 44.000 0.00 0.00 42.77 3.21
381 382 5.843421 AGCAACTAGGATAGAATCTGGACAT 59.157 40.000 0.00 0.00 42.77 3.06
382 383 5.211973 AGCAACTAGGATAGAATCTGGACA 58.788 41.667 0.00 0.00 42.77 4.02
383 384 5.799827 AGCAACTAGGATAGAATCTGGAC 57.200 43.478 0.00 0.00 42.77 4.02
384 385 6.384015 TGAAAGCAACTAGGATAGAATCTGGA 59.616 38.462 0.00 0.00 42.77 3.86
385 386 6.481644 GTGAAAGCAACTAGGATAGAATCTGG 59.518 42.308 0.00 0.00 42.77 3.86
386 387 7.044181 TGTGAAAGCAACTAGGATAGAATCTG 58.956 38.462 0.00 0.00 42.77 2.90
387 388 7.187824 TGTGAAAGCAACTAGGATAGAATCT 57.812 36.000 0.00 0.00 42.77 2.40
388 389 7.712639 TCATGTGAAAGCAACTAGGATAGAATC 59.287 37.037 0.00 0.00 42.77 2.52
389 390 7.568349 TCATGTGAAAGCAACTAGGATAGAAT 58.432 34.615 0.00 0.00 42.77 2.40
390 391 6.946340 TCATGTGAAAGCAACTAGGATAGAA 58.054 36.000 0.00 0.00 42.77 2.10
391 392 6.544928 TCATGTGAAAGCAACTAGGATAGA 57.455 37.500 0.00 0.00 42.77 1.98
392 393 7.798596 AATCATGTGAAAGCAACTAGGATAG 57.201 36.000 0.00 0.00 46.50 2.08
393 394 7.715249 GGTAATCATGTGAAAGCAACTAGGATA 59.285 37.037 0.00 0.00 0.00 2.59
394 395 6.543831 GGTAATCATGTGAAAGCAACTAGGAT 59.456 38.462 0.00 0.00 0.00 3.24
395 396 5.880332 GGTAATCATGTGAAAGCAACTAGGA 59.120 40.000 0.00 0.00 0.00 2.94
396 397 5.882557 AGGTAATCATGTGAAAGCAACTAGG 59.117 40.000 0.00 0.00 0.00 3.02
397 398 6.183360 CCAGGTAATCATGTGAAAGCAACTAG 60.183 42.308 0.00 0.00 0.00 2.57
398 399 5.647658 CCAGGTAATCATGTGAAAGCAACTA 59.352 40.000 0.00 0.00 0.00 2.24
399 400 4.460382 CCAGGTAATCATGTGAAAGCAACT 59.540 41.667 0.00 0.00 0.00 3.16
400 401 4.380867 CCCAGGTAATCATGTGAAAGCAAC 60.381 45.833 0.00 0.00 0.00 4.17
401 402 3.763360 CCCAGGTAATCATGTGAAAGCAA 59.237 43.478 0.00 0.00 0.00 3.91
402 403 3.245229 ACCCAGGTAATCATGTGAAAGCA 60.245 43.478 0.00 0.00 0.00 3.91
403 404 3.356290 ACCCAGGTAATCATGTGAAAGC 58.644 45.455 0.00 0.00 0.00 3.51
404 405 4.881850 GGTACCCAGGTAATCATGTGAAAG 59.118 45.833 0.00 0.00 31.86 2.62
405 406 4.289934 TGGTACCCAGGTAATCATGTGAAA 59.710 41.667 10.07 0.00 31.86 2.69
406 407 3.847184 TGGTACCCAGGTAATCATGTGAA 59.153 43.478 10.07 0.00 31.86 3.18
407 408 3.199071 GTGGTACCCAGGTAATCATGTGA 59.801 47.826 10.07 0.00 32.34 3.58
408 409 3.541632 GTGGTACCCAGGTAATCATGTG 58.458 50.000 10.07 0.00 32.34 3.21
409 410 2.169769 CGTGGTACCCAGGTAATCATGT 59.830 50.000 10.07 0.00 35.03 3.21
410 411 2.833794 CGTGGTACCCAGGTAATCATG 58.166 52.381 10.07 2.77 35.03 3.07
418 419 2.349755 CCCAACGTGGTACCCAGG 59.650 66.667 10.07 6.01 44.01 4.45
419 420 2.359478 GCCCAACGTGGTACCCAG 60.359 66.667 10.07 5.77 35.17 4.45
420 421 4.317444 CGCCCAACGTGGTACCCA 62.317 66.667 10.07 0.00 35.17 4.51
428 429 2.975799 AAATCACGCGCCCAACGT 60.976 55.556 5.73 0.00 46.42 3.99
430 431 1.007849 AACAAATCACGCGCCCAAC 60.008 52.632 5.73 0.00 0.00 3.77
431 432 1.007964 CAACAAATCACGCGCCCAA 60.008 52.632 5.73 0.00 0.00 4.12
432 433 2.642129 CAACAAATCACGCGCCCA 59.358 55.556 5.73 0.00 0.00 5.36
433 434 2.126502 CCAACAAATCACGCGCCC 60.127 61.111 5.73 0.00 0.00 6.13
434 435 2.747507 AAGCCAACAAATCACGCGCC 62.748 55.000 5.73 0.00 0.00 6.53
435 436 1.371635 AAGCCAACAAATCACGCGC 60.372 52.632 5.73 0.00 0.00 6.86
436 437 1.003262 CCAAGCCAACAAATCACGCG 61.003 55.000 3.53 3.53 0.00 6.01
437 438 1.284297 GCCAAGCCAACAAATCACGC 61.284 55.000 0.00 0.00 0.00 5.34
438 439 1.003262 CGCCAAGCCAACAAATCACG 61.003 55.000 0.00 0.00 0.00 4.35
439 440 1.284297 GCGCCAAGCCAACAAATCAC 61.284 55.000 0.00 0.00 40.81 3.06
440 441 1.006337 GCGCCAAGCCAACAAATCA 60.006 52.632 0.00 0.00 40.81 2.57
441 442 2.088178 CGCGCCAAGCCAACAAATC 61.088 57.895 0.00 0.00 44.76 2.17
442 443 2.049248 CGCGCCAAGCCAACAAAT 60.049 55.556 0.00 0.00 44.76 2.32
443 444 4.940593 GCGCGCCAAGCCAACAAA 62.941 61.111 23.24 0.00 44.76 2.83
450 451 4.705519 AACACATGCGCGCCAAGC 62.706 61.111 30.77 0.00 43.95 4.01
451 452 2.801996 CAACACATGCGCGCCAAG 60.802 61.111 30.77 20.33 0.00 3.61
452 453 4.998024 GCAACACATGCGCGCCAA 62.998 61.111 30.77 11.98 46.87 4.52
460 461 2.234661 TCTCCCTCAGTAGCAACACATG 59.765 50.000 0.00 0.00 0.00 3.21
461 462 2.499289 CTCTCCCTCAGTAGCAACACAT 59.501 50.000 0.00 0.00 0.00 3.21
462 463 1.895798 CTCTCCCTCAGTAGCAACACA 59.104 52.381 0.00 0.00 0.00 3.72
463 464 2.171840 TCTCTCCCTCAGTAGCAACAC 58.828 52.381 0.00 0.00 0.00 3.32
464 465 2.604912 TCTCTCCCTCAGTAGCAACA 57.395 50.000 0.00 0.00 0.00 3.33
465 466 4.479786 AAATCTCTCCCTCAGTAGCAAC 57.520 45.455 0.00 0.00 0.00 4.17
466 467 4.780021 AGAAAATCTCTCCCTCAGTAGCAA 59.220 41.667 0.00 0.00 0.00 3.91
467 468 4.357325 AGAAAATCTCTCCCTCAGTAGCA 58.643 43.478 0.00 0.00 0.00 3.49
468 469 5.351948 AAGAAAATCTCTCCCTCAGTAGC 57.648 43.478 0.00 0.00 31.02 3.58
469 470 9.323985 CATAAAAGAAAATCTCTCCCTCAGTAG 57.676 37.037 0.00 0.00 31.02 2.57
470 471 8.267894 CCATAAAAGAAAATCTCTCCCTCAGTA 58.732 37.037 0.00 0.00 31.02 2.74
471 472 7.115414 CCATAAAAGAAAATCTCTCCCTCAGT 58.885 38.462 0.00 0.00 31.02 3.41
472 473 6.545298 CCCATAAAAGAAAATCTCTCCCTCAG 59.455 42.308 0.00 0.00 31.02 3.35
473 474 6.217487 TCCCATAAAAGAAAATCTCTCCCTCA 59.783 38.462 0.00 0.00 31.02 3.86
474 475 6.663734 TCCCATAAAAGAAAATCTCTCCCTC 58.336 40.000 0.00 0.00 31.02 4.30
475 476 6.658555 TCCCATAAAAGAAAATCTCTCCCT 57.341 37.500 0.00 0.00 31.02 4.20
476 477 6.205658 CGATCCCATAAAAGAAAATCTCTCCC 59.794 42.308 0.00 0.00 31.02 4.30
477 478 6.992715 TCGATCCCATAAAAGAAAATCTCTCC 59.007 38.462 0.00 0.00 31.02 3.71
478 479 7.172361 CCTCGATCCCATAAAAGAAAATCTCTC 59.828 40.741 0.00 0.00 31.02 3.20
479 480 6.995091 CCTCGATCCCATAAAAGAAAATCTCT 59.005 38.462 0.00 0.00 35.13 3.10
480 481 6.205658 CCCTCGATCCCATAAAAGAAAATCTC 59.794 42.308 0.00 0.00 0.00 2.75
481 482 6.064717 CCCTCGATCCCATAAAAGAAAATCT 58.935 40.000 0.00 0.00 0.00 2.40
482 483 5.241728 CCCCTCGATCCCATAAAAGAAAATC 59.758 44.000 0.00 0.00 0.00 2.17
483 484 5.103686 TCCCCTCGATCCCATAAAAGAAAAT 60.104 40.000 0.00 0.00 0.00 1.82
484 485 4.228666 TCCCCTCGATCCCATAAAAGAAAA 59.771 41.667 0.00 0.00 0.00 2.29
485 486 3.783642 TCCCCTCGATCCCATAAAAGAAA 59.216 43.478 0.00 0.00 0.00 2.52
486 487 3.135895 GTCCCCTCGATCCCATAAAAGAA 59.864 47.826 0.00 0.00 0.00 2.52
487 488 2.704065 GTCCCCTCGATCCCATAAAAGA 59.296 50.000 0.00 0.00 0.00 2.52
488 489 2.224548 GGTCCCCTCGATCCCATAAAAG 60.225 54.545 0.00 0.00 0.00 2.27
489 490 1.772453 GGTCCCCTCGATCCCATAAAA 59.228 52.381 0.00 0.00 0.00 1.52
490 491 1.430992 GGTCCCCTCGATCCCATAAA 58.569 55.000 0.00 0.00 0.00 1.40
491 492 0.830444 CGGTCCCCTCGATCCCATAA 60.830 60.000 0.00 0.00 0.00 1.90
492 493 1.228769 CGGTCCCCTCGATCCCATA 60.229 63.158 0.00 0.00 0.00 2.74
493 494 2.387851 ATCGGTCCCCTCGATCCCAT 62.388 60.000 0.00 0.00 42.82 4.00
494 495 2.599139 AATCGGTCCCCTCGATCCCA 62.599 60.000 0.00 0.00 45.20 4.37
495 496 1.817911 GAATCGGTCCCCTCGATCCC 61.818 65.000 0.00 0.00 45.20 3.85
496 497 0.828343 AGAATCGGTCCCCTCGATCC 60.828 60.000 0.00 0.00 45.20 3.36
497 498 1.041437 AAGAATCGGTCCCCTCGATC 58.959 55.000 0.00 0.00 45.20 3.69
499 500 0.822164 GAAAGAATCGGTCCCCTCGA 59.178 55.000 0.00 0.00 41.04 4.04
500 501 0.179081 GGAAAGAATCGGTCCCCTCG 60.179 60.000 0.00 0.00 0.00 4.63
501 502 1.205055 AGGAAAGAATCGGTCCCCTC 58.795 55.000 2.28 0.00 31.25 4.30
502 503 1.670059 AAGGAAAGAATCGGTCCCCT 58.330 50.000 2.28 0.00 31.25 4.79
503 504 2.366533 GAAAGGAAAGAATCGGTCCCC 58.633 52.381 2.28 0.00 31.25 4.81
504 505 2.026169 AGGAAAGGAAAGAATCGGTCCC 60.026 50.000 2.28 0.00 31.25 4.46
505 506 3.010420 CAGGAAAGGAAAGAATCGGTCC 58.990 50.000 0.00 0.00 0.00 4.46
506 507 3.939066 TCAGGAAAGGAAAGAATCGGTC 58.061 45.455 0.00 0.00 0.00 4.79
507 508 4.265073 CATCAGGAAAGGAAAGAATCGGT 58.735 43.478 0.00 0.00 0.00 4.69
508 509 3.065925 GCATCAGGAAAGGAAAGAATCGG 59.934 47.826 0.00 0.00 0.00 4.18
509 510 3.065925 GGCATCAGGAAAGGAAAGAATCG 59.934 47.826 0.00 0.00 0.00 3.34
510 511 4.097589 CAGGCATCAGGAAAGGAAAGAATC 59.902 45.833 0.00 0.00 0.00 2.52
511 512 4.021916 CAGGCATCAGGAAAGGAAAGAAT 58.978 43.478 0.00 0.00 0.00 2.40
512 513 3.424703 CAGGCATCAGGAAAGGAAAGAA 58.575 45.455 0.00 0.00 0.00 2.52
513 514 2.881403 GCAGGCATCAGGAAAGGAAAGA 60.881 50.000 0.00 0.00 0.00 2.52
514 515 1.475682 GCAGGCATCAGGAAAGGAAAG 59.524 52.381 0.00 0.00 0.00 2.62
515 516 1.076024 AGCAGGCATCAGGAAAGGAAA 59.924 47.619 0.00 0.00 0.00 3.13
516 517 0.700564 AGCAGGCATCAGGAAAGGAA 59.299 50.000 0.00 0.00 0.00 3.36
517 518 0.254178 GAGCAGGCATCAGGAAAGGA 59.746 55.000 0.00 0.00 0.00 3.36
518 519 1.094073 CGAGCAGGCATCAGGAAAGG 61.094 60.000 0.00 0.00 0.00 3.11
519 520 1.094073 CCGAGCAGGCATCAGGAAAG 61.094 60.000 0.00 0.00 0.00 2.62
520 521 1.078214 CCGAGCAGGCATCAGGAAA 60.078 57.895 0.00 0.00 0.00 3.13
521 522 2.586245 CCGAGCAGGCATCAGGAA 59.414 61.111 0.00 0.00 0.00 3.36
522 523 3.473647 CCCGAGCAGGCATCAGGA 61.474 66.667 0.00 0.00 39.21 3.86
523 524 3.457625 CTCCCGAGCAGGCATCAGG 62.458 68.421 0.00 0.00 39.21 3.86
524 525 2.108566 CTCCCGAGCAGGCATCAG 59.891 66.667 0.00 0.00 39.21 2.90
525 526 2.685017 ACTCCCGAGCAGGCATCA 60.685 61.111 0.00 0.00 39.21 3.07
526 527 2.202987 CACTCCCGAGCAGGCATC 60.203 66.667 0.00 0.00 39.21 3.91
527 528 4.479993 GCACTCCCGAGCAGGCAT 62.480 66.667 0.00 0.00 39.21 4.40
529 530 3.438017 CTAGCACTCCCGAGCAGGC 62.438 68.421 0.00 0.00 39.21 4.85
530 531 2.811101 CTAGCACTCCCGAGCAGG 59.189 66.667 0.00 0.00 40.63 4.85
531 532 2.105930 GCTAGCACTCCCGAGCAG 59.894 66.667 10.63 0.00 34.20 4.24
532 533 3.826754 CGCTAGCACTCCCGAGCA 61.827 66.667 16.45 0.00 33.73 4.26
533 534 4.577246 CCGCTAGCACTCCCGAGC 62.577 72.222 16.45 0.00 0.00 5.03
534 535 3.905678 CCCGCTAGCACTCCCGAG 61.906 72.222 16.45 0.00 0.00 4.63
538 539 4.096003 TTGGCCCGCTAGCACTCC 62.096 66.667 16.45 11.94 0.00 3.85
539 540 2.820037 GTTGGCCCGCTAGCACTC 60.820 66.667 16.45 1.94 0.00 3.51
540 541 4.760047 CGTTGGCCCGCTAGCACT 62.760 66.667 16.45 0.00 0.00 4.40
553 554 4.215742 TCTATCGGGCGGCCGTTG 62.216 66.667 43.56 32.83 34.52 4.10
554 555 4.217159 GTCTATCGGGCGGCCGTT 62.217 66.667 43.56 37.87 34.52 4.44
556 557 4.944372 GTGTCTATCGGGCGGCCG 62.944 72.222 41.57 41.57 0.00 6.13
557 558 4.944372 CGTGTCTATCGGGCGGCC 62.944 72.222 20.04 20.04 0.00 6.13
558 559 4.203076 ACGTGTCTATCGGGCGGC 62.203 66.667 0.00 0.00 0.00 6.53
559 560 2.025727 GACGTGTCTATCGGGCGG 59.974 66.667 0.00 0.00 0.00 6.13
560 561 1.162181 TAGGACGTGTCTATCGGGCG 61.162 60.000 0.00 0.00 0.00 6.13
561 562 1.027357 TTAGGACGTGTCTATCGGGC 58.973 55.000 0.00 0.00 0.00 6.13
562 563 3.788333 TTTTAGGACGTGTCTATCGGG 57.212 47.619 0.00 0.00 0.00 5.14
582 583 3.681897 TGCATTTGCTTGTTCACGTTTTT 59.318 34.783 3.94 0.00 42.66 1.94
583 584 3.061965 GTGCATTTGCTTGTTCACGTTTT 59.938 39.130 3.94 0.00 42.66 2.43
584 585 2.602660 GTGCATTTGCTTGTTCACGTTT 59.397 40.909 3.94 0.00 42.66 3.60
585 586 2.192624 GTGCATTTGCTTGTTCACGTT 58.807 42.857 3.94 0.00 42.66 3.99
586 587 1.133982 TGTGCATTTGCTTGTTCACGT 59.866 42.857 3.94 0.00 42.66 4.49
611 612 1.012486 GTGACAGTTTAGGACGGCGG 61.012 60.000 13.24 0.00 0.00 6.13
616 617 5.046950 AGGATCTTCTGTGACAGTTTAGGAC 60.047 44.000 12.93 6.68 32.61 3.85
686 692 0.402566 CCAGGGAGAGGGATTGGGAT 60.403 60.000 0.00 0.00 0.00 3.85
694 700 1.893315 TATGGTTTCCAGGGAGAGGG 58.107 55.000 0.00 0.00 36.75 4.30
728 738 5.799827 TTCATTTGGATTTCCTTTTCGGT 57.200 34.783 0.00 0.00 36.82 4.69
729 739 5.120674 GCTTTCATTTGGATTTCCTTTTCGG 59.879 40.000 0.00 0.00 36.82 4.30
766 776 4.762289 AAGAGAGAGAGAGAGAGGAGAC 57.238 50.000 0.00 0.00 0.00 3.36
841 864 0.637195 TGGAGTAGAGGAAGAGGGGG 59.363 60.000 0.00 0.00 0.00 5.40
857 880 0.693049 GAGAGGAGGCTTGGTTTGGA 59.307 55.000 0.00 0.00 0.00 3.53
858 881 0.322906 GGAGAGGAGGCTTGGTTTGG 60.323 60.000 0.00 0.00 0.00 3.28
859 882 0.322906 GGGAGAGGAGGCTTGGTTTG 60.323 60.000 0.00 0.00 0.00 2.93
860 883 0.476611 AGGGAGAGGAGGCTTGGTTT 60.477 55.000 0.00 0.00 0.00 3.27
861 884 0.912006 GAGGGAGAGGAGGCTTGGTT 60.912 60.000 0.00 0.00 0.00 3.67
863 886 2.069430 GGAGGGAGAGGAGGCTTGG 61.069 68.421 0.00 0.00 0.00 3.61
864 887 2.069430 GGGAGGGAGAGGAGGCTTG 61.069 68.421 0.00 0.00 0.00 4.01
865 888 2.370633 GGGAGGGAGAGGAGGCTT 59.629 66.667 0.00 0.00 0.00 4.35
866 889 3.773154 GGGGAGGGAGAGGAGGCT 61.773 72.222 0.00 0.00 0.00 4.58
873 902 1.417506 GGGAATAATGGGGGAGGGAGA 60.418 57.143 0.00 0.00 0.00 3.71
1228 1257 4.421479 CTCGGCCTCGACACGCTT 62.421 66.667 0.00 0.00 40.88 4.68
1324 1356 2.430956 CATGAACCGAAGAAAATCGCG 58.569 47.619 0.00 0.00 41.40 5.87
1342 1374 2.021457 CGCCGAGAAATAAAACCCCAT 58.979 47.619 0.00 0.00 0.00 4.00
1373 1405 1.074248 CCTAAACCCTGGCACGGTT 59.926 57.895 14.17 14.17 45.70 4.44
1381 1413 2.292292 CGACACAAAACCCTAAACCCTG 59.708 50.000 0.00 0.00 0.00 4.45
1451 1483 5.065235 AGCCAAATTGACAAGGAAAAATGG 58.935 37.500 0.00 0.00 0.00 3.16
1514 1546 6.824305 AAGATATTGGGGAAAATAGCATCG 57.176 37.500 0.00 0.00 32.13 3.84
1539 1571 7.492344 CCCCAATAAACAGCAAAGCTTAATAAG 59.508 37.037 0.00 0.00 36.40 1.73
1547 1582 3.893326 ATCCCCAATAAACAGCAAAGC 57.107 42.857 0.00 0.00 0.00 3.51
1574 1609 1.872237 CGCGAAAGAAGAGTTGGGACA 60.872 52.381 0.00 0.00 0.00 4.02
1575 1610 0.790814 CGCGAAAGAAGAGTTGGGAC 59.209 55.000 0.00 0.00 0.00 4.46
1577 1612 1.071605 CTCGCGAAAGAAGAGTTGGG 58.928 55.000 11.33 0.00 34.28 4.12
1578 1613 1.784525 ACTCGCGAAAGAAGAGTTGG 58.215 50.000 11.33 0.00 44.27 3.77
1594 1630 4.184629 AGAACTATTGCATCGGTCAACTC 58.815 43.478 0.00 0.00 0.00 3.01
1596 1632 4.033358 CAGAGAACTATTGCATCGGTCAAC 59.967 45.833 0.00 0.00 0.00 3.18
1601 1637 3.935203 ACAACAGAGAACTATTGCATCGG 59.065 43.478 0.00 0.00 34.30 4.18
1645 1682 8.438676 TCACACTAAAGAAAAGAAAGAAGGAG 57.561 34.615 0.00 0.00 0.00 3.69
1651 1688 8.450964 TCAACACTCACACTAAAGAAAAGAAAG 58.549 33.333 0.00 0.00 0.00 2.62
1714 1754 6.427242 GGAATAGCTAAACCCATTACTAGCAC 59.573 42.308 0.00 0.00 39.39 4.40
1771 1814 7.775053 TGGCACTAATTTCTTCAAAATAGGT 57.225 32.000 0.00 0.00 31.53 3.08
1906 1956 5.126067 AGGCCAAATACAGCACTAGTATTG 58.874 41.667 5.01 0.00 40.30 1.90
1909 1959 3.134081 GGAGGCCAAATACAGCACTAGTA 59.866 47.826 5.01 0.00 0.00 1.82
1917 1967 4.446371 CACTAAGAGGAGGCCAAATACAG 58.554 47.826 5.01 0.00 0.00 2.74
1918 1968 3.199946 CCACTAAGAGGAGGCCAAATACA 59.800 47.826 5.01 0.00 0.00 2.29
1930 1980 2.576191 TGGATGAAACCCCACTAAGAGG 59.424 50.000 0.00 0.00 0.00 3.69
1990 2040 0.691078 CGGGAGGGAAAGGAGGATGA 60.691 60.000 0.00 0.00 0.00 2.92
2008 2058 1.544246 GGGGAAATGGTGGAAAGAACG 59.456 52.381 0.00 0.00 0.00 3.95
2029 2079 0.113190 AAAAACAGGGGAGAGGCCAG 59.887 55.000 5.01 0.00 38.95 4.85
2062 2134 3.022897 GGTCCCTACCACCTCCATT 57.977 57.895 0.00 0.00 45.98 3.16
2089 2161 6.759356 GGCTTTTGGTTGCTAAAAGACTAAAA 59.241 34.615 17.68 0.00 45.40 1.52
2090 2162 6.277605 GGCTTTTGGTTGCTAAAAGACTAAA 58.722 36.000 17.68 0.00 45.40 1.85
2091 2163 5.838529 GGCTTTTGGTTGCTAAAAGACTAA 58.161 37.500 17.68 0.00 45.40 2.24
2092 2164 5.447624 GGCTTTTGGTTGCTAAAAGACTA 57.552 39.130 17.68 0.00 45.40 2.59
2093 2165 4.322080 GGCTTTTGGTTGCTAAAAGACT 57.678 40.909 17.68 0.00 45.40 3.24
2095 2167 3.304829 AGGGCTTTTGGTTGCTAAAAGA 58.695 40.909 17.68 0.00 44.10 2.52
2096 2168 3.653344 GAGGGCTTTTGGTTGCTAAAAG 58.347 45.455 11.61 11.61 44.16 2.27
2198 2270 7.316640 CAAAGAAGTGACATGCTAGTAGTAGT 58.683 38.462 6.47 0.00 0.00 2.73
2199 2271 6.754209 CCAAAGAAGTGACATGCTAGTAGTAG 59.246 42.308 0.00 0.00 0.00 2.57
2200 2272 6.351033 CCCAAAGAAGTGACATGCTAGTAGTA 60.351 42.308 0.00 0.00 0.00 1.82
2210 2282 3.138283 TCCAGAACCCAAAGAAGTGACAT 59.862 43.478 0.00 0.00 0.00 3.06
2238 2310 1.199097 ACCGCGACATGACATTTTTCC 59.801 47.619 8.23 0.00 0.00 3.13
2316 2424 0.457509 TGCACCAAAAACTGCACACG 60.458 50.000 0.00 0.00 38.49 4.49
2330 2438 1.168714 CTTTCCCTAGCTTGTGCACC 58.831 55.000 15.69 0.00 42.74 5.01
2334 2442 2.783135 TCTTGCTTTCCCTAGCTTGTG 58.217 47.619 0.00 0.00 41.76 3.33
2578 2692 0.179086 CAAACAAGTGCCCCCACAAC 60.179 55.000 0.00 0.00 44.53 3.32
2718 3214 0.106719 CACCACCACCAAGACACCTT 60.107 55.000 0.00 0.00 0.00 3.50
2895 3391 1.136690 TTTAGACACGCGCTGTTCAG 58.863 50.000 5.73 0.00 31.03 3.02
2897 3393 2.656192 TTTTTAGACACGCGCTGTTC 57.344 45.000 5.73 6.22 31.03 3.18
2954 3450 1.750193 CCCAACAACACACACTGACT 58.250 50.000 0.00 0.00 0.00 3.41
2955 3451 0.100503 GCCCAACAACACACACTGAC 59.899 55.000 0.00 0.00 0.00 3.51
2956 3452 1.034838 GGCCCAACAACACACACTGA 61.035 55.000 0.00 0.00 0.00 3.41
3016 3513 0.753111 CCAATAACTCCAGCCCCAGC 60.753 60.000 0.00 0.00 40.32 4.85
3234 3731 6.305399 CACAATTTGCTACACATTTCTTACCG 59.695 38.462 0.00 0.00 0.00 4.02
3329 3826 4.705023 ACATATCGATATCATCCGTGGTCA 59.295 41.667 15.08 0.00 0.00 4.02
3353 3850 6.478512 AACAGGGTATGCAAAAAGAAGAAA 57.521 33.333 0.00 0.00 0.00 2.52
3411 3908 2.973945 AGAAACAACCATAGCGAGGAC 58.026 47.619 0.00 0.00 0.00 3.85
3417 3914 8.915654 CACTCAATTTTTAGAAACAACCATAGC 58.084 33.333 0.00 0.00 0.00 2.97
3516 4013 2.435805 GTGGATCCAGGAGTGCTTATCA 59.564 50.000 16.81 0.00 0.00 2.15
3602 4099 4.822685 ACTCATTCATCTCTGCTGAACT 57.177 40.909 0.00 0.00 35.57 3.01
3675 4172 4.780815 TGACTGAGAGAACCAAACAATGT 58.219 39.130 0.00 0.00 0.00 2.71
3736 4239 1.881973 GAGTTGGCATTCTTCACTGCA 59.118 47.619 0.00 0.00 40.18 4.41
3792 4295 5.068987 ACACTTTTTATCAAGAGCAAAGGCA 59.931 36.000 0.00 0.00 44.61 4.75
3958 4461 1.000993 GGTGGAGGGAGCAGAGAGA 59.999 63.158 0.00 0.00 0.00 3.10
3964 4467 2.359169 CGCTAAGGTGGAGGGAGCA 61.359 63.158 0.00 0.00 32.55 4.26
4066 4569 7.382898 TCAGCATTACTTCTGTATGTTACACA 58.617 34.615 0.00 0.00 34.46 3.72
4122 4626 3.326747 ACAGAATGAGTTGCTAACGGTC 58.673 45.455 0.00 0.00 39.69 4.79
4180 4684 1.826385 ACATTAGTCTGGCAACTGGC 58.174 50.000 11.08 0.00 41.01 4.85
4234 4738 2.094675 CCCAGCCCACATTACAAGAAG 58.905 52.381 0.00 0.00 0.00 2.85
4235 4739 1.890573 GCCCAGCCCACATTACAAGAA 60.891 52.381 0.00 0.00 0.00 2.52
4236 4740 0.323360 GCCCAGCCCACATTACAAGA 60.323 55.000 0.00 0.00 0.00 3.02
4284 4788 0.956633 CACTTCAGGTGCAATGCAGT 59.043 50.000 8.73 0.00 40.08 4.40
4324 4829 5.707298 ACTTTTCACATACCATGAACCAGAG 59.293 40.000 0.00 0.00 35.82 3.35
4439 4944 8.737168 ACTACAAAGCATAGAAGCAATAATGA 57.263 30.769 0.00 0.00 36.85 2.57
4463 4968 4.276678 TGAGCAATGGAGCATAGCAAATAC 59.723 41.667 0.00 0.00 36.85 1.89
4464 4969 4.463070 TGAGCAATGGAGCATAGCAAATA 58.537 39.130 0.00 0.00 36.85 1.40
4465 4970 3.293337 TGAGCAATGGAGCATAGCAAAT 58.707 40.909 0.00 0.00 36.85 2.32
4529 5034 1.757118 TCCAAGTAGAATCCAGGCTCG 59.243 52.381 0.00 0.00 0.00 5.03
4570 5076 4.752146 TCACACATCACAATGCACAAAAA 58.248 34.783 0.00 0.00 36.26 1.94
4708 5214 9.677567 TCTAAACAGTTTGAATTTTGAGCATAC 57.322 29.630 8.93 0.00 0.00 2.39
4758 5264 9.671279 AAAATTTCCCAGAATATTCAATGGAAC 57.329 29.630 22.66 0.00 35.46 3.62
4759 5265 9.889128 GAAAATTTCCCAGAATATTCAATGGAA 57.111 29.630 20.21 20.41 34.60 3.53
4760 5266 8.196771 CGAAAATTTCCCAGAATATTCAATGGA 58.803 33.333 20.21 16.82 34.60 3.41
4761 5267 7.981225 ACGAAAATTTCCCAGAATATTCAATGG 59.019 33.333 17.56 15.67 0.00 3.16
4762 5268 8.931385 ACGAAAATTTCCCAGAATATTCAATG 57.069 30.769 17.56 7.84 0.00 2.82
4763 5269 9.586435 GAACGAAAATTTCCCAGAATATTCAAT 57.414 29.630 17.56 5.34 0.00 2.57
4764 5270 8.032451 GGAACGAAAATTTCCCAGAATATTCAA 58.968 33.333 17.56 3.16 37.18 2.69
4765 5271 7.177568 TGGAACGAAAATTTCCCAGAATATTCA 59.822 33.333 17.56 0.00 41.80 2.57
4766 5272 7.543756 TGGAACGAAAATTTCCCAGAATATTC 58.456 34.615 7.41 7.41 41.80 1.75
4767 5273 7.475137 TGGAACGAAAATTTCCCAGAATATT 57.525 32.000 0.00 0.00 41.80 1.28
4768 5274 7.660030 ATGGAACGAAAATTTCCCAGAATAT 57.340 32.000 7.91 0.00 41.80 1.28
4769 5275 7.475137 AATGGAACGAAAATTTCCCAGAATA 57.525 32.000 7.91 0.00 41.80 1.75
4770 5276 6.358974 AATGGAACGAAAATTTCCCAGAAT 57.641 33.333 7.91 0.00 41.80 2.40
4771 5277 5.799827 AATGGAACGAAAATTTCCCAGAA 57.200 34.783 7.91 0.00 41.80 3.02
4772 5278 5.510520 CCAAATGGAACGAAAATTTCCCAGA 60.511 40.000 7.91 0.00 41.80 3.86
4773 5279 4.690280 CCAAATGGAACGAAAATTTCCCAG 59.310 41.667 7.91 0.00 41.80 4.45
4774 5280 4.345257 TCCAAATGGAACGAAAATTTCCCA 59.655 37.500 0.00 5.00 41.80 4.37
4775 5281 4.888917 TCCAAATGGAACGAAAATTTCCC 58.111 39.130 0.00 0.00 41.80 3.97
4795 6747 7.649306 CACAATTAGCTGCTAAACCATTTATCC 59.351 37.037 24.34 0.00 29.35 2.59
4796 6748 8.190784 ACACAATTAGCTGCTAAACCATTTATC 58.809 33.333 24.34 0.00 29.35 1.75
4798 6750 7.461182 ACACAATTAGCTGCTAAACCATTTA 57.539 32.000 24.34 1.05 29.35 1.40
4801 6753 5.982890 AACACAATTAGCTGCTAAACCAT 57.017 34.783 24.34 6.80 29.35 3.55
4802 6754 5.782893 AAACACAATTAGCTGCTAAACCA 57.217 34.783 24.34 3.70 29.35 3.67
4803 6755 6.212955 TCAAAACACAATTAGCTGCTAAACC 58.787 36.000 24.34 0.00 29.35 3.27
4818 6770 9.255304 GGTTTTATATTTCAAGCTCAAAACACA 57.745 29.630 0.00 0.00 36.56 3.72
4819 6771 8.708742 GGGTTTTATATTTCAAGCTCAAAACAC 58.291 33.333 0.00 0.00 36.56 3.32
4820 6772 8.646900 AGGGTTTTATATTTCAAGCTCAAAACA 58.353 29.630 0.00 0.00 36.56 2.83
4842 6794 9.939802 GATAAACGGTCTATGATTAAATAGGGT 57.060 33.333 0.00 0.00 32.03 4.34
4844 6796 9.938280 TGGATAAACGGTCTATGATTAAATAGG 57.062 33.333 0.00 0.00 32.03 2.57
4849 6801 9.839817 TCATTTGGATAAACGGTCTATGATTAA 57.160 29.630 0.00 0.00 0.00 1.40
4851 6803 8.746052 TTCATTTGGATAAACGGTCTATGATT 57.254 30.769 0.00 0.00 0.00 2.57
4852 6804 8.621286 GTTTCATTTGGATAAACGGTCTATGAT 58.379 33.333 0.00 0.00 0.00 2.45
4857 6809 6.642707 TTGTTTCATTTGGATAAACGGTCT 57.357 33.333 0.00 0.00 36.19 3.85
4858 6810 7.701809 TTTTGTTTCATTTGGATAAACGGTC 57.298 32.000 0.00 0.00 36.19 4.79
4860 6812 9.943163 AAATTTTTGTTTCATTTGGATAAACGG 57.057 25.926 0.00 0.00 36.19 4.44
4867 6819 8.783833 TCTGTGAAATTTTTGTTTCATTTGGA 57.216 26.923 5.49 1.01 46.33 3.53
4882 7906 8.365060 TGTTCCATTCCATATTCTGTGAAATT 57.635 30.769 0.00 0.00 0.00 1.82
4883 7907 7.959658 TGTTCCATTCCATATTCTGTGAAAT 57.040 32.000 0.00 0.00 0.00 2.17
4888 7912 8.219868 TCATACATGTTCCATTCCATATTCTGT 58.780 33.333 2.30 0.00 0.00 3.41
4894 8331 7.936847 GGTAAGTCATACATGTTCCATTCCATA 59.063 37.037 2.30 0.00 36.14 2.74
4895 8332 6.772716 GGTAAGTCATACATGTTCCATTCCAT 59.227 38.462 2.30 0.00 36.14 3.41
4899 8336 6.957631 TCAGGTAAGTCATACATGTTCCATT 58.042 36.000 2.30 0.00 44.58 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.