Multiple sequence alignment - TraesCS1A01G149000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G149000 chr1A 100.000 7982 0 0 1 7982 256711470 256719451 0.000000e+00 14741.0
1 TraesCS1A01G149000 chr1A 91.057 123 6 2 1624 1745 256712982 256713100 2.310000e-35 161.0
2 TraesCS1A01G149000 chr1A 91.057 123 6 2 1513 1631 256713093 256713214 2.310000e-35 161.0
3 TraesCS1A01G149000 chr1A 82.353 85 9 4 5049 5130 16447324 16447243 1.440000e-07 69.4
4 TraesCS1A01G149000 chr1D 95.475 3116 113 12 4663 7757 202295102 202298210 0.000000e+00 4948.0
5 TraesCS1A01G149000 chr1D 95.217 2488 73 14 2151 4615 202292644 202295108 0.000000e+00 3893.0
6 TraesCS1A01G149000 chr1D 96.261 1257 26 8 907 2146 202291355 202292607 0.000000e+00 2041.0
7 TraesCS1A01G149000 chr1D 91.200 125 6 2 1511 1631 202292086 202292209 1.780000e-36 165.0
8 TraesCS1A01G149000 chr1D 88.034 117 6 3 1624 1737 202291968 202292079 1.810000e-26 132.0
9 TraesCS1A01G149000 chr7B 89.316 2471 136 42 1390 3806 405054850 405052454 0.000000e+00 2983.0
10 TraesCS1A01G149000 chr7B 89.380 1177 84 21 5152 6296 405051296 405050129 0.000000e+00 1443.0
11 TraesCS1A01G149000 chr7B 91.906 939 48 13 3 916 405064890 405063955 0.000000e+00 1288.0
12 TraesCS1A01G149000 chr7B 87.584 1039 86 28 6738 7752 405049690 405048671 0.000000e+00 1164.0
13 TraesCS1A01G149000 chr7B 87.101 690 33 20 4380 5042 405052120 405051460 0.000000e+00 730.0
14 TraesCS1A01G149000 chr7B 89.971 349 29 4 3995 4340 405052462 405052117 5.680000e-121 446.0
15 TraesCS1A01G149000 chr7B 89.908 327 19 7 6420 6736 405050096 405049774 7.460000e-110 409.0
16 TraesCS1A01G149000 chr7B 91.005 189 10 2 1035 1223 405055121 405054940 1.720000e-61 248.0
17 TraesCS1A01G149000 chr7B 91.304 115 6 2 1623 1737 405054725 405054615 3.860000e-33 154.0
18 TraesCS1A01G149000 chr7B 90.909 77 4 1 1281 1354 405054925 405054849 5.100000e-17 100.0
19 TraesCS1A01G149000 chr7B 100.000 42 0 0 914 955 405055461 405055420 2.390000e-10 78.7
20 TraesCS1A01G149000 chr7B 77.966 118 23 3 7280 7395 256002699 256002815 4.000000e-08 71.3
21 TraesCS1A01G149000 chr1B 92.511 227 15 2 7758 7982 270315790 270315564 2.780000e-84 324.0
22 TraesCS1A01G149000 chr1B 95.946 74 3 0 7758 7831 270317669 270317596 3.910000e-23 121.0
23 TraesCS1A01G149000 chr1B 95.946 74 3 0 7758 7831 287728103 287728030 3.910000e-23 121.0
24 TraesCS1A01G149000 chr3B 88.017 242 13 5 7756 7982 647175574 647175334 1.020000e-68 272.0
25 TraesCS1A01G149000 chr4D 96.711 152 5 0 7831 7982 448522450 448522299 3.700000e-63 254.0
26 TraesCS1A01G149000 chr4D 96.667 150 5 0 7831 7980 1849452 1849601 4.780000e-62 250.0
27 TraesCS1A01G149000 chr4D 96.667 150 5 0 7833 7982 390848234 390848383 4.780000e-62 250.0
28 TraesCS1A01G149000 chr4D 96.053 152 6 0 7831 7982 448524374 448524223 1.720000e-61 248.0
29 TraesCS1A01G149000 chr4D 88.272 162 18 1 5566 5727 317186784 317186944 8.170000e-45 193.0
30 TraesCS1A01G149000 chr4D 78.193 321 45 8 244 541 317185283 317185601 1.770000e-41 182.0
31 TraesCS1A01G149000 chr4D 95.946 74 3 0 7758 7831 390848120 390848193 3.910000e-23 121.0
32 TraesCS1A01G149000 chr4D 95.946 74 3 0 7758 7831 448524492 448524419 3.910000e-23 121.0
33 TraesCS1A01G149000 chr4D 92.537 67 5 0 2061 2127 317186388 317186454 6.590000e-16 97.1
34 TraesCS1A01G149000 chr2D 96.667 150 5 0 7833 7982 317866042 317865893 4.780000e-62 250.0
35 TraesCS1A01G149000 chr2D 96.053 152 6 0 7831 7982 409602109 409601958 1.720000e-61 248.0
36 TraesCS1A01G149000 chr6A 96.053 152 6 0 7831 7982 32748289 32748440 1.720000e-61 248.0
37 TraesCS1A01G149000 chrUn 89.730 185 14 5 7801 7982 462954676 462954494 1.730000e-56 231.0
38 TraesCS1A01G149000 chr4B 86.286 175 22 2 5564 5737 394380933 394381106 1.060000e-43 189.0
39 TraesCS1A01G149000 chr4B 77.570 321 47 10 244 541 394379441 394379759 3.830000e-38 171.0
40 TraesCS1A01G149000 chr4B 93.103 87 6 0 914 1000 394380394 394380480 2.340000e-25 128.0
41 TraesCS1A01G149000 chr4B 89.552 67 7 0 2061 2127 394380546 394380612 1.430000e-12 86.1
42 TraesCS1A01G149000 chr4A 77.882 321 46 10 244 541 157570521 157570203 8.230000e-40 176.0
43 TraesCS1A01G149000 chr4A 84.884 172 25 1 5566 5737 157569026 157568856 1.060000e-38 172.0
44 TraesCS1A01G149000 chr4A 93.333 90 6 0 914 1003 157569568 157569479 5.030000e-27 134.0
45 TraesCS1A01G149000 chr4A 91.045 67 6 0 2061 2127 157569416 157569350 3.070000e-14 91.6
46 TraesCS1A01G149000 chr3D 95.946 74 3 0 7758 7831 605030048 605030121 3.910000e-23 121.0
47 TraesCS1A01G149000 chr3A 95.946 74 3 0 7758 7831 423961313 423961386 3.910000e-23 121.0
48 TraesCS1A01G149000 chr3A 95.946 74 3 0 7758 7831 550638675 550638602 3.910000e-23 121.0
49 TraesCS1A01G149000 chr7D 76.692 133 28 3 7270 7400 339013746 339013615 4.000000e-08 71.3
50 TraesCS1A01G149000 chr7A 76.562 128 27 3 7270 7395 383432530 383432656 5.170000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G149000 chr1A 256711470 256719451 7981 False 14741.000000 14741 100.000000 1 7982 1 chr1A.!!$F1 7981
1 TraesCS1A01G149000 chr1D 202291355 202298210 6855 False 2235.800000 4948 93.237400 907 7757 5 chr1D.!!$F1 6850
2 TraesCS1A01G149000 chr7B 405063955 405064890 935 True 1288.000000 1288 91.906000 3 916 1 chr7B.!!$R1 913
3 TraesCS1A01G149000 chr7B 405048671 405055461 6790 True 775.570000 2983 90.647800 914 7752 10 chr7B.!!$R2 6838
4 TraesCS1A01G149000 chr1B 270315564 270317669 2105 True 222.500000 324 94.228500 7758 7982 2 chr1B.!!$R2 224
5 TraesCS1A01G149000 chr4D 448522299 448524492 2193 True 207.666667 254 96.236667 7758 7982 3 chr4D.!!$R1 224

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
313 329 0.106868 CAGCTGATGAGGGGCAATCA 60.107 55.000 8.42 0.00 0.00 2.57 F
478 500 0.320374 CACTAACTCCGGTCCAGCAA 59.680 55.000 0.00 0.00 0.00 3.91 F
755 777 0.687354 GGAGAGGTTCCAGCTGTTGA 59.313 55.000 13.81 0.01 46.01 3.18 F
1375 1626 1.271926 GCTCAGGTGGGGTTACATGTT 60.272 52.381 2.30 0.00 34.26 2.71 F
2635 2953 2.900716 TGCGCCAGCTATAATGTGTA 57.099 45.000 4.18 0.00 45.42 2.90 F
2992 3310 1.029947 AAAATGGGGCTAGCGTTCCG 61.030 55.000 9.00 0.00 0.00 4.30 F
4350 4686 0.814457 GAGTGCACATCGTCTCCTCT 59.186 55.000 21.04 0.00 0.00 3.69 F
4958 5323 0.179062 CATGCAGTGAGTCCTAGGGC 60.179 60.000 4.79 4.79 0.00 5.19 F
6151 6615 0.886563 GAGCAGCCAAGCAACTCAAT 59.113 50.000 0.00 0.00 34.44 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1375 1626 1.151987 TGGTTCTTCCTTCCCCGGA 60.152 57.895 0.73 0.0 37.07 5.14 R
1919 2187 2.763039 TCCCTCTAATCATGTGCCTGA 58.237 47.619 0.00 0.0 0.00 3.86 R
2737 3055 1.813513 GTGGTCATCACCTTGTCCAG 58.186 55.000 0.00 0.0 44.17 3.86 R
2808 3126 4.025040 TGAATCATCTGAAGTGTTGCCT 57.975 40.909 0.00 0.0 0.00 4.75 R
3601 3934 0.032316 AGAGAGCATGCAGGAGAGGA 60.032 55.000 21.98 0.0 0.00 3.71 R
4648 5012 0.033796 CATGCCCCAATCAGTCACCT 60.034 55.000 0.00 0.0 0.00 4.00 R
5924 6375 0.527817 GACGGACCATTGCCTACTCG 60.528 60.000 0.00 0.0 0.00 4.18 R
6811 7379 0.037326 TCGTGTCATTCCTGGTCTGC 60.037 55.000 0.00 0.0 0.00 4.26 R
7800 8400 1.308216 CCATCCCTCCTTCCACCCT 60.308 63.158 0.00 0.0 0.00 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 5.390145 GACCATGTCATTTTGCAAGAAATGC 60.390 40.000 15.92 12.34 43.42 3.56
52 66 8.909671 CAAGAAATGCTTTTCAGTATTGACTTC 58.090 33.333 22.69 0.00 43.09 3.01
54 68 8.295288 AGAAATGCTTTTCAGTATTGACTTCTG 58.705 33.333 22.69 0.00 43.09 3.02
66 80 9.429359 CAGTATTGACTTCTGAAAATAGACACT 57.571 33.333 0.00 0.00 31.73 3.55
72 86 7.232737 TGACTTCTGAAAATAGACACTACCTGA 59.767 37.037 0.00 0.00 0.00 3.86
80 94 2.379972 AGACACTACCTGATTCCCTCG 58.620 52.381 0.00 0.00 0.00 4.63
117 133 6.467677 TGAGGACCTTGTTAGAAAATGAGAG 58.532 40.000 0.00 0.00 0.00 3.20
313 329 0.106868 CAGCTGATGAGGGGCAATCA 60.107 55.000 8.42 0.00 0.00 2.57
319 335 2.041485 TGATGAGGGGCAATCAACAGAA 59.959 45.455 0.00 0.00 0.00 3.02
324 340 2.365293 AGGGGCAATCAACAGAACAAAC 59.635 45.455 0.00 0.00 0.00 2.93
353 369 1.541147 CGGATGATGTTGTGGCTTTGT 59.459 47.619 0.00 0.00 0.00 2.83
354 370 2.414559 CGGATGATGTTGTGGCTTTGTC 60.415 50.000 0.00 0.00 0.00 3.18
369 385 3.861131 GCTTTGTCAAAGACGAGGAGCTA 60.861 47.826 26.14 0.00 41.02 3.32
385 401 3.307762 GGAGCTATGTTCCTGGTGAAAGT 60.308 47.826 0.00 0.00 33.94 2.66
387 403 3.073062 AGCTATGTTCCTGGTGAAAGTGT 59.927 43.478 0.00 0.00 33.94 3.55
388 404 3.437049 GCTATGTTCCTGGTGAAAGTGTC 59.563 47.826 0.00 0.00 33.94 3.67
405 427 9.856488 TGAAAGTGTCTGTGATATACTAAGAAC 57.144 33.333 0.00 0.00 0.00 3.01
416 438 7.115095 GTGATATACTAAGAACGCCTTTGCTAG 59.885 40.741 0.00 0.00 36.34 3.42
430 452 5.717119 CCTTTGCTAGCAGAAAATGTGAAT 58.283 37.500 18.45 0.00 0.00 2.57
431 453 6.161381 CCTTTGCTAGCAGAAAATGTGAATT 58.839 36.000 18.45 0.00 0.00 2.17
432 454 7.315142 CCTTTGCTAGCAGAAAATGTGAATTA 58.685 34.615 18.45 0.00 0.00 1.40
438 460 6.801539 AGCAGAAAATGTGAATTACTCGAA 57.198 33.333 0.00 0.00 0.00 3.71
454 476 3.055819 ACTCGAATAGTGGAAGCACACAT 60.056 43.478 8.57 0.00 43.72 3.21
478 500 0.320374 CACTAACTCCGGTCCAGCAA 59.680 55.000 0.00 0.00 0.00 3.91
508 530 6.205071 TGTACTTGCACAATGTTTACATGTG 58.795 36.000 9.11 15.14 37.87 3.21
546 568 3.055819 AGTGATGAAATGTCTGGTACGCT 60.056 43.478 0.00 0.00 0.00 5.07
547 569 3.307242 GTGATGAAATGTCTGGTACGCTC 59.693 47.826 0.00 0.00 0.00 5.03
548 570 3.056179 TGATGAAATGTCTGGTACGCTCA 60.056 43.478 0.00 0.00 0.00 4.26
549 571 3.610040 TGAAATGTCTGGTACGCTCAT 57.390 42.857 0.00 0.00 0.00 2.90
550 572 4.729227 TGAAATGTCTGGTACGCTCATA 57.271 40.909 0.00 0.00 0.00 2.15
551 573 5.276461 TGAAATGTCTGGTACGCTCATAT 57.724 39.130 0.00 0.00 0.00 1.78
552 574 5.670485 TGAAATGTCTGGTACGCTCATATT 58.330 37.500 0.00 0.00 0.00 1.28
553 575 6.112734 TGAAATGTCTGGTACGCTCATATTT 58.887 36.000 0.00 0.00 0.00 1.40
554 576 6.597672 TGAAATGTCTGGTACGCTCATATTTT 59.402 34.615 0.00 0.00 0.00 1.82
555 577 6.604735 AATGTCTGGTACGCTCATATTTTC 57.395 37.500 0.00 0.00 0.00 2.29
556 578 5.079689 TGTCTGGTACGCTCATATTTTCA 57.920 39.130 0.00 0.00 0.00 2.69
557 579 5.670485 TGTCTGGTACGCTCATATTTTCAT 58.330 37.500 0.00 0.00 0.00 2.57
558 580 6.112734 TGTCTGGTACGCTCATATTTTCATT 58.887 36.000 0.00 0.00 0.00 2.57
559 581 6.597672 TGTCTGGTACGCTCATATTTTCATTT 59.402 34.615 0.00 0.00 0.00 2.32
560 582 7.126398 GTCTGGTACGCTCATATTTTCATTTC 58.874 38.462 0.00 0.00 0.00 2.17
561 583 7.011482 GTCTGGTACGCTCATATTTTCATTTCT 59.989 37.037 0.00 0.00 0.00 2.52
562 584 7.552687 TCTGGTACGCTCATATTTTCATTTCTT 59.447 33.333 0.00 0.00 0.00 2.52
563 585 7.693952 TGGTACGCTCATATTTTCATTTCTTC 58.306 34.615 0.00 0.00 0.00 2.87
564 586 7.552687 TGGTACGCTCATATTTTCATTTCTTCT 59.447 33.333 0.00 0.00 0.00 2.85
565 587 7.852945 GGTACGCTCATATTTTCATTTCTTCTG 59.147 37.037 0.00 0.00 0.00 3.02
566 588 6.789262 ACGCTCATATTTTCATTTCTTCTGG 58.211 36.000 0.00 0.00 0.00 3.86
567 589 6.599244 ACGCTCATATTTTCATTTCTTCTGGA 59.401 34.615 0.00 0.00 0.00 3.86
568 590 6.909357 CGCTCATATTTTCATTTCTTCTGGAC 59.091 38.462 0.00 0.00 0.00 4.02
569 591 7.414429 CGCTCATATTTTCATTTCTTCTGGACA 60.414 37.037 0.00 0.00 0.00 4.02
570 592 7.914346 GCTCATATTTTCATTTCTTCTGGACAG 59.086 37.037 0.00 0.00 0.00 3.51
571 593 8.868522 TCATATTTTCATTTCTTCTGGACAGT 57.131 30.769 0.00 0.00 0.00 3.55
572 594 9.958180 TCATATTTTCATTTCTTCTGGACAGTA 57.042 29.630 0.00 0.00 0.00 2.74
573 595 9.994432 CATATTTTCATTTCTTCTGGACAGTAC 57.006 33.333 0.00 0.00 0.00 2.73
574 596 9.739276 ATATTTTCATTTCTTCTGGACAGTACA 57.261 29.630 0.00 0.00 0.00 2.90
575 597 7.873719 TTTTCATTTCTTCTGGACAGTACAA 57.126 32.000 0.00 0.00 0.00 2.41
576 598 7.496529 TTTCATTTCTTCTGGACAGTACAAG 57.503 36.000 0.00 0.00 0.00 3.16
577 599 6.419484 TCATTTCTTCTGGACAGTACAAGA 57.581 37.500 0.00 0.00 0.00 3.02
578 600 7.009179 TCATTTCTTCTGGACAGTACAAGAT 57.991 36.000 0.00 0.00 0.00 2.40
579 601 8.134202 TCATTTCTTCTGGACAGTACAAGATA 57.866 34.615 0.00 0.00 0.00 1.98
580 602 8.035394 TCATTTCTTCTGGACAGTACAAGATAC 58.965 37.037 0.00 0.00 0.00 2.24
581 603 6.911250 TTCTTCTGGACAGTACAAGATACA 57.089 37.500 0.00 0.00 0.00 2.29
582 604 7.482169 TTCTTCTGGACAGTACAAGATACAT 57.518 36.000 0.00 0.00 0.00 2.29
583 605 7.482169 TCTTCTGGACAGTACAAGATACATT 57.518 36.000 0.00 0.00 0.00 2.71
584 606 7.907389 TCTTCTGGACAGTACAAGATACATTT 58.093 34.615 0.00 0.00 0.00 2.32
585 607 7.819415 TCTTCTGGACAGTACAAGATACATTTG 59.181 37.037 0.00 0.00 0.00 2.32
586 608 6.406370 TCTGGACAGTACAAGATACATTTGG 58.594 40.000 0.00 0.00 0.00 3.28
587 609 6.013725 TCTGGACAGTACAAGATACATTTGGT 60.014 38.462 0.00 0.00 0.00 3.67
588 610 6.170506 TGGACAGTACAAGATACATTTGGTC 58.829 40.000 0.00 0.00 0.00 4.02
589 611 6.013725 TGGACAGTACAAGATACATTTGGTCT 60.014 38.462 0.00 0.00 0.00 3.85
590 612 6.313905 GGACAGTACAAGATACATTTGGTCTG 59.686 42.308 0.00 0.00 36.91 3.51
591 613 6.769512 ACAGTACAAGATACATTTGGTCTGT 58.230 36.000 0.00 9.63 38.01 3.41
592 614 7.224297 ACAGTACAAGATACATTTGGTCTGTT 58.776 34.615 0.00 0.00 38.79 3.16
593 615 7.719633 ACAGTACAAGATACATTTGGTCTGTTT 59.280 33.333 0.00 0.00 38.79 2.83
594 616 8.230486 CAGTACAAGATACATTTGGTCTGTTTC 58.770 37.037 0.00 0.00 31.86 2.78
595 617 7.936847 AGTACAAGATACATTTGGTCTGTTTCA 59.063 33.333 0.00 0.00 30.03 2.69
596 618 7.581213 ACAAGATACATTTGGTCTGTTTCAA 57.419 32.000 0.00 0.00 30.03 2.69
597 619 8.006298 ACAAGATACATTTGGTCTGTTTCAAA 57.994 30.769 0.00 0.00 37.29 2.69
598 620 8.641541 ACAAGATACATTTGGTCTGTTTCAAAT 58.358 29.630 0.00 0.00 42.28 2.32
626 648 7.766219 AAATATGTAATATACGATCGGTGCC 57.234 36.000 20.98 0.96 38.94 5.01
627 649 4.794278 ATGTAATATACGATCGGTGCCA 57.206 40.909 20.98 6.77 0.00 4.92
628 650 4.587584 TGTAATATACGATCGGTGCCAA 57.412 40.909 20.98 0.00 0.00 4.52
629 651 4.946445 TGTAATATACGATCGGTGCCAAA 58.054 39.130 20.98 0.00 0.00 3.28
630 652 5.358090 TGTAATATACGATCGGTGCCAAAA 58.642 37.500 20.98 0.00 0.00 2.44
631 653 5.992829 TGTAATATACGATCGGTGCCAAAAT 59.007 36.000 20.98 0.00 0.00 1.82
632 654 6.483974 TGTAATATACGATCGGTGCCAAAATT 59.516 34.615 20.98 9.37 0.00 1.82
633 655 6.385649 AATATACGATCGGTGCCAAAATTT 57.614 33.333 20.98 0.00 0.00 1.82
634 656 2.629639 ACGATCGGTGCCAAAATTTC 57.370 45.000 20.98 0.00 0.00 2.17
635 657 2.159382 ACGATCGGTGCCAAAATTTCT 58.841 42.857 20.98 0.00 0.00 2.52
636 658 3.340034 ACGATCGGTGCCAAAATTTCTA 58.660 40.909 20.98 0.00 0.00 2.10
637 659 3.945285 ACGATCGGTGCCAAAATTTCTAT 59.055 39.130 20.98 0.00 0.00 1.98
638 660 4.035208 ACGATCGGTGCCAAAATTTCTATC 59.965 41.667 20.98 0.00 0.00 2.08
639 661 4.273480 CGATCGGTGCCAAAATTTCTATCT 59.727 41.667 7.38 0.00 0.00 1.98
640 662 5.559035 CGATCGGTGCCAAAATTTCTATCTC 60.559 44.000 7.38 0.00 0.00 2.75
641 663 4.584874 TCGGTGCCAAAATTTCTATCTCA 58.415 39.130 0.00 0.00 0.00 3.27
642 664 4.635765 TCGGTGCCAAAATTTCTATCTCAG 59.364 41.667 0.00 0.00 0.00 3.35
643 665 4.396166 CGGTGCCAAAATTTCTATCTCAGT 59.604 41.667 0.00 0.00 0.00 3.41
644 666 5.106157 CGGTGCCAAAATTTCTATCTCAGTT 60.106 40.000 0.00 0.00 0.00 3.16
645 667 6.325596 GGTGCCAAAATTTCTATCTCAGTTC 58.674 40.000 0.00 0.00 0.00 3.01
646 668 6.071952 GGTGCCAAAATTTCTATCTCAGTTCA 60.072 38.462 0.00 0.00 0.00 3.18
647 669 6.803807 GTGCCAAAATTTCTATCTCAGTTCAC 59.196 38.462 0.00 0.00 0.00 3.18
648 670 6.489700 TGCCAAAATTTCTATCTCAGTTCACA 59.510 34.615 0.00 0.00 0.00 3.58
649 671 7.014134 TGCCAAAATTTCTATCTCAGTTCACAA 59.986 33.333 0.00 0.00 0.00 3.33
650 672 7.867403 GCCAAAATTTCTATCTCAGTTCACAAA 59.133 33.333 0.00 0.00 0.00 2.83
651 673 9.918630 CCAAAATTTCTATCTCAGTTCACAAAT 57.081 29.630 0.00 0.00 0.00 2.32
655 677 8.970859 ATTTCTATCTCAGTTCACAAATAGGG 57.029 34.615 0.00 0.00 0.00 3.53
656 678 7.496346 TTCTATCTCAGTTCACAAATAGGGT 57.504 36.000 0.00 0.00 0.00 4.34
657 679 6.878317 TCTATCTCAGTTCACAAATAGGGTG 58.122 40.000 0.00 0.00 37.60 4.61
658 680 3.674997 TCTCAGTTCACAAATAGGGTGC 58.325 45.455 0.00 0.00 36.22 5.01
659 681 3.327757 TCTCAGTTCACAAATAGGGTGCT 59.672 43.478 0.00 0.00 36.22 4.40
660 682 3.674997 TCAGTTCACAAATAGGGTGCTC 58.325 45.455 0.00 0.00 36.22 4.26
661 683 3.327757 TCAGTTCACAAATAGGGTGCTCT 59.672 43.478 0.00 0.00 36.22 4.09
662 684 4.530553 TCAGTTCACAAATAGGGTGCTCTA 59.469 41.667 0.00 0.00 36.22 2.43
663 685 4.631813 CAGTTCACAAATAGGGTGCTCTAC 59.368 45.833 0.00 0.00 36.22 2.59
664 686 4.532521 AGTTCACAAATAGGGTGCTCTACT 59.467 41.667 0.00 0.00 36.22 2.57
665 687 5.720041 AGTTCACAAATAGGGTGCTCTACTA 59.280 40.000 0.00 0.00 36.22 1.82
666 688 5.593679 TCACAAATAGGGTGCTCTACTAC 57.406 43.478 0.00 0.00 36.22 2.73
667 689 5.269991 TCACAAATAGGGTGCTCTACTACT 58.730 41.667 0.00 0.00 36.22 2.57
668 690 5.127194 TCACAAATAGGGTGCTCTACTACTG 59.873 44.000 0.00 0.00 36.22 2.74
669 691 4.406003 ACAAATAGGGTGCTCTACTACTGG 59.594 45.833 0.00 0.00 0.00 4.00
670 692 2.750141 TAGGGTGCTCTACTACTGGG 57.250 55.000 0.00 0.00 0.00 4.45
671 693 0.711184 AGGGTGCTCTACTACTGGGT 59.289 55.000 0.00 0.00 0.00 4.51
672 694 1.112950 GGGTGCTCTACTACTGGGTC 58.887 60.000 0.00 0.00 0.00 4.46
673 695 1.618888 GGGTGCTCTACTACTGGGTCA 60.619 57.143 0.00 0.00 0.00 4.02
674 696 1.477295 GGTGCTCTACTACTGGGTCAC 59.523 57.143 0.00 0.00 0.00 3.67
675 697 2.168496 GTGCTCTACTACTGGGTCACA 58.832 52.381 0.00 0.00 0.00 3.58
676 698 2.561419 GTGCTCTACTACTGGGTCACAA 59.439 50.000 0.00 0.00 0.00 3.33
677 699 3.006537 GTGCTCTACTACTGGGTCACAAA 59.993 47.826 0.00 0.00 0.00 2.83
678 700 3.644265 TGCTCTACTACTGGGTCACAAAA 59.356 43.478 0.00 0.00 0.00 2.44
679 701 4.101898 TGCTCTACTACTGGGTCACAAAAA 59.898 41.667 0.00 0.00 0.00 1.94
680 702 5.221843 TGCTCTACTACTGGGTCACAAAAAT 60.222 40.000 0.00 0.00 0.00 1.82
681 703 5.122396 GCTCTACTACTGGGTCACAAAAATG 59.878 44.000 0.00 0.00 0.00 2.32
682 704 6.182507 TCTACTACTGGGTCACAAAAATGT 57.817 37.500 0.00 0.00 0.00 2.71
683 705 6.228258 TCTACTACTGGGTCACAAAAATGTC 58.772 40.000 0.00 0.00 0.00 3.06
684 706 4.142038 ACTACTGGGTCACAAAAATGTCC 58.858 43.478 0.00 0.00 0.00 4.02
685 707 3.312736 ACTGGGTCACAAAAATGTCCT 57.687 42.857 0.00 0.00 0.00 3.85
686 708 4.447138 ACTGGGTCACAAAAATGTCCTA 57.553 40.909 0.00 0.00 0.00 2.94
687 709 4.998051 ACTGGGTCACAAAAATGTCCTAT 58.002 39.130 0.00 0.00 0.00 2.57
688 710 5.393866 ACTGGGTCACAAAAATGTCCTATT 58.606 37.500 0.00 0.00 0.00 1.73
689 711 5.838521 ACTGGGTCACAAAAATGTCCTATTT 59.161 36.000 0.00 0.00 0.00 1.40
690 712 6.326323 ACTGGGTCACAAAAATGTCCTATTTT 59.674 34.615 0.00 0.00 33.12 1.82
691 713 6.520272 TGGGTCACAAAAATGTCCTATTTTG 58.480 36.000 8.87 8.87 46.71 2.44
692 714 5.408299 GGGTCACAAAAATGTCCTATTTTGC 59.592 40.000 10.04 0.00 45.76 3.68
693 715 6.223120 GGTCACAAAAATGTCCTATTTTGCT 58.777 36.000 10.04 0.00 45.76 3.91
694 716 7.375053 GGTCACAAAAATGTCCTATTTTGCTA 58.625 34.615 10.04 0.00 45.76 3.49
695 717 7.870445 GGTCACAAAAATGTCCTATTTTGCTAA 59.130 33.333 10.04 0.00 45.76 3.09
696 718 8.699749 GTCACAAAAATGTCCTATTTTGCTAAC 58.300 33.333 10.04 4.06 45.76 2.34
697 719 7.593273 TCACAAAAATGTCCTATTTTGCTAACG 59.407 33.333 10.04 0.00 45.76 3.18
698 720 7.593273 CACAAAAATGTCCTATTTTGCTAACGA 59.407 33.333 10.04 0.00 45.76 3.85
699 721 8.303876 ACAAAAATGTCCTATTTTGCTAACGAT 58.696 29.630 10.04 0.00 45.76 3.73
700 722 9.139174 CAAAAATGTCCTATTTTGCTAACGATT 57.861 29.630 0.00 0.00 39.01 3.34
701 723 9.705290 AAAAATGTCCTATTTTGCTAACGATTT 57.295 25.926 0.00 0.00 32.23 2.17
702 724 8.911247 AAATGTCCTATTTTGCTAACGATTTC 57.089 30.769 0.00 0.00 0.00 2.17
703 725 7.624360 ATGTCCTATTTTGCTAACGATTTCA 57.376 32.000 0.00 0.00 0.00 2.69
704 726 7.441890 TGTCCTATTTTGCTAACGATTTCAA 57.558 32.000 0.00 0.00 0.00 2.69
705 727 7.877003 TGTCCTATTTTGCTAACGATTTCAAA 58.123 30.769 0.00 0.00 0.00 2.69
706 728 8.353684 TGTCCTATTTTGCTAACGATTTCAAAA 58.646 29.630 10.72 10.72 40.99 2.44
707 729 9.187455 GTCCTATTTTGCTAACGATTTCAAAAA 57.813 29.630 11.75 0.00 40.40 1.94
708 730 9.921637 TCCTATTTTGCTAACGATTTCAAAAAT 57.078 25.926 11.75 0.00 40.40 1.82
736 758 9.964253 GTTAGATGTTAAAGCATGATATGATCG 57.036 33.333 0.00 0.00 0.00 3.69
737 759 7.606858 AGATGTTAAAGCATGATATGATCGG 57.393 36.000 0.00 0.00 0.00 4.18
738 760 7.389232 AGATGTTAAAGCATGATATGATCGGA 58.611 34.615 0.00 0.00 0.00 4.55
739 761 7.548427 AGATGTTAAAGCATGATATGATCGGAG 59.452 37.037 0.00 0.00 0.00 4.63
740 762 6.758254 TGTTAAAGCATGATATGATCGGAGA 58.242 36.000 0.00 0.00 45.75 3.71
741 763 6.870439 TGTTAAAGCATGATATGATCGGAGAG 59.130 38.462 0.00 0.00 43.63 3.20
742 764 4.468765 AAGCATGATATGATCGGAGAGG 57.531 45.455 0.00 0.00 43.63 3.69
743 765 3.439154 AGCATGATATGATCGGAGAGGT 58.561 45.455 0.00 0.00 43.63 3.85
744 766 3.837146 AGCATGATATGATCGGAGAGGTT 59.163 43.478 0.00 0.00 43.63 3.50
745 767 4.081752 AGCATGATATGATCGGAGAGGTTC 60.082 45.833 0.00 0.00 43.63 3.62
746 768 4.753233 CATGATATGATCGGAGAGGTTCC 58.247 47.826 0.00 0.00 43.63 3.62
754 776 3.239861 GGAGAGGTTCCAGCTGTTG 57.760 57.895 13.81 0.00 46.01 3.33
755 777 0.687354 GGAGAGGTTCCAGCTGTTGA 59.313 55.000 13.81 0.01 46.01 3.18
756 778 1.280421 GGAGAGGTTCCAGCTGTTGAT 59.720 52.381 13.81 0.00 46.01 2.57
757 779 2.290577 GGAGAGGTTCCAGCTGTTGATT 60.291 50.000 13.81 0.00 46.01 2.57
758 780 3.055094 GGAGAGGTTCCAGCTGTTGATTA 60.055 47.826 13.81 0.00 46.01 1.75
759 781 4.384647 GGAGAGGTTCCAGCTGTTGATTAT 60.385 45.833 13.81 0.00 46.01 1.28
760 782 4.775236 AGAGGTTCCAGCTGTTGATTATC 58.225 43.478 13.81 1.97 0.00 1.75
761 783 4.472833 AGAGGTTCCAGCTGTTGATTATCT 59.527 41.667 13.81 4.30 0.00 1.98
762 784 4.775236 AGGTTCCAGCTGTTGATTATCTC 58.225 43.478 13.81 0.00 0.00 2.75
763 785 3.557595 GGTTCCAGCTGTTGATTATCTCG 59.442 47.826 13.81 0.00 0.00 4.04
764 786 2.826428 TCCAGCTGTTGATTATCTCGC 58.174 47.619 13.81 0.00 0.00 5.03
765 787 2.168313 TCCAGCTGTTGATTATCTCGCA 59.832 45.455 13.81 0.00 0.00 5.10
766 788 2.543012 CCAGCTGTTGATTATCTCGCAG 59.457 50.000 13.81 1.09 34.51 5.18
767 789 3.193263 CAGCTGTTGATTATCTCGCAGT 58.807 45.455 5.25 0.44 34.14 4.40
768 790 3.620374 CAGCTGTTGATTATCTCGCAGTT 59.380 43.478 5.25 4.81 34.14 3.16
769 791 3.868077 AGCTGTTGATTATCTCGCAGTTC 59.132 43.478 10.73 0.36 34.14 3.01
770 792 3.868077 GCTGTTGATTATCTCGCAGTTCT 59.132 43.478 10.73 0.00 34.14 3.01
771 793 4.026145 GCTGTTGATTATCTCGCAGTTCTC 60.026 45.833 10.73 0.00 34.14 2.87
772 794 5.330455 TGTTGATTATCTCGCAGTTCTCT 57.670 39.130 0.00 0.00 0.00 3.10
773 795 5.724328 TGTTGATTATCTCGCAGTTCTCTT 58.276 37.500 0.00 0.00 0.00 2.85
774 796 6.166279 TGTTGATTATCTCGCAGTTCTCTTT 58.834 36.000 0.00 0.00 0.00 2.52
775 797 6.650807 TGTTGATTATCTCGCAGTTCTCTTTT 59.349 34.615 0.00 0.00 0.00 2.27
776 798 7.817478 TGTTGATTATCTCGCAGTTCTCTTTTA 59.183 33.333 0.00 0.00 0.00 1.52
777 799 7.993821 TGATTATCTCGCAGTTCTCTTTTAG 57.006 36.000 0.00 0.00 0.00 1.85
778 800 6.477033 TGATTATCTCGCAGTTCTCTTTTAGC 59.523 38.462 0.00 0.00 0.00 3.09
779 801 3.944055 TCTCGCAGTTCTCTTTTAGCT 57.056 42.857 0.00 0.00 0.00 3.32
780 802 3.579709 TCTCGCAGTTCTCTTTTAGCTG 58.420 45.455 0.00 0.00 0.00 4.24
781 803 3.005897 TCTCGCAGTTCTCTTTTAGCTGT 59.994 43.478 0.00 0.00 0.00 4.40
782 804 3.728845 TCGCAGTTCTCTTTTAGCTGTT 58.271 40.909 0.00 0.00 0.00 3.16
783 805 3.741344 TCGCAGTTCTCTTTTAGCTGTTC 59.259 43.478 0.00 0.00 0.00 3.18
784 806 3.120511 CGCAGTTCTCTTTTAGCTGTTCC 60.121 47.826 0.00 0.00 0.00 3.62
785 807 4.068599 GCAGTTCTCTTTTAGCTGTTCCT 58.931 43.478 0.00 0.00 0.00 3.36
786 808 4.517075 GCAGTTCTCTTTTAGCTGTTCCTT 59.483 41.667 0.00 0.00 0.00 3.36
787 809 5.009110 GCAGTTCTCTTTTAGCTGTTCCTTT 59.991 40.000 0.00 0.00 0.00 3.11
788 810 6.460261 GCAGTTCTCTTTTAGCTGTTCCTTTT 60.460 38.462 0.00 0.00 0.00 2.27
789 811 7.484140 CAGTTCTCTTTTAGCTGTTCCTTTTT 58.516 34.615 0.00 0.00 0.00 1.94
808 830 3.971245 TTTGTGGTTTGCCTTTGTTCT 57.029 38.095 0.00 0.00 35.27 3.01
809 831 3.971245 TTGTGGTTTGCCTTTGTTCTT 57.029 38.095 0.00 0.00 35.27 2.52
810 832 3.971245 TGTGGTTTGCCTTTGTTCTTT 57.029 38.095 0.00 0.00 35.27 2.52
811 833 4.278975 TGTGGTTTGCCTTTGTTCTTTT 57.721 36.364 0.00 0.00 35.27 2.27
812 834 3.999663 TGTGGTTTGCCTTTGTTCTTTTG 59.000 39.130 0.00 0.00 35.27 2.44
813 835 4.000325 GTGGTTTGCCTTTGTTCTTTTGT 59.000 39.130 0.00 0.00 35.27 2.83
814 836 4.092821 GTGGTTTGCCTTTGTTCTTTTGTC 59.907 41.667 0.00 0.00 35.27 3.18
815 837 4.020662 TGGTTTGCCTTTGTTCTTTTGTCT 60.021 37.500 0.00 0.00 35.27 3.41
816 838 4.329801 GGTTTGCCTTTGTTCTTTTGTCTG 59.670 41.667 0.00 0.00 0.00 3.51
817 839 3.799281 TGCCTTTGTTCTTTTGTCTGG 57.201 42.857 0.00 0.00 0.00 3.86
818 840 3.096092 TGCCTTTGTTCTTTTGTCTGGT 58.904 40.909 0.00 0.00 0.00 4.00
819 841 3.513515 TGCCTTTGTTCTTTTGTCTGGTT 59.486 39.130 0.00 0.00 0.00 3.67
820 842 4.112634 GCCTTTGTTCTTTTGTCTGGTTC 58.887 43.478 0.00 0.00 0.00 3.62
821 843 4.142160 GCCTTTGTTCTTTTGTCTGGTTCT 60.142 41.667 0.00 0.00 0.00 3.01
822 844 5.624509 GCCTTTGTTCTTTTGTCTGGTTCTT 60.625 40.000 0.00 0.00 0.00 2.52
823 845 5.807011 CCTTTGTTCTTTTGTCTGGTTCTTG 59.193 40.000 0.00 0.00 0.00 3.02
824 846 5.975693 TTGTTCTTTTGTCTGGTTCTTGT 57.024 34.783 0.00 0.00 0.00 3.16
825 847 5.975693 TGTTCTTTTGTCTGGTTCTTGTT 57.024 34.783 0.00 0.00 0.00 2.83
826 848 5.708948 TGTTCTTTTGTCTGGTTCTTGTTG 58.291 37.500 0.00 0.00 0.00 3.33
827 849 5.475220 TGTTCTTTTGTCTGGTTCTTGTTGA 59.525 36.000 0.00 0.00 0.00 3.18
828 850 6.152661 TGTTCTTTTGTCTGGTTCTTGTTGAT 59.847 34.615 0.00 0.00 0.00 2.57
829 851 6.377327 TCTTTTGTCTGGTTCTTGTTGATC 57.623 37.500 0.00 0.00 0.00 2.92
830 852 5.299279 TCTTTTGTCTGGTTCTTGTTGATCC 59.701 40.000 0.00 0.00 35.59 3.36
831 853 4.437682 TTGTCTGGTTCTTGTTGATCCT 57.562 40.909 0.00 0.00 35.94 3.24
832 854 4.437682 TGTCTGGTTCTTGTTGATCCTT 57.562 40.909 0.00 0.00 35.94 3.36
833 855 4.389374 TGTCTGGTTCTTGTTGATCCTTC 58.611 43.478 0.00 0.00 35.94 3.46
834 856 4.103153 TGTCTGGTTCTTGTTGATCCTTCT 59.897 41.667 0.00 0.00 35.94 2.85
835 857 5.306937 TGTCTGGTTCTTGTTGATCCTTCTA 59.693 40.000 0.00 0.00 35.94 2.10
836 858 6.013379 TGTCTGGTTCTTGTTGATCCTTCTAT 60.013 38.462 0.00 0.00 35.94 1.98
837 859 6.881602 GTCTGGTTCTTGTTGATCCTTCTATT 59.118 38.462 0.00 0.00 35.94 1.73
838 860 7.391833 GTCTGGTTCTTGTTGATCCTTCTATTT 59.608 37.037 0.00 0.00 35.94 1.40
839 861 7.944554 TCTGGTTCTTGTTGATCCTTCTATTTT 59.055 33.333 0.00 0.00 35.94 1.82
840 862 8.477419 TGGTTCTTGTTGATCCTTCTATTTTT 57.523 30.769 0.00 0.00 35.94 1.94
841 863 8.576442 TGGTTCTTGTTGATCCTTCTATTTTTC 58.424 33.333 0.00 0.00 35.94 2.29
842 864 7.750903 GGTTCTTGTTGATCCTTCTATTTTTCG 59.249 37.037 0.00 0.00 32.98 3.46
843 865 7.979444 TCTTGTTGATCCTTCTATTTTTCGT 57.021 32.000 0.00 0.00 0.00 3.85
844 866 9.496873 TTCTTGTTGATCCTTCTATTTTTCGTA 57.503 29.630 0.00 0.00 0.00 3.43
845 867 8.932791 TCTTGTTGATCCTTCTATTTTTCGTAC 58.067 33.333 0.00 0.00 0.00 3.67
846 868 8.842358 TTGTTGATCCTTCTATTTTTCGTACT 57.158 30.769 0.00 0.00 0.00 2.73
847 869 9.932207 TTGTTGATCCTTCTATTTTTCGTACTA 57.068 29.630 0.00 0.00 0.00 1.82
890 912 7.916077 TAGGAAACCTAAGCTTAGAATAGCT 57.084 36.000 30.92 11.48 43.25 3.32
902 924 7.247456 GCTTAGAATAGCTTATTCCCCTAGT 57.753 40.000 0.00 0.00 44.35 2.57
903 925 8.363761 GCTTAGAATAGCTTATTCCCCTAGTA 57.636 38.462 0.00 0.00 44.35 1.82
904 926 8.813951 GCTTAGAATAGCTTATTCCCCTAGTAA 58.186 37.037 0.00 0.00 44.35 2.24
908 930 8.999895 AGAATAGCTTATTCCCCTAGTAAAACA 58.000 33.333 0.00 0.00 44.35 2.83
909 931 9.274206 GAATAGCTTATTCCCCTAGTAAAACAG 57.726 37.037 0.00 0.00 38.85 3.16
910 932 6.638021 AGCTTATTCCCCTAGTAAAACAGT 57.362 37.500 0.00 0.00 0.00 3.55
911 933 7.744678 AGCTTATTCCCCTAGTAAAACAGTA 57.255 36.000 0.00 0.00 0.00 2.74
912 934 7.563020 AGCTTATTCCCCTAGTAAAACAGTAC 58.437 38.462 0.00 0.00 0.00 2.73
1142 1383 9.844790 TGCACTGTTGATATTTCTTTATTTCAG 57.155 29.630 0.00 0.00 0.00 3.02
1241 1482 6.589523 GTGCTATCTGCTATGTTCTATCTTGG 59.410 42.308 0.00 0.00 43.37 3.61
1242 1483 6.494835 TGCTATCTGCTATGTTCTATCTTGGA 59.505 38.462 0.00 0.00 43.37 3.53
1267 1515 6.995091 ACTAGGAATAGCCAGCTTTCATAAAG 59.005 38.462 0.00 0.00 39.36 1.85
1375 1626 1.271926 GCTCAGGTGGGGTTACATGTT 60.272 52.381 2.30 0.00 34.26 2.71
1432 1683 4.854173 ACTTGTTGGCCCAAGAAATTTTT 58.146 34.783 23.69 1.82 43.65 1.94
1622 1884 3.953612 TCGGTACATAGGTATGTCGGTTT 59.046 43.478 5.90 0.00 45.11 3.27
1667 1929 3.243367 GGTTTATGTGTGTGCTGCAAAGA 60.243 43.478 2.77 0.00 0.00 2.52
1697 1960 5.925509 TCCTTGTATTTCATAGTGGTAGGC 58.074 41.667 0.00 0.00 0.00 3.93
1815 2083 6.047870 GCTACCTTAGTTTCTAAGGCTTACC 58.952 44.000 26.03 12.61 46.05 2.85
2146 2414 8.135529 TCGACTGGTAAGAAGTATATTGATGTG 58.864 37.037 0.00 0.00 0.00 3.21
2147 2415 7.382488 CGACTGGTAAGAAGTATATTGATGTGG 59.618 40.741 0.00 0.00 0.00 4.17
2149 2417 8.424918 ACTGGTAAGAAGTATATTGATGTGGAG 58.575 37.037 0.00 0.00 0.00 3.86
2635 2953 2.900716 TGCGCCAGCTATAATGTGTA 57.099 45.000 4.18 0.00 45.42 2.90
2719 3037 7.013464 TGGTATTAAATTTGTCCGTCAACAAGT 59.987 33.333 0.00 0.00 40.08 3.16
2737 3055 7.698836 AACAAGTGCTTCAATGTTGATTTAC 57.301 32.000 0.00 0.00 37.00 2.01
2808 3126 6.946340 TGACACTCAAGAAGCTAAATCCATA 58.054 36.000 0.00 0.00 0.00 2.74
2992 3310 1.029947 AAAATGGGGCTAGCGTTCCG 61.030 55.000 9.00 0.00 0.00 4.30
3063 3381 7.042797 TCAAGAAATGTTCTAAAGCTTTGCT 57.957 32.000 22.02 0.00 39.00 3.91
3117 3435 4.588951 ACTTAGTCCACACTGAATGACTCA 59.411 41.667 0.00 0.00 38.85 3.41
3347 3666 3.393800 ACACACCAGATTCTTCAAGTCG 58.606 45.455 0.00 0.00 0.00 4.18
3595 3928 4.516652 CAGATTCTTCTGGGATTCCCTT 57.483 45.455 22.38 0.00 45.70 3.95
3597 3930 6.006275 CAGATTCTTCTGGGATTCCCTTAA 57.994 41.667 22.38 14.56 45.70 1.85
3598 3931 6.060788 CAGATTCTTCTGGGATTCCCTTAAG 58.939 44.000 22.38 21.89 45.70 1.85
3601 3934 5.860648 TCTTCTGGGATTCCCTTAAGTTT 57.139 39.130 22.38 0.00 45.70 2.66
3603 3936 4.586306 TCTGGGATTCCCTTAAGTTTCC 57.414 45.455 22.38 2.23 45.70 3.13
3860 4194 6.997655 TGTGTTATGAAGAAGACACTGAGAT 58.002 36.000 6.97 0.00 42.09 2.75
3864 4198 3.320626 TGAAGAAGACACTGAGATTGCG 58.679 45.455 0.00 0.00 0.00 4.85
4083 4418 6.070021 TGAGGAGAATAAGAAATGAGAGGCAA 60.070 38.462 0.00 0.00 0.00 4.52
4200 4536 5.942872 AGGATTTGTTAGCAACTGAATTCG 58.057 37.500 0.04 0.00 33.82 3.34
4282 4618 3.145286 TCATGTTTGAGGCATCGTCAAA 58.855 40.909 9.69 9.69 43.01 2.69
4323 4659 1.298157 TGAGAATTGCCAACGAGCCG 61.298 55.000 0.00 0.00 0.00 5.52
4350 4686 0.814457 GAGTGCACATCGTCTCCTCT 59.186 55.000 21.04 0.00 0.00 3.69
4351 4687 0.814457 AGTGCACATCGTCTCCTCTC 59.186 55.000 21.04 0.00 0.00 3.20
4364 4700 2.983192 TCTCCTCTCGGTCCTAGATCAT 59.017 50.000 0.00 0.00 0.00 2.45
4369 4705 3.223435 TCTCGGTCCTAGATCATTGACC 58.777 50.000 14.33 14.33 43.07 4.02
4477 4815 2.419673 GCTGTACAACATGCATGCTGTA 59.580 45.455 30.00 30.00 38.06 2.74
4608 4972 2.083774 TCGGCAATAAAAGTCTGCTGG 58.916 47.619 2.52 0.00 41.78 4.85
4610 4974 1.821136 GGCAATAAAAGTCTGCTGGCT 59.179 47.619 0.00 0.00 36.32 4.75
4648 5012 2.284754 TGCAGACTAAATTGCACCCA 57.715 45.000 0.00 0.00 44.72 4.51
4879 5244 2.097978 AATAGGATGGGGGCCATGGC 62.098 60.000 29.47 29.47 45.26 4.40
4905 5270 4.056050 GTCAAGAGTGTTATGGTCGTTGT 58.944 43.478 0.00 0.00 0.00 3.32
4950 5315 2.037641 TGAACACTAGCATGCAGTGAGT 59.962 45.455 35.74 27.53 45.10 3.41
4958 5323 0.179062 CATGCAGTGAGTCCTAGGGC 60.179 60.000 4.79 4.79 0.00 5.19
5058 5423 4.101119 AGTGGATGGTATTTACTTCCTCCG 59.899 45.833 9.87 0.00 32.97 4.63
5062 5427 6.156602 TGGATGGTATTTACTTCCTCCGTTTA 59.843 38.462 9.87 0.00 32.97 2.01
5149 5582 4.074970 AGGAAGTAATTGACAGTGGCAAG 58.925 43.478 18.08 0.00 0.00 4.01
5184 5625 4.497300 GCAATGGCATCTACAAATTGTGT 58.503 39.130 9.15 0.00 41.41 3.72
5225 5669 5.586243 TGCTTTTACTGATTCTGCATACCTC 59.414 40.000 0.00 0.00 0.00 3.85
5329 5773 2.046447 TCCCCCAAATCTCCTCTTCTCT 59.954 50.000 0.00 0.00 0.00 3.10
5382 5828 6.631016 TCACTATCTTGTTAAGTAGCACTGG 58.369 40.000 0.00 0.00 0.00 4.00
5553 5999 7.495901 AGTACTCATAGTTCCACATCATCTTG 58.504 38.462 0.00 0.00 0.00 3.02
5558 6004 4.581309 AGTTCCACATCATCTTGGTGAT 57.419 40.909 0.00 0.00 39.34 3.06
5674 6120 2.472695 TTTCATCCACGACAGGAAGG 57.527 50.000 0.00 0.00 41.92 3.46
5801 6249 1.356124 ATCTCAACCACTCTGGCACT 58.644 50.000 0.00 0.00 42.67 4.40
5975 6426 1.683385 CCATGTAGCAGATGGACGAGA 59.317 52.381 6.50 0.00 42.81 4.04
6008 6459 4.043859 ACCAGCCGGTGTATAGCA 57.956 55.556 1.90 0.00 46.79 3.49
6151 6615 0.886563 GAGCAGCCAAGCAACTCAAT 59.113 50.000 0.00 0.00 34.44 2.57
6289 6762 2.236766 GGCTGCATAGGATCATTGCTT 58.763 47.619 0.50 0.00 37.28 3.91
6314 6787 2.049767 TCCTGCAGCGTGACCGATA 61.050 57.895 8.66 0.00 35.63 2.92
6403 6876 9.829507 TTTTCAGACCACACATTTATTGAATTT 57.170 25.926 0.00 0.00 0.00 1.82
6407 6880 9.357652 CAGACCACACATTTATTGAATTTTAGG 57.642 33.333 0.00 0.00 0.00 2.69
6412 6885 9.573133 CACACATTTATTGAATTTTAGGGACTC 57.427 33.333 0.00 0.00 41.75 3.36
6423 6896 7.174946 TGAATTTTAGGGACTCAGTGTTTGATC 59.825 37.037 0.00 0.00 41.75 2.92
6449 6922 5.823861 ATTGGGGATTTGCTTTGTAAGTT 57.176 34.783 0.00 0.00 0.00 2.66
6450 6923 6.926630 ATTGGGGATTTGCTTTGTAAGTTA 57.073 33.333 0.00 0.00 0.00 2.24
6464 6938 4.695396 TGTAAGTTAGCCGAGTTGAAACA 58.305 39.130 0.00 0.00 0.00 2.83
6494 6968 5.192927 ACTGAGTTCCACAAATGAAGTGAA 58.807 37.500 0.00 0.00 39.30 3.18
6504 6978 2.533266 ATGAAGTGAACGACAGCAGT 57.467 45.000 0.00 0.00 0.00 4.40
6556 7039 1.290203 CTCAACCCGTGATTCATCGG 58.710 55.000 16.10 16.10 45.42 4.18
6816 7384 5.050644 TCATGAACATGTGAAATGCAGAC 57.949 39.130 13.35 0.00 39.72 3.51
6964 7532 4.883006 ACTTCGTAGGTTCAGAGGAGTATC 59.117 45.833 0.00 0.00 0.00 2.24
6981 7549 5.473931 GAGTATCAAGAACTTGCTGACTGA 58.526 41.667 15.13 0.00 40.24 3.41
7022 7590 2.012673 GATTGGTGCTGCCTAGACTTG 58.987 52.381 0.00 0.00 38.35 3.16
7102 7670 8.803799 TGTTTTCTTTTACTTGCGATTTCTTTC 58.196 29.630 0.00 0.00 0.00 2.62
7439 8024 5.056553 ACTGTTGGCCTTACTTTTAGGAA 57.943 39.130 3.32 0.00 34.56 3.36
7637 8237 5.536538 TGCACCACTTCACCAAATTATTGTA 59.463 36.000 0.00 0.00 34.60 2.41
7638 8238 5.861787 GCACCACTTCACCAAATTATTGTAC 59.138 40.000 0.00 0.00 34.60 2.90
7651 8251 9.691362 CCAAATTATTGTACACAAGCTAGTTTT 57.309 29.630 0.00 0.00 39.47 2.43
7749 8349 5.221461 CCTTTAGGCACGATACCTAGAATGT 60.221 44.000 0.00 0.00 40.80 2.71
7800 8400 1.418637 GGGTGTGGTCTCAGGTTGTAA 59.581 52.381 0.00 0.00 0.00 2.41
7936 10563 4.675063 ATCCCAAAACAGGTCCTTACAT 57.325 40.909 0.00 0.00 0.00 2.29
7944 10571 7.360361 CAAAACAGGTCCTTACATGAGTTTAC 58.640 38.462 0.00 0.00 39.79 2.01
7954 10581 9.213777 TCCTTACATGAGTTTACATAATCCTCT 57.786 33.333 0.00 0.00 0.00 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.505048 AAATGACATGGTCCTCTATCATCA 57.495 37.500 0.00 0.00 0.00 3.07
1 2 6.293845 GCAAAATGACATGGTCCTCTATCATC 60.294 42.308 0.00 0.00 0.00 2.92
39 40 9.424319 GTGTCTATTTTCAGAAGTCAATACTGA 57.576 33.333 0.00 0.00 38.61 3.41
40 41 9.429359 AGTGTCTATTTTCAGAAGTCAATACTG 57.571 33.333 0.00 0.00 35.62 2.74
44 45 8.598041 AGGTAGTGTCTATTTTCAGAAGTCAAT 58.402 33.333 0.00 0.00 0.00 2.57
45 46 7.872993 CAGGTAGTGTCTATTTTCAGAAGTCAA 59.127 37.037 0.00 0.00 0.00 3.18
46 47 7.232737 TCAGGTAGTGTCTATTTTCAGAAGTCA 59.767 37.037 0.00 0.00 0.00 3.41
47 48 7.603651 TCAGGTAGTGTCTATTTTCAGAAGTC 58.396 38.462 0.00 0.00 0.00 3.01
48 49 7.540474 TCAGGTAGTGTCTATTTTCAGAAGT 57.460 36.000 0.00 0.00 0.00 3.01
52 66 6.763610 GGGAATCAGGTAGTGTCTATTTTCAG 59.236 42.308 0.00 0.00 0.00 3.02
54 68 6.890293 AGGGAATCAGGTAGTGTCTATTTTC 58.110 40.000 0.00 0.00 0.00 2.29
66 80 3.201487 TCAGACTACGAGGGAATCAGGTA 59.799 47.826 0.00 0.00 0.00 3.08
72 86 4.527038 TCAAAAGTCAGACTACGAGGGAAT 59.473 41.667 2.64 0.00 0.00 3.01
80 94 4.875561 AGGTCCTCAAAAGTCAGACTAC 57.124 45.455 2.64 0.00 0.00 2.73
151 167 9.624373 AACATGAATGATAGAAATGAAGTAGCT 57.376 29.630 0.00 0.00 0.00 3.32
233 249 1.805120 CGCGTCCACCTATACCAAAGG 60.805 57.143 0.00 0.00 40.20 3.11
239 255 2.116787 GACTTCGCGTCCACCTATAC 57.883 55.000 5.77 0.00 36.62 1.47
313 329 2.576615 GGAGCTCCTGTTTGTTCTGTT 58.423 47.619 26.25 0.00 0.00 3.16
319 335 0.036010 CATCCGGAGCTCCTGTTTGT 60.036 55.000 29.73 9.30 0.00 2.83
324 340 0.467384 AACATCATCCGGAGCTCCTG 59.533 55.000 29.73 23.78 0.00 3.86
353 369 3.119101 GGAACATAGCTCCTCGTCTTTGA 60.119 47.826 0.00 0.00 0.00 2.69
354 370 3.118956 AGGAACATAGCTCCTCGTCTTTG 60.119 47.826 0.00 0.00 39.16 2.77
360 376 1.115467 ACCAGGAACATAGCTCCTCG 58.885 55.000 0.00 0.00 41.61 4.63
369 385 3.117888 ACAGACACTTTCACCAGGAACAT 60.118 43.478 0.00 0.00 34.56 2.71
385 401 5.593095 AGGCGTTCTTAGTATATCACAGACA 59.407 40.000 0.00 0.00 0.00 3.41
387 403 6.710597 AAGGCGTTCTTAGTATATCACAGA 57.289 37.500 0.00 0.00 33.14 3.41
388 404 6.292381 GCAAAGGCGTTCTTAGTATATCACAG 60.292 42.308 0.00 0.00 34.78 3.66
416 438 8.391106 ACTATTCGAGTAATTCACATTTTCTGC 58.609 33.333 0.00 0.00 36.27 4.26
430 452 4.021807 TGTGTGCTTCCACTATTCGAGTAA 60.022 41.667 0.00 0.00 42.54 2.24
431 453 3.508402 TGTGTGCTTCCACTATTCGAGTA 59.492 43.478 0.00 0.00 42.54 2.59
432 454 2.299013 TGTGTGCTTCCACTATTCGAGT 59.701 45.455 0.00 0.00 42.54 4.18
438 460 7.308450 AGTGATATATGTGTGCTTCCACTAT 57.692 36.000 0.00 0.00 42.54 2.12
454 476 3.825014 GCTGGACCGGAGTTAGTGATATA 59.175 47.826 9.46 0.00 0.00 0.86
478 500 1.538512 CATTGTGCAAGTACAGCAGCT 59.461 47.619 12.56 0.00 43.63 4.24
508 530 1.078285 ACTCCGACTCCTCCGACTC 60.078 63.158 0.00 0.00 0.00 3.36
546 568 8.868522 ACTGTCCAGAAGAAATGAAAATATGA 57.131 30.769 0.40 0.00 0.00 2.15
547 569 9.994432 GTACTGTCCAGAAGAAATGAAAATATG 57.006 33.333 0.40 0.00 0.00 1.78
548 570 9.739276 TGTACTGTCCAGAAGAAATGAAAATAT 57.261 29.630 0.40 0.00 0.00 1.28
549 571 9.567776 TTGTACTGTCCAGAAGAAATGAAAATA 57.432 29.630 0.40 0.00 0.00 1.40
550 572 8.463930 TTGTACTGTCCAGAAGAAATGAAAAT 57.536 30.769 0.40 0.00 0.00 1.82
551 573 7.773224 TCTTGTACTGTCCAGAAGAAATGAAAA 59.227 33.333 0.40 0.00 0.00 2.29
552 574 7.279615 TCTTGTACTGTCCAGAAGAAATGAAA 58.720 34.615 0.40 0.00 0.00 2.69
553 575 6.826668 TCTTGTACTGTCCAGAAGAAATGAA 58.173 36.000 0.40 0.00 0.00 2.57
554 576 6.419484 TCTTGTACTGTCCAGAAGAAATGA 57.581 37.500 0.40 0.00 0.00 2.57
555 577 7.819415 TGTATCTTGTACTGTCCAGAAGAAATG 59.181 37.037 0.40 0.00 0.00 2.32
556 578 7.907389 TGTATCTTGTACTGTCCAGAAGAAAT 58.093 34.615 0.40 0.00 0.00 2.17
557 579 7.297936 TGTATCTTGTACTGTCCAGAAGAAA 57.702 36.000 0.40 0.00 0.00 2.52
558 580 6.911250 TGTATCTTGTACTGTCCAGAAGAA 57.089 37.500 0.40 0.00 0.00 2.52
559 581 7.482169 AATGTATCTTGTACTGTCCAGAAGA 57.518 36.000 0.40 0.75 0.00 2.87
560 582 7.065085 CCAAATGTATCTTGTACTGTCCAGAAG 59.935 40.741 0.40 0.00 0.00 2.85
561 583 6.878923 CCAAATGTATCTTGTACTGTCCAGAA 59.121 38.462 0.40 0.00 0.00 3.02
562 584 6.013725 ACCAAATGTATCTTGTACTGTCCAGA 60.014 38.462 0.40 0.00 0.00 3.86
563 585 6.173339 ACCAAATGTATCTTGTACTGTCCAG 58.827 40.000 0.00 0.00 0.00 3.86
564 586 6.013725 AGACCAAATGTATCTTGTACTGTCCA 60.014 38.462 0.00 0.00 0.00 4.02
565 587 6.313905 CAGACCAAATGTATCTTGTACTGTCC 59.686 42.308 0.00 0.00 0.00 4.02
566 588 6.874134 ACAGACCAAATGTATCTTGTACTGTC 59.126 38.462 0.00 0.00 35.43 3.51
567 589 6.769512 ACAGACCAAATGTATCTTGTACTGT 58.230 36.000 0.00 0.00 35.48 3.55
568 590 7.672983 AACAGACCAAATGTATCTTGTACTG 57.327 36.000 0.00 0.00 34.35 2.74
569 591 7.936847 TGAAACAGACCAAATGTATCTTGTACT 59.063 33.333 0.00 0.00 0.00 2.73
570 592 8.094798 TGAAACAGACCAAATGTATCTTGTAC 57.905 34.615 0.00 0.00 0.00 2.90
571 593 8.684386 TTGAAACAGACCAAATGTATCTTGTA 57.316 30.769 0.00 0.00 0.00 2.41
572 594 7.581213 TTGAAACAGACCAAATGTATCTTGT 57.419 32.000 0.00 0.00 0.00 3.16
600 622 9.304731 GGCACCGATCGTATATTACATATTTAA 57.695 33.333 15.09 0.00 0.00 1.52
601 623 8.468399 TGGCACCGATCGTATATTACATATTTA 58.532 33.333 15.09 0.00 0.00 1.40
602 624 7.324935 TGGCACCGATCGTATATTACATATTT 58.675 34.615 15.09 0.00 0.00 1.40
603 625 6.869695 TGGCACCGATCGTATATTACATATT 58.130 36.000 15.09 0.00 0.00 1.28
604 626 6.459670 TGGCACCGATCGTATATTACATAT 57.540 37.500 15.09 0.00 0.00 1.78
605 627 5.900865 TGGCACCGATCGTATATTACATA 57.099 39.130 15.09 0.00 0.00 2.29
606 628 4.794278 TGGCACCGATCGTATATTACAT 57.206 40.909 15.09 0.00 0.00 2.29
607 629 4.587584 TTGGCACCGATCGTATATTACA 57.412 40.909 15.09 0.89 0.00 2.41
608 630 5.910637 TTTTGGCACCGATCGTATATTAC 57.089 39.130 15.09 0.00 0.00 1.89
609 631 7.442969 AGAAATTTTGGCACCGATCGTATATTA 59.557 33.333 15.09 0.00 0.00 0.98
610 632 6.262273 AGAAATTTTGGCACCGATCGTATATT 59.738 34.615 15.09 0.00 0.00 1.28
611 633 5.763204 AGAAATTTTGGCACCGATCGTATAT 59.237 36.000 15.09 0.00 0.00 0.86
612 634 5.120399 AGAAATTTTGGCACCGATCGTATA 58.880 37.500 15.09 0.00 0.00 1.47
613 635 3.945285 AGAAATTTTGGCACCGATCGTAT 59.055 39.130 15.09 0.00 0.00 3.06
614 636 3.340034 AGAAATTTTGGCACCGATCGTA 58.660 40.909 15.09 0.00 0.00 3.43
615 637 2.159382 AGAAATTTTGGCACCGATCGT 58.841 42.857 15.09 0.00 0.00 3.73
616 638 2.919666 AGAAATTTTGGCACCGATCG 57.080 45.000 8.51 8.51 0.00 3.69
617 639 5.296780 TGAGATAGAAATTTTGGCACCGATC 59.703 40.000 0.00 0.00 0.00 3.69
618 640 5.192927 TGAGATAGAAATTTTGGCACCGAT 58.807 37.500 0.00 0.00 0.00 4.18
619 641 4.584874 TGAGATAGAAATTTTGGCACCGA 58.415 39.130 0.00 0.00 0.00 4.69
620 642 4.396166 ACTGAGATAGAAATTTTGGCACCG 59.604 41.667 0.00 0.00 0.00 4.94
621 643 5.904362 ACTGAGATAGAAATTTTGGCACC 57.096 39.130 0.00 0.00 0.00 5.01
622 644 6.803807 GTGAACTGAGATAGAAATTTTGGCAC 59.196 38.462 0.00 0.00 0.00 5.01
623 645 6.489700 TGTGAACTGAGATAGAAATTTTGGCA 59.510 34.615 0.00 0.00 0.00 4.92
624 646 6.913170 TGTGAACTGAGATAGAAATTTTGGC 58.087 36.000 0.00 0.00 0.00 4.52
625 647 9.918630 ATTTGTGAACTGAGATAGAAATTTTGG 57.081 29.630 0.00 0.00 0.00 3.28
629 651 9.401058 CCCTATTTGTGAACTGAGATAGAAATT 57.599 33.333 0.00 0.00 0.00 1.82
630 652 8.552296 ACCCTATTTGTGAACTGAGATAGAAAT 58.448 33.333 0.00 0.00 0.00 2.17
631 653 7.824289 CACCCTATTTGTGAACTGAGATAGAAA 59.176 37.037 0.00 0.00 35.74 2.52
632 654 7.331026 CACCCTATTTGTGAACTGAGATAGAA 58.669 38.462 0.00 0.00 35.74 2.10
633 655 6.630413 GCACCCTATTTGTGAACTGAGATAGA 60.630 42.308 0.00 0.00 35.74 1.98
634 656 5.525378 GCACCCTATTTGTGAACTGAGATAG 59.475 44.000 0.00 0.00 35.74 2.08
635 657 5.189736 AGCACCCTATTTGTGAACTGAGATA 59.810 40.000 0.00 0.00 35.74 1.98
636 658 4.018960 AGCACCCTATTTGTGAACTGAGAT 60.019 41.667 0.00 0.00 35.74 2.75
637 659 3.327757 AGCACCCTATTTGTGAACTGAGA 59.672 43.478 0.00 0.00 35.74 3.27
638 660 3.679389 AGCACCCTATTTGTGAACTGAG 58.321 45.455 0.00 0.00 35.74 3.35
639 661 3.327757 AGAGCACCCTATTTGTGAACTGA 59.672 43.478 0.00 0.00 35.74 3.41
640 662 3.679389 AGAGCACCCTATTTGTGAACTG 58.321 45.455 0.00 0.00 35.74 3.16
641 663 4.532521 AGTAGAGCACCCTATTTGTGAACT 59.467 41.667 0.00 0.00 35.74 3.01
642 664 4.833390 AGTAGAGCACCCTATTTGTGAAC 58.167 43.478 0.00 0.00 35.74 3.18
643 665 5.720041 AGTAGTAGAGCACCCTATTTGTGAA 59.280 40.000 0.00 0.00 35.74 3.18
644 666 5.127194 CAGTAGTAGAGCACCCTATTTGTGA 59.873 44.000 0.00 0.00 35.74 3.58
645 667 5.352284 CAGTAGTAGAGCACCCTATTTGTG 58.648 45.833 0.00 0.00 36.79 3.33
646 668 4.406003 CCAGTAGTAGAGCACCCTATTTGT 59.594 45.833 0.00 0.00 0.00 2.83
647 669 4.202264 CCCAGTAGTAGAGCACCCTATTTG 60.202 50.000 0.00 0.00 0.00 2.32
648 670 3.967987 CCCAGTAGTAGAGCACCCTATTT 59.032 47.826 0.00 0.00 0.00 1.40
649 671 3.052033 ACCCAGTAGTAGAGCACCCTATT 60.052 47.826 0.00 0.00 0.00 1.73
650 672 2.518834 ACCCAGTAGTAGAGCACCCTAT 59.481 50.000 0.00 0.00 0.00 2.57
651 673 1.928077 ACCCAGTAGTAGAGCACCCTA 59.072 52.381 0.00 0.00 0.00 3.53
652 674 0.711184 ACCCAGTAGTAGAGCACCCT 59.289 55.000 0.00 0.00 0.00 4.34
653 675 1.112950 GACCCAGTAGTAGAGCACCC 58.887 60.000 0.00 0.00 0.00 4.61
654 676 1.477295 GTGACCCAGTAGTAGAGCACC 59.523 57.143 0.00 0.00 0.00 5.01
655 677 2.168496 TGTGACCCAGTAGTAGAGCAC 58.832 52.381 0.00 0.00 0.00 4.40
656 678 2.597578 TGTGACCCAGTAGTAGAGCA 57.402 50.000 0.00 0.00 0.00 4.26
657 679 3.955650 TTTGTGACCCAGTAGTAGAGC 57.044 47.619 0.00 0.00 0.00 4.09
658 680 6.231211 ACATTTTTGTGACCCAGTAGTAGAG 58.769 40.000 0.00 0.00 0.00 2.43
659 681 6.182507 ACATTTTTGTGACCCAGTAGTAGA 57.817 37.500 0.00 0.00 0.00 2.59
660 682 5.411669 GGACATTTTTGTGACCCAGTAGTAG 59.588 44.000 0.00 0.00 0.00 2.57
661 683 5.072600 AGGACATTTTTGTGACCCAGTAGTA 59.927 40.000 0.00 0.00 35.00 1.82
662 684 4.141251 AGGACATTTTTGTGACCCAGTAGT 60.141 41.667 0.00 0.00 35.00 2.73
663 685 4.398319 AGGACATTTTTGTGACCCAGTAG 58.602 43.478 0.00 0.00 35.00 2.57
664 686 4.447138 AGGACATTTTTGTGACCCAGTA 57.553 40.909 0.00 0.00 35.00 2.74
665 687 3.312736 AGGACATTTTTGTGACCCAGT 57.687 42.857 0.00 0.00 35.00 4.00
666 688 5.982890 AATAGGACATTTTTGTGACCCAG 57.017 39.130 0.00 0.00 35.00 4.45
667 689 6.520272 CAAAATAGGACATTTTTGTGACCCA 58.480 36.000 0.00 0.00 37.80 4.51
668 690 5.408299 GCAAAATAGGACATTTTTGTGACCC 59.592 40.000 9.17 0.00 42.21 4.46
669 691 6.223120 AGCAAAATAGGACATTTTTGTGACC 58.777 36.000 9.17 0.00 42.21 4.02
670 692 8.699749 GTTAGCAAAATAGGACATTTTTGTGAC 58.300 33.333 9.17 3.79 42.21 3.67
671 693 7.593273 CGTTAGCAAAATAGGACATTTTTGTGA 59.407 33.333 9.17 0.00 42.21 3.58
672 694 7.593273 TCGTTAGCAAAATAGGACATTTTTGTG 59.407 33.333 9.17 0.00 42.21 3.33
673 695 7.653647 TCGTTAGCAAAATAGGACATTTTTGT 58.346 30.769 9.17 0.00 42.21 2.83
674 696 8.687824 ATCGTTAGCAAAATAGGACATTTTTG 57.312 30.769 4.26 4.26 42.79 2.44
675 697 9.705290 AAATCGTTAGCAAAATAGGACATTTTT 57.295 25.926 0.00 0.00 0.00 1.94
676 698 9.353999 GAAATCGTTAGCAAAATAGGACATTTT 57.646 29.630 0.00 0.00 0.00 1.82
677 699 8.519526 TGAAATCGTTAGCAAAATAGGACATTT 58.480 29.630 0.00 0.00 0.00 2.32
678 700 8.050778 TGAAATCGTTAGCAAAATAGGACATT 57.949 30.769 0.00 0.00 0.00 2.71
679 701 7.624360 TGAAATCGTTAGCAAAATAGGACAT 57.376 32.000 0.00 0.00 0.00 3.06
680 702 7.441890 TTGAAATCGTTAGCAAAATAGGACA 57.558 32.000 0.00 0.00 0.00 4.02
681 703 8.736751 TTTTGAAATCGTTAGCAAAATAGGAC 57.263 30.769 0.00 0.00 35.88 3.85
682 704 9.921637 ATTTTTGAAATCGTTAGCAAAATAGGA 57.078 25.926 0.00 0.00 39.21 2.94
689 711 9.737427 TCTAACAATTTTTGAAATCGTTAGCAA 57.263 25.926 14.76 2.49 36.11 3.91
690 712 9.906660 ATCTAACAATTTTTGAAATCGTTAGCA 57.093 25.926 14.76 8.11 36.11 3.49
710 732 9.964253 CGATCATATCATGCTTTAACATCTAAC 57.036 33.333 0.00 0.00 0.00 2.34
711 733 9.154847 CCGATCATATCATGCTTTAACATCTAA 57.845 33.333 0.00 0.00 0.00 2.10
712 734 8.531146 TCCGATCATATCATGCTTTAACATCTA 58.469 33.333 0.00 0.00 0.00 1.98
713 735 7.389232 TCCGATCATATCATGCTTTAACATCT 58.611 34.615 0.00 0.00 0.00 2.90
714 736 7.547019 TCTCCGATCATATCATGCTTTAACATC 59.453 37.037 0.00 0.00 0.00 3.06
715 737 7.389232 TCTCCGATCATATCATGCTTTAACAT 58.611 34.615 0.00 0.00 0.00 2.71
716 738 6.758254 TCTCCGATCATATCATGCTTTAACA 58.242 36.000 0.00 0.00 0.00 2.41
717 739 6.312426 CCTCTCCGATCATATCATGCTTTAAC 59.688 42.308 0.00 0.00 0.00 2.01
718 740 6.014242 ACCTCTCCGATCATATCATGCTTTAA 60.014 38.462 0.00 0.00 0.00 1.52
719 741 5.481824 ACCTCTCCGATCATATCATGCTTTA 59.518 40.000 0.00 0.00 0.00 1.85
720 742 4.285517 ACCTCTCCGATCATATCATGCTTT 59.714 41.667 0.00 0.00 0.00 3.51
721 743 3.837146 ACCTCTCCGATCATATCATGCTT 59.163 43.478 0.00 0.00 0.00 3.91
722 744 3.439154 ACCTCTCCGATCATATCATGCT 58.561 45.455 0.00 0.00 0.00 3.79
723 745 3.883830 ACCTCTCCGATCATATCATGC 57.116 47.619 0.00 0.00 0.00 4.06
724 746 4.753233 GGAACCTCTCCGATCATATCATG 58.247 47.826 0.00 0.00 33.37 3.07
736 758 0.687354 TCAACAGCTGGAACCTCTCC 59.313 55.000 19.93 0.00 45.64 3.71
737 759 2.777832 ATCAACAGCTGGAACCTCTC 57.222 50.000 19.93 0.00 0.00 3.20
738 760 4.472833 AGATAATCAACAGCTGGAACCTCT 59.527 41.667 19.93 8.02 0.00 3.69
739 761 4.775236 AGATAATCAACAGCTGGAACCTC 58.225 43.478 19.93 5.83 0.00 3.85
740 762 4.681781 CGAGATAATCAACAGCTGGAACCT 60.682 45.833 19.93 3.70 0.00 3.50
741 763 3.557595 CGAGATAATCAACAGCTGGAACC 59.442 47.826 19.93 0.00 0.00 3.62
742 764 3.001736 GCGAGATAATCAACAGCTGGAAC 59.998 47.826 19.93 0.61 0.00 3.62
743 765 3.198068 GCGAGATAATCAACAGCTGGAA 58.802 45.455 19.93 2.76 0.00 3.53
744 766 2.168313 TGCGAGATAATCAACAGCTGGA 59.832 45.455 19.93 6.92 0.00 3.86
745 767 2.543012 CTGCGAGATAATCAACAGCTGG 59.457 50.000 19.93 0.36 0.00 4.85
746 768 3.193263 ACTGCGAGATAATCAACAGCTG 58.807 45.455 13.48 13.48 35.92 4.24
747 769 3.533606 ACTGCGAGATAATCAACAGCT 57.466 42.857 0.00 0.00 35.92 4.24
748 770 3.868077 AGAACTGCGAGATAATCAACAGC 59.132 43.478 0.00 0.00 35.92 4.40
749 771 5.347342 AGAGAACTGCGAGATAATCAACAG 58.653 41.667 0.00 0.00 37.63 3.16
750 772 5.330455 AGAGAACTGCGAGATAATCAACA 57.670 39.130 0.00 0.00 0.00 3.33
751 773 6.654793 AAAGAGAACTGCGAGATAATCAAC 57.345 37.500 0.00 0.00 0.00 3.18
752 774 7.010552 GCTAAAAGAGAACTGCGAGATAATCAA 59.989 37.037 0.00 0.00 0.00 2.57
753 775 6.477033 GCTAAAAGAGAACTGCGAGATAATCA 59.523 38.462 0.00 0.00 0.00 2.57
754 776 6.699642 AGCTAAAAGAGAACTGCGAGATAATC 59.300 38.462 0.00 0.00 0.00 1.75
755 777 6.478344 CAGCTAAAAGAGAACTGCGAGATAAT 59.522 38.462 0.00 0.00 0.00 1.28
756 778 5.807520 CAGCTAAAAGAGAACTGCGAGATAA 59.192 40.000 0.00 0.00 0.00 1.75
757 779 5.105716 ACAGCTAAAAGAGAACTGCGAGATA 60.106 40.000 0.00 0.00 31.46 1.98
758 780 4.180057 CAGCTAAAAGAGAACTGCGAGAT 58.820 43.478 0.00 0.00 0.00 2.75
759 781 3.005897 ACAGCTAAAAGAGAACTGCGAGA 59.994 43.478 0.00 0.00 31.46 4.04
760 782 3.321497 ACAGCTAAAAGAGAACTGCGAG 58.679 45.455 0.00 0.00 31.46 5.03
761 783 3.386768 ACAGCTAAAAGAGAACTGCGA 57.613 42.857 0.00 0.00 31.46 5.10
762 784 3.120511 GGAACAGCTAAAAGAGAACTGCG 60.121 47.826 0.00 0.00 31.46 5.18
763 785 4.068599 AGGAACAGCTAAAAGAGAACTGC 58.931 43.478 0.00 0.00 31.46 4.40
764 786 6.625873 AAAGGAACAGCTAAAAGAGAACTG 57.374 37.500 0.00 0.00 0.00 3.16
765 787 7.646548 AAAAAGGAACAGCTAAAAGAGAACT 57.353 32.000 0.00 0.00 0.00 3.01
786 808 4.646572 AGAACAAAGGCAAACCACAAAAA 58.353 34.783 0.00 0.00 39.06 1.94
787 809 4.278975 AGAACAAAGGCAAACCACAAAA 57.721 36.364 0.00 0.00 39.06 2.44
788 810 3.971245 AGAACAAAGGCAAACCACAAA 57.029 38.095 0.00 0.00 39.06 2.83
789 811 3.971245 AAGAACAAAGGCAAACCACAA 57.029 38.095 0.00 0.00 39.06 3.33
790 812 3.971245 AAAGAACAAAGGCAAACCACA 57.029 38.095 0.00 0.00 39.06 4.17
791 813 4.000325 ACAAAAGAACAAAGGCAAACCAC 59.000 39.130 0.00 0.00 39.06 4.16
792 814 4.020662 AGACAAAAGAACAAAGGCAAACCA 60.021 37.500 0.00 0.00 39.06 3.67
793 815 4.329801 CAGACAAAAGAACAAAGGCAAACC 59.670 41.667 0.00 0.00 0.00 3.27
794 816 4.329801 CCAGACAAAAGAACAAAGGCAAAC 59.670 41.667 0.00 0.00 0.00 2.93
795 817 4.020662 ACCAGACAAAAGAACAAAGGCAAA 60.021 37.500 0.00 0.00 0.00 3.68
796 818 3.513515 ACCAGACAAAAGAACAAAGGCAA 59.486 39.130 0.00 0.00 0.00 4.52
797 819 3.096092 ACCAGACAAAAGAACAAAGGCA 58.904 40.909 0.00 0.00 0.00 4.75
798 820 3.801114 ACCAGACAAAAGAACAAAGGC 57.199 42.857 0.00 0.00 0.00 4.35
799 821 5.582689 AGAACCAGACAAAAGAACAAAGG 57.417 39.130 0.00 0.00 0.00 3.11
800 822 6.389906 ACAAGAACCAGACAAAAGAACAAAG 58.610 36.000 0.00 0.00 0.00 2.77
801 823 6.339587 ACAAGAACCAGACAAAAGAACAAA 57.660 33.333 0.00 0.00 0.00 2.83
802 824 5.975693 ACAAGAACCAGACAAAAGAACAA 57.024 34.783 0.00 0.00 0.00 2.83
803 825 5.475220 TCAACAAGAACCAGACAAAAGAACA 59.525 36.000 0.00 0.00 0.00 3.18
804 826 5.949735 TCAACAAGAACCAGACAAAAGAAC 58.050 37.500 0.00 0.00 0.00 3.01
805 827 6.183360 GGATCAACAAGAACCAGACAAAAGAA 60.183 38.462 0.00 0.00 38.94 2.52
806 828 5.299279 GGATCAACAAGAACCAGACAAAAGA 59.701 40.000 0.00 0.00 38.94 2.52
807 829 5.300286 AGGATCAACAAGAACCAGACAAAAG 59.700 40.000 0.00 0.00 41.44 2.27
808 830 5.200483 AGGATCAACAAGAACCAGACAAAA 58.800 37.500 0.00 0.00 41.44 2.44
809 831 4.792068 AGGATCAACAAGAACCAGACAAA 58.208 39.130 0.00 0.00 41.44 2.83
810 832 4.437682 AGGATCAACAAGAACCAGACAA 57.562 40.909 0.00 0.00 41.44 3.18
811 833 4.103153 AGAAGGATCAACAAGAACCAGACA 59.897 41.667 0.00 0.00 41.44 3.41
812 834 4.646572 AGAAGGATCAACAAGAACCAGAC 58.353 43.478 0.00 0.00 41.44 3.51
813 835 4.982241 AGAAGGATCAACAAGAACCAGA 57.018 40.909 0.00 0.00 41.44 3.86
814 836 7.693969 AAATAGAAGGATCAACAAGAACCAG 57.306 36.000 0.00 0.00 41.44 4.00
815 837 8.477419 AAAAATAGAAGGATCAACAAGAACCA 57.523 30.769 0.00 0.00 41.44 3.67
816 838 7.750903 CGAAAAATAGAAGGATCAACAAGAACC 59.249 37.037 0.00 0.00 39.38 3.62
817 839 8.290325 ACGAAAAATAGAAGGATCAACAAGAAC 58.710 33.333 0.00 0.00 0.00 3.01
818 840 8.391075 ACGAAAAATAGAAGGATCAACAAGAA 57.609 30.769 0.00 0.00 0.00 2.52
819 841 7.979444 ACGAAAAATAGAAGGATCAACAAGA 57.021 32.000 0.00 0.00 0.00 3.02
820 842 8.936864 AGTACGAAAAATAGAAGGATCAACAAG 58.063 33.333 0.00 0.00 0.00 3.16
821 843 8.842358 AGTACGAAAAATAGAAGGATCAACAA 57.158 30.769 0.00 0.00 0.00 2.83
878 900 7.247456 ACTAGGGGAATAAGCTATTCTAAGC 57.753 40.000 12.59 0.00 43.15 3.09
882 904 8.999895 TGTTTTACTAGGGGAATAAGCTATTCT 58.000 33.333 12.59 0.00 43.15 2.40
883 905 9.274206 CTGTTTTACTAGGGGAATAAGCTATTC 57.726 37.037 0.00 0.00 42.94 1.75
884 906 8.779031 ACTGTTTTACTAGGGGAATAAGCTATT 58.221 33.333 0.00 0.00 0.00 1.73
885 907 8.333226 ACTGTTTTACTAGGGGAATAAGCTAT 57.667 34.615 0.00 0.00 0.00 2.97
886 908 7.744678 ACTGTTTTACTAGGGGAATAAGCTA 57.255 36.000 0.00 0.00 0.00 3.32
887 909 6.638021 ACTGTTTTACTAGGGGAATAAGCT 57.362 37.500 0.00 0.00 0.00 3.74
888 910 7.333323 TGTACTGTTTTACTAGGGGAATAAGC 58.667 38.462 0.00 0.00 0.00 3.09
889 911 9.729281 TTTGTACTGTTTTACTAGGGGAATAAG 57.271 33.333 0.00 0.00 0.00 1.73
890 912 9.729281 CTTTGTACTGTTTTACTAGGGGAATAA 57.271 33.333 0.00 0.00 0.00 1.40
891 913 9.103582 TCTTTGTACTGTTTTACTAGGGGAATA 57.896 33.333 0.00 0.00 0.00 1.75
892 914 7.981142 TCTTTGTACTGTTTTACTAGGGGAAT 58.019 34.615 0.00 0.00 0.00 3.01
893 915 7.377696 TCTTTGTACTGTTTTACTAGGGGAA 57.622 36.000 0.00 0.00 0.00 3.97
894 916 6.999705 TCTTTGTACTGTTTTACTAGGGGA 57.000 37.500 0.00 0.00 0.00 4.81
895 917 7.621796 AGATCTTTGTACTGTTTTACTAGGGG 58.378 38.462 0.00 0.00 0.00 4.79
896 918 8.936864 CAAGATCTTTGTACTGTTTTACTAGGG 58.063 37.037 4.86 0.00 0.00 3.53
897 919 9.706691 TCAAGATCTTTGTACTGTTTTACTAGG 57.293 33.333 4.86 0.00 0.00 3.02
900 922 9.832445 TTCTCAAGATCTTTGTACTGTTTTACT 57.168 29.630 4.86 0.00 0.00 2.24
902 924 9.273016 CCTTCTCAAGATCTTTGTACTGTTTTA 57.727 33.333 4.86 0.00 0.00 1.52
903 925 7.255277 GCCTTCTCAAGATCTTTGTACTGTTTT 60.255 37.037 4.86 0.00 0.00 2.43
904 926 6.205658 GCCTTCTCAAGATCTTTGTACTGTTT 59.794 38.462 4.86 0.00 0.00 2.83
905 927 5.703130 GCCTTCTCAAGATCTTTGTACTGTT 59.297 40.000 4.86 0.00 0.00 3.16
906 928 5.012561 AGCCTTCTCAAGATCTTTGTACTGT 59.987 40.000 4.86 0.00 0.00 3.55
907 929 5.486526 AGCCTTCTCAAGATCTTTGTACTG 58.513 41.667 4.86 0.00 0.00 2.74
908 930 5.753721 AGCCTTCTCAAGATCTTTGTACT 57.246 39.130 4.86 0.00 0.00 2.73
909 931 6.348868 CCAAAGCCTTCTCAAGATCTTTGTAC 60.349 42.308 4.86 0.00 41.65 2.90
910 932 5.707298 CCAAAGCCTTCTCAAGATCTTTGTA 59.293 40.000 4.86 0.00 41.65 2.41
911 933 4.522022 CCAAAGCCTTCTCAAGATCTTTGT 59.478 41.667 4.86 0.00 41.65 2.83
912 934 4.763793 TCCAAAGCCTTCTCAAGATCTTTG 59.236 41.667 4.86 16.07 42.17 2.77
1241 1482 4.408182 TGAAAGCTGGCTATTCCTAGTC 57.592 45.455 0.00 0.00 35.26 2.59
1242 1483 6.500589 TTATGAAAGCTGGCTATTCCTAGT 57.499 37.500 0.00 0.00 35.26 2.57
1267 1515 4.842139 ACGAAAGTAACTCGATGCATTC 57.158 40.909 0.00 0.00 46.88 2.67
1358 1609 1.834188 GGAACATGTAACCCCACCTG 58.166 55.000 0.00 0.00 0.00 4.00
1375 1626 1.151987 TGGTTCTTCCTTCCCCGGA 60.152 57.895 0.73 0.00 37.07 5.14
1697 1960 8.515695 TGTACCGACCTTGTATCCTATATATG 57.484 38.462 0.00 0.00 0.00 1.78
1914 2182 5.393461 CCCTCTAATCATGTGCCTGAAAAAC 60.393 44.000 0.00 0.00 0.00 2.43
1919 2187 2.763039 TCCCTCTAATCATGTGCCTGA 58.237 47.619 0.00 0.00 0.00 3.86
2146 2414 4.390297 GTGTGATCAGCTGAAAAGTACTCC 59.610 45.833 22.50 6.63 0.00 3.85
2147 2415 4.991056 TGTGTGATCAGCTGAAAAGTACTC 59.009 41.667 22.50 12.30 0.00 2.59
2149 2417 4.511454 TGTGTGTGATCAGCTGAAAAGTAC 59.489 41.667 22.50 15.90 0.00 2.73
2318 2622 5.163195 TGGCTGGAGTAGTTTCTTTTCTTCT 60.163 40.000 0.00 0.00 0.00 2.85
2319 2623 5.049336 GTGGCTGGAGTAGTTTCTTTTCTTC 60.049 44.000 0.00 0.00 0.00 2.87
2465 2776 7.308348 CGTTGAGTACCAAAGATTACAAATGGT 60.308 37.037 1.03 1.03 45.81 3.55
2577 2895 9.545105 ACTCAGATATTCAAATGAGAGAACATC 57.455 33.333 7.97 0.00 41.35 3.06
2719 3037 5.534278 TGTCCAGTAAATCAACATTGAAGCA 59.466 36.000 0.00 0.00 41.13 3.91
2737 3055 1.813513 GTGGTCATCACCTTGTCCAG 58.186 55.000 0.00 0.00 44.17 3.86
2808 3126 4.025040 TGAATCATCTGAAGTGTTGCCT 57.975 40.909 0.00 0.00 0.00 4.75
2992 3310 7.175347 TCTAGCACATAATCCACATATCTCC 57.825 40.000 0.00 0.00 0.00 3.71
3041 3359 7.042797 TGAGCAAAGCTTTAGAACATTTCTT 57.957 32.000 12.25 0.00 39.88 2.52
3117 3435 9.836864 AGCAAAACCAAAAAGAAAGAGATAAAT 57.163 25.926 0.00 0.00 0.00 1.40
3251 3570 5.802064 TGTTGAACTTGTGTTGTTCGATAC 58.198 37.500 0.00 0.00 44.67 2.24
3255 3574 6.964370 TCTATTTGTTGAACTTGTGTTGTTCG 59.036 34.615 0.00 0.00 44.67 3.95
3347 3666 4.764172 AGGAACATGTATCTTGAGTGCTC 58.236 43.478 0.00 0.00 0.00 4.26
3593 3926 3.376546 GCATGCAGGAGAGGAAACTTAAG 59.623 47.826 14.21 0.00 44.43 1.85
3595 3928 2.573462 AGCATGCAGGAGAGGAAACTTA 59.427 45.455 21.98 0.00 44.43 2.24
3598 3931 1.065564 AGAGCATGCAGGAGAGGAAAC 60.066 52.381 21.98 0.00 0.00 2.78
3601 3934 0.032316 AGAGAGCATGCAGGAGAGGA 60.032 55.000 21.98 0.00 0.00 3.71
3603 3936 1.405872 AGAGAGAGCATGCAGGAGAG 58.594 55.000 21.98 0.00 0.00 3.20
3668 4002 4.568152 AGTTACTTTTCACACATGCCAC 57.432 40.909 0.00 0.00 0.00 5.01
3742 4076 6.591001 ACAGTGGCCAAAATGTTAAGAAATT 58.409 32.000 7.24 0.00 0.00 1.82
3832 4166 8.534333 TCAGTGTCTTCTTCATAACACATAAC 57.466 34.615 7.18 0.00 43.43 1.89
3835 4169 6.997655 TCTCAGTGTCTTCTTCATAACACAT 58.002 36.000 7.18 0.00 43.43 3.21
3860 4194 1.001815 GCCTTTTGTACTTCTGCGCAA 60.002 47.619 13.05 0.00 0.00 4.85
3864 4198 3.578688 CATTGGCCTTTTGTACTTCTGC 58.421 45.455 3.32 0.00 0.00 4.26
3997 4331 1.021390 CCTCCTGACCGCACATGAAC 61.021 60.000 0.00 0.00 0.00 3.18
4034 4368 4.973168 TGGAGACAATGAGTTAAGCAAGT 58.027 39.130 0.00 0.00 37.44 3.16
4083 4418 6.213600 AGACACCTTCTTTGGACACTATACAT 59.786 38.462 0.00 0.00 0.00 2.29
4200 4536 7.816945 CCAAATTGTCACTTTGGTATTCATC 57.183 36.000 21.08 0.00 44.95 2.92
4282 4618 2.115910 CCACTGCCCACCACATGT 59.884 61.111 0.00 0.00 0.00 3.21
4323 4659 1.790387 GATGTGCACTCGTTGGCTC 59.210 57.895 19.41 0.00 0.00 4.70
4364 4700 2.478709 GCGTGTGTGATGTTTTGGTCAA 60.479 45.455 0.00 0.00 0.00 3.18
4369 4705 2.110990 CAGTGCGTGTGTGATGTTTTG 58.889 47.619 0.00 0.00 0.00 2.44
4422 4758 1.541889 CCAGAACAGCAGCACAAGAGA 60.542 52.381 0.00 0.00 0.00 3.10
4477 4815 5.726688 GCAAAGACGTGCGATATTTACACAT 60.727 40.000 0.00 0.00 34.21 3.21
4549 4887 0.684535 TGACACCTGAGCCGAATTCA 59.315 50.000 6.22 0.00 0.00 2.57
4608 4972 1.600957 CACAGCACTGTATGGCATAGC 59.399 52.381 7.61 7.87 42.83 2.97
4610 4974 2.631267 CACACAGCACTGTATGGCATA 58.369 47.619 2.32 2.32 42.83 3.14
4632 4996 2.375174 TCACCTGGGTGCAATTTAGTCT 59.625 45.455 14.35 0.00 45.04 3.24
4648 5012 0.033796 CATGCCCCAATCAGTCACCT 60.034 55.000 0.00 0.00 0.00 4.00
4655 5019 0.394762 GACTCAGCATGCCCCAATCA 60.395 55.000 15.66 0.00 34.76 2.57
4852 5217 3.244805 GGCCCCCATCCTATTACTACAAC 60.245 52.174 0.00 0.00 0.00 3.32
4879 5244 3.679980 CGACCATAACACTCTTGACAAGG 59.320 47.826 15.13 8.47 0.00 3.61
4883 5248 4.056050 ACAACGACCATAACACTCTTGAC 58.944 43.478 0.00 0.00 0.00 3.18
4905 5270 3.332034 CACACTTGCTCATCATCACAGA 58.668 45.455 0.00 0.00 0.00 3.41
4950 5315 3.097614 GTCACACTCTTAAGCCCTAGGA 58.902 50.000 11.48 0.00 0.00 2.94
4958 5323 4.450419 CCAGCTTTCTGTCACACTCTTAAG 59.550 45.833 0.00 0.00 38.66 1.85
4982 5347 5.045869 TCCCCTTCTCCAACTTATTAGTGTG 60.046 44.000 0.00 0.00 34.01 3.82
5149 5582 2.262211 GCCATTGCAAAGACGGAAATC 58.738 47.619 1.71 0.00 37.47 2.17
5184 5625 8.240682 AGTAAAAGCAAATATATCGCAAACACA 58.759 29.630 9.15 0.00 0.00 3.72
5329 5773 4.695396 ACGAATACACACACTGTAAACCA 58.305 39.130 0.00 0.00 38.90 3.67
5553 5999 3.054361 ACCCTGTGAGGATAACAATCACC 60.054 47.826 2.42 0.00 42.11 4.02
5558 6004 3.907474 TCTGAACCCTGTGAGGATAACAA 59.093 43.478 0.00 0.00 37.67 2.83
5801 6249 8.164733 TCCAAAAGTGGTGGTTAAGTGATATAA 58.835 33.333 0.00 0.00 46.11 0.98
5924 6375 0.527817 GACGGACCATTGCCTACTCG 60.528 60.000 0.00 0.00 0.00 4.18
5937 6388 4.164252 CTGCGTTACAGGACGGAC 57.836 61.111 0.00 0.00 43.19 4.79
5975 6426 2.338984 GTCGGCCTCAACTCGTGT 59.661 61.111 0.00 0.00 0.00 4.49
6004 6455 3.138930 GACGCGGGAGAGCATGCTA 62.139 63.158 22.74 0.00 36.85 3.49
6008 6459 2.441164 AGAGACGCGGGAGAGCAT 60.441 61.111 12.47 0.00 36.85 3.79
6089 6553 3.039011 ACCTCTCCATTATGGCGTACTT 58.961 45.455 6.33 0.00 37.47 2.24
6151 6615 4.245660 CAACTTGGAACTTATCGAGCTGA 58.754 43.478 0.00 0.00 0.00 4.26
6314 6787 0.600255 GTGTTACAGCAGCACGGTCT 60.600 55.000 0.00 0.00 0.00 3.85
6403 6876 3.056107 CCGATCAAACACTGAGTCCCTAA 60.056 47.826 0.00 0.00 37.52 2.69
6407 6880 2.457366 ACCGATCAAACACTGAGTCC 57.543 50.000 0.00 0.00 37.52 3.85
6412 6885 2.682856 CCCCAATACCGATCAAACACTG 59.317 50.000 0.00 0.00 0.00 3.66
6423 6896 2.495669 ACAAAGCAAATCCCCAATACCG 59.504 45.455 0.00 0.00 0.00 4.02
6449 6922 0.685097 AGCCTGTTTCAACTCGGCTA 59.315 50.000 18.55 0.00 46.75 3.93
6450 6923 1.451936 AGCCTGTTTCAACTCGGCT 59.548 52.632 15.87 15.87 45.17 5.52
6464 6938 1.131638 TGTGGAACTCAGTTCAGCCT 58.868 50.000 19.37 0.00 43.54 4.58
6811 7379 0.037326 TCGTGTCATTCCTGGTCTGC 60.037 55.000 0.00 0.00 0.00 4.26
6816 7384 4.002982 TCTTTTCATCGTGTCATTCCTGG 58.997 43.478 0.00 0.00 0.00 4.45
6964 7532 3.624861 ACAAGTCAGTCAGCAAGTTCTTG 59.375 43.478 8.04 8.04 37.58 3.02
6981 7549 7.255942 CCAATCAGGTCCTTTAATTCAACAAGT 60.256 37.037 0.00 0.00 0.00 3.16
7102 7670 3.743396 GGAGAATATTAACAGCCTCAGCG 59.257 47.826 0.00 0.00 46.67 5.18
7228 7807 6.068010 ACATTGTATTGTTTGACTTCTGGGA 58.932 36.000 0.00 0.00 0.00 4.37
7374 7959 7.624360 ACAGTGTGAAGTTTGATCAAGTTTA 57.376 32.000 8.41 1.05 0.00 2.01
7415 8000 5.451354 TCCTAAAAGTAAGGCCAACAGTTT 58.549 37.500 5.01 9.85 33.84 2.66
7417 8002 4.717279 TCCTAAAAGTAAGGCCAACAGT 57.283 40.909 5.01 0.00 33.84 3.55
7418 8003 4.083484 CGTTCCTAAAAGTAAGGCCAACAG 60.083 45.833 5.01 0.00 33.84 3.16
7637 8237 8.682710 TCTTCAAACATAAAAACTAGCTTGTGT 58.317 29.630 0.36 0.00 0.00 3.72
7638 8238 9.515020 TTCTTCAAACATAAAAACTAGCTTGTG 57.485 29.630 0.36 0.00 0.00 3.33
7800 8400 1.308216 CCATCCCTCCTTCCACCCT 60.308 63.158 0.00 0.00 0.00 4.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.