Multiple sequence alignment - TraesCS1A01G146700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G146700 chr1A 100.000 5038 0 0 1 5038 253018193 253013156 0.000000e+00 9304
1 TraesCS1A01G146700 chr1A 84.399 391 48 7 4398 4777 249683400 249683012 6.160000e-99 372
2 TraesCS1A01G146700 chr1A 89.716 282 26 3 4118 4397 557124719 557124999 1.720000e-94 357
3 TraesCS1A01G146700 chr1D 92.704 2001 125 4 1859 3840 200091971 200089973 0.000000e+00 2867
4 TraesCS1A01G146700 chr1D 89.541 1023 101 6 1 1022 477196953 477197970 0.000000e+00 1291
5 TraesCS1A01G146700 chr1D 93.614 642 38 3 1054 1694 200092606 200091967 0.000000e+00 955
6 TraesCS1A01G146700 chr1D 84.881 377 45 8 4397 4765 2514340 2514712 2.220000e-98 370
7 TraesCS1A01G146700 chr1D 80.602 299 26 9 3844 4116 200088333 200088041 8.550000e-48 202
8 TraesCS1A01G146700 chr1B 90.028 1765 144 11 2370 4106 288050426 288052186 0.000000e+00 2255
9 TraesCS1A01G146700 chr1B 93.136 641 43 1 1054 1694 288022928 288023567 0.000000e+00 939
10 TraesCS1A01G146700 chr1B 85.530 387 43 4 4397 4771 523152233 523151848 4.730000e-105 392
11 TraesCS1A01G146700 chr1B 83.938 386 48 4 4397 4771 43650051 43650433 1.720000e-94 357
12 TraesCS1A01G146700 chr1B 93.802 242 8 1 2085 2326 288039492 288039726 1.720000e-94 357
13 TraesCS1A01G146700 chr1B 86.522 230 11 8 1871 2099 288023934 288024144 8.430000e-58 235
14 TraesCS1A01G146700 chr1B 87.255 204 20 5 1677 1874 288023583 288023786 1.410000e-55 228
15 TraesCS1A01G146700 chr7B 89.581 1027 100 6 1 1023 645267932 645266909 0.000000e+00 1297
16 TraesCS1A01G146700 chr7B 89.716 282 26 3 4118 4397 634288580 634288300 1.720000e-94 357
17 TraesCS1A01G146700 chr6B 88.585 1025 110 7 1 1023 454757924 454756905 0.000000e+00 1238
18 TraesCS1A01G146700 chr6B 84.981 799 112 7 1 796 429154973 429154180 0.000000e+00 804
19 TraesCS1A01G146700 chr6B 84.442 797 116 7 1 794 209889377 209888586 0.000000e+00 778
20 TraesCS1A01G146700 chr6B 86.765 272 26 10 4133 4397 512824948 512825216 1.370000e-75 294
21 TraesCS1A01G146700 chr2B 87.793 1024 121 4 1 1023 87761066 87760046 0.000000e+00 1195
22 TraesCS1A01G146700 chr2B 83.972 287 34 10 4118 4397 65864124 65864405 1.080000e-66 265
23 TraesCS1A01G146700 chr7A 85.519 1022 123 11 1 1021 485520793 485521790 0.000000e+00 1044
24 TraesCS1A01G146700 chr2A 87.356 870 107 3 1 870 113382252 113383118 0.000000e+00 994
25 TraesCS1A01G146700 chr2A 87.013 385 36 6 4397 4769 732990531 732990149 6.030000e-114 422
26 TraesCS1A01G146700 chr7D 88.644 590 60 6 437 1023 465919558 465920143 0.000000e+00 712
27 TraesCS1A01G146700 chr7D 86.614 381 38 3 4397 4766 602845597 602845219 4.690000e-110 409
28 TraesCS1A01G146700 chr7D 89.493 276 27 2 4112 4385 569206356 569206631 1.040000e-91 348
29 TraesCS1A01G146700 chr4A 88.655 476 54 0 1 476 365586400 365585925 9.400000e-162 580
30 TraesCS1A01G146700 chr4A 85.897 390 41 5 4393 4770 36608773 36608386 2.180000e-108 403
31 TraesCS1A01G146700 chr2D 86.911 382 39 3 4397 4767 42736476 42736857 7.800000e-113 418
32 TraesCS1A01G146700 chr2D 89.726 292 23 6 4109 4397 585207589 585207876 2.870000e-97 366
33 TraesCS1A01G146700 chr2D 83.721 387 50 4 4397 4771 585208096 585208481 2.230000e-93 353
34 TraesCS1A01G146700 chr2D 88.356 292 32 2 4108 4397 623912164 623912455 2.890000e-92 350
35 TraesCS1A01G146700 chr2D 85.069 288 38 5 4133 4418 644552808 644552524 6.380000e-74 289
36 TraesCS1A01G146700 chr5D 86.842 380 38 4 4397 4765 28320055 28320433 1.010000e-111 414
37 TraesCS1A01G146700 chr5D 86.005 393 39 8 4393 4771 534087584 534087974 1.690000e-109 407
38 TraesCS1A01G146700 chr5D 90.441 272 24 2 4115 4385 28319574 28319844 1.720000e-94 357
39 TraesCS1A01G146700 chr4D 86.684 383 40 2 4397 4768 96525302 96525684 1.010000e-111 414
40 TraesCS1A01G146700 chr6D 86.234 385 39 5 4397 4769 30534057 30533675 6.070000e-109 405
41 TraesCS1A01G146700 chr6D 91.166 283 24 1 4116 4397 164119550 164119268 2.850000e-102 383
42 TraesCS1A01G146700 chr3B 85.825 388 41 6 4397 4771 780835841 780836227 2.830000e-107 399
43 TraesCS1A01G146700 chr3B 85.714 287 39 2 4133 4418 388053097 388052812 8.200000e-78 302
44 TraesCS1A01G146700 chrUn 85.390 397 41 8 4393 4776 15764952 15765344 3.660000e-106 396
45 TraesCS1A01G146700 chr3A 85.233 386 46 5 4393 4767 691817242 691817627 2.200000e-103 387
46 TraesCS1A01G146700 chr3A 89.362 282 27 3 4118 4397 46829393 46829113 8.020000e-93 351
47 TraesCS1A01G146700 chr5A 89.680 281 28 1 4118 4397 685990909 685991189 1.720000e-94 357
48 TraesCS1A01G146700 chr5B 86.195 297 37 4 4124 4418 588908560 588908266 8.140000e-83 318
49 TraesCS1A01G146700 chr5B 86.667 165 20 2 4254 4418 644942379 644942541 1.110000e-41 182
50 TraesCS1A01G146700 chr3D 84.711 242 28 7 4397 4637 30764353 30764586 3.030000e-57 233


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G146700 chr1A 253013156 253018193 5037 True 9304.000000 9304 100.000000 1 5038 1 chr1A.!!$R2 5037
1 TraesCS1A01G146700 chr1D 200088041 200092606 4565 True 1341.333333 2867 88.973333 1054 4116 3 chr1D.!!$R1 3062
2 TraesCS1A01G146700 chr1D 477196953 477197970 1017 False 1291.000000 1291 89.541000 1 1022 1 chr1D.!!$F2 1021
3 TraesCS1A01G146700 chr1B 288050426 288052186 1760 False 2255.000000 2255 90.028000 2370 4106 1 chr1B.!!$F3 1736
4 TraesCS1A01G146700 chr1B 288022928 288024144 1216 False 467.333333 939 88.971000 1054 2099 3 chr1B.!!$F4 1045
5 TraesCS1A01G146700 chr7B 645266909 645267932 1023 True 1297.000000 1297 89.581000 1 1023 1 chr7B.!!$R2 1022
6 TraesCS1A01G146700 chr6B 454756905 454757924 1019 True 1238.000000 1238 88.585000 1 1023 1 chr6B.!!$R3 1022
7 TraesCS1A01G146700 chr6B 429154180 429154973 793 True 804.000000 804 84.981000 1 796 1 chr6B.!!$R2 795
8 TraesCS1A01G146700 chr6B 209888586 209889377 791 True 778.000000 778 84.442000 1 794 1 chr6B.!!$R1 793
9 TraesCS1A01G146700 chr2B 87760046 87761066 1020 True 1195.000000 1195 87.793000 1 1023 1 chr2B.!!$R1 1022
10 TraesCS1A01G146700 chr7A 485520793 485521790 997 False 1044.000000 1044 85.519000 1 1021 1 chr7A.!!$F1 1020
11 TraesCS1A01G146700 chr2A 113382252 113383118 866 False 994.000000 994 87.356000 1 870 1 chr2A.!!$F1 869
12 TraesCS1A01G146700 chr7D 465919558 465920143 585 False 712.000000 712 88.644000 437 1023 1 chr7D.!!$F1 586
13 TraesCS1A01G146700 chr2D 585207589 585208481 892 False 359.500000 366 86.723500 4109 4771 2 chr2D.!!$F3 662
14 TraesCS1A01G146700 chr5D 28319574 28320433 859 False 385.500000 414 88.641500 4115 4765 2 chr5D.!!$F2 650

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
288 289 0.250166 AAACGTAGACAGGGCCACAC 60.250 55.000 6.18 0.0 0.00 3.82 F
1172 1182 0.463295 CGATGCTTGTGATGGAGCCT 60.463 55.000 0.00 0.0 38.11 4.58 F
2472 2674 1.303643 GGGGCTTCTGGTGTTGAGG 60.304 63.158 0.00 0.0 0.00 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2158 2360 0.510359 CGCGCATAGCTCCTGAAATC 59.490 55.0 8.75 0.0 45.59 2.17 R
2496 2698 0.457853 GTCACGCTCCGCTGAATGTA 60.458 55.0 0.00 0.0 0.00 2.29 R
4358 6241 0.307760 CCGGATGGCAACTAAATCGC 59.692 55.0 0.00 0.0 37.61 4.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 1.759445 CTCCCAGTCCAACTCATCGAT 59.241 52.381 0.00 0.00 0.00 3.59
94 95 0.677731 TGAAGCCAGATTGAAGCCGG 60.678 55.000 0.00 0.00 0.00 6.13
113 114 0.530744 GACCGGAAAAATTGGGAGCC 59.469 55.000 9.46 0.00 0.00 4.70
140 141 1.632589 GGACCCAAAAAGATGGCAGT 58.367 50.000 0.00 0.00 39.26 4.40
154 155 3.448093 TGGCAGTATTCCAAACATCCA 57.552 42.857 0.00 0.00 0.00 3.41
170 171 9.001542 CCAAACATCCAAAAATATTGTTCACAT 57.998 29.630 0.00 0.00 30.62 3.21
288 289 0.250166 AAACGTAGACAGGGCCACAC 60.250 55.000 6.18 0.00 0.00 3.82
324 325 3.181451 GGAATCATACTGACCAGATGCCA 60.181 47.826 3.76 0.00 36.40 4.92
532 535 1.300963 CCTGTATGGCAGCCACTGT 59.699 57.895 19.10 3.18 43.71 3.55
647 650 2.797278 ATCGATGGGTGGCCTCGAC 61.797 63.158 15.37 0.00 43.40 4.20
680 683 1.333636 CGGGTGAGGAAGGCAGAGAT 61.334 60.000 0.00 0.00 0.00 2.75
752 755 2.985282 CGCCAGGGCAGAGCAAAA 60.985 61.111 11.42 0.00 42.06 2.44
775 778 1.053424 GGTGGTGGTTGGTGTCTCTA 58.947 55.000 0.00 0.00 0.00 2.43
799 802 4.762289 ACCAGATGATAGGTTCAAGGTC 57.238 45.455 0.00 0.00 38.03 3.85
819 824 3.700038 GTCGGGGGATCGATCTATTATGT 59.300 47.826 23.96 0.00 41.40 2.29
875 881 1.134699 AGCGATGCTCGAATGAGGAAA 60.135 47.619 9.32 0.00 46.28 3.13
880 886 4.656041 GATGCTCGAATGAGGAAAAACAG 58.344 43.478 0.00 0.00 46.28 3.16
919 928 2.235650 GGAAAGGAAAGTAGGTAGCCGT 59.764 50.000 0.00 0.00 0.00 5.68
925 934 1.252904 AAGTAGGTAGCCGTCGCCAA 61.253 55.000 0.00 0.00 34.57 4.52
983 993 2.418884 GCTCCAGGGTTAAGTAGAGTGC 60.419 54.545 0.00 0.00 0.00 4.40
984 994 3.100671 CTCCAGGGTTAAGTAGAGTGCT 58.899 50.000 0.00 0.00 0.00 4.40
1023 1033 4.419921 GGCCCGTGTACCTTGGGG 62.420 72.222 14.09 9.13 43.52 4.96
1025 1035 4.419921 CCCGTGTACCTTGGGGCC 62.420 72.222 0.00 0.00 39.39 5.80
1026 1036 4.770874 CCGTGTACCTTGGGGCCG 62.771 72.222 0.00 0.00 35.63 6.13
1044 1054 4.760047 CGCCTCCTCCCGGTGTTG 62.760 72.222 0.00 0.00 0.00 3.33
1046 1056 3.322466 CCTCCTCCCGGTGTTGCT 61.322 66.667 0.00 0.00 0.00 3.91
1047 1057 2.750350 CTCCTCCCGGTGTTGCTT 59.250 61.111 0.00 0.00 0.00 3.91
1048 1058 1.672356 CTCCTCCCGGTGTTGCTTG 60.672 63.158 0.00 0.00 0.00 4.01
1049 1059 3.365265 CCTCCCGGTGTTGCTTGC 61.365 66.667 0.00 0.00 0.00 4.01
1050 1060 2.281761 CTCCCGGTGTTGCTTGCT 60.282 61.111 0.00 0.00 0.00 3.91
1051 1061 2.594303 TCCCGGTGTTGCTTGCTG 60.594 61.111 0.00 0.00 0.00 4.41
1052 1062 3.673484 CCCGGTGTTGCTTGCTGG 61.673 66.667 0.00 0.00 0.00 4.85
1053 1063 4.347453 CCGGTGTTGCTTGCTGGC 62.347 66.667 0.00 0.00 0.00 4.85
1054 1064 3.594775 CGGTGTTGCTTGCTGGCA 61.595 61.111 0.33 0.33 40.74 4.92
1055 1065 2.028043 GGTGTTGCTTGCTGGCAC 59.972 61.111 3.82 1.04 42.27 5.01
1056 1066 2.784356 GGTGTTGCTTGCTGGCACA 61.784 57.895 3.82 3.95 42.27 4.57
1120 1130 1.375396 CAGCGGACCGATTCAACCA 60.375 57.895 20.50 0.00 0.00 3.67
1155 1165 3.585862 GAGACCTATGCAGAAAACACGA 58.414 45.455 0.00 0.00 0.00 4.35
1172 1182 0.463295 CGATGCTTGTGATGGAGCCT 60.463 55.000 0.00 0.00 38.11 4.58
1327 1337 2.362369 CGGATGCTCTGTCCCCTGT 61.362 63.158 0.00 0.00 31.87 4.00
1342 1352 2.751837 TGTGCCGGTGTGCAAACA 60.752 55.556 9.76 0.00 44.11 2.83
1402 1412 6.894339 ATGACCTTAATTCTGTTTTCCGTT 57.106 33.333 0.00 0.00 0.00 4.44
1409 1419 8.015658 CCTTAATTCTGTTTTCCGTTAGAAGTG 58.984 37.037 0.00 0.00 35.40 3.16
1411 1421 9.545105 TTAATTCTGTTTTCCGTTAGAAGTGTA 57.455 29.630 0.00 0.00 35.40 2.90
1420 1430 4.027065 CCGTTAGAAGTGTACGATCTTCG 58.973 47.826 14.81 12.23 46.93 3.79
1447 1457 3.327464 TGAATGGATTGGATAGGATCGCA 59.673 43.478 0.00 0.00 0.00 5.10
1464 1474 2.033236 TCGCATTGTTCTTGTTGTCGAC 60.033 45.455 9.11 9.11 0.00 4.20
1466 1476 3.035942 GCATTGTTCTTGTTGTCGACAC 58.964 45.455 19.90 13.95 38.18 3.67
1501 1512 5.754890 GGATGTGAAATGTGCAGAACTTTTT 59.245 36.000 0.00 0.00 36.54 1.94
1502 1513 6.292488 GGATGTGAAATGTGCAGAACTTTTTG 60.292 38.462 0.00 0.00 36.54 2.44
1503 1514 4.869297 TGTGAAATGTGCAGAACTTTTTGG 59.131 37.500 0.00 0.00 36.54 3.28
1550 1561 7.148573 GCGAGAGAAAGTTTCTGATCAAATGTA 60.149 37.037 22.68 0.00 40.87 2.29
1694 1739 9.586150 CGTATTCATCATGAAAAAGTATACTGC 57.414 33.333 6.06 0.00 40.12 4.40
1703 1748 9.206870 CATGAAAAAGTATACTGCCATTTTGTT 57.793 29.630 14.71 0.00 0.00 2.83
1704 1749 8.586570 TGAAAAAGTATACTGCCATTTTGTTG 57.413 30.769 14.71 0.00 0.00 3.33
1707 1752 7.945033 AAAGTATACTGCCATTTTGTTGTTG 57.055 32.000 6.06 0.00 0.00 3.33
1709 1754 6.677913 AGTATACTGCCATTTTGTTGTTGTC 58.322 36.000 4.10 0.00 0.00 3.18
1717 1762 4.261572 CCATTTTGTTGTTGTCGATCCTGT 60.262 41.667 0.00 0.00 0.00 4.00
1727 1772 3.812262 TGTCGATCCTGTAGGTCGATAA 58.188 45.455 20.31 13.32 43.73 1.75
1737 1782 7.486647 TCCTGTAGGTCGATAACTTACAATTC 58.513 38.462 0.00 0.00 46.24 2.17
1747 1792 8.664798 TCGATAACTTACAATTCCAGTGATTTG 58.335 33.333 0.00 0.00 37.69 2.32
1798 1843 9.883142 ACAAAAGAAAATTCACACCTAAAATCA 57.117 25.926 0.00 0.00 0.00 2.57
1840 1890 4.390603 CGGTTTGATTGATACGGTTCTTCA 59.609 41.667 0.00 0.00 0.00 3.02
1844 1894 6.908870 TTGATTGATACGGTTCTTCATCTG 57.091 37.500 0.00 0.00 0.00 2.90
1849 1899 6.275494 TGATACGGTTCTTCATCTGTTACA 57.725 37.500 0.00 0.00 0.00 2.41
1851 1901 4.866508 ACGGTTCTTCATCTGTTACAGA 57.133 40.909 17.87 17.87 44.99 3.41
1852 1902 5.209818 ACGGTTCTTCATCTGTTACAGAA 57.790 39.130 19.42 0.45 44.04 3.02
1857 1907 8.383619 CGGTTCTTCATCTGTTACAGAAAATAG 58.616 37.037 19.42 13.31 44.04 1.73
1897 2099 4.143326 CCACATCGTGTCGTGCATATAATC 60.143 45.833 0.00 0.00 0.00 1.75
1965 2167 2.270205 CTTGATGCAGAGGCCGGT 59.730 61.111 1.90 0.00 40.13 5.28
2101 2303 7.981789 TGTGTTCTTAAAACCAAATATGCACAA 59.018 29.630 0.00 0.00 0.00 3.33
2128 2330 2.666272 TTGGGCTGTTGAACCATACA 57.334 45.000 0.00 0.00 33.63 2.29
2158 2360 9.061610 GTAAATAATTTCGGTGTGATCTTGTTG 57.938 33.333 0.00 0.00 0.00 3.33
2249 2451 2.450476 GAATGCTCCCACAAGTTCCAT 58.550 47.619 0.00 0.00 0.00 3.41
2258 2460 3.255642 CCCACAAGTTCCATTTTCGATGT 59.744 43.478 0.00 0.00 0.00 3.06
2329 2531 2.028130 CGTCTGGAAGCATCTACCTCT 58.972 52.381 0.00 0.00 0.00 3.69
2343 2545 2.437359 CTCTCCCAGCCAAAGCGG 60.437 66.667 0.00 0.00 46.67 5.52
2434 2636 5.645067 TCGAATCTAAGACTACGAGTGGAAA 59.355 40.000 0.00 0.00 0.00 3.13
2472 2674 1.303643 GGGGCTTCTGGTGTTGAGG 60.304 63.158 0.00 0.00 0.00 3.86
2496 2698 1.338674 TGTCGTTCGCTGAATTCCCAT 60.339 47.619 2.27 0.00 0.00 4.00
2586 2801 2.050077 CGTCTGCGAGCTCACACA 60.050 61.111 15.40 7.70 41.33 3.72
2685 2900 1.982612 CGTTCTGAGCTTCGTGATCA 58.017 50.000 0.00 0.00 38.94 2.92
2753 2968 3.081554 GCTTGGAGCCTCTTCCCA 58.918 61.111 0.00 0.00 36.35 4.37
2872 3087 2.617274 GGAAAGCAGCGTGGGTGAC 61.617 63.158 0.00 0.00 32.22 3.67
3075 3296 1.076014 TACCAGGACTCTGCGGTGA 59.924 57.895 0.68 0.00 39.61 4.02
3126 3347 0.179134 GTTCTCCTCCATCGACACGG 60.179 60.000 0.00 0.00 0.00 4.94
3147 3368 2.491022 GGAGAGATCCCGGACGTGG 61.491 68.421 0.73 0.00 0.00 4.94
3149 3370 1.305046 AGAGATCCCGGACGTGGTT 60.305 57.895 0.73 0.00 0.00 3.67
3150 3371 1.153628 GAGATCCCGGACGTGGTTG 60.154 63.158 0.73 0.00 0.00 3.77
3152 3373 2.926242 ATCCCGGACGTGGTTGGT 60.926 61.111 0.73 0.00 0.00 3.67
3163 3384 0.738412 GTGGTTGGTCGGTACATCGG 60.738 60.000 0.00 0.00 0.00 4.18
3209 3430 2.029844 GACACGGCTGAGCTTCCAC 61.030 63.158 3.72 0.00 0.00 4.02
3238 3459 4.694233 AGGCGTGCTGCTCACCTG 62.694 66.667 10.21 0.00 45.43 4.00
3242 3463 3.418068 GTGCTGCTCACCTGCGTC 61.418 66.667 0.00 0.00 40.88 5.19
3276 3497 1.446272 GCCAGCACTGTAGACGGTC 60.446 63.158 0.00 0.00 32.07 4.79
3282 3503 1.935300 GCACTGTAGACGGTCACAAGG 60.935 57.143 11.27 8.34 32.07 3.61
3330 3551 1.918467 TTACGCCGGAGAGGAGAGGA 61.918 60.000 13.83 0.00 43.02 3.71
3344 3565 2.303022 GGAGAGGAACATTCTGGTCACA 59.697 50.000 0.00 0.00 35.30 3.58
3345 3566 3.594134 GAGAGGAACATTCTGGTCACAG 58.406 50.000 0.00 0.00 46.30 3.66
3507 3728 1.442184 CCGTTGTCAGTCGAGGTCG 60.442 63.158 0.00 0.00 41.45 4.79
3610 3831 0.383231 GCAATGATCTTGGAAGGGCG 59.617 55.000 0.00 0.00 0.00 6.13
3635 3856 1.817099 GGAGCTTGAGTCATGGGCG 60.817 63.158 8.02 0.00 0.00 6.13
3637 3858 0.674895 GAGCTTGAGTCATGGGCGTT 60.675 55.000 8.02 0.00 0.00 4.84
3639 3860 1.237285 GCTTGAGTCATGGGCGTTGT 61.237 55.000 8.02 0.00 0.00 3.32
3646 3867 2.112297 ATGGGCGTTGTTGTCGGT 59.888 55.556 0.00 0.00 0.00 4.69
3653 3874 2.962786 TTGTTGTCGGTGGACGCG 60.963 61.111 3.53 3.53 46.49 6.01
3689 3910 2.185608 GCCGAGCTGAGGGAGTTC 59.814 66.667 0.00 0.00 0.00 3.01
3699 3920 0.545548 GAGGGAGTTCCAGGACAGGT 60.546 60.000 0.00 0.00 38.24 4.00
3725 3946 1.964373 AAGGCAACGGTACAAGCGG 60.964 57.895 3.43 0.00 44.33 5.52
3748 3969 3.327754 CCGCGCGTACATACTGGC 61.328 66.667 29.95 0.00 0.00 4.85
3758 3979 1.819632 CATACTGGCCGCCCTGAAC 60.820 63.158 7.03 0.00 34.43 3.18
3772 3993 4.980805 GAACGCTCACCCGTGGCA 62.981 66.667 8.39 0.00 41.90 4.92
3831 4052 1.918800 GGCCTCACCCACACCTACT 60.919 63.158 0.00 0.00 0.00 2.57
3840 5697 3.145551 ACACCTACTAGGCGCCCG 61.146 66.667 26.15 17.88 39.63 6.13
3842 5699 4.453892 ACCTACTAGGCGCCCGGT 62.454 66.667 26.15 23.84 39.63 5.28
3846 5703 1.152694 TACTAGGCGCCCGGTATGT 60.153 57.895 26.15 15.05 0.00 2.29
3878 5735 0.036952 ATCGGTCACAGTTGCTCCTG 60.037 55.000 2.20 2.20 38.45 3.86
3884 5741 2.032528 CAGTTGCTCCTGCCCGAA 59.967 61.111 0.00 0.00 38.71 4.30
3942 5799 0.106819 ATCCAGCATCCTCACCTTGC 60.107 55.000 0.00 0.00 36.63 4.01
3954 5811 4.760047 CCTTGCCGGTCGGTCAGG 62.760 72.222 11.25 11.92 37.65 3.86
4000 5875 5.056480 CACCATGACTCTGACTTGTTAACA 58.944 41.667 3.59 3.59 0.00 2.41
4001 5876 5.178252 CACCATGACTCTGACTTGTTAACAG 59.822 44.000 8.56 6.02 0.00 3.16
4002 5877 5.163301 ACCATGACTCTGACTTGTTAACAGT 60.163 40.000 8.56 9.13 33.93 3.55
4003 5878 6.041637 ACCATGACTCTGACTTGTTAACAGTA 59.958 38.462 8.56 0.00 33.93 2.74
4004 5879 6.929049 CCATGACTCTGACTTGTTAACAGTAA 59.071 38.462 8.56 2.27 33.93 2.24
4005 5880 7.441157 CCATGACTCTGACTTGTTAACAGTAAA 59.559 37.037 8.56 0.00 33.93 2.01
4006 5881 8.491152 CATGACTCTGACTTGTTAACAGTAAAG 58.509 37.037 8.56 5.96 33.93 1.85
4007 5882 7.553334 TGACTCTGACTTGTTAACAGTAAAGT 58.447 34.615 8.56 9.28 35.62 2.66
4008 5883 7.491372 TGACTCTGACTTGTTAACAGTAAAGTG 59.509 37.037 13.94 13.66 33.14 3.16
4010 5885 7.491696 ACTCTGACTTGTTAACAGTAAAGTGAC 59.508 37.037 13.94 3.51 33.14 3.67
4011 5886 7.324935 TCTGACTTGTTAACAGTAAAGTGACA 58.675 34.615 13.94 7.19 33.14 3.58
4012 5887 7.985184 TCTGACTTGTTAACAGTAAAGTGACAT 59.015 33.333 13.94 0.00 33.14 3.06
4073 5955 5.127031 TCACGGATCTCAACATAAGATGTCA 59.873 40.000 0.00 0.00 44.07 3.58
4080 5962 9.887629 GATCTCAACATAAGATGTCATGGATAT 57.112 33.333 0.00 0.00 44.07 1.63
4086 5968 9.610705 AACATAAGATGTCATGGATATAGCATC 57.389 33.333 0.00 0.00 44.07 3.91
4090 5972 2.093500 TGTCATGGATATAGCATCGGCC 60.093 50.000 0.00 0.00 42.56 6.13
4106 5988 0.533032 GGCCGAGACTTAGCAAGACT 59.467 55.000 0.00 2.60 36.25 3.24
4107 5989 1.749634 GGCCGAGACTTAGCAAGACTA 59.250 52.381 0.00 0.00 33.75 2.59
4116 5998 9.784680 CGAGACTTAGCAAGACTATAAAACTAA 57.215 33.333 3.37 0.00 33.75 2.24
4128 6010 8.021973 AGACTATAAAACTAAGACGCCGATATG 58.978 37.037 0.00 0.00 0.00 1.78
4131 6013 3.386768 AACTAAGACGCCGATATGCAT 57.613 42.857 3.79 3.79 0.00 3.96
4150 6032 3.064682 GCATCACACGTGTGGCATAATAA 59.935 43.478 39.88 23.42 45.65 1.40
4157 6039 3.944650 ACGTGTGGCATAATAAGCATTCA 59.055 39.130 0.00 0.00 0.00 2.57
4182 6064 0.613260 ATACCGTGTGTGGCATGAGT 59.387 50.000 0.00 0.00 36.21 3.41
4186 6068 0.246360 CGTGTGTGGCATGAGTAGGA 59.754 55.000 0.00 0.00 36.21 2.94
4188 6070 1.276421 GTGTGTGGCATGAGTAGGAGT 59.724 52.381 0.00 0.00 0.00 3.85
4192 6075 2.035632 GTGGCATGAGTAGGAGTAGCT 58.964 52.381 0.00 0.00 0.00 3.32
4227 6110 2.224426 TGTGGGCGAACAGTAGAATTGT 60.224 45.455 0.00 0.00 0.00 2.71
4252 6135 0.944311 CGTGTGGACGCAGCTACTTT 60.944 55.000 0.00 0.00 39.10 2.66
4271 6154 0.960861 TGTGCCACACGTCCAACAAA 60.961 50.000 0.00 0.00 37.14 2.83
4281 6164 5.464057 CACACGTCCAACAAATACTACTCAA 59.536 40.000 0.00 0.00 0.00 3.02
4282 6165 6.147164 CACACGTCCAACAAATACTACTCAAT 59.853 38.462 0.00 0.00 0.00 2.57
4283 6166 6.367969 ACACGTCCAACAAATACTACTCAATC 59.632 38.462 0.00 0.00 0.00 2.67
4290 6173 4.788617 ACAAATACTACTCAATCCCACCCT 59.211 41.667 0.00 0.00 0.00 4.34
4358 6241 7.775808 AGCTACATTAGGTATCCATGGGATGG 61.776 46.154 13.02 0.00 43.06 3.51
4442 6546 5.975344 CCGTCTAGCAAACGAATCATAGTTA 59.025 40.000 4.17 0.00 42.62 2.24
4472 6576 2.817258 GTTTGCCTAGTTGCCATGTACA 59.183 45.455 0.00 0.00 0.00 2.90
4521 6625 2.279918 ACTGTCGTGTGGGCGAAC 60.280 61.111 0.00 0.00 42.82 3.95
4560 6675 2.980233 GTGGCTGTGTGGGCAGAC 60.980 66.667 0.00 0.00 44.53 3.51
4570 6685 0.317479 GTGGGCAGACACTAGTTCGT 59.683 55.000 0.00 0.00 38.32 3.85
4575 6690 1.965083 CAGACACTAGTTCGTCCACG 58.035 55.000 9.19 0.00 41.45 4.94
4598 6713 2.620112 GCAGCTGGCAATCACGTGT 61.620 57.895 17.12 0.00 43.97 4.49
4602 6717 0.030638 GCTGGCAATCACGTGTTGTT 59.969 50.000 22.79 12.74 0.00 2.83
4614 6729 2.831284 GTTGTTGGGCGTGTGGGT 60.831 61.111 0.00 0.00 0.00 4.51
4632 6747 3.356529 GGTGACCTCTTCAATGTCCAT 57.643 47.619 0.00 0.00 35.39 3.41
4641 6756 0.908910 TCAATGTCCATACACCGGCT 59.091 50.000 0.00 0.00 38.78 5.52
4654 6769 1.005394 CCGGCTTTGTCCTACGTGT 60.005 57.895 0.00 0.00 0.00 4.49
4686 6801 1.202758 TGCCTCGGTGTGTCAAGATTT 60.203 47.619 0.00 0.00 0.00 2.17
4687 6802 2.037902 TGCCTCGGTGTGTCAAGATTTA 59.962 45.455 0.00 0.00 0.00 1.40
4690 6805 4.253685 CCTCGGTGTGTCAAGATTTATGT 58.746 43.478 0.00 0.00 0.00 2.29
4694 6809 7.065803 CCTCGGTGTGTCAAGATTTATGTAAAT 59.934 37.037 0.00 0.00 38.51 1.40
4706 6821 8.721019 AGATTTATGTAAATTTAACCGGACGA 57.279 30.769 9.46 0.00 36.13 4.20
4714 6829 7.551974 TGTAAATTTAACCGGACGATAATCCAA 59.448 33.333 9.46 0.00 38.87 3.53
4715 6830 5.996669 ATTTAACCGGACGATAATCCAAC 57.003 39.130 9.46 0.00 38.87 3.77
4716 6831 4.741321 TTAACCGGACGATAATCCAACT 57.259 40.909 9.46 0.00 38.87 3.16
4739 6854 0.950836 TGGACGAGTTGCAATGTTGG 59.049 50.000 0.59 0.00 0.00 3.77
4745 6860 0.822811 AGTTGCAATGTTGGCACACA 59.177 45.000 0.59 5.25 41.75 3.72
4766 6881 2.542597 TGTGAGCGTTAGTGTTTTCGT 58.457 42.857 0.00 0.00 0.00 3.85
4783 6898 7.402331 GTTTTCGTAAAACTATAGCTTTCGC 57.598 36.000 4.41 0.09 45.55 4.70
4784 6899 7.232300 GTTTTCGTAAAACTATAGCTTTCGCT 58.768 34.615 4.41 0.00 46.39 4.93
4792 6907 3.959478 TAGCTTTCGCTATCCGGTG 57.041 52.632 0.00 0.00 46.79 4.94
4793 6908 1.395635 TAGCTTTCGCTATCCGGTGA 58.604 50.000 0.00 0.00 46.79 4.02
4794 6909 0.179108 AGCTTTCGCTATCCGGTGAC 60.179 55.000 0.00 0.00 46.79 3.67
4795 6910 0.459585 GCTTTCGCTATCCGGTGACA 60.460 55.000 0.00 0.00 37.59 3.58
4796 6911 1.806623 GCTTTCGCTATCCGGTGACAT 60.807 52.381 0.00 0.00 37.59 3.06
4797 6912 1.860950 CTTTCGCTATCCGGTGACATG 59.139 52.381 0.00 0.00 37.59 3.21
4798 6913 0.821517 TTCGCTATCCGGTGACATGT 59.178 50.000 0.00 0.00 37.59 3.21
4799 6914 0.821517 TCGCTATCCGGTGACATGTT 59.178 50.000 0.00 0.00 37.59 2.71
4800 6915 2.025898 TCGCTATCCGGTGACATGTTA 58.974 47.619 0.00 0.00 37.59 2.41
4801 6916 2.427812 TCGCTATCCGGTGACATGTTAA 59.572 45.455 0.00 0.00 37.59 2.01
4802 6917 3.069016 TCGCTATCCGGTGACATGTTAAT 59.931 43.478 0.00 0.00 37.59 1.40
4803 6918 4.278919 TCGCTATCCGGTGACATGTTAATA 59.721 41.667 0.00 0.00 37.59 0.98
4804 6919 4.621460 CGCTATCCGGTGACATGTTAATAG 59.379 45.833 0.00 1.38 0.00 1.73
4805 6920 4.389077 GCTATCCGGTGACATGTTAATAGC 59.611 45.833 13.23 13.23 35.19 2.97
4806 6921 3.897141 TCCGGTGACATGTTAATAGCA 57.103 42.857 0.00 0.00 0.00 3.49
4807 6922 4.415881 TCCGGTGACATGTTAATAGCAT 57.584 40.909 0.00 0.00 0.00 3.79
4808 6923 4.126437 TCCGGTGACATGTTAATAGCATG 58.874 43.478 14.23 14.23 46.51 4.06
4816 6931 5.984233 CATGTTAATAGCATGTACACCGT 57.016 39.130 8.65 0.00 38.96 4.83
4818 6933 7.471657 CATGTTAATAGCATGTACACCGTAA 57.528 36.000 8.65 0.00 38.96 3.18
4819 6934 6.890663 TGTTAATAGCATGTACACCGTAAC 57.109 37.500 0.00 2.68 0.00 2.50
4820 6935 6.396450 TGTTAATAGCATGTACACCGTAACA 58.604 36.000 0.00 5.18 0.00 2.41
4821 6936 7.042950 TGTTAATAGCATGTACACCGTAACAT 58.957 34.615 0.00 0.00 36.78 2.71
4826 6941 3.591023 CATGTACACCGTAACATGGTCA 58.409 45.455 14.36 0.00 45.94 4.02
4827 6942 3.965379 TGTACACCGTAACATGGTCAT 57.035 42.857 0.00 0.00 34.66 3.06
4828 6943 4.274602 TGTACACCGTAACATGGTCATT 57.725 40.909 0.00 0.00 34.66 2.57
4829 6944 3.997681 TGTACACCGTAACATGGTCATTG 59.002 43.478 0.00 0.00 34.66 2.82
4830 6945 2.432444 ACACCGTAACATGGTCATTGG 58.568 47.619 0.00 0.00 34.66 3.16
4831 6946 1.742831 CACCGTAACATGGTCATTGGG 59.257 52.381 0.00 0.00 34.66 4.12
4832 6947 1.353022 ACCGTAACATGGTCATTGGGT 59.647 47.619 0.00 0.00 29.77 4.51
4833 6948 2.014128 CCGTAACATGGTCATTGGGTC 58.986 52.381 0.00 0.00 0.00 4.46
4834 6949 1.663643 CGTAACATGGTCATTGGGTCG 59.336 52.381 0.00 0.00 0.00 4.79
4835 6950 2.675603 CGTAACATGGTCATTGGGTCGA 60.676 50.000 0.00 0.00 0.00 4.20
4836 6951 2.577606 AACATGGTCATTGGGTCGAA 57.422 45.000 0.00 0.00 0.00 3.71
4837 6952 2.577606 ACATGGTCATTGGGTCGAAA 57.422 45.000 0.00 0.00 0.00 3.46
4838 6953 2.870175 ACATGGTCATTGGGTCGAAAA 58.130 42.857 0.00 0.00 0.00 2.29
4839 6954 3.430453 ACATGGTCATTGGGTCGAAAAT 58.570 40.909 0.00 0.00 0.00 1.82
4840 6955 3.443681 ACATGGTCATTGGGTCGAAAATC 59.556 43.478 0.00 0.00 0.00 2.17
4841 6956 3.147553 TGGTCATTGGGTCGAAAATCA 57.852 42.857 0.00 0.00 0.00 2.57
4842 6957 3.491342 TGGTCATTGGGTCGAAAATCAA 58.509 40.909 0.00 0.00 0.00 2.57
4843 6958 4.085733 TGGTCATTGGGTCGAAAATCAAT 58.914 39.130 0.00 0.00 0.00 2.57
4844 6959 5.257262 TGGTCATTGGGTCGAAAATCAATA 58.743 37.500 0.00 0.00 0.00 1.90
4845 6960 5.356751 TGGTCATTGGGTCGAAAATCAATAG 59.643 40.000 0.00 0.00 0.00 1.73
4846 6961 5.273944 GTCATTGGGTCGAAAATCAATAGC 58.726 41.667 0.00 0.00 0.00 2.97
4847 6962 4.338118 TCATTGGGTCGAAAATCAATAGCC 59.662 41.667 0.00 0.00 0.00 3.93
4848 6963 2.650322 TGGGTCGAAAATCAATAGCCC 58.350 47.619 0.00 0.00 35.59 5.19
4849 6964 2.025793 TGGGTCGAAAATCAATAGCCCA 60.026 45.455 0.00 0.00 42.03 5.36
4850 6965 2.618709 GGGTCGAAAATCAATAGCCCAG 59.381 50.000 0.00 0.00 35.15 4.45
4851 6966 3.541632 GGTCGAAAATCAATAGCCCAGA 58.458 45.455 0.00 0.00 0.00 3.86
4852 6967 4.137543 GGTCGAAAATCAATAGCCCAGAT 58.862 43.478 0.00 0.00 0.00 2.90
4853 6968 4.214332 GGTCGAAAATCAATAGCCCAGATC 59.786 45.833 0.00 0.00 0.00 2.75
4854 6969 4.816385 GTCGAAAATCAATAGCCCAGATCA 59.184 41.667 0.00 0.00 0.00 2.92
4855 6970 4.816385 TCGAAAATCAATAGCCCAGATCAC 59.184 41.667 0.00 0.00 0.00 3.06
4856 6971 4.576053 CGAAAATCAATAGCCCAGATCACA 59.424 41.667 0.00 0.00 0.00 3.58
4857 6972 5.240183 CGAAAATCAATAGCCCAGATCACAT 59.760 40.000 0.00 0.00 0.00 3.21
4858 6973 6.427853 CGAAAATCAATAGCCCAGATCACATA 59.572 38.462 0.00 0.00 0.00 2.29
4859 6974 7.516198 AAAATCAATAGCCCAGATCACATAC 57.484 36.000 0.00 0.00 0.00 2.39
4860 6975 6.445451 AATCAATAGCCCAGATCACATACT 57.555 37.500 0.00 0.00 0.00 2.12
4861 6976 5.219343 TCAATAGCCCAGATCACATACTG 57.781 43.478 0.00 0.00 0.00 2.74
4862 6977 4.655649 TCAATAGCCCAGATCACATACTGT 59.344 41.667 0.00 0.00 32.93 3.55
4863 6978 5.838521 TCAATAGCCCAGATCACATACTGTA 59.161 40.000 0.00 0.00 32.93 2.74
4864 6979 5.991933 ATAGCCCAGATCACATACTGTAG 57.008 43.478 0.00 0.00 32.93 2.74
4865 6980 2.366916 AGCCCAGATCACATACTGTAGC 59.633 50.000 0.00 0.00 34.20 3.58
4866 6981 2.103094 GCCCAGATCACATACTGTAGCA 59.897 50.000 0.00 0.00 34.18 3.49
4867 6982 3.244353 GCCCAGATCACATACTGTAGCAT 60.244 47.826 0.00 0.00 34.18 3.79
4868 6983 4.744867 GCCCAGATCACATACTGTAGCATT 60.745 45.833 0.00 0.00 34.18 3.56
4869 6984 5.511373 GCCCAGATCACATACTGTAGCATTA 60.511 44.000 0.00 0.00 34.18 1.90
4870 6985 6.524734 CCCAGATCACATACTGTAGCATTAA 58.475 40.000 0.00 0.00 32.93 1.40
4871 6986 6.992123 CCCAGATCACATACTGTAGCATTAAA 59.008 38.462 0.00 0.00 32.93 1.52
4872 6987 7.041780 CCCAGATCACATACTGTAGCATTAAAC 60.042 40.741 0.00 0.00 32.93 2.01
4873 6988 7.306807 CCAGATCACATACTGTAGCATTAAACG 60.307 40.741 0.00 0.00 32.93 3.60
4874 6989 5.712217 TCACATACTGTAGCATTAAACGC 57.288 39.130 0.00 0.00 0.00 4.84
4875 6990 5.416083 TCACATACTGTAGCATTAAACGCT 58.584 37.500 7.77 7.77 43.62 5.07
4876 6991 5.290885 TCACATACTGTAGCATTAAACGCTG 59.709 40.000 11.86 0.27 40.73 5.18
4877 6992 5.063438 CACATACTGTAGCATTAAACGCTGT 59.937 40.000 11.86 5.37 40.73 4.40
4878 6993 5.642063 ACATACTGTAGCATTAAACGCTGTT 59.358 36.000 11.86 0.00 40.73 3.16
4879 6994 6.814644 ACATACTGTAGCATTAAACGCTGTTA 59.185 34.615 11.86 0.83 40.73 2.41
4880 6995 5.779806 ACTGTAGCATTAAACGCTGTTAG 57.220 39.130 11.86 9.51 40.73 2.34
4881 6996 5.235516 ACTGTAGCATTAAACGCTGTTAGT 58.764 37.500 11.86 9.98 40.73 2.24
4882 6997 5.347907 ACTGTAGCATTAAACGCTGTTAGTC 59.652 40.000 11.86 0.00 40.73 2.59
4883 6998 3.991605 AGCATTAAACGCTGTTAGTCG 57.008 42.857 2.17 0.00 38.60 4.18
4884 6999 3.323243 AGCATTAAACGCTGTTAGTCGT 58.677 40.909 2.17 0.00 38.60 4.34
4885 7000 3.122948 AGCATTAAACGCTGTTAGTCGTG 59.877 43.478 2.17 0.00 38.60 4.35
4886 7001 3.120786 GCATTAAACGCTGTTAGTCGTGT 60.121 43.478 0.00 0.00 39.06 4.49
4887 7002 4.090354 GCATTAAACGCTGTTAGTCGTGTA 59.910 41.667 0.00 0.00 39.06 2.90
4888 7003 5.535616 CATTAAACGCTGTTAGTCGTGTAC 58.464 41.667 0.00 0.00 39.06 2.90
4889 7004 3.360249 AAACGCTGTTAGTCGTGTACT 57.640 42.857 0.00 0.00 42.62 2.73
4890 7005 2.327081 ACGCTGTTAGTCGTGTACTG 57.673 50.000 0.00 0.00 39.39 2.74
4891 7006 1.605710 ACGCTGTTAGTCGTGTACTGT 59.394 47.619 0.00 0.00 39.39 3.55
4892 7007 2.033801 ACGCTGTTAGTCGTGTACTGTT 59.966 45.455 0.00 0.00 39.39 3.16
4893 7008 3.047796 CGCTGTTAGTCGTGTACTGTTT 58.952 45.455 0.00 0.00 39.39 2.83
4894 7009 3.121463 CGCTGTTAGTCGTGTACTGTTTG 60.121 47.826 0.00 0.00 39.39 2.93
4895 7010 3.183775 GCTGTTAGTCGTGTACTGTTTGG 59.816 47.826 0.00 0.00 39.39 3.28
4896 7011 3.125316 TGTTAGTCGTGTACTGTTTGGC 58.875 45.455 0.00 0.00 39.39 4.52
4897 7012 3.125316 GTTAGTCGTGTACTGTTTGGCA 58.875 45.455 0.00 0.00 39.39 4.92
4906 7021 2.571548 CTGTTTGGCAGGGATGTCC 58.428 57.895 0.00 0.00 41.42 4.02
4908 7023 1.281867 CTGTTTGGCAGGGATGTCCTA 59.718 52.381 0.00 0.00 46.12 2.94
4909 7024 1.922447 TGTTTGGCAGGGATGTCCTAT 59.078 47.619 0.00 0.00 46.12 2.57
4910 7025 2.301346 GTTTGGCAGGGATGTCCTATG 58.699 52.381 0.00 0.35 46.12 2.23
4911 7026 1.595311 TTGGCAGGGATGTCCTATGT 58.405 50.000 0.00 0.00 46.12 2.29
4912 7027 0.839277 TGGCAGGGATGTCCTATGTG 59.161 55.000 0.00 0.00 46.12 3.21
4913 7028 1.131638 GGCAGGGATGTCCTATGTGA 58.868 55.000 0.00 0.00 46.12 3.58
4914 7029 1.202698 GGCAGGGATGTCCTATGTGAC 60.203 57.143 0.00 0.00 46.12 3.67
4915 7030 1.539065 GCAGGGATGTCCTATGTGACG 60.539 57.143 0.00 0.00 46.12 4.35
4916 7031 0.753262 AGGGATGTCCTATGTGACGC 59.247 55.000 0.00 0.00 45.98 5.19
4917 7032 0.597637 GGGATGTCCTATGTGACGCG 60.598 60.000 3.53 3.53 38.11 6.01
4918 7033 0.102481 GGATGTCCTATGTGACGCGT 59.898 55.000 13.85 13.85 38.11 6.01
4919 7034 1.470979 GGATGTCCTATGTGACGCGTT 60.471 52.381 15.53 0.00 38.11 4.84
4920 7035 1.852895 GATGTCCTATGTGACGCGTTC 59.147 52.381 15.53 10.96 38.11 3.95
4921 7036 0.885879 TGTCCTATGTGACGCGTTCT 59.114 50.000 15.53 0.66 38.11 3.01
4922 7037 1.269166 GTCCTATGTGACGCGTTCTG 58.731 55.000 15.53 0.78 0.00 3.02
4923 7038 0.457853 TCCTATGTGACGCGTTCTGC 60.458 55.000 15.53 0.00 41.47 4.26
4924 7039 0.735978 CCTATGTGACGCGTTCTGCA 60.736 55.000 15.53 10.78 46.97 4.41
4925 7040 1.280982 CTATGTGACGCGTTCTGCAT 58.719 50.000 15.53 17.03 46.97 3.96
4926 7041 1.256376 CTATGTGACGCGTTCTGCATC 59.744 52.381 15.53 0.00 46.97 3.91
4927 7042 0.670239 ATGTGACGCGTTCTGCATCA 60.670 50.000 15.53 0.78 44.78 3.07
4928 7043 3.860717 TGACGCGTTCTGCATCAG 58.139 55.556 15.53 0.00 41.60 2.90
4929 7044 1.737735 TGACGCGTTCTGCATCAGG 60.738 57.895 15.53 0.00 41.60 3.86
4930 7045 1.446099 GACGCGTTCTGCATCAGGA 60.446 57.895 15.53 0.00 46.97 3.86
4931 7046 0.807667 GACGCGTTCTGCATCAGGAT 60.808 55.000 15.53 0.00 46.97 3.24
4932 7047 1.086067 ACGCGTTCTGCATCAGGATG 61.086 55.000 5.58 4.91 46.97 3.51
4946 7061 4.592485 TCAGGATGCTAAAGCTACTAGC 57.408 45.455 17.09 17.09 41.83 3.42
4947 7062 3.322254 TCAGGATGCTAAAGCTACTAGCC 59.678 47.826 19.79 9.27 40.95 3.93
4948 7063 3.070159 CAGGATGCTAAAGCTACTAGCCA 59.930 47.826 19.79 11.47 43.77 4.75
4949 7064 3.323403 AGGATGCTAAAGCTACTAGCCAG 59.677 47.826 19.79 1.67 43.77 4.85
4950 7065 3.070302 GGATGCTAAAGCTACTAGCCAGT 59.930 47.826 19.79 9.80 43.77 4.00
4951 7066 3.526931 TGCTAAAGCTACTAGCCAGTG 57.473 47.619 19.79 0.00 43.77 3.66
4952 7067 2.205911 GCTAAAGCTACTAGCCAGTGC 58.794 52.381 14.20 0.00 43.77 4.40
4953 7068 2.464865 CTAAAGCTACTAGCCAGTGCG 58.535 52.381 4.32 0.00 43.77 5.34
4954 7069 0.895530 AAAGCTACTAGCCAGTGCGA 59.104 50.000 4.32 0.00 43.77 5.10
4955 7070 0.173708 AAGCTACTAGCCAGTGCGAC 59.826 55.000 4.32 0.00 43.77 5.19
4956 7071 0.965866 AGCTACTAGCCAGTGCGACA 60.966 55.000 4.32 0.00 43.77 4.35
4957 7072 0.802607 GCTACTAGCCAGTGCGACAC 60.803 60.000 0.00 2.28 44.33 3.67
4958 7073 0.523546 CTACTAGCCAGTGCGACACG 60.524 60.000 0.00 0.00 44.33 4.49
4959 7074 1.929806 TACTAGCCAGTGCGACACGG 61.930 60.000 0.00 12.61 44.33 4.94
4960 7075 3.282745 CTAGCCAGTGCGACACGGT 62.283 63.158 15.77 7.96 44.33 4.83
4961 7076 3.277211 TAGCCAGTGCGACACGGTC 62.277 63.158 15.77 0.00 44.33 4.79
4962 7077 4.961511 GCCAGTGCGACACGGTCA 62.962 66.667 15.77 0.00 39.64 4.02
4963 7078 3.036084 CCAGTGCGACACGGTCAC 61.036 66.667 8.63 0.00 39.64 3.67
4964 7079 2.027605 CAGTGCGACACGGTCACT 59.972 61.111 4.69 0.00 41.29 3.41
4965 7080 1.591594 CAGTGCGACACGGTCACTT 60.592 57.895 0.00 0.00 38.85 3.16
4966 7081 1.143183 AGTGCGACACGGTCACTTT 59.857 52.632 4.69 0.00 37.78 2.66
4967 7082 0.461339 AGTGCGACACGGTCACTTTT 60.461 50.000 4.69 0.00 37.78 2.27
4968 7083 0.315869 GTGCGACACGGTCACTTTTG 60.316 55.000 5.15 0.00 32.09 2.44
4969 7084 0.741574 TGCGACACGGTCACTTTTGT 60.742 50.000 5.15 0.00 32.09 2.83
4985 7100 7.473691 CACTTTTGTGTACATATAACAACGC 57.526 36.000 0.00 0.00 44.94 4.84
4986 7101 6.245503 CACTTTTGTGTACATATAACAACGCG 59.754 38.462 3.53 3.53 44.94 6.01
4987 7102 6.145858 ACTTTTGTGTACATATAACAACGCGA 59.854 34.615 15.93 0.00 33.73 5.87
4988 7103 5.438821 TTGTGTACATATAACAACGCGAC 57.561 39.130 15.93 0.00 0.00 5.19
4989 7104 4.735985 TGTGTACATATAACAACGCGACT 58.264 39.130 15.93 0.00 0.00 4.18
4990 7105 5.878133 TGTGTACATATAACAACGCGACTA 58.122 37.500 15.93 0.00 0.00 2.59
4991 7106 5.967088 TGTGTACATATAACAACGCGACTAG 59.033 40.000 15.93 1.12 0.00 2.57
4992 7107 5.967674 GTGTACATATAACAACGCGACTAGT 59.032 40.000 15.93 0.00 0.00 2.57
4993 7108 7.125755 GTGTACATATAACAACGCGACTAGTA 58.874 38.462 15.93 0.00 0.00 1.82
4994 7109 7.639850 GTGTACATATAACAACGCGACTAGTAA 59.360 37.037 15.93 0.00 0.00 2.24
4995 7110 8.180920 TGTACATATAACAACGCGACTAGTAAA 58.819 33.333 15.93 0.00 0.00 2.01
4996 7111 7.675270 ACATATAACAACGCGACTAGTAAAG 57.325 36.000 15.93 0.00 0.00 1.85
4997 7112 7.475015 ACATATAACAACGCGACTAGTAAAGA 58.525 34.615 15.93 0.00 0.00 2.52
4998 7113 7.970061 ACATATAACAACGCGACTAGTAAAGAA 59.030 33.333 15.93 0.00 0.00 2.52
4999 7114 8.800972 CATATAACAACGCGACTAGTAAAGAAA 58.199 33.333 15.93 0.00 0.00 2.52
5000 7115 4.961433 ACAACGCGACTAGTAAAGAAAC 57.039 40.909 15.93 0.00 0.00 2.78
5001 7116 4.362279 ACAACGCGACTAGTAAAGAAACA 58.638 39.130 15.93 0.00 0.00 2.83
5002 7117 4.805192 ACAACGCGACTAGTAAAGAAACAA 59.195 37.500 15.93 0.00 0.00 2.83
5003 7118 5.051240 ACAACGCGACTAGTAAAGAAACAAG 60.051 40.000 15.93 0.00 0.00 3.16
5004 7119 3.427863 ACGCGACTAGTAAAGAAACAAGC 59.572 43.478 15.93 0.00 0.00 4.01
5005 7120 3.673809 CGCGACTAGTAAAGAAACAAGCT 59.326 43.478 0.00 0.00 0.00 3.74
5006 7121 4.433022 CGCGACTAGTAAAGAAACAAGCTG 60.433 45.833 0.00 0.00 0.00 4.24
5007 7122 4.666908 GCGACTAGTAAAGAAACAAGCTGC 60.667 45.833 0.00 0.00 0.00 5.25
5008 7123 4.447724 CGACTAGTAAAGAAACAAGCTGCA 59.552 41.667 1.02 0.00 0.00 4.41
5009 7124 5.388890 CGACTAGTAAAGAAACAAGCTGCAG 60.389 44.000 10.11 10.11 0.00 4.41
5010 7125 3.632855 AGTAAAGAAACAAGCTGCAGC 57.367 42.857 31.53 31.53 42.49 5.25
5025 7140 2.346099 GCAGCGGCAAAACATAAAGA 57.654 45.000 3.18 0.00 40.72 2.52
5026 7141 2.671596 GCAGCGGCAAAACATAAAGAA 58.328 42.857 3.18 0.00 40.72 2.52
5027 7142 2.408368 GCAGCGGCAAAACATAAAGAAC 59.592 45.455 3.18 0.00 40.72 3.01
5028 7143 3.637432 CAGCGGCAAAACATAAAGAACA 58.363 40.909 1.45 0.00 0.00 3.18
5029 7144 4.047822 CAGCGGCAAAACATAAAGAACAA 58.952 39.130 1.45 0.00 0.00 2.83
5030 7145 4.048504 AGCGGCAAAACATAAAGAACAAC 58.951 39.130 1.45 0.00 0.00 3.32
5031 7146 4.048504 GCGGCAAAACATAAAGAACAACT 58.951 39.130 0.00 0.00 0.00 3.16
5032 7147 4.148174 GCGGCAAAACATAAAGAACAACTC 59.852 41.667 0.00 0.00 0.00 3.01
5033 7148 4.679654 CGGCAAAACATAAAGAACAACTCC 59.320 41.667 0.00 0.00 0.00 3.85
5034 7149 4.988540 GGCAAAACATAAAGAACAACTCCC 59.011 41.667 0.00 0.00 0.00 4.30
5035 7150 5.452636 GGCAAAACATAAAGAACAACTCCCA 60.453 40.000 0.00 0.00 0.00 4.37
5036 7151 6.045955 GCAAAACATAAAGAACAACTCCCAA 58.954 36.000 0.00 0.00 0.00 4.12
5037 7152 6.536941 GCAAAACATAAAGAACAACTCCCAAA 59.463 34.615 0.00 0.00 0.00 3.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 3.059188 GCTTCAGTCGATTCAAAAACGGA 60.059 43.478 0.00 0.00 0.00 4.69
94 95 0.530744 GGCTCCCAATTTTTCCGGTC 59.469 55.000 0.00 0.00 0.00 4.79
108 109 3.942439 GGTCCCTATGGCGGCTCC 61.942 72.222 11.43 0.00 0.00 4.70
113 114 1.102978 CTTTTTGGGTCCCTATGGCG 58.897 55.000 10.00 0.00 0.00 5.69
274 275 1.116536 TTCGTGTGTGGCCCTGTCTA 61.117 55.000 0.00 0.00 0.00 2.59
288 289 1.486310 TGATTCCCTGATCCCTTCGTG 59.514 52.381 0.00 0.00 0.00 4.35
424 426 2.994995 ACCACATCGGCACCTCGA 60.995 61.111 0.00 0.00 43.61 4.04
482 485 2.046023 CCACTGATGGCGCTGGAA 60.046 61.111 7.64 0.00 39.82 3.53
566 569 2.937379 ATCTGCTAAGCTGGCGCCTG 62.937 60.000 29.70 28.47 36.60 4.85
637 640 2.047179 GACCAAGGTCGAGGCCAC 60.047 66.667 5.01 0.00 35.30 5.01
647 650 2.125512 CCCGCTTCGAGACCAAGG 60.126 66.667 0.00 0.00 0.00 3.61
680 683 1.228228 GAAGCCATGGATCCCAGCA 59.772 57.895 18.40 0.00 36.75 4.41
724 727 2.107750 CCTGGCGCATCTCATCGT 59.892 61.111 10.83 0.00 0.00 3.73
749 752 0.043485 ACCAACCACCACCCCTTTTT 59.957 50.000 0.00 0.00 0.00 1.94
750 753 0.689412 CACCAACCACCACCCCTTTT 60.689 55.000 0.00 0.00 0.00 2.27
752 755 2.292785 GACACCAACCACCACCCCTT 62.293 60.000 0.00 0.00 0.00 3.95
775 778 6.463049 CGACCTTGAACCTATCATCTGGTATT 60.463 42.308 0.00 0.00 38.03 1.89
799 802 4.402793 AGAACATAATAGATCGATCCCCCG 59.597 45.833 21.66 8.45 0.00 5.73
870 875 4.263949 CCCTAGTTCATCCCTGTTTTTCCT 60.264 45.833 0.00 0.00 0.00 3.36
919 928 0.108804 GATCAGGAACGACTTGGCGA 60.109 55.000 1.78 0.00 34.83 5.54
925 934 0.898320 CCAGTGGATCAGGAACGACT 59.102 55.000 1.68 0.00 0.00 4.18
1033 1043 2.281761 AGCAAGCAACACCGGGAG 60.282 61.111 6.32 0.00 0.00 4.30
1034 1044 2.594303 CAGCAAGCAACACCGGGA 60.594 61.111 6.32 0.00 0.00 5.14
1035 1045 3.673484 CCAGCAAGCAACACCGGG 61.673 66.667 6.32 0.00 0.00 5.73
1036 1046 4.347453 GCCAGCAAGCAACACCGG 62.347 66.667 0.00 0.00 0.00 5.28
1037 1047 3.594775 TGCCAGCAAGCAACACCG 61.595 61.111 0.00 0.00 40.56 4.94
1038 1048 2.028043 GTGCCAGCAAGCAACACC 59.972 61.111 1.86 0.00 46.19 4.16
1039 1049 1.589727 GTGTGCCAGCAAGCAACAC 60.590 57.895 1.86 9.34 46.19 3.32
1040 1050 2.050934 TGTGTGCCAGCAAGCAACA 61.051 52.632 1.86 6.98 46.19 3.33
1041 1051 1.589727 GTGTGTGCCAGCAAGCAAC 60.590 57.895 1.86 4.74 46.19 4.17
1042 1052 1.727511 GAGTGTGTGCCAGCAAGCAA 61.728 55.000 1.86 0.00 46.19 3.91
1043 1053 2.124193 AGTGTGTGCCAGCAAGCA 60.124 55.556 0.00 0.00 41.46 3.91
1044 1054 2.641559 GAGTGTGTGCCAGCAAGC 59.358 61.111 0.00 0.00 0.00 4.01
1045 1055 2.263741 GGGAGTGTGTGCCAGCAAG 61.264 63.158 0.00 0.00 36.40 4.01
1046 1056 2.203337 GGGAGTGTGTGCCAGCAA 60.203 61.111 0.00 0.00 36.40 3.91
1047 1057 4.269523 GGGGAGTGTGTGCCAGCA 62.270 66.667 0.00 0.00 38.84 4.41
1049 1059 2.674563 TTTCGGGGAGTGTGTGCCAG 62.675 60.000 0.00 0.00 38.84 4.85
1050 1060 2.272230 TTTTCGGGGAGTGTGTGCCA 62.272 55.000 0.00 0.00 38.84 4.92
1051 1061 1.527380 TTTTCGGGGAGTGTGTGCC 60.527 57.895 0.00 0.00 35.33 5.01
1052 1062 1.652563 GTTTTCGGGGAGTGTGTGC 59.347 57.895 0.00 0.00 0.00 4.57
1053 1063 0.464735 TGGTTTTCGGGGAGTGTGTG 60.465 55.000 0.00 0.00 0.00 3.82
1054 1064 0.256464 TTGGTTTTCGGGGAGTGTGT 59.744 50.000 0.00 0.00 0.00 3.72
1055 1065 1.066454 GTTTGGTTTTCGGGGAGTGTG 59.934 52.381 0.00 0.00 0.00 3.82
1056 1066 1.395635 GTTTGGTTTTCGGGGAGTGT 58.604 50.000 0.00 0.00 0.00 3.55
1120 1130 2.920912 TCTCGTCGGGTTTGGGCT 60.921 61.111 0.00 0.00 0.00 5.19
1155 1165 1.005097 TCAAGGCTCCATCACAAGCAT 59.995 47.619 0.00 0.00 40.36 3.79
1172 1182 6.825213 CCATATCTCCAACAAGAACAGATCAA 59.175 38.462 0.00 0.00 0.00 2.57
1290 1300 2.785921 CGACTCGTCGTCCTCCAG 59.214 66.667 11.05 0.00 46.99 3.86
1327 1337 3.215568 CCTGTTTGCACACCGGCA 61.216 61.111 0.00 0.00 43.19 5.69
1336 1346 2.954753 CTCGACACCGCCTGTTTGC 61.955 63.158 0.00 0.00 31.03 3.68
1339 1349 3.222354 GACCTCGACACCGCCTGTT 62.222 63.158 0.00 0.00 31.03 3.16
1420 1430 6.591834 CGATCCTATCCAATCCATTCACTTAC 59.408 42.308 0.00 0.00 0.00 2.34
1447 1457 4.188462 TCTGTGTCGACAACAAGAACAAT 58.812 39.130 21.95 0.00 40.31 2.71
1464 1474 8.771766 CACATTTCACATCCTATCTAATCTGTG 58.228 37.037 0.00 0.00 36.27 3.66
1466 1476 7.443272 TGCACATTTCACATCCTATCTAATCTG 59.557 37.037 0.00 0.00 0.00 2.90
1501 1512 2.304470 TCGATGTCCAGTTGAAATCCCA 59.696 45.455 0.00 0.00 34.62 4.37
1502 1513 2.678336 GTCGATGTCCAGTTGAAATCCC 59.322 50.000 0.00 0.00 34.62 3.85
1503 1514 2.348666 CGTCGATGTCCAGTTGAAATCC 59.651 50.000 0.00 0.00 34.62 3.01
1686 1697 5.567534 CGACAACAACAAAATGGCAGTATAC 59.432 40.000 0.00 0.00 0.00 1.47
1694 1739 4.229096 CAGGATCGACAACAACAAAATGG 58.771 43.478 0.00 0.00 0.00 3.16
1703 1748 1.471287 CGACCTACAGGATCGACAACA 59.529 52.381 1.29 0.00 39.41 3.33
1704 1749 1.741706 TCGACCTACAGGATCGACAAC 59.258 52.381 14.74 0.00 40.27 3.32
1707 1752 3.814283 AGTTATCGACCTACAGGATCGAC 59.186 47.826 18.62 11.06 44.21 4.20
1709 1754 4.832590 AAGTTATCGACCTACAGGATCG 57.167 45.455 1.29 7.91 38.86 3.69
1717 1762 7.123098 TCACTGGAATTGTAAGTTATCGACCTA 59.877 37.037 0.00 0.00 0.00 3.08
1727 1772 9.480053 CAATTTCAAATCACTGGAATTGTAAGT 57.520 29.630 8.55 0.00 43.21 2.24
1737 1782 8.437742 GCTTTTCATACAATTTCAAATCACTGG 58.562 33.333 0.00 0.00 0.00 4.00
1747 1792 8.703336 GTTTCTCCAAGCTTTTCATACAATTTC 58.297 33.333 0.00 0.00 0.00 2.17
1808 1855 8.463607 ACCGTATCAATCAAACCGAAATTTTAT 58.536 29.630 0.00 0.00 0.00 1.40
1813 1863 5.646360 AGAACCGTATCAATCAAACCGAAAT 59.354 36.000 0.00 0.00 0.00 2.17
1819 1869 7.148407 ACAGATGAAGAACCGTATCAATCAAAC 60.148 37.037 0.00 0.00 0.00 2.93
1857 1907 9.009327 CACGATGTGGAAAAATTATCACAATAC 57.991 33.333 0.00 0.00 42.35 1.89
1874 2076 1.570813 ATATGCACGACACGATGTGG 58.429 50.000 1.64 0.00 37.94 4.17
1897 2099 0.940991 GGCAGCTTGCGACAAAAAGG 60.941 55.000 0.00 0.00 46.21 3.11
1998 2200 5.836821 TCTGACAGGTACATCACTGATAC 57.163 43.478 1.81 0.00 38.09 2.24
2038 2240 3.551846 GAATCGGTTGGAATGGGTACAT 58.448 45.455 0.00 0.00 39.54 2.29
2101 2303 2.365293 GTTCAACAGCCCAATTCCAACT 59.635 45.455 0.00 0.00 0.00 3.16
2128 2330 8.561738 AGATCACACCGAAATTATTTACTGTT 57.438 30.769 0.00 0.00 0.00 3.16
2158 2360 0.510359 CGCGCATAGCTCCTGAAATC 59.490 55.000 8.75 0.00 45.59 2.17
2228 2430 1.177401 GGAACTTGTGGGAGCATTCC 58.823 55.000 0.00 0.00 43.23 3.01
2258 2460 1.206849 TGCTGCACGTTGGATGAGATA 59.793 47.619 0.00 0.00 0.00 1.98
2329 2531 2.045045 CATCCGCTTTGGCTGGGA 60.045 61.111 0.00 0.00 37.80 4.37
2343 2545 2.843701 CCAATCCAGTGGAGTAGCATC 58.156 52.381 18.69 0.00 41.65 3.91
2406 2608 6.250951 CCACTCGTAGTCTTAGATTCGAAAAC 59.749 42.308 0.00 0.00 0.00 2.43
2434 2636 1.179814 AACTGCGTCCTCCTCTCGTT 61.180 55.000 0.00 0.00 0.00 3.85
2472 2674 0.782384 AATTCAGCGAACGACACGAC 59.218 50.000 0.00 0.00 0.00 4.34
2496 2698 0.457853 GTCACGCTCCGCTGAATGTA 60.458 55.000 0.00 0.00 0.00 2.29
2630 2845 1.361271 CTTATTGCCCGCCATGCTG 59.639 57.895 0.00 0.00 0.00 4.41
2667 2882 3.579709 TCTTGATCACGAAGCTCAGAAC 58.420 45.455 0.00 0.00 0.00 3.01
2669 2884 2.416566 GCTCTTGATCACGAAGCTCAGA 60.417 50.000 13.36 3.35 0.00 3.27
2685 2900 2.034221 GTTCGGGCCAAGGCTCTT 59.966 61.111 9.64 0.00 39.97 2.85
2887 3102 3.626996 CTGCATGCGGGGTTCCTGA 62.627 63.158 19.33 0.00 29.82 3.86
3084 3305 2.419198 GCCGGACATCTCAGCGAT 59.581 61.111 5.05 0.00 0.00 4.58
3089 3310 4.451150 GTGCCGCCGGACATCTCA 62.451 66.667 7.68 0.00 0.00 3.27
3147 3368 0.738412 CCACCGATGTACCGACCAAC 60.738 60.000 0.00 0.00 0.00 3.77
3149 3370 3.009192 GCCACCGATGTACCGACCA 62.009 63.158 0.00 0.00 0.00 4.02
3150 3371 2.202837 GCCACCGATGTACCGACC 60.203 66.667 0.00 0.00 0.00 4.79
3152 3373 2.363276 AGGCCACCGATGTACCGA 60.363 61.111 5.01 0.00 0.00 4.69
3260 3481 0.313987 TGTGACCGTCTACAGTGCTG 59.686 55.000 0.00 0.00 0.00 4.41
3269 3490 3.148084 CCACCCTTGTGACCGTCT 58.852 61.111 0.00 0.00 45.76 4.18
3276 3497 2.317609 CGAACTCGCCACCCTTGTG 61.318 63.158 0.00 0.00 42.39 3.33
3282 3503 2.804090 GTCGACGAACTCGCCACC 60.804 66.667 0.00 0.00 42.62 4.61
3298 3519 2.126734 CGTAAAGGTCGCCGACGT 60.127 61.111 11.60 9.15 41.18 4.34
3330 3551 3.181469 ACGTGTACTGTGACCAGAATGTT 60.181 43.478 0.00 0.00 41.50 2.71
3344 3565 1.364901 CGTGGTTGGGACGTGTACT 59.635 57.895 0.00 0.00 32.06 2.73
3345 3566 2.312436 GCGTGGTTGGGACGTGTAC 61.312 63.158 0.00 0.00 39.08 2.90
3423 3644 3.445450 TCACCTTCTATGCAGACAGTCTC 59.555 47.826 0.00 0.00 0.00 3.36
3481 3702 0.741221 GACTGACAACGGAGATGGGC 60.741 60.000 0.00 0.00 33.36 5.36
3491 3712 0.729816 GCTCGACCTCGACTGACAAC 60.730 60.000 0.00 0.00 44.22 3.32
3492 3713 1.579932 GCTCGACCTCGACTGACAA 59.420 57.895 0.00 0.00 44.22 3.18
3558 3779 4.452733 GCCTAGCTCCACGGCGTT 62.453 66.667 11.19 0.00 37.29 4.84
3565 3786 1.677966 ACGAAGTCGCCTAGCTCCA 60.678 57.895 0.00 0.00 44.43 3.86
3570 3791 2.152699 CGTGCACGAAGTCGCCTAG 61.153 63.158 34.93 0.00 41.61 3.02
3590 3811 1.772836 GCCCTTCCAAGATCATTGCT 58.227 50.000 0.00 0.00 0.00 3.91
3610 3831 2.029844 GACTCAAGCTCCACACGGC 61.030 63.158 0.00 0.00 0.00 5.68
3635 3856 2.629763 GCGTCCACCGACAACAAC 59.370 61.111 0.00 0.00 39.11 3.32
3689 3910 1.715019 TTGTCCCCAACCTGTCCTGG 61.715 60.000 0.00 0.00 0.00 4.45
3699 3920 1.706995 TACCGTTGCCTTGTCCCCAA 61.707 55.000 0.00 0.00 0.00 4.12
3831 4052 2.502093 CAACATACCGGGCGCCTA 59.498 61.111 28.56 11.88 0.00 3.93
3840 5697 1.462616 TGCAGCATGTCCAACATACC 58.537 50.000 0.00 0.00 36.53 2.73
3842 5699 1.941975 CGATGCAGCATGTCCAACATA 59.058 47.619 14.22 0.00 36.53 2.29
3846 5703 1.002257 ACCGATGCAGCATGTCCAA 60.002 52.632 14.22 0.00 39.31 3.53
3884 5741 3.444805 GTCAGCTCCTCGACGGCT 61.445 66.667 0.00 0.00 36.70 5.52
3942 5799 4.112341 GTCGTCCTGACCGACCGG 62.112 72.222 6.94 6.94 46.73 5.28
4052 5934 5.407691 CCATGACATCTTATGTTGAGATCCG 59.592 44.000 0.00 0.00 45.03 4.18
4059 5941 8.782339 TGCTATATCCATGACATCTTATGTTG 57.218 34.615 0.00 0.00 45.03 3.33
4062 5944 7.384387 CCGATGCTATATCCATGACATCTTATG 59.616 40.741 0.00 0.00 33.43 1.90
4073 5955 1.410517 CTCGGCCGATGCTATATCCAT 59.589 52.381 31.19 0.00 37.74 3.41
4080 5962 0.952280 CTAAGTCTCGGCCGATGCTA 59.048 55.000 31.19 16.14 37.74 3.49
4086 5968 0.802607 GTCTTGCTAAGTCTCGGCCG 60.803 60.000 22.12 22.12 0.00 6.13
4090 5972 9.784680 TTAGTTTTATAGTCTTGCTAAGTCTCG 57.215 33.333 0.00 0.00 32.72 4.04
4106 5988 6.448852 TGCATATCGGCGTCTTAGTTTTATA 58.551 36.000 6.85 0.00 36.28 0.98
4107 5989 5.294356 TGCATATCGGCGTCTTAGTTTTAT 58.706 37.500 6.85 0.00 36.28 1.40
4150 6032 0.618458 ACGGTATGTGGGTGAATGCT 59.382 50.000 0.00 0.00 0.00 3.79
4182 6064 1.035932 GCCCGTGTGAGCTACTCCTA 61.036 60.000 0.00 0.00 0.00 2.94
4186 6068 1.908793 ACAGCCCGTGTGAGCTACT 60.909 57.895 0.00 0.00 38.28 2.57
4240 6123 1.227823 TGGCACAAAGTAGCTGCGT 60.228 52.632 0.00 0.00 31.92 5.24
4252 6135 0.960861 TTTGTTGGACGTGTGGCACA 60.961 50.000 17.96 17.96 33.40 4.57
4271 6154 2.706190 GCAGGGTGGGATTGAGTAGTAT 59.294 50.000 0.00 0.00 0.00 2.12
4358 6241 0.307760 CCGGATGGCAACTAAATCGC 59.692 55.000 0.00 0.00 37.61 4.58
4384 6267 3.847467 GCGCGTACGTGATAACTACATCT 60.847 47.826 31.45 0.00 42.83 2.90
4442 6546 2.622942 CAACTAGGCAAACACACATGGT 59.377 45.455 0.00 0.00 0.00 3.55
4491 6595 1.745566 CGACAGTCGTACGTTGTTGA 58.254 50.000 25.26 3.09 34.72 3.18
4535 6650 0.745845 CCACACAGCCACCATCTAGC 60.746 60.000 0.00 0.00 0.00 3.42
4540 6655 3.873679 CTGCCCACACAGCCACCAT 62.874 63.158 0.00 0.00 0.00 3.55
4560 6675 1.344942 GCTGCGTGGACGAACTAGTG 61.345 60.000 2.73 0.00 43.02 2.74
4591 6706 2.125065 ACGCCCAACAACACGTGA 60.125 55.556 25.01 0.00 37.37 4.35
4593 6708 2.437002 ACACGCCCAACAACACGT 60.437 55.556 0.00 0.00 39.78 4.49
4598 6713 2.830827 CACCCACACGCCCAACAA 60.831 61.111 0.00 0.00 0.00 2.83
4614 6729 4.323485 GGTGTATGGACATTGAAGAGGTCA 60.323 45.833 0.00 0.00 40.75 4.02
4622 6737 0.908910 AGCCGGTGTATGGACATTGA 59.091 50.000 1.90 0.00 38.04 2.57
4626 6741 0.398696 ACAAAGCCGGTGTATGGACA 59.601 50.000 1.90 0.00 0.00 4.02
4628 6743 0.035820 GGACAAAGCCGGTGTATGGA 60.036 55.000 1.90 0.00 0.00 3.41
4632 6747 0.244450 CGTAGGACAAAGCCGGTGTA 59.756 55.000 1.90 0.00 0.00 2.90
4641 6756 0.935831 CGCGTGACACGTAGGACAAA 60.936 55.000 27.32 0.00 44.73 2.83
4654 6769 2.307309 CGAGGCAGTTTTCGCGTGA 61.307 57.895 5.77 0.00 0.00 4.35
4686 6801 9.206870 GGATTATCGTCCGGTTAAATTTACATA 57.793 33.333 0.00 0.00 0.00 2.29
4687 6802 7.716123 TGGATTATCGTCCGGTTAAATTTACAT 59.284 33.333 0.00 0.00 41.35 2.29
4690 6805 7.769970 AGTTGGATTATCGTCCGGTTAAATTTA 59.230 33.333 0.00 0.00 41.35 1.40
4694 6809 4.871557 CAGTTGGATTATCGTCCGGTTAAA 59.128 41.667 0.00 0.00 41.35 1.52
4700 6815 2.603110 CACACAGTTGGATTATCGTCCG 59.397 50.000 0.00 0.00 41.35 4.79
4714 6829 0.107897 TTGCAACTCGTCCACACAGT 60.108 50.000 0.00 0.00 0.00 3.55
4715 6830 1.069703 CATTGCAACTCGTCCACACAG 60.070 52.381 0.00 0.00 0.00 3.66
4716 6831 0.943673 CATTGCAACTCGTCCACACA 59.056 50.000 0.00 0.00 0.00 3.72
4723 6838 0.030638 GTGCCAACATTGCAACTCGT 59.969 50.000 0.00 0.00 41.06 4.18
4739 6854 1.136252 CACTAACGCTCACATGTGTGC 60.136 52.381 32.81 32.81 45.25 4.57
4745 6860 3.128349 ACGAAAACACTAACGCTCACAT 58.872 40.909 0.00 0.00 0.00 3.21
4777 6892 1.860950 CATGTCACCGGATAGCGAAAG 59.139 52.381 9.46 0.00 0.00 2.62
4778 6893 1.206132 ACATGTCACCGGATAGCGAAA 59.794 47.619 9.46 0.00 0.00 3.46
4779 6894 0.821517 ACATGTCACCGGATAGCGAA 59.178 50.000 9.46 0.00 0.00 4.70
4780 6895 0.821517 AACATGTCACCGGATAGCGA 59.178 50.000 9.46 0.00 0.00 4.93
4781 6896 2.502213 TAACATGTCACCGGATAGCG 57.498 50.000 9.46 0.00 0.00 4.26
4782 6897 4.389077 GCTATTAACATGTCACCGGATAGC 59.611 45.833 9.46 8.64 35.51 2.97
4783 6898 5.538118 TGCTATTAACATGTCACCGGATAG 58.462 41.667 9.46 1.39 0.00 2.08
4784 6899 5.538849 TGCTATTAACATGTCACCGGATA 57.461 39.130 9.46 0.00 0.00 2.59
4785 6900 4.415881 TGCTATTAACATGTCACCGGAT 57.584 40.909 9.46 0.00 0.00 4.18
4786 6901 3.897141 TGCTATTAACATGTCACCGGA 57.103 42.857 9.46 0.00 0.00 5.14
4787 6902 4.472691 CATGCTATTAACATGTCACCGG 57.527 45.455 0.00 0.00 40.04 5.28
4795 6910 7.042950 TGTTACGGTGTACATGCTATTAACAT 58.957 34.615 0.00 0.00 0.00 2.71
4796 6911 6.396450 TGTTACGGTGTACATGCTATTAACA 58.604 36.000 0.00 5.31 0.00 2.41
4797 6912 6.890663 TGTTACGGTGTACATGCTATTAAC 57.109 37.500 0.00 2.88 0.00 2.01
4798 6913 6.480651 CCATGTTACGGTGTACATGCTATTAA 59.519 38.462 22.43 0.00 46.44 1.40
4799 6914 5.986741 CCATGTTACGGTGTACATGCTATTA 59.013 40.000 22.43 0.00 46.44 0.98
4800 6915 4.814234 CCATGTTACGGTGTACATGCTATT 59.186 41.667 22.43 0.00 46.44 1.73
4801 6916 4.141801 ACCATGTTACGGTGTACATGCTAT 60.142 41.667 22.43 12.98 46.44 2.97
4802 6917 3.196039 ACCATGTTACGGTGTACATGCTA 59.804 43.478 22.43 0.00 46.44 3.49
4803 6918 2.027561 ACCATGTTACGGTGTACATGCT 60.028 45.455 22.43 12.95 46.44 3.79
4804 6919 2.350498 GACCATGTTACGGTGTACATGC 59.650 50.000 22.43 12.57 46.44 4.06
4806 6921 3.965379 TGACCATGTTACGGTGTACAT 57.035 42.857 0.00 5.27 36.69 2.29
4807 6922 3.965379 ATGACCATGTTACGGTGTACA 57.035 42.857 0.00 0.00 36.69 2.90
4808 6923 3.372822 CCAATGACCATGTTACGGTGTAC 59.627 47.826 0.00 0.00 36.69 2.90
4809 6924 3.601435 CCAATGACCATGTTACGGTGTA 58.399 45.455 0.00 0.00 36.69 2.90
4810 6925 2.432444 CCAATGACCATGTTACGGTGT 58.568 47.619 0.00 0.00 36.69 4.16
4811 6926 1.742831 CCCAATGACCATGTTACGGTG 59.257 52.381 0.00 0.00 36.69 4.94
4812 6927 1.353022 ACCCAATGACCATGTTACGGT 59.647 47.619 0.00 0.00 40.30 4.83
4813 6928 2.014128 GACCCAATGACCATGTTACGG 58.986 52.381 0.00 0.00 0.00 4.02
4814 6929 1.663643 CGACCCAATGACCATGTTACG 59.336 52.381 0.00 0.00 0.00 3.18
4815 6930 2.980568 TCGACCCAATGACCATGTTAC 58.019 47.619 0.00 0.00 0.00 2.50
4816 6931 3.704800 TTCGACCCAATGACCATGTTA 57.295 42.857 0.00 0.00 0.00 2.41
4817 6932 2.577606 TTCGACCCAATGACCATGTT 57.422 45.000 0.00 0.00 0.00 2.71
4818 6933 2.577606 TTTCGACCCAATGACCATGT 57.422 45.000 0.00 0.00 0.00 3.21
4819 6934 3.443329 TGATTTTCGACCCAATGACCATG 59.557 43.478 0.00 0.00 0.00 3.66
4820 6935 3.696045 TGATTTTCGACCCAATGACCAT 58.304 40.909 0.00 0.00 0.00 3.55
4821 6936 3.147553 TGATTTTCGACCCAATGACCA 57.852 42.857 0.00 0.00 0.00 4.02
4822 6937 4.718940 ATTGATTTTCGACCCAATGACC 57.281 40.909 0.00 0.00 0.00 4.02
4823 6938 5.273944 GCTATTGATTTTCGACCCAATGAC 58.726 41.667 9.60 1.51 32.28 3.06
4824 6939 4.338118 GGCTATTGATTTTCGACCCAATGA 59.662 41.667 9.60 0.00 32.28 2.57
4825 6940 4.499696 GGGCTATTGATTTTCGACCCAATG 60.500 45.833 9.60 3.86 36.07 2.82
4826 6941 3.636764 GGGCTATTGATTTTCGACCCAAT 59.363 43.478 0.00 0.00 36.07 3.16
4827 6942 3.020984 GGGCTATTGATTTTCGACCCAA 58.979 45.455 0.00 0.00 36.07 4.12
4828 6943 2.025793 TGGGCTATTGATTTTCGACCCA 60.026 45.455 0.00 0.00 43.73 4.51
4829 6944 2.618709 CTGGGCTATTGATTTTCGACCC 59.381 50.000 0.00 0.00 36.60 4.46
4830 6945 3.541632 TCTGGGCTATTGATTTTCGACC 58.458 45.455 0.00 0.00 0.00 4.79
4831 6946 4.816385 TGATCTGGGCTATTGATTTTCGAC 59.184 41.667 0.00 0.00 0.00 4.20
4832 6947 4.816385 GTGATCTGGGCTATTGATTTTCGA 59.184 41.667 0.00 0.00 0.00 3.71
4833 6948 4.576053 TGTGATCTGGGCTATTGATTTTCG 59.424 41.667 0.00 0.00 0.00 3.46
4834 6949 6.645790 ATGTGATCTGGGCTATTGATTTTC 57.354 37.500 0.00 0.00 0.00 2.29
4835 6950 7.230108 CAGTATGTGATCTGGGCTATTGATTTT 59.770 37.037 0.00 0.00 0.00 1.82
4836 6951 6.713903 CAGTATGTGATCTGGGCTATTGATTT 59.286 38.462 0.00 0.00 0.00 2.17
4837 6952 6.236409 CAGTATGTGATCTGGGCTATTGATT 58.764 40.000 0.00 0.00 0.00 2.57
4838 6953 5.802465 CAGTATGTGATCTGGGCTATTGAT 58.198 41.667 0.00 0.00 0.00 2.57
4839 6954 5.219343 CAGTATGTGATCTGGGCTATTGA 57.781 43.478 0.00 0.00 0.00 2.57
4855 6970 5.718649 ACAGCGTTTAATGCTACAGTATG 57.281 39.130 11.60 1.36 38.65 2.39
4856 6971 7.039882 ACTAACAGCGTTTAATGCTACAGTAT 58.960 34.615 11.60 1.18 38.65 2.12
4857 6972 6.392354 ACTAACAGCGTTTAATGCTACAGTA 58.608 36.000 11.60 1.65 38.65 2.74
4858 6973 5.235516 ACTAACAGCGTTTAATGCTACAGT 58.764 37.500 11.60 11.42 38.65 3.55
4859 6974 5.498700 CGACTAACAGCGTTTAATGCTACAG 60.499 44.000 11.60 10.85 38.65 2.74
4860 6975 4.325204 CGACTAACAGCGTTTAATGCTACA 59.675 41.667 11.60 0.00 38.65 2.74
4861 6976 4.325472 ACGACTAACAGCGTTTAATGCTAC 59.675 41.667 11.60 0.00 38.65 3.58
4862 6977 4.325204 CACGACTAACAGCGTTTAATGCTA 59.675 41.667 11.60 0.00 38.65 3.49
4863 6978 3.122948 CACGACTAACAGCGTTTAATGCT 59.877 43.478 5.76 5.76 42.06 3.79
4864 6979 3.120786 ACACGACTAACAGCGTTTAATGC 60.121 43.478 0.13 0.13 38.92 3.56
4865 6980 4.640805 ACACGACTAACAGCGTTTAATG 57.359 40.909 0.00 0.00 38.92 1.90
4866 6981 5.344128 CAGTACACGACTAACAGCGTTTAAT 59.656 40.000 0.00 0.00 38.92 1.40
4867 6982 4.676471 CAGTACACGACTAACAGCGTTTAA 59.324 41.667 0.00 0.00 38.92 1.52
4868 6983 4.221342 CAGTACACGACTAACAGCGTTTA 58.779 43.478 0.00 0.00 38.92 2.01
4869 6984 3.047796 CAGTACACGACTAACAGCGTTT 58.952 45.455 0.00 0.00 38.92 3.60
4870 6985 2.033801 ACAGTACACGACTAACAGCGTT 59.966 45.455 0.00 0.02 38.92 4.84
4871 6986 1.605710 ACAGTACACGACTAACAGCGT 59.394 47.619 0.00 0.00 42.11 5.07
4872 6987 2.327081 ACAGTACACGACTAACAGCG 57.673 50.000 0.00 0.00 35.64 5.18
4873 6988 3.183775 CCAAACAGTACACGACTAACAGC 59.816 47.826 0.00 0.00 35.64 4.40
4874 6989 3.183775 GCCAAACAGTACACGACTAACAG 59.816 47.826 0.00 0.00 35.64 3.16
4875 6990 3.125316 GCCAAACAGTACACGACTAACA 58.875 45.455 0.00 0.00 35.64 2.41
4876 6991 3.125316 TGCCAAACAGTACACGACTAAC 58.875 45.455 0.00 0.00 35.64 2.34
4877 6992 3.386486 CTGCCAAACAGTACACGACTAA 58.614 45.455 0.00 0.00 41.86 2.24
4878 6993 2.288579 CCTGCCAAACAGTACACGACTA 60.289 50.000 0.00 0.00 45.68 2.59
4879 6994 1.540363 CCTGCCAAACAGTACACGACT 60.540 52.381 0.00 0.00 45.68 4.18
4880 6995 0.865769 CCTGCCAAACAGTACACGAC 59.134 55.000 0.00 0.00 45.68 4.34
4881 6996 0.250124 CCCTGCCAAACAGTACACGA 60.250 55.000 0.00 0.00 45.68 4.35
4882 6997 0.250124 TCCCTGCCAAACAGTACACG 60.250 55.000 0.00 0.00 45.68 4.49
4883 6998 1.812571 CATCCCTGCCAAACAGTACAC 59.187 52.381 0.00 0.00 45.68 2.90
4884 6999 1.423541 ACATCCCTGCCAAACAGTACA 59.576 47.619 0.00 0.00 45.68 2.90
4885 7000 2.084546 GACATCCCTGCCAAACAGTAC 58.915 52.381 0.00 0.00 45.68 2.73
4886 7001 1.004277 GGACATCCCTGCCAAACAGTA 59.996 52.381 0.00 0.00 45.68 2.74
4887 7002 0.251341 GGACATCCCTGCCAAACAGT 60.251 55.000 0.00 0.00 45.68 3.55
4888 7003 0.038744 AGGACATCCCTGCCAAACAG 59.961 55.000 0.00 0.00 45.61 3.16
4889 7004 2.163454 AGGACATCCCTGCCAAACA 58.837 52.632 0.00 0.00 45.61 2.83
4898 7013 0.597637 CGCGTCACATAGGACATCCC 60.598 60.000 0.00 0.00 37.66 3.85
4899 7014 0.102481 ACGCGTCACATAGGACATCC 59.898 55.000 5.58 0.00 37.66 3.51
4900 7015 1.852895 GAACGCGTCACATAGGACATC 59.147 52.381 14.44 0.00 37.66 3.06
4901 7016 1.476891 AGAACGCGTCACATAGGACAT 59.523 47.619 14.44 0.00 37.66 3.06
4902 7017 0.885879 AGAACGCGTCACATAGGACA 59.114 50.000 14.44 0.00 37.66 4.02
4903 7018 1.269166 CAGAACGCGTCACATAGGAC 58.731 55.000 14.44 0.00 34.42 3.85
4904 7019 0.457853 GCAGAACGCGTCACATAGGA 60.458 55.000 14.44 0.00 0.00 2.94
4905 7020 0.735978 TGCAGAACGCGTCACATAGG 60.736 55.000 14.44 0.00 46.97 2.57
4906 7021 1.280982 ATGCAGAACGCGTCACATAG 58.719 50.000 14.44 5.77 46.97 2.23
4907 7022 3.434258 ATGCAGAACGCGTCACATA 57.566 47.368 14.44 0.00 46.97 2.29
4908 7023 4.284123 ATGCAGAACGCGTCACAT 57.716 50.000 14.44 11.30 46.97 3.21
4913 7028 1.086067 CATCCTGATGCAGAACGCGT 61.086 55.000 5.58 5.58 46.97 6.01
4914 7029 1.640069 CATCCTGATGCAGAACGCG 59.360 57.895 3.53 3.53 46.97 6.01
4923 7038 4.928615 GCTAGTAGCTTTAGCATCCTGATG 59.071 45.833 15.16 2.72 45.16 3.07
4924 7039 4.020662 GGCTAGTAGCTTTAGCATCCTGAT 60.021 45.833 21.20 0.00 44.15 2.90
4925 7040 3.322254 GGCTAGTAGCTTTAGCATCCTGA 59.678 47.826 21.20 0.00 44.15 3.86
4926 7041 3.070159 TGGCTAGTAGCTTTAGCATCCTG 59.930 47.826 21.20 0.00 44.15 3.86
4927 7042 3.309296 TGGCTAGTAGCTTTAGCATCCT 58.691 45.455 21.20 0.00 44.15 3.24
4928 7043 3.070302 ACTGGCTAGTAGCTTTAGCATCC 59.930 47.826 21.20 12.13 44.15 3.51
4929 7044 4.054671 CACTGGCTAGTAGCTTTAGCATC 58.945 47.826 21.20 12.64 44.15 3.91
4930 7045 3.742640 GCACTGGCTAGTAGCTTTAGCAT 60.743 47.826 21.20 11.20 44.15 3.79
4931 7046 2.418746 GCACTGGCTAGTAGCTTTAGCA 60.419 50.000 21.20 9.61 44.15 3.49
4932 7047 2.205911 GCACTGGCTAGTAGCTTTAGC 58.794 52.381 21.20 17.23 41.99 3.09
4933 7048 2.099263 TCGCACTGGCTAGTAGCTTTAG 59.901 50.000 21.20 17.74 41.99 1.85
4934 7049 2.097036 TCGCACTGGCTAGTAGCTTTA 58.903 47.619 21.20 7.91 41.99 1.85
4935 7050 0.895530 TCGCACTGGCTAGTAGCTTT 59.104 50.000 21.20 3.70 41.99 3.51
4936 7051 0.173708 GTCGCACTGGCTAGTAGCTT 59.826 55.000 21.20 4.05 41.99 3.74
4937 7052 0.965866 TGTCGCACTGGCTAGTAGCT 60.966 55.000 21.20 0.00 41.99 3.32
4938 7053 0.802607 GTGTCGCACTGGCTAGTAGC 60.803 60.000 14.09 14.09 41.46 3.58
4939 7054 0.523546 CGTGTCGCACTGGCTAGTAG 60.524 60.000 0.95 0.03 38.10 2.57
4940 7055 1.504900 CGTGTCGCACTGGCTAGTA 59.495 57.895 0.95 0.00 38.10 1.82
4941 7056 2.258591 CGTGTCGCACTGGCTAGT 59.741 61.111 0.00 0.00 38.10 2.57
4942 7057 2.507102 CCGTGTCGCACTGGCTAG 60.507 66.667 0.00 0.00 38.10 3.42
4943 7058 3.277211 GACCGTGTCGCACTGGCTA 62.277 63.158 15.06 0.00 38.10 3.93
4944 7059 4.664677 GACCGTGTCGCACTGGCT 62.665 66.667 15.06 7.53 38.10 4.75
4945 7060 4.961511 TGACCGTGTCGCACTGGC 62.962 66.667 15.06 9.33 34.95 4.85
4946 7061 2.971428 AAGTGACCGTGTCGCACTGG 62.971 60.000 16.42 14.19 44.42 4.00
4947 7062 1.151777 AAAGTGACCGTGTCGCACTG 61.152 55.000 16.42 4.62 44.42 3.66
4948 7063 0.461339 AAAAGTGACCGTGTCGCACT 60.461 50.000 16.42 0.00 44.42 4.40
4949 7064 0.315869 CAAAAGTGACCGTGTCGCAC 60.316 55.000 16.42 0.00 44.42 5.34
4950 7065 0.741574 ACAAAAGTGACCGTGTCGCA 60.742 50.000 16.42 0.00 44.42 5.10
4951 7066 0.315869 CACAAAAGTGACCGTGTCGC 60.316 55.000 8.89 8.89 42.60 5.19
4952 7067 1.003851 ACACAAAAGTGACCGTGTCG 58.996 50.000 2.22 0.00 38.13 4.35
4953 7068 2.931325 TGTACACAAAAGTGACCGTGTC 59.069 45.455 2.22 0.00 41.49 3.67
4954 7069 2.975266 TGTACACAAAAGTGACCGTGT 58.025 42.857 2.22 0.00 44.40 4.49
4955 7070 5.856126 ATATGTACACAAAAGTGACCGTG 57.144 39.130 0.00 0.00 35.48 4.94
4956 7071 6.930164 TGTTATATGTACACAAAAGTGACCGT 59.070 34.615 0.00 0.00 0.00 4.83
4957 7072 7.354025 TGTTATATGTACACAAAAGTGACCG 57.646 36.000 0.00 0.00 0.00 4.79
4958 7073 7.742963 CGTTGTTATATGTACACAAAAGTGACC 59.257 37.037 0.00 0.00 32.32 4.02
4959 7074 7.267600 GCGTTGTTATATGTACACAAAAGTGAC 59.732 37.037 0.00 0.00 32.32 3.67
4960 7075 7.292292 GCGTTGTTATATGTACACAAAAGTGA 58.708 34.615 0.00 0.00 32.32 3.41
4961 7076 6.245503 CGCGTTGTTATATGTACACAAAAGTG 59.754 38.462 0.00 0.00 32.32 3.16
4962 7077 6.145858 TCGCGTTGTTATATGTACACAAAAGT 59.854 34.615 5.77 0.00 32.32 2.66
4963 7078 6.460452 GTCGCGTTGTTATATGTACACAAAAG 59.540 38.462 5.77 0.00 32.32 2.27
4964 7079 6.145858 AGTCGCGTTGTTATATGTACACAAAA 59.854 34.615 5.77 0.00 32.32 2.44
4965 7080 5.634439 AGTCGCGTTGTTATATGTACACAAA 59.366 36.000 5.77 0.00 32.32 2.83
4966 7081 5.162794 AGTCGCGTTGTTATATGTACACAA 58.837 37.500 5.77 0.00 0.00 3.33
4967 7082 4.735985 AGTCGCGTTGTTATATGTACACA 58.264 39.130 5.77 0.00 0.00 3.72
4968 7083 5.967674 ACTAGTCGCGTTGTTATATGTACAC 59.032 40.000 5.77 0.00 0.00 2.90
4969 7084 6.122850 ACTAGTCGCGTTGTTATATGTACA 57.877 37.500 5.77 0.00 0.00 2.90
4970 7085 8.547091 TTTACTAGTCGCGTTGTTATATGTAC 57.453 34.615 5.77 0.00 0.00 2.90
4971 7086 8.611757 TCTTTACTAGTCGCGTTGTTATATGTA 58.388 33.333 5.77 0.00 0.00 2.29
4972 7087 7.475015 TCTTTACTAGTCGCGTTGTTATATGT 58.525 34.615 5.77 0.00 0.00 2.29
4973 7088 7.903452 TCTTTACTAGTCGCGTTGTTATATG 57.097 36.000 5.77 0.00 0.00 1.78
4974 7089 8.801913 GTTTCTTTACTAGTCGCGTTGTTATAT 58.198 33.333 5.77 0.00 0.00 0.86
4975 7090 7.807433 TGTTTCTTTACTAGTCGCGTTGTTATA 59.193 33.333 5.77 0.00 0.00 0.98
4976 7091 6.642131 TGTTTCTTTACTAGTCGCGTTGTTAT 59.358 34.615 5.77 0.00 0.00 1.89
4977 7092 5.976534 TGTTTCTTTACTAGTCGCGTTGTTA 59.023 36.000 5.77 0.00 0.00 2.41
4978 7093 4.805192 TGTTTCTTTACTAGTCGCGTTGTT 59.195 37.500 5.77 0.00 0.00 2.83
4979 7094 4.362279 TGTTTCTTTACTAGTCGCGTTGT 58.638 39.130 5.77 3.66 0.00 3.32
4980 7095 4.959631 TGTTTCTTTACTAGTCGCGTTG 57.040 40.909 5.77 0.00 0.00 4.10
4981 7096 4.084693 GCTTGTTTCTTTACTAGTCGCGTT 60.085 41.667 5.77 0.00 0.00 4.84
4982 7097 3.427863 GCTTGTTTCTTTACTAGTCGCGT 59.572 43.478 5.77 0.00 0.00 6.01
4983 7098 3.673809 AGCTTGTTTCTTTACTAGTCGCG 59.326 43.478 0.00 0.00 0.00 5.87
4984 7099 4.666908 GCAGCTTGTTTCTTTACTAGTCGC 60.667 45.833 0.00 0.00 0.00 5.19
4985 7100 4.447724 TGCAGCTTGTTTCTTTACTAGTCG 59.552 41.667 0.00 0.00 0.00 4.18
4986 7101 5.615764 GCTGCAGCTTGTTTCTTTACTAGTC 60.616 44.000 31.33 0.00 38.21 2.59
4987 7102 4.214332 GCTGCAGCTTGTTTCTTTACTAGT 59.786 41.667 31.33 0.00 38.21 2.57
4988 7103 4.667668 CGCTGCAGCTTGTTTCTTTACTAG 60.668 45.833 34.22 10.67 39.32 2.57
4989 7104 3.186409 CGCTGCAGCTTGTTTCTTTACTA 59.814 43.478 34.22 0.00 39.32 1.82
4990 7105 2.031682 CGCTGCAGCTTGTTTCTTTACT 60.032 45.455 34.22 0.00 39.32 2.24
4991 7106 2.310577 CGCTGCAGCTTGTTTCTTTAC 58.689 47.619 34.22 3.10 39.32 2.01
4992 7107 1.266718 CCGCTGCAGCTTGTTTCTTTA 59.733 47.619 34.22 0.00 39.32 1.85
4993 7108 0.031178 CCGCTGCAGCTTGTTTCTTT 59.969 50.000 34.22 0.00 39.32 2.52
4994 7109 1.656441 CCGCTGCAGCTTGTTTCTT 59.344 52.632 34.22 0.00 39.32 2.52
4995 7110 2.912624 GCCGCTGCAGCTTGTTTCT 61.913 57.895 34.22 0.00 39.32 2.52
4996 7111 2.429739 GCCGCTGCAGCTTGTTTC 60.430 61.111 34.22 13.77 39.32 2.78
4997 7112 3.218470 TGCCGCTGCAGCTTGTTT 61.218 55.556 34.22 0.00 44.23 2.83
5006 7121 2.346099 TCTTTATGTTTTGCCGCTGC 57.654 45.000 0.00 0.00 38.26 5.25
5007 7122 3.637432 TGTTCTTTATGTTTTGCCGCTG 58.363 40.909 0.00 0.00 0.00 5.18
5008 7123 4.048504 GTTGTTCTTTATGTTTTGCCGCT 58.951 39.130 0.00 0.00 0.00 5.52
5009 7124 4.048504 AGTTGTTCTTTATGTTTTGCCGC 58.951 39.130 0.00 0.00 0.00 6.53
5010 7125 4.679654 GGAGTTGTTCTTTATGTTTTGCCG 59.320 41.667 0.00 0.00 0.00 5.69
5011 7126 4.988540 GGGAGTTGTTCTTTATGTTTTGCC 59.011 41.667 0.00 0.00 0.00 4.52
5012 7127 5.596845 TGGGAGTTGTTCTTTATGTTTTGC 58.403 37.500 0.00 0.00 0.00 3.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.