Multiple sequence alignment - TraesCS1A01G147200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G147200 chr1A 100.000 7328 0 0 1 7328 254182195 254189522 0.000000e+00 13533.0
1 TraesCS1A01G147200 chr1A 91.250 400 25 5 2659 3050 466339827 466339430 3.010000e-148 536.0
2 TraesCS1A01G147200 chr1A 86.154 325 40 5 1 324 195192948 195193268 5.440000e-91 346.0
3 TraesCS1A01G147200 chr1D 93.450 2733 140 20 3055 5761 200712866 200715585 0.000000e+00 4019.0
4 TraesCS1A01G147200 chr1D 94.569 2357 78 14 326 2658 200710539 200712869 0.000000e+00 3598.0
5 TraesCS1A01G147200 chr1D 92.681 1585 94 15 5761 7328 200715649 200717228 0.000000e+00 2265.0
6 TraesCS1A01G147200 chr1D 87.906 339 33 7 1 334 293590294 293589959 6.890000e-105 392.0
7 TraesCS1A01G147200 chr1D 86.322 329 40 5 7 334 145048279 145047955 3.250000e-93 353.0
8 TraesCS1A01G147200 chr1D 86.018 329 42 4 1 328 127491939 127492264 4.210000e-92 350.0
9 TraesCS1A01G147200 chr1D 85.231 325 47 1 1 325 92348604 92348927 4.240000e-87 333.0
10 TraesCS1A01G147200 chr1B 90.595 2754 174 35 3034 5761 288645927 288648621 0.000000e+00 3572.0
11 TraesCS1A01G147200 chr1B 96.796 1904 52 6 759 2656 288644048 288645948 0.000000e+00 3169.0
12 TraesCS1A01G147200 chr1B 91.420 1585 111 18 5761 7328 288648678 288650254 0.000000e+00 2150.0
13 TraesCS1A01G147200 chr1B 91.768 741 43 2 1 723 288642069 288642809 0.000000e+00 1014.0
14 TraesCS1A01G147200 chr1B 91.560 391 26 5 2649 3035 7863396 7863009 3.890000e-147 532.0
15 TraesCS1A01G147200 chr3A 95.792 404 5 5 2658 3049 34039459 34039056 6.200000e-180 641.0
16 TraesCS1A01G147200 chr2A 95.771 402 5 3 2659 3049 261665679 261666079 8.020000e-179 638.0
17 TraesCS1A01G147200 chr2A 88.824 340 31 5 1 339 357328444 357328777 1.900000e-110 411.0
18 TraesCS1A01G147200 chr3D 94.444 396 17 4 2658 3050 43778474 43778867 8.130000e-169 604.0
19 TraesCS1A01G147200 chr5B 92.839 391 23 5 2659 3048 615706047 615706433 4.960000e-156 562.0
20 TraesCS1A01G147200 chr5B 88.529 340 33 4 1 339 231373133 231372799 2.460000e-109 407.0
21 TraesCS1A01G147200 chr5B 78.972 214 35 7 2455 2659 55187025 55186813 3.570000e-28 137.0
22 TraesCS1A01G147200 chr2D 92.132 394 21 7 2658 3049 256679676 256679291 1.390000e-151 547.0
23 TraesCS1A01G147200 chr2D 87.117 326 39 3 1 325 364666486 364666809 4.180000e-97 366.0
24 TraesCS1A01G147200 chr2D 85.337 341 44 5 1 340 205752140 205752475 1.510000e-91 348.0
25 TraesCS1A01G147200 chr7A 91.582 392 26 7 2661 3049 639742685 639742298 1.080000e-147 534.0
26 TraesCS1A01G147200 chr7A 87.654 324 35 4 17 339 299235915 299236234 8.980000e-99 372.0
27 TraesCS1A01G147200 chr7A 83.500 400 39 9 2659 3049 319781861 319781480 1.510000e-91 348.0
28 TraesCS1A01G147200 chr7A 75.946 370 53 24 4758 5105 516146901 516147256 2.740000e-34 158.0
29 TraesCS1A01G147200 chr7A 84.615 65 10 0 324 388 214429219 214429155 1.710000e-06 65.8
30 TraesCS1A01G147200 chr4A 91.349 393 24 8 2658 3049 654102942 654102559 5.030000e-146 529.0
31 TraesCS1A01G147200 chr4A 79.389 262 52 2 1168 1428 330084988 330085248 4.520000e-42 183.0
32 TraesCS1A01G147200 chr5A 85.464 399 39 7 2662 3049 675730454 675730064 1.480000e-106 398.0
33 TraesCS1A01G147200 chr4D 88.615 325 33 4 1 325 115375566 115375886 6.890000e-105 392.0
34 TraesCS1A01G147200 chr4D 88.146 329 35 3 3 328 368673110 368673437 8.920000e-104 388.0
35 TraesCS1A01G147200 chr4D 89.313 262 24 4 81 340 380590391 380590132 7.090000e-85 326.0
36 TraesCS1A01G147200 chr4D 84.118 340 45 6 1 339 356858461 356858130 3.300000e-83 320.0
37 TraesCS1A01G147200 chr4D 84.528 265 35 6 19 281 106018988 106018728 2.620000e-64 257.0
38 TraesCS1A01G147200 chr7D 87.353 340 38 4 1 339 269137024 269136689 1.150000e-102 385.0
39 TraesCS1A01G147200 chr7D 87.385 325 33 4 1 325 515655300 515655616 4.180000e-97 366.0
40 TraesCS1A01G147200 chr5D 87.385 325 40 1 1 325 35066285 35066608 8.980000e-99 372.0
41 TraesCS1A01G147200 chr5D 93.182 44 3 0 2448 2491 393617614 393617571 1.710000e-06 65.8
42 TraesCS1A01G147200 chr7B 85.882 340 43 4 1 339 272679830 272680165 2.510000e-94 357.0
43 TraesCS1A01G147200 chr7B 81.633 196 25 6 2456 2643 40917457 40917265 1.270000e-32 152.0
44 TraesCS1A01G147200 chr7B 86.364 88 10 2 2574 2659 409889217 409889130 2.180000e-15 95.3
45 TraesCS1A01G147200 chr7B 96.774 31 1 0 5909 5939 689935316 689935346 1.300000e-02 52.8
46 TraesCS1A01G147200 chr6D 85.933 327 40 5 1 325 125081802 125081480 1.960000e-90 344.0
47 TraesCS1A01G147200 chr2B 77.612 201 36 6 2468 2659 56626963 56626763 6.010000e-21 113.0
48 TraesCS1A01G147200 chrUn 75.676 222 45 6 2447 2659 348911431 348911210 1.300000e-17 102.0
49 TraesCS1A01G147200 chrUn 76.720 189 36 5 2447 2627 217886493 217886305 1.680000e-16 99.0
50 TraesCS1A01G147200 chrUn 76.720 189 36 5 2447 2627 338142295 338142483 1.680000e-16 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G147200 chr1A 254182195 254189522 7327 False 13533.00 13533 100.000000 1 7328 1 chr1A.!!$F2 7327
1 TraesCS1A01G147200 chr1D 200710539 200717228 6689 False 3294.00 4019 93.566667 326 7328 3 chr1D.!!$F3 7002
2 TraesCS1A01G147200 chr1B 288642069 288650254 8185 False 2476.25 3572 92.644750 1 7328 4 chr1B.!!$F1 7327

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
456 475 0.031585 CTCCAACTCCGACGTGACAA 59.968 55.000 0.00 0.00 0.00 3.18 F
602 621 0.037590 ATGTCCCTTTGCGCAGGTTA 59.962 50.000 11.31 2.98 30.96 2.85 F
667 686 0.468226 TGGACGCTCACAAACCTTCT 59.532 50.000 0.00 0.00 0.00 2.85 F
743 788 0.905357 GTGTCTGGGCCATACTGTCT 59.095 55.000 21.04 0.00 0.00 3.41 F
933 2161 0.984995 CCCTCCCGTTTTTCCTCTCT 59.015 55.000 0.00 0.00 0.00 3.10 F
2681 3910 0.541863 AATGTCTAACAGCTCCCGGG 59.458 55.000 16.85 16.85 0.00 5.73 F
4156 5404 0.038159 GTGACTCCTCCTGTTGTCGG 60.038 60.000 0.00 0.00 32.64 4.79 F
4298 5546 1.133809 TCTTGGGGGAGGTGGACAAG 61.134 60.000 0.00 0.00 39.76 3.16 F
4395 5643 1.351017 GCGGAAATCATGGGGGATCTA 59.649 52.381 0.00 0.00 0.00 1.98 F
5890 7211 1.686355 TGTCCAACCACACCATGAAC 58.314 50.000 0.00 0.00 0.00 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1408 2636 1.175983 GCGATGGTCTCCTCGAGGAT 61.176 60.0 33.66 19.36 44.46 3.24 R
2312 3540 2.675658 AAGGCCCAACTGCTCTTAAA 57.324 45.0 0.00 0.00 0.00 1.52 R
2662 3891 0.541863 CCCGGGAGCTGTTAGACATT 59.458 55.0 18.48 0.00 0.00 2.71 R
2663 3892 0.617820 ACCCGGGAGCTGTTAGACAT 60.618 55.0 32.02 0.00 0.00 3.06 R
2805 4034 0.543410 TGAGGGCTCCACGAAGGTTA 60.543 55.0 0.00 0.00 39.02 2.85 R
4357 5605 0.179034 GCTGCCTCCTACAAGGATGG 60.179 60.0 0.00 2.20 44.81 3.51 R
5466 6720 0.031178 GCGGGCAATCCAATGCTAAG 59.969 55.0 0.00 0.00 45.68 2.18 R
5890 7211 0.109597 GTGGAAGGCTCGTGCAAATG 60.110 55.0 12.07 0.00 41.91 2.32 R
6061 7383 0.308068 CGCCACGAGACGATAGATGT 59.692 55.0 0.00 0.00 41.38 3.06 R
7077 8413 0.539986 TTAGAGGAGCGCGGGAAAAT 59.460 50.0 8.83 0.00 0.00 1.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
80 81 7.530010 ACTTAGTTGTCTACTTTATTCGCGTA 58.470 34.615 5.77 0.00 38.33 4.42
108 109 1.269448 TCCCATGAAGCGCTTGTTTTC 59.731 47.619 30.47 13.77 0.00 2.29
121 122 3.003378 GCTTGTTTTCGGTCAGTAAGCTT 59.997 43.478 3.48 3.48 36.89 3.74
133 134 5.395768 GGTCAGTAAGCTTGATCATAGTGGT 60.396 44.000 9.86 0.00 0.00 4.16
182 183 6.392625 AACTATAGCTTCTAGCATTCACGA 57.607 37.500 0.00 0.00 45.56 4.35
202 203 3.430790 CGATGATGCCTTCTCCTGTGTAA 60.431 47.826 0.00 0.00 0.00 2.41
313 314 9.733556 TTTTATCACAGCTTTGATAGTCCTTAA 57.266 29.630 19.18 9.58 39.19 1.85
357 358 3.995636 AGGGTATTACTCTTCAGAGGCA 58.004 45.455 8.70 0.00 46.13 4.75
378 379 1.713647 TGAACCTAGGCAAATTCCCCA 59.286 47.619 9.30 0.00 0.00 4.96
380 381 3.529734 TGAACCTAGGCAAATTCCCCATA 59.470 43.478 9.30 0.00 0.00 2.74
392 393 0.105862 TCCCCATACGACCTCCGATT 60.106 55.000 0.00 0.00 41.76 3.34
411 412 4.508124 CGATTTGTGACTTCCTACTATGCC 59.492 45.833 0.00 0.00 0.00 4.40
414 415 3.441101 TGTGACTTCCTACTATGCCAGT 58.559 45.455 0.00 0.00 41.62 4.00
424 425 2.389715 ACTATGCCAGTCACCCTACTC 58.610 52.381 0.00 0.00 28.33 2.59
456 475 0.031585 CTCCAACTCCGACGTGACAA 59.968 55.000 0.00 0.00 0.00 3.18
514 533 0.108019 GAAACGAGTGGGAACTGGGT 59.892 55.000 0.00 0.00 0.00 4.51
602 621 0.037590 ATGTCCCTTTGCGCAGGTTA 59.962 50.000 11.31 2.98 30.96 2.85
667 686 0.468226 TGGACGCTCACAAACCTTCT 59.532 50.000 0.00 0.00 0.00 2.85
677 696 4.792068 TCACAAACCTTCTCCATCTTTGT 58.208 39.130 0.00 0.00 35.85 2.83
683 702 5.053978 ACCTTCTCCATCTTTGTTTCTGT 57.946 39.130 0.00 0.00 0.00 3.41
743 788 0.905357 GTGTCTGGGCCATACTGTCT 59.095 55.000 21.04 0.00 0.00 3.41
756 801 5.620654 GCCATACTGTCTAGACGTTTACACA 60.621 44.000 17.85 3.88 0.00 3.72
757 802 6.384224 CCATACTGTCTAGACGTTTACACAA 58.616 40.000 17.85 3.26 0.00 3.33
770 815 2.627863 TACACAATGTTTGATGCGCC 57.372 45.000 4.18 0.00 0.00 6.53
842 2066 2.357637 TCAACTTCAGCCCAAAGAAACG 59.642 45.455 0.00 0.00 0.00 3.60
933 2161 0.984995 CCCTCCCGTTTTTCCTCTCT 59.015 55.000 0.00 0.00 0.00 3.10
952 2180 3.783082 CTCTCCCTCCTACCAAATTTCCT 59.217 47.826 0.00 0.00 0.00 3.36
956 2184 4.606255 TCCCTCCTACCAAATTTCCTTCTT 59.394 41.667 0.00 0.00 0.00 2.52
1386 2614 1.550327 ACGCAGAGGAGAAGATGTCA 58.450 50.000 0.00 0.00 0.00 3.58
2349 3577 1.869767 CTTTCTCTGCATACATCGCCC 59.130 52.381 0.00 0.00 0.00 6.13
2502 3731 3.381272 CCATGGCAAATTATGTTCTCCGT 59.619 43.478 0.00 0.00 0.00 4.69
2503 3732 4.498009 CCATGGCAAATTATGTTCTCCGTC 60.498 45.833 0.00 0.00 0.00 4.79
2522 3751 4.555262 CGTCAATGGCAAATTTAGTTGGT 58.445 39.130 0.00 0.00 0.00 3.67
2548 3777 6.363357 GGAAAATCCGTCTCAGTTCATTTTTG 59.637 38.462 0.00 0.00 0.00 2.44
2552 3781 7.687941 ATCCGTCTCAGTTCATTTTTGTATT 57.312 32.000 0.00 0.00 0.00 1.89
2572 3801 8.177119 TGTATTAGAAAATTGTTGGACTTGCT 57.823 30.769 0.00 0.00 0.00 3.91
2583 3812 5.971763 TGTTGGACTTGCTAACAAATTTGT 58.028 33.333 18.13 18.13 43.79 2.83
2587 3816 6.815089 TGGACTTGCTAACAAATTTGTCATT 58.185 32.000 23.47 11.33 41.31 2.57
2612 3841 4.340666 TCGCACCAATATAAATTGCCATGT 59.659 37.500 0.00 0.00 41.06 3.21
2617 3846 8.334632 GCACCAATATAAATTGCCATGTAAAAC 58.665 33.333 0.00 0.00 41.06 2.43
2631 3860 6.417635 GCCATGTAAAACATCATATTTGTCCG 59.582 38.462 0.00 0.00 36.53 4.79
2656 3885 8.066000 CGGTCTAAAAATCTGACGTTAGTTTTT 58.934 33.333 23.19 23.19 36.37 1.94
2666 3895 8.882415 TCTGACGTTAGTTTTTAGAGAAATGT 57.118 30.769 7.27 0.00 0.00 2.71
2667 3896 8.975439 TCTGACGTTAGTTTTTAGAGAAATGTC 58.025 33.333 7.27 0.00 34.81 3.06
2668 3897 8.882415 TGACGTTAGTTTTTAGAGAAATGTCT 57.118 30.769 0.00 0.00 35.12 3.41
2669 3898 9.970395 TGACGTTAGTTTTTAGAGAAATGTCTA 57.030 29.630 0.00 0.00 35.12 2.59
2675 3904 8.910351 AGTTTTTAGAGAAATGTCTAACAGCT 57.090 30.769 0.00 0.00 38.49 4.24
2676 3905 8.994170 AGTTTTTAGAGAAATGTCTAACAGCTC 58.006 33.333 0.00 0.00 38.49 4.09
2677 3906 7.907214 TTTTAGAGAAATGTCTAACAGCTCC 57.093 36.000 0.00 0.00 38.49 4.70
2678 3907 4.479786 AGAGAAATGTCTAACAGCTCCC 57.520 45.455 0.00 0.00 32.80 4.30
2679 3908 3.118956 AGAGAAATGTCTAACAGCTCCCG 60.119 47.826 0.00 0.00 32.80 5.14
2680 3909 2.093447 AGAAATGTCTAACAGCTCCCGG 60.093 50.000 0.00 0.00 29.93 5.73
2681 3910 0.541863 AATGTCTAACAGCTCCCGGG 59.458 55.000 16.85 16.85 0.00 5.73
2682 3911 0.617820 ATGTCTAACAGCTCCCGGGT 60.618 55.000 22.86 1.40 0.00 5.28
2684 3913 2.125106 CTAACAGCTCCCGGGTGC 60.125 66.667 35.10 35.10 46.30 5.01
2685 3914 3.682292 CTAACAGCTCCCGGGTGCC 62.682 68.421 37.33 22.60 46.30 5.01
2701 3930 3.359695 GTGCCCCTACACCTTTATGAA 57.640 47.619 0.00 0.00 34.35 2.57
2702 3931 3.014623 GTGCCCCTACACCTTTATGAAC 58.985 50.000 0.00 0.00 34.35 3.18
2703 3932 2.645297 TGCCCCTACACCTTTATGAACA 59.355 45.455 0.00 0.00 0.00 3.18
2704 3933 3.279434 GCCCCTACACCTTTATGAACAG 58.721 50.000 0.00 0.00 0.00 3.16
2705 3934 3.308188 GCCCCTACACCTTTATGAACAGT 60.308 47.826 0.00 0.00 0.00 3.55
2706 3935 4.080751 GCCCCTACACCTTTATGAACAGTA 60.081 45.833 0.00 0.00 0.00 2.74
2707 3936 5.572066 GCCCCTACACCTTTATGAACAGTAA 60.572 44.000 0.00 0.00 0.00 2.24
2708 3937 6.478129 CCCCTACACCTTTATGAACAGTAAA 58.522 40.000 0.00 0.00 0.00 2.01
2709 3938 7.116736 CCCCTACACCTTTATGAACAGTAAAT 58.883 38.462 0.00 0.00 0.00 1.40
2710 3939 7.614192 CCCCTACACCTTTATGAACAGTAAATT 59.386 37.037 0.00 0.00 0.00 1.82
2711 3940 8.674607 CCCTACACCTTTATGAACAGTAAATTC 58.325 37.037 0.00 0.00 0.00 2.17
2712 3941 9.226606 CCTACACCTTTATGAACAGTAAATTCA 57.773 33.333 0.00 0.00 40.25 2.57
2763 3992 4.617253 TGAAACTTTCAGGGATCGAAGA 57.383 40.909 0.00 0.00 36.05 2.87
2764 3993 5.165961 TGAAACTTTCAGGGATCGAAGAT 57.834 39.130 0.00 0.00 36.43 2.40
2765 3994 5.560724 TGAAACTTTCAGGGATCGAAGATT 58.439 37.500 0.00 0.00 36.43 2.40
2766 3995 6.707290 TGAAACTTTCAGGGATCGAAGATTA 58.293 36.000 0.00 0.00 36.43 1.75
2767 3996 7.338710 TGAAACTTTCAGGGATCGAAGATTAT 58.661 34.615 0.00 0.00 36.43 1.28
2768 3997 7.495934 TGAAACTTTCAGGGATCGAAGATTATC 59.504 37.037 0.00 0.00 36.43 1.75
2769 3998 6.485830 ACTTTCAGGGATCGAAGATTATCA 57.514 37.500 0.00 0.00 45.12 2.15
2770 3999 6.889198 ACTTTCAGGGATCGAAGATTATCAA 58.111 36.000 0.00 0.00 45.12 2.57
2771 4000 7.338710 ACTTTCAGGGATCGAAGATTATCAAA 58.661 34.615 0.00 0.00 45.12 2.69
2772 4001 7.497249 ACTTTCAGGGATCGAAGATTATCAAAG 59.503 37.037 0.00 0.00 45.12 2.77
2773 4002 5.858381 TCAGGGATCGAAGATTATCAAAGG 58.142 41.667 0.00 0.00 45.12 3.11
2774 4003 5.366768 TCAGGGATCGAAGATTATCAAAGGT 59.633 40.000 0.00 0.00 45.12 3.50
2775 4004 6.058183 CAGGGATCGAAGATTATCAAAGGTT 58.942 40.000 0.00 0.00 45.12 3.50
2776 4005 6.543831 CAGGGATCGAAGATTATCAAAGGTTT 59.456 38.462 0.00 0.00 45.12 3.27
2777 4006 6.543831 AGGGATCGAAGATTATCAAAGGTTTG 59.456 38.462 0.00 0.00 45.12 2.93
2778 4007 6.542370 GGGATCGAAGATTATCAAAGGTTTGA 59.458 38.462 7.58 7.58 46.59 2.69
2788 4017 3.295093 TCAAAGGTTTGATGTTCCTGCA 58.705 40.909 0.87 0.00 41.88 4.41
2789 4018 3.703556 TCAAAGGTTTGATGTTCCTGCAA 59.296 39.130 0.87 0.00 41.88 4.08
2790 4019 4.161189 TCAAAGGTTTGATGTTCCTGCAAA 59.839 37.500 0.87 0.00 41.88 3.68
2791 4020 4.326504 AAGGTTTGATGTTCCTGCAAAG 57.673 40.909 0.00 0.00 32.76 2.77
2792 4021 3.299503 AGGTTTGATGTTCCTGCAAAGT 58.700 40.909 0.00 0.00 32.76 2.66
2793 4022 3.706086 AGGTTTGATGTTCCTGCAAAGTT 59.294 39.130 0.00 0.00 32.76 2.66
2794 4023 4.162131 AGGTTTGATGTTCCTGCAAAGTTT 59.838 37.500 0.00 0.00 32.76 2.66
2795 4024 4.507756 GGTTTGATGTTCCTGCAAAGTTTC 59.492 41.667 0.00 0.00 32.76 2.78
2796 4025 4.998671 TTGATGTTCCTGCAAAGTTTCA 57.001 36.364 0.00 0.00 0.00 2.69
2797 4026 4.572985 TGATGTTCCTGCAAAGTTTCAG 57.427 40.909 0.00 7.63 0.00 3.02
2798 4027 2.869233 TGTTCCTGCAAAGTTTCAGC 57.131 45.000 8.64 1.41 0.00 4.26
2799 4028 2.098614 TGTTCCTGCAAAGTTTCAGCA 58.901 42.857 1.19 1.19 36.72 4.41
2800 4029 2.495270 TGTTCCTGCAAAGTTTCAGCAA 59.505 40.909 2.65 0.00 37.89 3.91
2801 4030 2.860136 GTTCCTGCAAAGTTTCAGCAAC 59.140 45.455 2.65 4.72 37.89 4.17
2802 4031 2.098614 TCCTGCAAAGTTTCAGCAACA 58.901 42.857 2.65 0.00 37.93 3.33
2803 4032 2.495270 TCCTGCAAAGTTTCAGCAACAA 59.505 40.909 2.65 0.00 37.93 2.83
2804 4033 3.056250 TCCTGCAAAGTTTCAGCAACAAA 60.056 39.130 2.65 0.00 37.93 2.83
2805 4034 3.872771 CCTGCAAAGTTTCAGCAACAAAT 59.127 39.130 2.65 0.00 37.93 2.32
2806 4035 5.049167 CCTGCAAAGTTTCAGCAACAAATA 58.951 37.500 2.65 0.00 37.93 1.40
2807 4036 5.523188 CCTGCAAAGTTTCAGCAACAAATAA 59.477 36.000 2.65 0.00 37.93 1.40
2808 4037 6.343226 TGCAAAGTTTCAGCAACAAATAAC 57.657 33.333 0.00 0.00 37.93 1.89
2809 4038 5.293079 TGCAAAGTTTCAGCAACAAATAACC 59.707 36.000 0.00 0.00 37.93 2.85
2810 4039 5.523552 GCAAAGTTTCAGCAACAAATAACCT 59.476 36.000 0.00 0.00 37.93 3.50
2811 4040 6.037062 GCAAAGTTTCAGCAACAAATAACCTT 59.963 34.615 0.00 0.00 37.93 3.50
2812 4041 7.621102 CAAAGTTTCAGCAACAAATAACCTTC 58.379 34.615 0.00 0.00 37.93 3.46
2813 4042 5.519722 AGTTTCAGCAACAAATAACCTTCG 58.480 37.500 0.00 0.00 37.93 3.79
2814 4043 5.067283 AGTTTCAGCAACAAATAACCTTCGT 59.933 36.000 0.00 0.00 37.93 3.85
2815 4044 4.481930 TCAGCAACAAATAACCTTCGTG 57.518 40.909 0.00 0.00 0.00 4.35
2816 4045 3.252215 TCAGCAACAAATAACCTTCGTGG 59.748 43.478 0.00 0.00 42.93 4.94
2817 4046 3.252215 CAGCAACAAATAACCTTCGTGGA 59.748 43.478 4.38 0.00 39.71 4.02
2818 4047 3.502211 AGCAACAAATAACCTTCGTGGAG 59.498 43.478 4.38 0.00 39.71 3.86
2819 4048 3.821841 CAACAAATAACCTTCGTGGAGC 58.178 45.455 4.38 0.00 39.71 4.70
2820 4049 2.433436 ACAAATAACCTTCGTGGAGCC 58.567 47.619 4.38 0.00 39.71 4.70
2821 4050 1.743394 CAAATAACCTTCGTGGAGCCC 59.257 52.381 4.38 0.00 39.71 5.19
2822 4051 1.286248 AATAACCTTCGTGGAGCCCT 58.714 50.000 4.38 0.00 39.71 5.19
2823 4052 0.831307 ATAACCTTCGTGGAGCCCTC 59.169 55.000 4.38 0.00 39.71 4.30
2824 4053 0.543410 TAACCTTCGTGGAGCCCTCA 60.543 55.000 4.38 0.00 39.71 3.86
2825 4054 2.113243 AACCTTCGTGGAGCCCTCAC 62.113 60.000 4.38 0.00 39.71 3.51
2826 4055 2.266055 CTTCGTGGAGCCCTCACC 59.734 66.667 0.00 0.00 0.00 4.02
2827 4056 2.525629 TTCGTGGAGCCCTCACCA 60.526 61.111 0.00 0.00 0.00 4.17
2828 4057 2.111999 CTTCGTGGAGCCCTCACCAA 62.112 60.000 0.00 0.00 37.94 3.67
2829 4058 1.701031 TTCGTGGAGCCCTCACCAAA 61.701 55.000 0.00 0.00 37.94 3.28
2830 4059 1.228124 CGTGGAGCCCTCACCAAAA 60.228 57.895 0.00 0.00 37.94 2.44
2831 4060 0.821711 CGTGGAGCCCTCACCAAAAA 60.822 55.000 0.00 0.00 37.94 1.94
2853 4082 7.614124 AAAAACAAAATCACTGCTCAAACAT 57.386 28.000 0.00 0.00 0.00 2.71
2854 4083 6.592798 AAACAAAATCACTGCTCAAACATG 57.407 33.333 0.00 0.00 0.00 3.21
2855 4084 5.266733 ACAAAATCACTGCTCAAACATGT 57.733 34.783 0.00 0.00 0.00 3.21
2856 4085 6.389830 ACAAAATCACTGCTCAAACATGTA 57.610 33.333 0.00 0.00 0.00 2.29
2857 4086 6.208644 ACAAAATCACTGCTCAAACATGTAC 58.791 36.000 0.00 0.00 0.00 2.90
2858 4087 6.183360 ACAAAATCACTGCTCAAACATGTACA 60.183 34.615 0.00 0.00 0.00 2.90
2859 4088 6.579666 AAATCACTGCTCAAACATGTACAT 57.420 33.333 1.41 1.41 0.00 2.29
2860 4089 7.686438 AAATCACTGCTCAAACATGTACATA 57.314 32.000 8.32 0.00 0.00 2.29
2861 4090 7.686438 AATCACTGCTCAAACATGTACATAA 57.314 32.000 8.32 0.00 0.00 1.90
2862 4091 7.686438 ATCACTGCTCAAACATGTACATAAA 57.314 32.000 8.32 0.00 0.00 1.40
2863 4092 6.898041 TCACTGCTCAAACATGTACATAAAC 58.102 36.000 8.32 0.00 0.00 2.01
2864 4093 6.710295 TCACTGCTCAAACATGTACATAAACT 59.290 34.615 8.32 0.00 0.00 2.66
2865 4094 7.228507 TCACTGCTCAAACATGTACATAAACTT 59.771 33.333 8.32 0.00 0.00 2.66
2866 4095 7.862372 CACTGCTCAAACATGTACATAAACTTT 59.138 33.333 8.32 1.60 0.00 2.66
2867 4096 7.862372 ACTGCTCAAACATGTACATAAACTTTG 59.138 33.333 8.32 12.87 0.00 2.77
2868 4097 7.935520 TGCTCAAACATGTACATAAACTTTGA 58.064 30.769 8.32 15.80 0.00 2.69
2869 4098 8.409371 TGCTCAAACATGTACATAAACTTTGAA 58.591 29.630 19.94 11.10 0.00 2.69
2870 4099 8.690840 GCTCAAACATGTACATAAACTTTGAAC 58.309 33.333 19.94 15.70 0.00 3.18
2871 4100 9.729023 CTCAAACATGTACATAAACTTTGAACA 57.271 29.630 19.94 8.17 0.00 3.18
2908 4137 6.801539 TTTATTTGAGTGCTCTTCGAATGT 57.198 33.333 0.00 0.00 0.00 2.71
2909 4138 6.801539 TTATTTGAGTGCTCTTCGAATGTT 57.198 33.333 0.00 0.00 0.00 2.71
2910 4139 7.899178 TTATTTGAGTGCTCTTCGAATGTTA 57.101 32.000 0.00 0.00 0.00 2.41
2911 4140 6.992063 ATTTGAGTGCTCTTCGAATGTTAT 57.008 33.333 0.00 0.00 0.00 1.89
2912 4141 6.801539 TTTGAGTGCTCTTCGAATGTTATT 57.198 33.333 0.00 0.00 0.00 1.40
2913 4142 6.801539 TTGAGTGCTCTTCGAATGTTATTT 57.198 33.333 0.00 0.00 0.00 1.40
2914 4143 6.801539 TGAGTGCTCTTCGAATGTTATTTT 57.198 33.333 0.00 0.00 0.00 1.82
2915 4144 7.202016 TGAGTGCTCTTCGAATGTTATTTTT 57.798 32.000 0.00 0.00 0.00 1.94
2916 4145 8.317891 TGAGTGCTCTTCGAATGTTATTTTTA 57.682 30.769 0.00 0.00 0.00 1.52
2917 4146 8.443160 TGAGTGCTCTTCGAATGTTATTTTTAG 58.557 33.333 0.00 0.00 0.00 1.85
2918 4147 7.244192 AGTGCTCTTCGAATGTTATTTTTAGC 58.756 34.615 0.00 0.00 0.00 3.09
2919 4148 7.119846 AGTGCTCTTCGAATGTTATTTTTAGCT 59.880 33.333 0.00 0.00 0.00 3.32
2920 4149 8.388103 GTGCTCTTCGAATGTTATTTTTAGCTA 58.612 33.333 0.00 0.00 0.00 3.32
2921 4150 8.941977 TGCTCTTCGAATGTTATTTTTAGCTAA 58.058 29.630 0.86 0.86 0.00 3.09
2922 4151 9.769093 GCTCTTCGAATGTTATTTTTAGCTAAA 57.231 29.630 14.96 14.96 0.00 1.85
2936 4165 7.851822 TTTTAGCTAAAACTTTGCAAGATCG 57.148 32.000 24.42 0.00 30.83 3.69
2937 4166 6.554334 TTAGCTAAAACTTTGCAAGATCGT 57.446 33.333 2.97 0.00 0.00 3.73
2938 4167 5.035784 AGCTAAAACTTTGCAAGATCGTC 57.964 39.130 0.00 0.00 0.00 4.20
2939 4168 4.515191 AGCTAAAACTTTGCAAGATCGTCA 59.485 37.500 0.00 0.00 0.00 4.35
2940 4169 5.008613 AGCTAAAACTTTGCAAGATCGTCAA 59.991 36.000 0.00 0.00 0.00 3.18
2941 4170 5.685511 GCTAAAACTTTGCAAGATCGTCAAA 59.314 36.000 0.00 8.85 0.00 2.69
2942 4171 6.198216 GCTAAAACTTTGCAAGATCGTCAAAA 59.802 34.615 0.00 0.40 30.47 2.44
2943 4172 6.573617 AAAACTTTGCAAGATCGTCAAAAG 57.426 33.333 0.00 9.60 30.47 2.27
2944 4173 4.900635 ACTTTGCAAGATCGTCAAAAGT 57.099 36.364 0.00 10.55 30.47 2.66
2945 4174 5.248870 ACTTTGCAAGATCGTCAAAAGTT 57.751 34.783 0.00 0.38 30.47 2.66
2946 4175 5.650543 ACTTTGCAAGATCGTCAAAAGTTT 58.349 33.333 0.00 0.00 30.47 2.66
2947 4176 5.743872 ACTTTGCAAGATCGTCAAAAGTTTC 59.256 36.000 0.00 0.00 30.47 2.78
2948 4177 4.891627 TGCAAGATCGTCAAAAGTTTCA 57.108 36.364 0.00 0.00 0.00 2.69
2949 4178 5.437289 TGCAAGATCGTCAAAAGTTTCAT 57.563 34.783 0.00 0.00 0.00 2.57
2950 4179 5.214417 TGCAAGATCGTCAAAAGTTTCATG 58.786 37.500 0.00 0.00 0.00 3.07
2951 4180 5.008514 TGCAAGATCGTCAAAAGTTTCATGA 59.991 36.000 0.00 0.00 0.00 3.07
2952 4181 6.088824 GCAAGATCGTCAAAAGTTTCATGAT 58.911 36.000 0.00 0.00 0.00 2.45
2953 4182 6.033196 GCAAGATCGTCAAAAGTTTCATGATG 59.967 38.462 0.00 5.43 0.00 3.07
2954 4183 6.808008 AGATCGTCAAAAGTTTCATGATGT 57.192 33.333 0.00 2.87 33.02 3.06
2955 4184 7.206981 AGATCGTCAAAAGTTTCATGATGTT 57.793 32.000 0.00 2.51 33.02 2.71
2956 4185 7.301054 AGATCGTCAAAAGTTTCATGATGTTC 58.699 34.615 0.00 9.48 33.02 3.18
2957 4186 5.439828 TCGTCAAAAGTTTCATGATGTTCG 58.560 37.500 0.00 1.69 33.02 3.95
2958 4187 5.235401 TCGTCAAAAGTTTCATGATGTTCGA 59.765 36.000 0.00 3.90 33.02 3.71
2959 4188 6.073276 TCGTCAAAAGTTTCATGATGTTCGAT 60.073 34.615 0.00 0.00 33.02 3.59
2960 4189 6.031729 CGTCAAAAGTTTCATGATGTTCGATG 59.968 38.462 0.00 0.00 0.00 3.84
2961 4190 6.857964 GTCAAAAGTTTCATGATGTTCGATGT 59.142 34.615 0.00 0.00 0.00 3.06
2962 4191 7.059945 GTCAAAAGTTTCATGATGTTCGATGTC 59.940 37.037 0.00 0.00 0.00 3.06
2963 4192 5.551760 AAGTTTCATGATGTTCGATGTCC 57.448 39.130 0.00 0.00 0.00 4.02
2964 4193 4.578871 AGTTTCATGATGTTCGATGTCCA 58.421 39.130 0.00 0.00 0.00 4.02
2965 4194 5.003160 AGTTTCATGATGTTCGATGTCCAA 58.997 37.500 0.00 0.00 0.00 3.53
2966 4195 5.473162 AGTTTCATGATGTTCGATGTCCAAA 59.527 36.000 0.00 0.00 0.00 3.28
2967 4196 5.550232 TTCATGATGTTCGATGTCCAAAG 57.450 39.130 0.00 0.00 0.00 2.77
2968 4197 4.578871 TCATGATGTTCGATGTCCAAAGT 58.421 39.130 0.00 0.00 0.00 2.66
2969 4198 5.003160 TCATGATGTTCGATGTCCAAAGTT 58.997 37.500 0.00 0.00 0.00 2.66
2970 4199 5.473162 TCATGATGTTCGATGTCCAAAGTTT 59.527 36.000 0.00 0.00 0.00 2.66
2971 4200 5.356882 TGATGTTCGATGTCCAAAGTTTC 57.643 39.130 0.00 0.00 0.00 2.78
2972 4201 4.819088 TGATGTTCGATGTCCAAAGTTTCA 59.181 37.500 0.00 0.00 0.00 2.69
2973 4202 4.811555 TGTTCGATGTCCAAAGTTTCAG 57.188 40.909 0.00 0.00 0.00 3.02
2974 4203 4.447290 TGTTCGATGTCCAAAGTTTCAGA 58.553 39.130 0.00 0.00 0.00 3.27
2975 4204 5.063204 TGTTCGATGTCCAAAGTTTCAGAT 58.937 37.500 0.00 0.00 0.00 2.90
2976 4205 5.530915 TGTTCGATGTCCAAAGTTTCAGATT 59.469 36.000 0.00 0.00 0.00 2.40
2977 4206 6.039270 TGTTCGATGTCCAAAGTTTCAGATTT 59.961 34.615 0.00 0.00 0.00 2.17
2978 4207 6.633500 TCGATGTCCAAAGTTTCAGATTTT 57.367 33.333 0.00 0.00 0.00 1.82
2979 4208 7.038154 TCGATGTCCAAAGTTTCAGATTTTT 57.962 32.000 0.00 0.00 0.00 1.94
3014 4243 8.792633 TGTTTTGAATTTACTGTTCATAGAGGG 58.207 33.333 0.00 0.00 35.68 4.30
3015 4244 8.793592 GTTTTGAATTTACTGTTCATAGAGGGT 58.206 33.333 0.00 0.00 35.68 4.34
3016 4245 7.921786 TTGAATTTACTGTTCATAGAGGGTG 57.078 36.000 0.00 0.00 35.68 4.61
3017 4246 7.016153 TGAATTTACTGTTCATAGAGGGTGT 57.984 36.000 0.00 0.00 31.07 4.16
3018 4247 8.141298 TGAATTTACTGTTCATAGAGGGTGTA 57.859 34.615 0.00 0.00 31.07 2.90
3019 4248 8.258007 TGAATTTACTGTTCATAGAGGGTGTAG 58.742 37.037 0.00 0.00 31.07 2.74
3020 4249 6.540438 TTTACTGTTCATAGAGGGTGTAGG 57.460 41.667 0.00 0.00 0.00 3.18
3021 4250 3.375699 ACTGTTCATAGAGGGTGTAGGG 58.624 50.000 0.00 0.00 0.00 3.53
3022 4251 2.700897 CTGTTCATAGAGGGTGTAGGGG 59.299 54.545 0.00 0.00 0.00 4.79
3023 4252 1.416772 GTTCATAGAGGGTGTAGGGGC 59.583 57.143 0.00 0.00 0.00 5.80
3024 4253 0.639943 TCATAGAGGGTGTAGGGGCA 59.360 55.000 0.00 0.00 0.00 5.36
3025 4254 0.759346 CATAGAGGGTGTAGGGGCAC 59.241 60.000 0.00 0.00 38.56 5.01
3042 4271 1.619654 CACCTGGGTGCTGAAAATCA 58.380 50.000 6.84 0.00 39.39 2.57
3043 4272 2.173519 CACCTGGGTGCTGAAAATCAT 58.826 47.619 6.84 0.00 39.39 2.45
3044 4273 2.094390 CACCTGGGTGCTGAAAATCATG 60.094 50.000 6.84 0.00 39.39 3.07
3045 4274 2.173519 CCTGGGTGCTGAAAATCATGT 58.826 47.619 0.00 0.00 0.00 3.21
3046 4275 2.165030 CCTGGGTGCTGAAAATCATGTC 59.835 50.000 0.00 0.00 0.00 3.06
3047 4276 3.087031 CTGGGTGCTGAAAATCATGTCT 58.913 45.455 0.00 0.00 0.00 3.41
3048 4277 3.084039 TGGGTGCTGAAAATCATGTCTC 58.916 45.455 0.00 0.00 0.00 3.36
3049 4278 3.245016 TGGGTGCTGAAAATCATGTCTCT 60.245 43.478 0.00 0.00 0.00 3.10
3050 4279 4.019411 TGGGTGCTGAAAATCATGTCTCTA 60.019 41.667 0.00 0.00 0.00 2.43
3051 4280 4.574013 GGGTGCTGAAAATCATGTCTCTAG 59.426 45.833 0.00 0.00 0.00 2.43
3052 4281 5.181748 GGTGCTGAAAATCATGTCTCTAGT 58.818 41.667 0.00 0.00 0.00 2.57
3053 4282 5.645497 GGTGCTGAAAATCATGTCTCTAGTT 59.355 40.000 0.00 0.00 0.00 2.24
3066 4295 9.052759 TCATGTCTCTAGTTTTTAAGTGTTTCC 57.947 33.333 0.00 0.00 0.00 3.13
3119 4348 9.701098 TTGCCGTACTAGATAATTATAAAGTGG 57.299 33.333 16.87 13.01 0.00 4.00
3120 4349 9.081204 TGCCGTACTAGATAATTATAAAGTGGA 57.919 33.333 16.87 4.89 0.00 4.02
3121 4350 9.570488 GCCGTACTAGATAATTATAAAGTGGAG 57.430 37.037 16.87 10.47 0.00 3.86
3227 4456 4.166725 TCCCTGCCTAATTCTCATGATGTT 59.833 41.667 0.00 0.00 0.00 2.71
3363 4608 3.503363 TCAGCTTGCTGGTTGTGAAATAG 59.497 43.478 20.62 0.00 0.00 1.73
3393 4638 2.293677 CGCACATCTATACCCGAGAAGT 59.706 50.000 0.00 0.00 0.00 3.01
3441 4686 9.087424 GTATCATAAACTCATAGCGCATCATAA 57.913 33.333 11.47 0.00 0.00 1.90
3532 4779 6.544928 TTCATAGGTGGCGATGTATGATAT 57.455 37.500 4.53 0.00 33.11 1.63
3572 4819 6.688578 TCGTGAGGATCTAATATTGCTTACC 58.311 40.000 0.00 0.00 34.92 2.85
3578 4825 8.045720 AGGATCTAATATTGCTTACCAGGAAA 57.954 34.615 0.00 0.00 33.45 3.13
3614 4861 5.897377 AATGAAGTATGGTTAAGTGCCAC 57.103 39.130 0.00 0.00 39.03 5.01
3658 4905 8.204160 GCCTTTTAGGAGTTAATGCCATTTTAT 58.796 33.333 0.00 0.00 37.67 1.40
3665 4912 9.657419 AGGAGTTAATGCCATTTTATCTTTTTG 57.343 29.630 0.00 0.00 0.00 2.44
3681 4928 6.040209 TCTTTTTGGAATAGTAGCCACGTA 57.960 37.500 0.00 0.00 33.01 3.57
3690 4937 7.654520 TGGAATAGTAGCCACGTATTTCATTAC 59.345 37.037 0.00 0.00 0.00 1.89
3708 4955 5.297278 TCATTACACAACAAGGGTTACACAC 59.703 40.000 0.00 0.00 34.87 3.82
3713 4960 4.020543 ACAACAAGGGTTACACACAACAT 58.979 39.130 0.00 0.00 34.87 2.71
3725 4972 3.740832 ACACACAACATACACGATCACTG 59.259 43.478 0.00 0.00 0.00 3.66
3733 4980 2.994995 ACGATCACTGTCCCGGCA 60.995 61.111 0.00 0.00 0.00 5.69
3793 5041 1.412710 TGCACAAAGGACTCTCGAAGT 59.587 47.619 0.71 0.71 42.42 3.01
3807 5055 9.887406 GGACTCTCGAAGTAGAAGAAAATATAG 57.113 37.037 1.08 0.00 38.74 1.31
3838 5086 4.344102 TCTTGTAGAACCTTGTACACTGCT 59.656 41.667 0.00 0.00 36.76 4.24
3845 5093 1.463444 CCTTGTACACTGCTAAACCGC 59.537 52.381 0.00 0.00 0.00 5.68
3872 5120 1.908793 ATAGGACTATGGCGCCGCT 60.909 57.895 23.90 14.61 0.00 5.52
3903 5151 4.473477 CCCGATAAGTAGGGGAATCATC 57.527 50.000 0.00 0.00 44.10 2.92
3922 5170 6.018589 TCATCGCCACAAGAAGATCTATAG 57.981 41.667 0.00 0.00 0.00 1.31
3981 5229 2.438975 CGGCCCACTGCACATGAT 60.439 61.111 0.00 0.00 43.89 2.45
4156 5404 0.038159 GTGACTCCTCCTGTTGTCGG 60.038 60.000 0.00 0.00 32.64 4.79
4243 5491 3.883489 CTCGATGTGACCCTATCTACACA 59.117 47.826 0.00 0.00 45.06 3.72
4252 5500 6.535508 GTGACCCTATCTACACATCAAAGTTC 59.464 42.308 0.00 0.00 34.05 3.01
4298 5546 1.133809 TCTTGGGGGAGGTGGACAAG 61.134 60.000 0.00 0.00 39.76 3.16
4357 5605 4.204799 GGGAAATATGTCACCACCCTAAC 58.795 47.826 0.00 0.00 33.79 2.34
4380 5628 1.596934 CTTGTAGGAGGCAGCGGAA 59.403 57.895 0.00 0.00 0.00 4.30
4395 5643 1.351017 GCGGAAATCATGGGGGATCTA 59.649 52.381 0.00 0.00 0.00 1.98
4399 5647 4.401925 GGAAATCATGGGGGATCTACAAG 58.598 47.826 0.00 0.00 0.00 3.16
4413 5661 8.027189 GGGGATCTACAAGTTTATGTTGTTTTC 58.973 37.037 0.00 0.00 38.98 2.29
4551 5800 4.261994 GGCACTTTGTTTTTCTGATAGCCA 60.262 41.667 0.00 0.00 37.23 4.75
4574 5823 2.818921 TGCTAAGGTTGGATTGGCAAT 58.181 42.857 13.54 13.54 40.59 3.56
4615 5864 8.565896 TTATGAACTATGTTGAAGCTTGATGT 57.434 30.769 2.10 0.00 0.00 3.06
4719 5968 2.076100 TGCTACTTTGACCTTGCATCG 58.924 47.619 0.00 0.00 0.00 3.84
4733 5982 1.878734 TGCATCGATGTTGCTTGTTCA 59.121 42.857 25.47 9.55 40.77 3.18
4781 6030 4.057224 GTGAACATGGGTGCACGA 57.943 55.556 11.45 0.00 43.48 4.35
4943 6194 7.218963 GGATCTCGAAATTACTTCAAACATTGC 59.781 37.037 0.00 0.00 33.17 3.56
4958 6209 6.424509 TCAAACATTGCCTTTTTATTGCTCTG 59.575 34.615 0.00 0.00 0.00 3.35
4959 6210 4.824289 ACATTGCCTTTTTATTGCTCTGG 58.176 39.130 0.00 0.00 0.00 3.86
4965 6216 6.821388 TGCCTTTTTATTGCTCTGGTTTTTA 58.179 32.000 0.00 0.00 0.00 1.52
4966 6217 7.275920 TGCCTTTTTATTGCTCTGGTTTTTAA 58.724 30.769 0.00 0.00 0.00 1.52
4968 6219 8.783093 GCCTTTTTATTGCTCTGGTTTTTAAAT 58.217 29.630 0.00 0.00 0.00 1.40
5140 6394 4.274950 TCTTCCAAAAATCCGTGTCTGTTC 59.725 41.667 0.00 0.00 0.00 3.18
5220 6474 2.101917 GGCATGCATTTACATTGGCTCT 59.898 45.455 21.36 0.00 0.00 4.09
5406 6660 9.615660 ATCTATTACATTACCAACCTCTCCATA 57.384 33.333 0.00 0.00 0.00 2.74
5412 6666 6.160459 ACATTACCAACCTCTCCATATTTCCT 59.840 38.462 0.00 0.00 0.00 3.36
5504 6758 2.305009 GCTTAAGGCTCCAATGCTCAT 58.695 47.619 4.29 0.00 38.06 2.90
5534 6788 5.715279 GCCCCCAAAAGTTCTAAGAAGTTAT 59.285 40.000 0.00 0.00 0.00 1.89
5624 6878 5.188751 GCTCTCCATTCTACCATAGCCTATT 59.811 44.000 0.00 0.00 0.00 1.73
5636 6890 6.431722 ACCATAGCCTATTGTTAAACATGGT 58.568 36.000 0.00 0.00 38.97 3.55
5660 6914 3.471680 CTTTGAGAAGTATAGCAGCCCC 58.528 50.000 0.00 0.00 0.00 5.80
5717 6973 6.602410 TTGCCTGATAATTCAAAATGGTGA 57.398 33.333 0.00 0.00 0.00 4.02
5800 7120 5.105106 TGGACATTTGAGGAGCTCGTATAAA 60.105 40.000 9.29 13.60 32.35 1.40
5848 7169 3.691575 TCAAAGTTTCTCACACACCCAA 58.308 40.909 0.00 0.00 0.00 4.12
5849 7170 4.082845 TCAAAGTTTCTCACACACCCAAA 58.917 39.130 0.00 0.00 0.00 3.28
5850 7171 4.524714 TCAAAGTTTCTCACACACCCAAAA 59.475 37.500 0.00 0.00 0.00 2.44
5851 7172 5.011125 TCAAAGTTTCTCACACACCCAAAAA 59.989 36.000 0.00 0.00 0.00 1.94
5890 7211 1.686355 TGTCCAACCACACCATGAAC 58.314 50.000 0.00 0.00 0.00 3.18
5901 7222 2.030893 ACACCATGAACATTTGCACGAG 60.031 45.455 0.00 0.00 0.00 4.18
5992 7314 8.740123 TTAAATTTACTGTTCACACTCAGGAA 57.260 30.769 0.00 0.00 36.17 3.36
6010 7332 2.614057 GGAATAATTGAGTCTGGGTGCG 59.386 50.000 0.00 0.00 0.00 5.34
6061 7383 0.615331 GATCTCCTTGCAGTGGGTCA 59.385 55.000 7.79 0.00 0.00 4.02
6143 7465 6.683974 ACCTTGTTACAGTCATTGCATATC 57.316 37.500 0.00 0.00 0.00 1.63
6146 7468 6.539826 CCTTGTTACAGTCATTGCATATCTGA 59.460 38.462 13.04 1.43 0.00 3.27
6160 7482 8.969260 TTGCATATCTGACATCTTGATTTAGT 57.031 30.769 0.00 0.00 0.00 2.24
6175 7497 2.732844 TTAGTTTTGGTGTTCCCCGT 57.267 45.000 0.00 0.00 0.00 5.28
6179 7501 2.953648 AGTTTTGGTGTTCCCCGTAAAG 59.046 45.455 0.00 0.00 0.00 1.85
6196 7518 8.186163 CCCCGTAAAGTGAAAATTATTTACCTC 58.814 37.037 0.00 0.00 35.62 3.85
6252 7574 1.067213 GGCCAATGCGGTAACAATGTT 60.067 47.619 3.43 3.43 38.85 2.71
6267 7589 3.894427 ACAATGTTGGGTTGATGTTGCTA 59.106 39.130 0.00 0.00 0.00 3.49
6421 7743 1.896220 ATTCTTGGCGTGCTCTTTCA 58.104 45.000 0.00 0.00 0.00 2.69
6431 7753 2.159734 CGTGCTCTTTCACTGATCTTGC 60.160 50.000 0.00 0.00 34.92 4.01
6512 7835 1.461127 GCGTTGTTGTTTTTGTTGCCA 59.539 42.857 0.00 0.00 0.00 4.92
6516 7839 4.033817 CGTTGTTGTTTTTGTTGCCATGAT 59.966 37.500 0.00 0.00 0.00 2.45
6522 7845 4.996122 TGTTTTTGTTGCCATGATGATTCC 59.004 37.500 0.00 0.00 0.00 3.01
6551 7874 9.806448 ATATGTTATACTGATGTTTTATGGCCA 57.194 29.630 8.56 8.56 0.00 5.36
6586 7909 6.911511 GGTACAAAACAAATTGCGTAGTACAA 59.088 34.615 15.74 0.00 33.52 2.41
6643 7966 4.517285 TGTTAAGAATGGGCAAGAGCTAG 58.483 43.478 0.00 0.00 41.70 3.42
6649 7972 2.124529 GGCAAGAGCTAGGGCACC 60.125 66.667 5.48 0.00 46.58 5.01
6694 8017 4.582701 TTTCCAAGTTAGCAATGTGTGG 57.417 40.909 0.00 0.00 0.00 4.17
6726 8050 6.760770 TGGTTCATTTTGTTTCTTTTAGGCAG 59.239 34.615 0.00 0.00 0.00 4.85
6738 8062 2.754946 TTAGGCAGTTAACTGGACCG 57.245 50.000 31.42 11.07 43.94 4.79
6760 8084 4.443315 CGCCCCATAGATGCATATCATACA 60.443 45.833 0.00 0.00 35.05 2.29
6952 8288 4.631131 TCGTATCGATCATTTTGGATGCT 58.369 39.130 0.00 0.00 0.00 3.79
6994 8330 0.471211 TCCTATGGCTTAGGGGTCGG 60.471 60.000 22.28 1.51 46.69 4.79
7021 8357 7.266400 GTCGAAGGACCTCATTTACTAAATCT 58.734 38.462 0.00 0.00 37.19 2.40
7047 8383 5.223449 AGTTCCTCGTTTAGTTCCATTCA 57.777 39.130 0.00 0.00 0.00 2.57
7051 8387 5.556915 TCCTCGTTTAGTTCCATTCAACAT 58.443 37.500 0.00 0.00 0.00 2.71
7060 8396 2.561187 TCCATTCAACATCCCTCCTCA 58.439 47.619 0.00 0.00 0.00 3.86
7077 8413 5.178096 TCCTCACTCATCTTTGGCAAATA 57.822 39.130 13.89 6.83 0.00 1.40
7096 8432 0.539986 ATTTTCCCGCGCTCCTCTAA 59.460 50.000 5.56 0.00 0.00 2.10
7300 8639 1.659098 GATAAGAAGGCGACCAACACG 59.341 52.381 0.00 0.00 0.00 4.49
7315 8654 1.909700 ACACGGGCATGAAGAACATT 58.090 45.000 0.00 0.00 37.07 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
80 81 1.000396 GCTTCATGGGAGGCAACCT 60.000 57.895 0.00 0.00 44.87 3.50
108 109 4.742167 CACTATGATCAAGCTTACTGACCG 59.258 45.833 0.00 0.00 0.00 4.79
133 134 1.680735 GTGTTTGCACCACCTTGATCA 59.319 47.619 4.66 0.00 39.61 2.92
159 160 6.392625 TCGTGAATGCTAGAAGCTATAGTT 57.607 37.500 0.84 0.00 42.97 2.24
162 163 6.575162 TCATCGTGAATGCTAGAAGCTATA 57.425 37.500 0.00 0.00 42.97 1.31
182 183 3.521126 ACTTACACAGGAGAAGGCATCAT 59.479 43.478 0.00 0.00 0.00 2.45
220 221 5.065914 CCTTTTGTGAGACATTTCCTCAGA 58.934 41.667 0.00 0.00 40.88 3.27
291 292 8.635765 TTTTTAAGGACTATCAAAGCTGTGAT 57.364 30.769 22.82 22.82 41.21 3.06
313 314 7.155328 CCTATATCATGCTCGTAGACCTTTTT 58.845 38.462 0.00 0.00 0.00 1.94
334 335 5.716979 TGCCTCTGAAGAGTAATACCCTAT 58.283 41.667 6.59 0.00 40.48 2.57
357 358 2.314549 TGGGGAATTTGCCTAGGTTCAT 59.685 45.455 11.31 0.00 0.00 2.57
378 379 2.758979 AGTCACAAATCGGAGGTCGTAT 59.241 45.455 0.00 0.00 40.32 3.06
380 381 0.966920 AGTCACAAATCGGAGGTCGT 59.033 50.000 0.00 0.00 40.32 4.34
392 393 3.838317 ACTGGCATAGTAGGAAGTCACAA 59.162 43.478 0.00 0.00 38.04 3.33
411 412 0.247736 GGTGCAGAGTAGGGTGACTG 59.752 60.000 0.00 0.00 0.00 3.51
414 415 1.228769 ACGGTGCAGAGTAGGGTGA 60.229 57.895 0.00 0.00 0.00 4.02
424 425 1.021390 GTTGGAGGATGACGGTGCAG 61.021 60.000 0.00 0.00 0.00 4.41
528 547 1.600638 CATGCTCTCTGCCCTGACA 59.399 57.895 0.00 0.00 42.00 3.58
602 621 1.344496 ACCCAGCTAGAACCTAGGCAT 60.344 52.381 9.30 0.00 0.00 4.40
667 686 5.067674 CCAACAAGACAGAAACAAAGATGGA 59.932 40.000 0.00 0.00 0.00 3.41
677 696 4.456535 TCCGAATTCCAACAAGACAGAAA 58.543 39.130 0.00 0.00 0.00 2.52
683 702 3.343617 GGACATCCGAATTCCAACAAGA 58.656 45.455 0.00 0.00 0.00 3.02
713 732 2.231235 GGCCCAGACACTAATTTTGTGG 59.769 50.000 14.06 4.23 39.52 4.17
743 788 6.367421 GCATCAAACATTGTGTAAACGTCTA 58.633 36.000 0.00 0.00 0.00 2.59
756 801 0.313672 AACACGGCGCATCAAACATT 59.686 45.000 10.83 0.00 0.00 2.71
757 802 0.387112 CAACACGGCGCATCAAACAT 60.387 50.000 10.83 0.00 0.00 2.71
770 815 2.158900 AGATAAGGGCATCTCCAACACG 60.159 50.000 0.00 0.00 36.21 4.49
842 2066 3.751479 AGGATGGTGTTTTCCTTTTGC 57.249 42.857 0.00 0.00 39.36 3.68
933 2161 4.183916 AGAAGGAAATTTGGTAGGAGGGA 58.816 43.478 0.00 0.00 0.00 4.20
1408 2636 1.175983 GCGATGGTCTCCTCGAGGAT 61.176 60.000 33.66 19.36 44.46 3.24
2312 3540 2.675658 AAGGCCCAACTGCTCTTAAA 57.324 45.000 0.00 0.00 0.00 1.52
2502 3731 4.590647 TCCACCAACTAAATTTGCCATTGA 59.409 37.500 0.00 0.00 0.00 2.57
2503 3732 4.892433 TCCACCAACTAAATTTGCCATTG 58.108 39.130 0.00 0.41 0.00 2.82
2522 3751 3.762407 TGAACTGAGACGGATTTTCCA 57.238 42.857 0.00 0.00 35.91 3.53
2552 3781 7.575414 TGTTAGCAAGTCCAACAATTTTCTA 57.425 32.000 0.00 0.00 0.00 2.10
2572 3801 6.914259 TGGTGCGATAATGACAAATTTGTTA 58.086 32.000 24.02 20.45 42.43 2.41
2583 3812 7.040132 TGGCAATTTATATTGGTGCGATAATGA 60.040 33.333 7.83 0.00 41.21 2.57
2587 3816 6.208402 ACATGGCAATTTATATTGGTGCGATA 59.792 34.615 7.83 0.00 41.21 2.92
2612 3841 9.451002 TTTAGACCGGACAAATATGATGTTTTA 57.549 29.630 9.46 0.00 0.00 1.52
2617 3846 8.840321 AGATTTTTAGACCGGACAAATATGATG 58.160 33.333 9.46 0.00 0.00 3.07
2656 3885 4.098044 CGGGAGCTGTTAGACATTTCTCTA 59.902 45.833 0.00 0.00 32.75 2.43
2658 3887 3.190874 CGGGAGCTGTTAGACATTTCTC 58.809 50.000 0.00 0.00 32.75 2.87
2659 3888 2.093447 CCGGGAGCTGTTAGACATTTCT 60.093 50.000 0.00 0.00 35.66 2.52
2660 3889 2.280628 CCGGGAGCTGTTAGACATTTC 58.719 52.381 0.00 0.00 0.00 2.17
2661 3890 1.065418 CCCGGGAGCTGTTAGACATTT 60.065 52.381 18.48 0.00 0.00 2.32
2662 3891 0.541863 CCCGGGAGCTGTTAGACATT 59.458 55.000 18.48 0.00 0.00 2.71
2663 3892 0.617820 ACCCGGGAGCTGTTAGACAT 60.618 55.000 32.02 0.00 0.00 3.06
2665 3894 1.218316 CACCCGGGAGCTGTTAGAC 59.782 63.158 32.02 0.00 0.00 2.59
2666 3895 2.656069 GCACCCGGGAGCTGTTAGA 61.656 63.158 32.83 0.00 0.00 2.10
2667 3896 2.125106 GCACCCGGGAGCTGTTAG 60.125 66.667 32.83 10.45 0.00 2.34
2668 3897 3.712907 GGCACCCGGGAGCTGTTA 61.713 66.667 36.82 0.00 32.43 2.41
2681 3910 3.014623 GTTCATAAAGGTGTAGGGGCAC 58.985 50.000 0.00 0.00 38.56 5.01
2682 3911 2.645297 TGTTCATAAAGGTGTAGGGGCA 59.355 45.455 0.00 0.00 0.00 5.36
2683 3912 3.279434 CTGTTCATAAAGGTGTAGGGGC 58.721 50.000 0.00 0.00 0.00 5.80
2684 3913 4.569719 ACTGTTCATAAAGGTGTAGGGG 57.430 45.455 0.00 0.00 0.00 4.79
2685 3914 8.575649 AATTTACTGTTCATAAAGGTGTAGGG 57.424 34.615 0.00 0.00 0.00 3.53
2686 3915 9.226606 TGAATTTACTGTTCATAAAGGTGTAGG 57.773 33.333 0.00 0.00 31.07 3.18
2742 3971 4.617253 TCTTCGATCCCTGAAAGTTTCA 57.383 40.909 17.16 17.16 38.17 2.69
2743 3972 7.495934 TGATAATCTTCGATCCCTGAAAGTTTC 59.504 37.037 8.75 8.75 0.00 2.78
2744 3973 7.338710 TGATAATCTTCGATCCCTGAAAGTTT 58.661 34.615 0.00 0.00 0.00 2.66
2745 3974 6.889198 TGATAATCTTCGATCCCTGAAAGTT 58.111 36.000 0.00 0.00 0.00 2.66
2746 3975 6.485830 TGATAATCTTCGATCCCTGAAAGT 57.514 37.500 0.00 0.00 0.00 2.66
2747 3976 7.041508 CCTTTGATAATCTTCGATCCCTGAAAG 60.042 40.741 0.00 0.00 0.00 2.62
2748 3977 6.767902 CCTTTGATAATCTTCGATCCCTGAAA 59.232 38.462 0.00 0.00 0.00 2.69
2749 3978 6.126768 ACCTTTGATAATCTTCGATCCCTGAA 60.127 38.462 0.00 0.00 0.00 3.02
2750 3979 5.366768 ACCTTTGATAATCTTCGATCCCTGA 59.633 40.000 0.00 0.00 0.00 3.86
2751 3980 5.615289 ACCTTTGATAATCTTCGATCCCTG 58.385 41.667 0.00 0.00 0.00 4.45
2752 3981 5.896073 ACCTTTGATAATCTTCGATCCCT 57.104 39.130 0.00 0.00 0.00 4.20
2753 3982 6.542370 TCAAACCTTTGATAATCTTCGATCCC 59.458 38.462 0.00 0.00 41.88 3.85
2754 3983 7.553881 TCAAACCTTTGATAATCTTCGATCC 57.446 36.000 0.00 0.00 41.88 3.36
2768 3997 3.731652 TGCAGGAACATCAAACCTTTG 57.268 42.857 0.00 0.00 39.48 2.77
2769 3998 4.162131 ACTTTGCAGGAACATCAAACCTTT 59.838 37.500 0.00 0.00 31.06 3.11
2770 3999 3.706086 ACTTTGCAGGAACATCAAACCTT 59.294 39.130 0.00 0.00 31.06 3.50
2771 4000 3.299503 ACTTTGCAGGAACATCAAACCT 58.700 40.909 0.00 0.00 31.06 3.50
2772 4001 3.733443 ACTTTGCAGGAACATCAAACC 57.267 42.857 0.00 0.00 31.06 3.27
2773 4002 5.108517 TGAAACTTTGCAGGAACATCAAAC 58.891 37.500 0.00 0.00 31.06 2.93
2774 4003 5.336150 TGAAACTTTGCAGGAACATCAAA 57.664 34.783 0.00 0.00 32.71 2.69
2775 4004 4.737352 GCTGAAACTTTGCAGGAACATCAA 60.737 41.667 0.00 0.00 32.83 2.57
2776 4005 3.243501 GCTGAAACTTTGCAGGAACATCA 60.244 43.478 0.00 0.00 32.83 3.07
2777 4006 3.243501 TGCTGAAACTTTGCAGGAACATC 60.244 43.478 0.00 0.00 32.83 3.06
2778 4007 2.694628 TGCTGAAACTTTGCAGGAACAT 59.305 40.909 0.00 0.00 32.83 2.71
2779 4008 2.098614 TGCTGAAACTTTGCAGGAACA 58.901 42.857 0.00 0.00 32.83 3.18
2780 4009 2.869233 TGCTGAAACTTTGCAGGAAC 57.131 45.000 0.00 0.00 32.83 3.62
2781 4010 2.495270 TGTTGCTGAAACTTTGCAGGAA 59.505 40.909 0.00 0.00 39.61 3.36
2782 4011 2.098614 TGTTGCTGAAACTTTGCAGGA 58.901 42.857 0.00 0.00 39.70 3.86
2783 4012 2.582728 TGTTGCTGAAACTTTGCAGG 57.417 45.000 0.00 0.00 39.70 4.85
2784 4013 6.413269 GTTATTTGTTGCTGAAACTTTGCAG 58.587 36.000 0.00 0.00 39.70 4.41
2785 4014 5.293079 GGTTATTTGTTGCTGAAACTTTGCA 59.707 36.000 0.00 0.00 39.70 4.08
2786 4015 5.523552 AGGTTATTTGTTGCTGAAACTTTGC 59.476 36.000 0.00 0.00 39.70 3.68
2787 4016 7.515059 CGAAGGTTATTTGTTGCTGAAACTTTG 60.515 37.037 0.00 0.00 39.70 2.77
2788 4017 6.475402 CGAAGGTTATTTGTTGCTGAAACTTT 59.525 34.615 0.00 0.00 39.70 2.66
2789 4018 5.977129 CGAAGGTTATTTGTTGCTGAAACTT 59.023 36.000 0.00 0.00 39.70 2.66
2790 4019 5.067283 ACGAAGGTTATTTGTTGCTGAAACT 59.933 36.000 0.00 0.00 39.70 2.66
2791 4020 5.173131 CACGAAGGTTATTTGTTGCTGAAAC 59.827 40.000 0.00 0.00 39.41 2.78
2792 4021 5.277825 CACGAAGGTTATTTGTTGCTGAAA 58.722 37.500 0.00 0.00 0.00 2.69
2793 4022 4.261405 CCACGAAGGTTATTTGTTGCTGAA 60.261 41.667 0.00 0.00 0.00 3.02
2794 4023 3.252215 CCACGAAGGTTATTTGTTGCTGA 59.748 43.478 0.00 0.00 0.00 4.26
2795 4024 3.252215 TCCACGAAGGTTATTTGTTGCTG 59.748 43.478 0.00 0.00 39.02 4.41
2796 4025 3.482436 TCCACGAAGGTTATTTGTTGCT 58.518 40.909 0.00 0.00 39.02 3.91
2797 4026 3.821841 CTCCACGAAGGTTATTTGTTGC 58.178 45.455 0.00 0.00 39.02 4.17
2798 4027 3.365969 GGCTCCACGAAGGTTATTTGTTG 60.366 47.826 0.00 0.00 39.02 3.33
2799 4028 2.817844 GGCTCCACGAAGGTTATTTGTT 59.182 45.455 0.00 0.00 39.02 2.83
2800 4029 2.433436 GGCTCCACGAAGGTTATTTGT 58.567 47.619 0.00 0.00 39.02 2.83
2801 4030 1.743394 GGGCTCCACGAAGGTTATTTG 59.257 52.381 0.00 0.00 39.02 2.32
2802 4031 1.633945 AGGGCTCCACGAAGGTTATTT 59.366 47.619 0.00 0.00 39.02 1.40
2803 4032 1.209747 GAGGGCTCCACGAAGGTTATT 59.790 52.381 0.00 0.00 39.02 1.40
2804 4033 0.831307 GAGGGCTCCACGAAGGTTAT 59.169 55.000 0.00 0.00 39.02 1.89
2805 4034 0.543410 TGAGGGCTCCACGAAGGTTA 60.543 55.000 0.00 0.00 39.02 2.85
2806 4035 1.841556 TGAGGGCTCCACGAAGGTT 60.842 57.895 0.00 0.00 39.02 3.50
2807 4036 2.203788 TGAGGGCTCCACGAAGGT 60.204 61.111 0.00 0.00 39.02 3.50
2808 4037 2.266055 GTGAGGGCTCCACGAAGG 59.734 66.667 0.00 0.00 39.47 3.46
2809 4038 2.111999 TTGGTGAGGGCTCCACGAAG 62.112 60.000 0.00 0.00 37.40 3.79
2810 4039 1.701031 TTTGGTGAGGGCTCCACGAA 61.701 55.000 0.00 0.00 37.40 3.85
2811 4040 1.701031 TTTTGGTGAGGGCTCCACGA 61.701 55.000 0.00 0.00 37.40 4.35
2812 4041 0.821711 TTTTTGGTGAGGGCTCCACG 60.822 55.000 0.00 0.00 37.40 4.94
2813 4042 3.125520 TTTTTGGTGAGGGCTCCAC 57.874 52.632 0.00 0.00 37.40 4.02
2829 4058 7.119553 ACATGTTTGAGCAGTGATTTTGTTTTT 59.880 29.630 0.00 0.00 0.00 1.94
2830 4059 6.594937 ACATGTTTGAGCAGTGATTTTGTTTT 59.405 30.769 0.00 0.00 0.00 2.43
2831 4060 6.108015 ACATGTTTGAGCAGTGATTTTGTTT 58.892 32.000 0.00 0.00 0.00 2.83
2832 4061 5.663456 ACATGTTTGAGCAGTGATTTTGTT 58.337 33.333 0.00 0.00 0.00 2.83
2833 4062 5.266733 ACATGTTTGAGCAGTGATTTTGT 57.733 34.783 0.00 0.00 0.00 2.83
2834 4063 6.207928 TGTACATGTTTGAGCAGTGATTTTG 58.792 36.000 2.30 0.00 0.00 2.44
2835 4064 6.389830 TGTACATGTTTGAGCAGTGATTTT 57.610 33.333 2.30 0.00 0.00 1.82
2836 4065 6.579666 ATGTACATGTTTGAGCAGTGATTT 57.420 33.333 7.78 0.00 0.00 2.17
2837 4066 7.686438 TTATGTACATGTTTGAGCAGTGATT 57.314 32.000 18.81 0.00 0.00 2.57
2838 4067 7.391554 AGTTTATGTACATGTTTGAGCAGTGAT 59.608 33.333 18.81 0.00 0.00 3.06
2839 4068 6.710295 AGTTTATGTACATGTTTGAGCAGTGA 59.290 34.615 18.81 0.00 0.00 3.41
2840 4069 6.902341 AGTTTATGTACATGTTTGAGCAGTG 58.098 36.000 18.81 0.00 0.00 3.66
2841 4070 7.510549 AAGTTTATGTACATGTTTGAGCAGT 57.489 32.000 18.81 0.00 0.00 4.40
2842 4071 8.075574 TCAAAGTTTATGTACATGTTTGAGCAG 58.924 33.333 18.81 1.57 30.89 4.24
2843 4072 7.935520 TCAAAGTTTATGTACATGTTTGAGCA 58.064 30.769 18.81 5.08 30.89 4.26
2844 4073 8.690840 GTTCAAAGTTTATGTACATGTTTGAGC 58.309 33.333 18.81 20.59 34.78 4.26
2845 4074 9.729023 TGTTCAAAGTTTATGTACATGTTTGAG 57.271 29.630 18.81 3.50 34.78 3.02
2883 4112 7.648142 ACATTCGAAGAGCACTCAAATAAAAA 58.352 30.769 3.35 0.00 38.43 1.94
2884 4113 7.202016 ACATTCGAAGAGCACTCAAATAAAA 57.798 32.000 3.35 0.00 38.43 1.52
2885 4114 6.801539 ACATTCGAAGAGCACTCAAATAAA 57.198 33.333 3.35 0.00 38.43 1.40
2886 4115 6.801539 AACATTCGAAGAGCACTCAAATAA 57.198 33.333 3.35 0.00 38.43 1.40
2887 4116 8.492673 AATAACATTCGAAGAGCACTCAAATA 57.507 30.769 3.35 0.00 38.43 1.40
2888 4117 6.992063 ATAACATTCGAAGAGCACTCAAAT 57.008 33.333 3.35 0.00 38.43 2.32
2889 4118 6.801539 AATAACATTCGAAGAGCACTCAAA 57.198 33.333 3.35 0.00 38.43 2.69
2890 4119 6.801539 AAATAACATTCGAAGAGCACTCAA 57.198 33.333 3.35 0.00 38.43 3.02
2891 4120 6.801539 AAAATAACATTCGAAGAGCACTCA 57.198 33.333 3.35 0.00 38.43 3.41
2892 4121 7.426743 GCTAAAAATAACATTCGAAGAGCACTC 59.573 37.037 3.35 0.00 38.43 3.51
2893 4122 7.119846 AGCTAAAAATAACATTCGAAGAGCACT 59.880 33.333 3.35 0.00 38.43 4.40
2894 4123 7.244192 AGCTAAAAATAACATTCGAAGAGCAC 58.756 34.615 3.35 0.00 38.43 4.40
2895 4124 7.377766 AGCTAAAAATAACATTCGAAGAGCA 57.622 32.000 3.35 0.00 38.43 4.26
2896 4125 9.769093 TTTAGCTAAAAATAACATTCGAAGAGC 57.231 29.630 16.53 0.03 38.43 4.09
2910 4139 8.915654 CGATCTTGCAAAGTTTTAGCTAAAAAT 58.084 29.630 28.54 25.54 46.34 1.82
2911 4140 7.918562 ACGATCTTGCAAAGTTTTAGCTAAAAA 59.081 29.630 28.54 12.79 46.34 1.94
2912 4141 7.422399 ACGATCTTGCAAAGTTTTAGCTAAAA 58.578 30.769 24.42 24.42 46.34 1.52
2913 4142 6.966021 ACGATCTTGCAAAGTTTTAGCTAAA 58.034 32.000 14.96 14.96 46.34 1.85
2914 4143 6.203915 TGACGATCTTGCAAAGTTTTAGCTAA 59.796 34.615 0.86 0.86 46.34 3.09
2915 4144 5.699001 TGACGATCTTGCAAAGTTTTAGCTA 59.301 36.000 0.00 0.00 46.34 3.32
2916 4145 4.515191 TGACGATCTTGCAAAGTTTTAGCT 59.485 37.500 0.00 0.00 46.34 3.32
2917 4146 4.783242 TGACGATCTTGCAAAGTTTTAGC 58.217 39.130 0.00 0.00 46.34 3.09
2918 4147 7.432252 ACTTTTGACGATCTTGCAAAGTTTTAG 59.568 33.333 0.00 0.00 46.34 1.85
2919 4148 7.254852 ACTTTTGACGATCTTGCAAAGTTTTA 58.745 30.769 0.00 0.00 46.34 1.52
2920 4149 6.099341 ACTTTTGACGATCTTGCAAAGTTTT 58.901 32.000 0.00 0.00 46.34 2.43
2921 4150 5.650543 ACTTTTGACGATCTTGCAAAGTTT 58.349 33.333 0.00 0.00 46.34 2.66
2922 4151 5.248870 ACTTTTGACGATCTTGCAAAGTT 57.751 34.783 0.00 0.00 46.34 2.66
2923 4152 4.900635 ACTTTTGACGATCTTGCAAAGT 57.099 36.364 0.00 0.00 46.34 2.66
2925 4154 5.645624 TGAAACTTTTGACGATCTTGCAAA 58.354 33.333 0.00 0.00 0.00 3.68
2926 4155 5.242069 TGAAACTTTTGACGATCTTGCAA 57.758 34.783 0.00 0.00 0.00 4.08
2927 4156 4.891627 TGAAACTTTTGACGATCTTGCA 57.108 36.364 0.00 0.00 0.00 4.08
2928 4157 5.451908 TCATGAAACTTTTGACGATCTTGC 58.548 37.500 0.00 0.00 0.00 4.01
2929 4158 7.080099 ACATCATGAAACTTTTGACGATCTTG 58.920 34.615 0.00 0.00 0.00 3.02
2930 4159 7.206981 ACATCATGAAACTTTTGACGATCTT 57.793 32.000 0.00 0.00 0.00 2.40
2931 4160 6.808008 ACATCATGAAACTTTTGACGATCT 57.192 33.333 0.00 0.00 0.00 2.75
2932 4161 6.247165 CGAACATCATGAAACTTTTGACGATC 59.753 38.462 0.00 0.00 0.00 3.69
2933 4162 6.073276 TCGAACATCATGAAACTTTTGACGAT 60.073 34.615 0.00 0.00 0.00 3.73
2934 4163 5.235401 TCGAACATCATGAAACTTTTGACGA 59.765 36.000 0.00 7.02 0.00 4.20
2935 4164 5.439828 TCGAACATCATGAAACTTTTGACG 58.560 37.500 0.00 4.90 0.00 4.35
2936 4165 6.857964 ACATCGAACATCATGAAACTTTTGAC 59.142 34.615 0.00 0.00 0.00 3.18
2937 4166 6.969366 ACATCGAACATCATGAAACTTTTGA 58.031 32.000 0.00 0.71 0.00 2.69
2938 4167 6.306356 GGACATCGAACATCATGAAACTTTTG 59.694 38.462 0.00 0.00 0.00 2.44
2939 4168 6.016360 TGGACATCGAACATCATGAAACTTTT 60.016 34.615 0.00 0.00 0.00 2.27
2940 4169 5.473162 TGGACATCGAACATCATGAAACTTT 59.527 36.000 0.00 0.00 0.00 2.66
2941 4170 5.003160 TGGACATCGAACATCATGAAACTT 58.997 37.500 0.00 0.00 0.00 2.66
2942 4171 4.578871 TGGACATCGAACATCATGAAACT 58.421 39.130 0.00 0.00 0.00 2.66
2943 4172 4.944962 TGGACATCGAACATCATGAAAC 57.055 40.909 0.00 0.00 0.00 2.78
2944 4173 5.473162 ACTTTGGACATCGAACATCATGAAA 59.527 36.000 0.00 0.00 0.00 2.69
2945 4174 5.003160 ACTTTGGACATCGAACATCATGAA 58.997 37.500 0.00 0.00 0.00 2.57
2946 4175 4.578871 ACTTTGGACATCGAACATCATGA 58.421 39.130 0.00 0.00 0.00 3.07
2947 4176 4.952262 ACTTTGGACATCGAACATCATG 57.048 40.909 0.00 0.00 0.00 3.07
2948 4177 5.473162 TGAAACTTTGGACATCGAACATCAT 59.527 36.000 0.00 0.00 0.00 2.45
2949 4178 4.819088 TGAAACTTTGGACATCGAACATCA 59.181 37.500 0.00 0.00 0.00 3.07
2950 4179 5.179368 TCTGAAACTTTGGACATCGAACATC 59.821 40.000 0.00 0.00 0.00 3.06
2951 4180 5.063204 TCTGAAACTTTGGACATCGAACAT 58.937 37.500 0.00 0.00 0.00 2.71
2952 4181 4.447290 TCTGAAACTTTGGACATCGAACA 58.553 39.130 0.00 0.00 0.00 3.18
2953 4182 5.613358 ATCTGAAACTTTGGACATCGAAC 57.387 39.130 0.00 0.00 0.00 3.95
2954 4183 6.633500 AAATCTGAAACTTTGGACATCGAA 57.367 33.333 0.00 0.00 0.00 3.71
2955 4184 6.633500 AAAATCTGAAACTTTGGACATCGA 57.367 33.333 0.00 0.00 0.00 3.59
2988 4217 8.792633 CCCTCTATGAACAGTAAATTCAAAACA 58.207 33.333 0.00 0.00 39.43 2.83
2989 4218 8.793592 ACCCTCTATGAACAGTAAATTCAAAAC 58.206 33.333 0.00 0.00 39.43 2.43
2990 4219 8.792633 CACCCTCTATGAACAGTAAATTCAAAA 58.207 33.333 0.00 0.00 39.43 2.44
2991 4220 7.942341 ACACCCTCTATGAACAGTAAATTCAAA 59.058 33.333 0.00 0.00 39.43 2.69
2992 4221 7.458397 ACACCCTCTATGAACAGTAAATTCAA 58.542 34.615 0.00 0.00 39.43 2.69
2993 4222 7.016153 ACACCCTCTATGAACAGTAAATTCA 57.984 36.000 0.00 0.00 40.25 2.57
2994 4223 7.711339 CCTACACCCTCTATGAACAGTAAATTC 59.289 40.741 0.00 0.00 0.00 2.17
2995 4224 7.365652 CCCTACACCCTCTATGAACAGTAAATT 60.366 40.741 0.00 0.00 0.00 1.82
2996 4225 6.099845 CCCTACACCCTCTATGAACAGTAAAT 59.900 42.308 0.00 0.00 0.00 1.40
2997 4226 5.424252 CCCTACACCCTCTATGAACAGTAAA 59.576 44.000 0.00 0.00 0.00 2.01
2998 4227 4.960469 CCCTACACCCTCTATGAACAGTAA 59.040 45.833 0.00 0.00 0.00 2.24
2999 4228 4.543689 CCCTACACCCTCTATGAACAGTA 58.456 47.826 0.00 0.00 0.00 2.74
3000 4229 3.375699 CCCTACACCCTCTATGAACAGT 58.624 50.000 0.00 0.00 0.00 3.55
3001 4230 2.700897 CCCCTACACCCTCTATGAACAG 59.299 54.545 0.00 0.00 0.00 3.16
3002 4231 2.759355 CCCCTACACCCTCTATGAACA 58.241 52.381 0.00 0.00 0.00 3.18
3003 4232 1.416772 GCCCCTACACCCTCTATGAAC 59.583 57.143 0.00 0.00 0.00 3.18
3004 4233 1.009060 TGCCCCTACACCCTCTATGAA 59.991 52.381 0.00 0.00 0.00 2.57
3005 4234 0.639943 TGCCCCTACACCCTCTATGA 59.360 55.000 0.00 0.00 0.00 2.15
3006 4235 0.759346 GTGCCCCTACACCCTCTATG 59.241 60.000 0.00 0.00 34.35 2.23
3007 4236 3.242355 GTGCCCCTACACCCTCTAT 57.758 57.895 0.00 0.00 34.35 1.98
3008 4237 4.800764 GTGCCCCTACACCCTCTA 57.199 61.111 0.00 0.00 34.35 2.43
3014 4243 2.933834 ACCCAGGTGCCCCTACAC 60.934 66.667 0.00 0.00 39.89 2.90
3015 4244 2.933287 CACCCAGGTGCCCCTACA 60.933 66.667 3.41 0.00 39.89 2.74
3024 4253 2.173519 CATGATTTTCAGCACCCAGGT 58.826 47.619 0.00 0.00 0.00 4.00
3025 4254 2.165030 GACATGATTTTCAGCACCCAGG 59.835 50.000 0.00 0.00 0.00 4.45
3026 4255 3.087031 AGACATGATTTTCAGCACCCAG 58.913 45.455 0.00 0.00 0.00 4.45
3027 4256 3.084039 GAGACATGATTTTCAGCACCCA 58.916 45.455 0.00 0.00 0.00 4.51
3028 4257 3.350833 AGAGACATGATTTTCAGCACCC 58.649 45.455 0.00 0.00 0.00 4.61
3029 4258 5.181748 ACTAGAGACATGATTTTCAGCACC 58.818 41.667 0.00 0.00 0.00 5.01
3030 4259 6.734104 AACTAGAGACATGATTTTCAGCAC 57.266 37.500 0.00 0.00 0.00 4.40
3031 4260 7.750229 AAAACTAGAGACATGATTTTCAGCA 57.250 32.000 0.00 0.00 0.00 4.41
3040 4269 9.052759 GGAAACACTTAAAAACTAGAGACATGA 57.947 33.333 0.00 0.00 0.00 3.07
3041 4270 8.009974 CGGAAACACTTAAAAACTAGAGACATG 58.990 37.037 0.00 0.00 0.00 3.21
3042 4271 7.929785 TCGGAAACACTTAAAAACTAGAGACAT 59.070 33.333 0.00 0.00 0.00 3.06
3043 4272 7.267128 TCGGAAACACTTAAAAACTAGAGACA 58.733 34.615 0.00 0.00 0.00 3.41
3044 4273 7.704789 TCGGAAACACTTAAAAACTAGAGAC 57.295 36.000 0.00 0.00 0.00 3.36
3045 4274 9.635520 CTATCGGAAACACTTAAAAACTAGAGA 57.364 33.333 0.00 0.00 0.00 3.10
3046 4275 8.870879 CCTATCGGAAACACTTAAAAACTAGAG 58.129 37.037 0.00 0.00 0.00 2.43
3047 4276 8.587608 TCCTATCGGAAACACTTAAAAACTAGA 58.412 33.333 0.00 0.00 36.03 2.43
3048 4277 8.767478 TCCTATCGGAAACACTTAAAAACTAG 57.233 34.615 0.00 0.00 36.03 2.57
3066 4295 7.878127 ACAATATTCTACACCCATTTCCTATCG 59.122 37.037 0.00 0.00 0.00 2.92
3227 4456 9.807921 ACTTCCATTCTTATTTCCTTGTTTAGA 57.192 29.630 0.00 0.00 0.00 2.10
3280 4509 3.591527 TGGGTAGATGATTGGGAGTTTGT 59.408 43.478 0.00 0.00 0.00 2.83
3363 4608 3.982058 GGTATAGATGTGCGAGCAGTAAC 59.018 47.826 0.00 0.00 0.00 2.50
3393 4638 0.037882 CTCGCTCTGAAGGTCTTGCA 60.038 55.000 0.00 0.00 0.00 4.08
3461 4706 7.400439 AGGCTATGATAGTATGCAATGACAAT 58.600 34.615 0.92 0.00 0.00 2.71
3548 4795 6.266786 TGGTAAGCAATATTAGATCCTCACGA 59.733 38.462 0.00 0.00 0.00 4.35
3566 4813 6.223120 ACACAAATGATTTTTCCTGGTAAGC 58.777 36.000 0.00 0.00 0.00 3.09
3614 4861 5.505173 AAGGCTAAAACATGATGAATCCG 57.495 39.130 0.00 0.00 0.00 4.18
3658 4905 4.901868 ACGTGGCTACTATTCCAAAAAGA 58.098 39.130 0.00 0.00 33.57 2.52
3665 4912 7.654520 TGTAATGAAATACGTGGCTACTATTCC 59.345 37.037 0.00 0.00 0.00 3.01
3681 4928 7.068839 TGTGTAACCCTTGTTGTGTAATGAAAT 59.931 33.333 0.00 0.00 35.87 2.17
3690 4937 3.191581 TGTTGTGTGTAACCCTTGTTGTG 59.808 43.478 0.00 0.00 35.87 3.33
3708 4955 2.930040 GGGACAGTGATCGTGTATGTTG 59.070 50.000 0.00 0.00 0.00 3.33
3713 4960 1.940883 GCCGGGACAGTGATCGTGTA 61.941 60.000 2.18 0.00 0.00 2.90
3725 4972 0.808755 CTGTTTGGTATTGCCGGGAC 59.191 55.000 2.18 0.00 41.21 4.46
3733 4980 4.202567 ACATGTCTCCCACTGTTTGGTATT 60.203 41.667 0.00 0.00 45.25 1.89
3777 5025 5.630661 TCTTCTACTTCGAGAGTCCTTTG 57.369 43.478 3.94 0.00 39.86 2.77
3807 5055 5.602628 ACAAGGTTCTACAAGAGTGAACTC 58.397 41.667 2.06 2.06 43.17 3.01
3820 5068 5.544650 GGTTTAGCAGTGTACAAGGTTCTA 58.455 41.667 0.00 0.00 0.00 2.10
3838 5086 1.142060 CCTATGGTGGATGGCGGTTTA 59.858 52.381 0.00 0.00 0.00 2.01
3872 5120 1.216977 CTTATCGGGTCGTGCCACA 59.783 57.895 0.00 0.00 39.65 4.17
3884 5132 3.512680 GCGATGATTCCCCTACTTATCG 58.487 50.000 0.00 0.00 38.98 2.92
3903 5151 4.804108 CTCCTATAGATCTTCTTGTGGCG 58.196 47.826 0.00 0.00 0.00 5.69
3911 5159 6.587273 ACAAAAGGTGCTCCTATAGATCTTC 58.413 40.000 7.96 0.00 44.35 2.87
3922 5170 3.366374 GCATTCACTACAAAAGGTGCTCC 60.366 47.826 0.00 0.00 33.91 4.70
3965 5213 2.420568 CCATCATGTGCAGTGGGCC 61.421 63.158 0.00 0.00 43.89 5.80
3981 5229 0.887933 GCCAAAAATTCTCGGCTCCA 59.112 50.000 5.04 0.00 41.50 3.86
4156 5404 4.868734 CGTCCAATTTGGTAGTCCTCTAAC 59.131 45.833 14.98 1.52 39.03 2.34
4243 5491 3.498661 GGACCCCTGACTTGAACTTTGAT 60.499 47.826 0.00 0.00 0.00 2.57
4276 5524 0.840722 GTCCACCTCCCCCAAGAAGA 60.841 60.000 0.00 0.00 0.00 2.87
4277 5525 1.133809 TGTCCACCTCCCCCAAGAAG 61.134 60.000 0.00 0.00 0.00 2.85
4278 5526 0.699577 TTGTCCACCTCCCCCAAGAA 60.700 55.000 0.00 0.00 0.00 2.52
4280 5528 1.380302 CTTGTCCACCTCCCCCAAG 59.620 63.158 0.00 0.00 0.00 3.61
4281 5529 2.160171 CCTTGTCCACCTCCCCCAA 61.160 63.158 0.00 0.00 0.00 4.12
4282 5530 2.531685 CCTTGTCCACCTCCCCCA 60.532 66.667 0.00 0.00 0.00 4.96
4286 5534 4.048470 GCCCCCTTGTCCACCTCC 62.048 72.222 0.00 0.00 0.00 4.30
4298 5546 2.194868 CGGGTATTCTTGGCCCCC 59.805 66.667 0.00 0.00 39.22 5.40
4357 5605 0.179034 GCTGCCTCCTACAAGGATGG 60.179 60.000 0.00 2.20 44.81 3.51
4380 5628 5.472301 AAACTTGTAGATCCCCCATGATT 57.528 39.130 0.00 0.00 0.00 2.57
4395 5643 9.814899 TCATTCATGAAAACAACATAAACTTGT 57.185 25.926 13.09 0.00 33.08 3.16
4413 5661 5.428496 ACTTGTCACACACTTCATTCATG 57.572 39.130 0.00 0.00 0.00 3.07
4468 5716 3.155093 GCAACTTGCATCGAATTCCAT 57.845 42.857 8.97 0.00 44.26 3.41
4490 5738 1.632589 ACCAACCTTCAAATCCAGGC 58.367 50.000 0.00 0.00 32.79 4.85
4551 5800 3.172339 TGCCAATCCAACCTTAGCAATT 58.828 40.909 0.00 0.00 0.00 2.32
4598 5847 8.565896 AATTACTGACATCAAGCTTCAACATA 57.434 30.769 0.00 0.00 0.00 2.29
4719 5968 8.986477 AAATAGGTAAATGAACAAGCAACATC 57.014 30.769 0.00 0.00 0.00 3.06
4779 6028 7.490962 TTATGTTTTCTATAATGGGTGCTCG 57.509 36.000 0.00 0.00 0.00 5.03
4966 6217 9.933723 CATTCTTGGTATTCTTGGAAAAGAATT 57.066 29.630 16.45 4.47 44.63 2.17
4968 6219 7.525360 GCCATTCTTGGTATTCTTGGAAAAGAA 60.525 37.037 3.56 3.56 45.57 2.52
4970 6221 6.101997 GCCATTCTTGGTATTCTTGGAAAAG 58.898 40.000 0.00 0.00 45.57 2.27
5086 6338 8.729756 TCCACACATATGAACAGTAAAATCAAG 58.270 33.333 10.38 0.00 0.00 3.02
5098 6352 5.066505 GGAAGATGGTTCCACACATATGAAC 59.933 44.000 10.38 2.68 38.45 3.18
5158 6412 7.391148 TGAAGATGTACTTTTATTTCTGGGC 57.609 36.000 0.00 0.00 39.13 5.36
5202 6456 4.018490 TCACAGAGCCAATGTAAATGCAT 58.982 39.130 0.00 0.00 0.00 3.96
5254 6508 9.369904 GATAAAACAAGTGGCATCAATTTATGT 57.630 29.630 10.74 0.00 0.00 2.29
5320 6574 8.699749 GCAATAATGGAACTAAACTTGTGAAAC 58.300 33.333 0.00 0.00 37.35 2.78
5466 6720 0.031178 GCGGGCAATCCAATGCTAAG 59.969 55.000 0.00 0.00 45.68 2.18
5504 6758 2.688477 AGAACTTTTGGGGGCATTTGA 58.312 42.857 0.00 0.00 0.00 2.69
5548 6802 8.944138 TGGGATACATTGATTCCAACTTATAGA 58.056 33.333 10.39 0.00 30.92 1.98
5624 6878 5.843673 TCTCAAAGCAACCATGTTTAACA 57.156 34.783 0.00 0.00 29.02 2.41
5636 6890 3.941483 GGCTGCTATACTTCTCAAAGCAA 59.059 43.478 0.00 0.00 42.21 3.91
5696 6952 5.105392 TGGTCACCATTTTGAATTATCAGGC 60.105 40.000 0.00 0.00 36.78 4.85
5717 6973 2.165167 CCAAGTGCAGATGAACATGGT 58.835 47.619 7.00 0.00 37.60 3.55
5810 7130 9.736023 GAAACTTTGAAAAAGAAGCTATTCAGA 57.264 29.630 6.73 0.00 37.94 3.27
5812 7132 9.736023 GAGAAACTTTGAAAAAGAAGCTATTCA 57.264 29.630 6.73 0.00 37.94 2.57
5819 7139 7.062255 GGTGTGTGAGAAACTTTGAAAAAGAAG 59.938 37.037 6.73 0.00 0.00 2.85
5849 7170 0.605319 TGAGGGCTCGTGCGATTTTT 60.605 50.000 3.02 0.00 40.82 1.94
5850 7171 1.003839 TGAGGGCTCGTGCGATTTT 60.004 52.632 3.02 0.00 40.82 1.82
5851 7172 1.448540 CTGAGGGCTCGTGCGATTT 60.449 57.895 3.02 0.00 40.82 2.17
5852 7173 1.680522 ATCTGAGGGCTCGTGCGATT 61.681 55.000 3.02 0.00 40.82 3.34
5853 7174 2.130426 ATCTGAGGGCTCGTGCGAT 61.130 57.895 3.02 0.00 40.82 4.58
5890 7211 0.109597 GTGGAAGGCTCGTGCAAATG 60.110 55.000 12.07 0.00 41.91 2.32
5969 7291 7.823745 ATTCCTGAGTGTGAACAGTAAATTT 57.176 32.000 0.00 0.00 32.93 1.82
5988 7310 3.682718 CGCACCCAGACTCAATTATTCCT 60.683 47.826 0.00 0.00 0.00 3.36
5992 7314 3.627395 TTCGCACCCAGACTCAATTAT 57.373 42.857 0.00 0.00 0.00 1.28
6010 7332 6.166982 AGGTAATTATGAGAGCGGCTATTTC 58.833 40.000 0.60 1.94 0.00 2.17
6061 7383 0.308068 CGCCACGAGACGATAGATGT 59.692 55.000 0.00 0.00 41.38 3.06
6117 7439 6.892658 ATGCAATGACTGTAACAAGGTAAA 57.107 33.333 0.00 0.00 0.00 2.01
6143 7465 7.651808 ACACCAAAACTAAATCAAGATGTCAG 58.348 34.615 0.00 0.00 0.00 3.51
6146 7468 7.433680 GGAACACCAAAACTAAATCAAGATGT 58.566 34.615 0.00 0.00 0.00 3.06
6160 7482 2.688958 CACTTTACGGGGAACACCAAAA 59.311 45.455 0.00 0.00 42.91 2.44
6175 7497 8.238631 GCACGGAGGTAAATAATTTTCACTTTA 58.761 33.333 0.00 0.00 0.00 1.85
6179 7501 6.190954 AGCACGGAGGTAAATAATTTTCAC 57.809 37.500 0.00 0.00 0.00 3.18
6196 7518 3.770263 ATGACATTGATGAAAGCACGG 57.230 42.857 0.00 0.00 0.00 4.94
6252 7574 1.621317 TCGAGTAGCAACATCAACCCA 59.379 47.619 0.00 0.00 0.00 4.51
6267 7589 2.103263 AGCTTTTGAGGACTTGTCGAGT 59.897 45.455 0.00 0.00 42.70 4.18
6421 7743 5.071519 AGCTACATTATCAGGCAAGATCAGT 59.928 40.000 0.00 0.00 0.00 3.41
6431 7753 8.450578 TTCCATTTGTAAGCTACATTATCAGG 57.549 34.615 0.00 0.00 38.68 3.86
6603 7926 8.101654 TCTTAACAAACACCATGTACATTACC 57.898 34.615 5.37 0.00 0.00 2.85
6643 7966 1.151450 CCCATATGGTGAGGTGCCC 59.849 63.158 20.46 0.00 0.00 5.36
6668 7991 8.465999 CCACACATTGCTAACTTGGAAATTATA 58.534 33.333 0.00 0.00 0.00 0.98
6672 7995 4.832266 TCCACACATTGCTAACTTGGAAAT 59.168 37.500 0.00 0.00 0.00 2.17
6712 8035 6.436261 GTCCAGTTAACTGCCTAAAAGAAAC 58.564 40.000 27.05 9.53 42.47 2.78
6726 8050 0.542805 TATGGGGCGGTCCAGTTAAC 59.457 55.000 0.00 0.00 40.56 2.01
6738 8062 5.039920 TGTATGATATGCATCTATGGGGC 57.960 43.478 0.19 0.00 38.44 5.80
6898 8222 9.247861 AGGAAATATGAAAGCTTCTGTTTACAT 57.752 29.630 0.00 0.75 0.00 2.29
6899 8223 8.635765 AGGAAATATGAAAGCTTCTGTTTACA 57.364 30.769 0.00 0.00 0.00 2.41
6900 8224 9.914131 AAAGGAAATATGAAAGCTTCTGTTTAC 57.086 29.630 0.00 0.00 0.00 2.01
6945 8281 7.994911 AGTGAATGTAGATATGAAAAGCATCCA 59.005 33.333 0.00 0.00 38.44 3.41
6952 8288 8.717717 AGGATGGAGTGAATGTAGATATGAAAA 58.282 33.333 0.00 0.00 0.00 2.29
7021 8357 6.600882 ATGGAACTAAACGAGGAACTTCTA 57.399 37.500 0.00 0.00 41.55 2.10
7047 8383 3.127791 AGATGAGTGAGGAGGGATGTT 57.872 47.619 0.00 0.00 0.00 2.71
7051 8387 2.191400 CCAAAGATGAGTGAGGAGGGA 58.809 52.381 0.00 0.00 0.00 4.20
7060 8396 6.627953 CGGGAAAATATTTGCCAAAGATGAGT 60.628 38.462 24.14 0.00 37.63 3.41
7077 8413 0.539986 TTAGAGGAGCGCGGGAAAAT 59.460 50.000 8.83 0.00 0.00 1.82
7137 8473 8.801882 TCGTATTCTCCATCTTTTTGGTTAAT 57.198 30.769 0.00 0.00 38.01 1.40
7214 8553 1.343580 TGGGAGGACCATCGGATGTTA 60.344 52.381 16.29 0.00 46.80 2.41
7225 8564 1.916181 TCTGGAGAATTTGGGAGGACC 59.084 52.381 0.00 0.00 40.81 4.46
7260 8599 2.296190 TCGAGTTCATATGCGCTGGTAT 59.704 45.455 9.73 1.61 0.00 2.73
7300 8639 4.205587 AGATGAGAATGTTCTTCATGCCC 58.794 43.478 10.37 1.48 37.73 5.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.