Multiple sequence alignment - TraesCS1A01G146500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G146500 chr1A 100.000 3350 0 0 1 3350 252771215 252774564 0.000000e+00 6187.0
1 TraesCS1A01G146500 chr1A 89.793 823 60 10 7 805 278213859 278213037 0.000000e+00 1033.0
2 TraesCS1A01G146500 chr1A 90.672 268 21 2 933 1196 252734168 252734435 1.480000e-93 353.0
3 TraesCS1A01G146500 chr1A 97.196 107 3 0 2918 3024 497191263 497191369 7.380000e-42 182.0
4 TraesCS1A01G146500 chr1A 85.345 116 17 0 2914 3029 24325544 24325429 1.630000e-23 121.0
5 TraesCS1A01G146500 chr1B 94.332 1870 84 8 844 2692 288172025 288170157 0.000000e+00 2846.0
6 TraesCS1A01G146500 chr6A 90.070 856 61 3 4 835 178089186 178088331 0.000000e+00 1088.0
7 TraesCS1A01G146500 chr6A 89.928 139 14 0 2918 3056 603364176 603364314 2.660000e-41 180.0
8 TraesCS1A01G146500 chr4D 89.848 857 59 7 4 835 276859240 276858387 0.000000e+00 1075.0
9 TraesCS1A01G146500 chr4D 87.456 861 78 7 1 832 170246551 170247410 0.000000e+00 965.0
10 TraesCS1A01G146500 chr4D 86.962 859 83 11 4 834 370630724 370629867 0.000000e+00 939.0
11 TraesCS1A01G146500 chr5D 87.967 856 76 11 4 835 383593320 383592468 0.000000e+00 985.0
12 TraesCS1A01G146500 chr5D 87.182 866 76 12 1 833 188384751 188385614 0.000000e+00 952.0
13 TraesCS1A01G146500 chr2D 87.872 841 74 5 20 833 38130264 38129425 0.000000e+00 963.0
14 TraesCS1A01G146500 chr7A 89.921 764 48 3 7 741 206722983 206722220 0.000000e+00 957.0
15 TraesCS1A01G146500 chr3D 87.224 861 76 11 4 833 554203683 554202826 0.000000e+00 950.0
16 TraesCS1A01G146500 chr3D 82.775 865 107 20 4 832 116343145 116342287 0.000000e+00 734.0
17 TraesCS1A01G146500 chr3D 90.541 148 14 0 2915 3062 301993157 301993304 2.640000e-46 196.0
18 TraesCS1A01G146500 chr3D 81.081 148 25 3 2915 3060 48800357 48800503 7.600000e-22 115.0
19 TraesCS1A01G146500 chr1D 84.954 864 79 17 1 832 110921071 110921915 0.000000e+00 828.0
20 TraesCS1A01G146500 chr1D 91.818 110 9 0 2915 3024 475488050 475488159 1.610000e-33 154.0
21 TraesCS1A01G146500 chr1D 92.500 40 3 0 2816 2855 18139740 18139779 1.300000e-04 58.4
22 TraesCS1A01G146500 chr6D 81.713 864 112 26 1 834 72401917 72402764 0.000000e+00 678.0
23 TraesCS1A01G146500 chr2B 77.394 898 129 37 7 842 722515389 722514504 1.820000e-127 466.0
24 TraesCS1A01G146500 chr3B 77.248 901 134 35 4 844 166540576 166539687 2.350000e-126 462.0
25 TraesCS1A01G146500 chr3B 87.943 141 16 1 2918 3058 697130935 697131074 7.440000e-37 165.0
26 TraesCS1A01G146500 chr3B 94.444 36 2 0 2816 2851 123372153 123372188 4.670000e-04 56.5
27 TraesCS1A01G146500 chr5B 74.776 559 97 26 1175 1719 118591492 118592020 9.420000e-51 211.0
28 TraesCS1A01G146500 chr6B 86.607 112 15 0 2918 3029 551962795 551962906 1.260000e-24 124.0
29 TraesCS1A01G146500 chr3A 80.272 147 26 2 2914 3058 41614474 41614329 1.270000e-19 108.0
30 TraesCS1A01G146500 chr5A 83.696 92 15 0 1626 1717 416184358 416184449 1.660000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G146500 chr1A 252771215 252774564 3349 False 6187 6187 100.000 1 3350 1 chr1A.!!$F2 3349
1 TraesCS1A01G146500 chr1A 278213037 278213859 822 True 1033 1033 89.793 7 805 1 chr1A.!!$R2 798
2 TraesCS1A01G146500 chr1B 288170157 288172025 1868 True 2846 2846 94.332 844 2692 1 chr1B.!!$R1 1848
3 TraesCS1A01G146500 chr6A 178088331 178089186 855 True 1088 1088 90.070 4 835 1 chr6A.!!$R1 831
4 TraesCS1A01G146500 chr4D 276858387 276859240 853 True 1075 1075 89.848 4 835 1 chr4D.!!$R1 831
5 TraesCS1A01G146500 chr4D 170246551 170247410 859 False 965 965 87.456 1 832 1 chr4D.!!$F1 831
6 TraesCS1A01G146500 chr4D 370629867 370630724 857 True 939 939 86.962 4 834 1 chr4D.!!$R2 830
7 TraesCS1A01G146500 chr5D 383592468 383593320 852 True 985 985 87.967 4 835 1 chr5D.!!$R1 831
8 TraesCS1A01G146500 chr5D 188384751 188385614 863 False 952 952 87.182 1 833 1 chr5D.!!$F1 832
9 TraesCS1A01G146500 chr2D 38129425 38130264 839 True 963 963 87.872 20 833 1 chr2D.!!$R1 813
10 TraesCS1A01G146500 chr7A 206722220 206722983 763 True 957 957 89.921 7 741 1 chr7A.!!$R1 734
11 TraesCS1A01G146500 chr3D 554202826 554203683 857 True 950 950 87.224 4 833 1 chr3D.!!$R2 829
12 TraesCS1A01G146500 chr3D 116342287 116343145 858 True 734 734 82.775 4 832 1 chr3D.!!$R1 828
13 TraesCS1A01G146500 chr1D 110921071 110921915 844 False 828 828 84.954 1 832 1 chr1D.!!$F2 831
14 TraesCS1A01G146500 chr6D 72401917 72402764 847 False 678 678 81.713 1 834 1 chr6D.!!$F1 833
15 TraesCS1A01G146500 chr2B 722514504 722515389 885 True 466 466 77.394 7 842 1 chr2B.!!$R1 835
16 TraesCS1A01G146500 chr3B 166539687 166540576 889 True 462 462 77.248 4 844 1 chr3B.!!$R1 840
17 TraesCS1A01G146500 chr5B 118591492 118592020 528 False 211 211 74.776 1175 1719 1 chr5B.!!$F1 544

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
257 290 0.035317 TCAGAACCAACTGCTCGCAT 59.965 50.0 0.00 0.0 37.75 4.73 F
355 390 0.109039 ACACACAAAAACCGTGGTGC 60.109 50.0 0.00 0.0 38.74 5.01 F
964 1061 0.315251 CCTGCGCCTGATCGATAAGA 59.685 55.0 11.71 0.0 0.00 2.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1119 1222 0.179134 CGATGTCGGTTGGGAGAGAC 60.179 60.0 0.0 0.0 35.37 3.36 R
1859 1974 0.327924 TGCCCTGTCATCGTTTCCAT 59.672 50.0 0.0 0.0 0.00 3.41 R
2903 3025 0.320683 GCGGCCCAAGCATTCTTTTT 60.321 50.0 0.0 0.0 42.56 1.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
92 93 3.631686 TGCCATCTATCATTTTGAACCGG 59.368 43.478 0.00 0.00 0.00 5.28
164 188 7.333423 GTGGCAACTAATGTTAGATACAAGTGA 59.667 37.037 6.78 0.00 37.73 3.41
210 243 3.074390 TGCCAAATTCCTCCTTTCTCTCA 59.926 43.478 0.00 0.00 0.00 3.27
211 244 4.264083 TGCCAAATTCCTCCTTTCTCTCAT 60.264 41.667 0.00 0.00 0.00 2.90
257 290 0.035317 TCAGAACCAACTGCTCGCAT 59.965 50.000 0.00 0.00 37.75 4.73
355 390 0.109039 ACACACAAAAACCGTGGTGC 60.109 50.000 0.00 0.00 38.74 5.01
433 490 3.795688 ATTTCTGGACAGAAGAAGGCA 57.204 42.857 13.77 0.34 46.80 4.75
445 502 6.773638 ACAGAAGAAGGCAGAGAAATAGAAA 58.226 36.000 0.00 0.00 0.00 2.52
516 603 1.758592 GGGTGTTGGCTAGTGGTGA 59.241 57.895 0.00 0.00 0.00 4.02
634 724 1.338136 TGGGGATCGAAAGGAGGCTC 61.338 60.000 5.78 5.78 0.00 4.70
799 891 4.323477 GTGCGGCACTACCACCCA 62.323 66.667 25.08 0.00 39.03 4.51
805 897 1.134220 CGGCACTACCACCCAATATGT 60.134 52.381 0.00 0.00 39.03 2.29
812 904 0.732571 CCACCCAATATGTCACACGC 59.267 55.000 0.00 0.00 0.00 5.34
835 927 1.206523 GCAGTTATCGGCGTCCTTAC 58.793 55.000 6.85 0.00 0.00 2.34
859 951 7.893658 ACGTATATGATCTTTCCCTTATTCGT 58.106 34.615 0.00 0.00 0.00 3.85
868 962 9.902196 GATCTTTCCCTTATTCGTAAACAAAAA 57.098 29.630 0.00 0.00 0.00 1.94
882 976 8.130469 TCGTAAACAAAAATCTCCCTAAAACAC 58.870 33.333 0.00 0.00 0.00 3.32
942 1036 3.488553 CCTCTTGTCCCGTTTTGTTGTTC 60.489 47.826 0.00 0.00 0.00 3.18
943 1037 3.082548 TCTTGTCCCGTTTTGTTGTTCA 58.917 40.909 0.00 0.00 0.00 3.18
964 1061 0.315251 CCTGCGCCTGATCGATAAGA 59.685 55.000 11.71 0.00 0.00 2.10
986 1083 2.112297 TGCGGGTGTGGGAGAAAC 59.888 61.111 0.00 0.00 0.00 2.78
1015 1112 2.652095 GGAATGTGTCCGTCCGGGA 61.652 63.158 0.00 0.00 44.68 5.14
1139 1242 0.611062 TCTCTCCCAACCGACATCGT 60.611 55.000 0.00 0.00 37.74 3.73
1242 1348 2.285368 TCCGACCTGGGCATCCTT 60.285 61.111 0.00 0.00 38.76 3.36
1257 1363 0.850100 TCCTTGCCCTGAGAAAACCA 59.150 50.000 0.00 0.00 0.00 3.67
1344 1456 3.130633 CGAGATCACCTTGTTCAACACA 58.869 45.455 0.00 0.00 0.00 3.72
1352 1464 1.299562 TTGTTCAACACACGCACGGT 61.300 50.000 0.00 0.00 33.98 4.83
1402 1514 3.936203 GGTGCCACAGGGTCGTCA 61.936 66.667 0.00 0.00 36.17 4.35
1482 1594 3.636231 CCCTTCACCCTCGCCACA 61.636 66.667 0.00 0.00 0.00 4.17
1530 1642 3.068590 CCTTCCGCAATGCAATTAAGGAT 59.931 43.478 15.45 0.00 39.63 3.24
1639 1754 1.227943 GTGCTCTGGACACAGCCAA 60.228 57.895 0.00 0.00 44.54 4.52
1644 1759 3.535629 CTGGACACAGCCAAGCCGA 62.536 63.158 0.00 0.00 38.01 5.54
1650 1765 3.123620 CAGCCAAGCCGACTGAGC 61.124 66.667 0.00 0.00 33.10 4.26
1784 1899 3.744214 CGCAAAATCTCCATGGCCTACTA 60.744 47.826 6.96 0.00 0.00 1.82
1953 2068 1.324740 TGCCCATCTGCAATCTTGGC 61.325 55.000 6.91 6.91 38.56 4.52
1976 2091 1.673920 TCGGGCTTTGTTTCTCAACAC 59.326 47.619 0.00 0.00 42.87 3.32
1980 2095 3.319122 GGGCTTTGTTTCTCAACACTGAT 59.681 43.478 0.00 0.00 42.87 2.90
2021 2136 2.367894 CCATGAGCTTGCCATCTCTCTA 59.632 50.000 0.00 0.00 0.00 2.43
2022 2137 3.008157 CCATGAGCTTGCCATCTCTCTAT 59.992 47.826 0.00 0.00 0.00 1.98
2035 2150 5.866633 CCATCTCTCTATAGCAATTCGGTTC 59.133 44.000 0.00 0.00 0.00 3.62
2044 2159 4.691860 AGCAATTCGGTTCATTTCTCTG 57.308 40.909 0.00 0.00 0.00 3.35
2070 2185 4.119363 AGCCCCGCTGTGATGCAT 62.119 61.111 0.00 0.00 37.57 3.96
2084 2199 2.200067 GATGCATTCTCTGTCGAGTGG 58.800 52.381 0.00 0.00 38.45 4.00
2085 2200 0.247460 TGCATTCTCTGTCGAGTGGG 59.753 55.000 0.00 0.00 38.45 4.61
2100 2215 2.214216 TGGGTTGTCCGAGGACCTG 61.214 63.158 18.57 0.00 43.97 4.00
2134 2249 2.543861 CGGATACACGACATGAAGGAGG 60.544 54.545 0.00 0.00 35.47 4.30
2170 2285 0.109597 GCGACCTTTCACCATTGCTG 60.110 55.000 0.00 0.00 0.00 4.41
2236 2351 3.375299 GCTCATGTTTCATGAGTACCACC 59.625 47.826 28.47 14.88 45.38 4.61
2254 2369 4.039245 ACCACCATATACCAGACTCATTCG 59.961 45.833 0.00 0.00 0.00 3.34
2266 2381 5.105752 CAGACTCATTCGAGGAACTAAAGG 58.894 45.833 0.00 0.00 44.17 3.11
2283 2398 7.833285 ACTAAAGGAGAAAATAAAGGCACAA 57.167 32.000 0.00 0.00 0.00 3.33
2336 2457 2.695147 CAGGAGGTTCAAAGGCAAAACT 59.305 45.455 0.00 0.00 0.00 2.66
2463 2584 0.834612 CCCATGTTTCTACGGGCCTA 59.165 55.000 0.84 0.00 0.00 3.93
2470 2591 5.881923 TGTTTCTACGGGCCTATTTATCT 57.118 39.130 0.84 0.00 0.00 1.98
2474 2595 6.681729 TTCTACGGGCCTATTTATCTCAAT 57.318 37.500 0.84 0.00 0.00 2.57
2475 2596 6.037786 TCTACGGGCCTATTTATCTCAATG 57.962 41.667 0.84 0.00 0.00 2.82
2477 2598 5.048846 ACGGGCCTATTTATCTCAATGTT 57.951 39.130 0.84 0.00 0.00 2.71
2500 2621 6.124088 TGTCTTGCTCTTTCAAAAACTCTC 57.876 37.500 0.00 0.00 0.00 3.20
2502 2623 7.047891 TGTCTTGCTCTTTCAAAAACTCTCTA 58.952 34.615 0.00 0.00 0.00 2.43
2528 2649 6.595682 TCTCTTGAAGAAGTGGAGTCATTTT 58.404 36.000 0.00 0.00 0.00 1.82
2537 2658 5.171339 AGTGGAGTCATTTTAGCAGACAT 57.829 39.130 0.00 0.00 34.80 3.06
2639 2760 0.395312 ATGTCCACCGTTTCGTCCTT 59.605 50.000 0.00 0.00 0.00 3.36
2653 2774 3.017442 TCGTCCTTAGATCACCACTCTG 58.983 50.000 0.00 0.00 0.00 3.35
2673 2795 6.126768 ACTCTGTTTGCCTCAATAGCCTTATA 60.127 38.462 0.00 0.00 0.00 0.98
2692 2814 8.675504 GCCTTATAGAGTTTGATATAGACGCTA 58.324 37.037 0.00 0.00 31.86 4.26
2698 2820 8.638629 AGAGTTTGATATAGACGCTATTACCT 57.361 34.615 4.99 0.00 0.00 3.08
2699 2821 9.080097 AGAGTTTGATATAGACGCTATTACCTT 57.920 33.333 4.99 0.00 0.00 3.50
2700 2822 9.694137 GAGTTTGATATAGACGCTATTACCTTT 57.306 33.333 4.99 0.00 0.00 3.11
2701 2823 9.477484 AGTTTGATATAGACGCTATTACCTTTG 57.523 33.333 4.99 0.00 0.00 2.77
2702 2824 7.884816 TTGATATAGACGCTATTACCTTTGC 57.115 36.000 4.99 0.00 0.00 3.68
2703 2825 7.228314 TGATATAGACGCTATTACCTTTGCT 57.772 36.000 4.99 0.00 0.00 3.91
2704 2826 7.667557 TGATATAGACGCTATTACCTTTGCTT 58.332 34.615 4.99 0.00 0.00 3.91
2705 2827 7.813148 TGATATAGACGCTATTACCTTTGCTTC 59.187 37.037 4.99 0.00 0.00 3.86
2706 2828 4.202245 AGACGCTATTACCTTTGCTTCA 57.798 40.909 0.00 0.00 0.00 3.02
2707 2829 4.575885 AGACGCTATTACCTTTGCTTCAA 58.424 39.130 0.00 0.00 0.00 2.69
2708 2830 5.001232 AGACGCTATTACCTTTGCTTCAAA 58.999 37.500 0.00 0.00 0.00 2.69
2709 2831 5.472137 AGACGCTATTACCTTTGCTTCAAAA 59.528 36.000 0.00 0.00 32.75 2.44
2710 2832 6.151144 AGACGCTATTACCTTTGCTTCAAAAT 59.849 34.615 0.00 0.00 32.75 1.82
2711 2833 7.335924 AGACGCTATTACCTTTGCTTCAAAATA 59.664 33.333 0.00 0.00 32.75 1.40
2712 2834 7.996385 ACGCTATTACCTTTGCTTCAAAATAT 58.004 30.769 0.00 0.00 32.75 1.28
2713 2835 9.116067 ACGCTATTACCTTTGCTTCAAAATATA 57.884 29.630 0.00 0.00 32.75 0.86
2714 2836 9.944663 CGCTATTACCTTTGCTTCAAAATATAA 57.055 29.630 0.00 0.00 32.75 0.98
2737 2859 6.901081 AGACTTTTTGGTAGGAATCAAAGG 57.099 37.500 0.00 0.00 34.83 3.11
2738 2860 6.373759 AGACTTTTTGGTAGGAATCAAAGGT 58.626 36.000 0.00 0.00 34.83 3.50
2739 2861 7.523415 AGACTTTTTGGTAGGAATCAAAGGTA 58.477 34.615 0.00 0.00 34.83 3.08
2740 2862 7.665974 AGACTTTTTGGTAGGAATCAAAGGTAG 59.334 37.037 0.00 0.00 34.83 3.18
2741 2863 7.295340 ACTTTTTGGTAGGAATCAAAGGTAGT 58.705 34.615 0.00 0.00 34.83 2.73
2742 2864 8.442374 ACTTTTTGGTAGGAATCAAAGGTAGTA 58.558 33.333 0.00 0.00 34.83 1.82
2743 2865 8.625786 TTTTTGGTAGGAATCAAAGGTAGTAC 57.374 34.615 0.00 0.00 34.83 2.73
2744 2866 7.563724 TTTGGTAGGAATCAAAGGTAGTACT 57.436 36.000 0.00 0.00 0.00 2.73
2745 2867 8.669055 TTTGGTAGGAATCAAAGGTAGTACTA 57.331 34.615 0.00 0.00 0.00 1.82
2746 2868 8.669055 TTGGTAGGAATCAAAGGTAGTACTAA 57.331 34.615 3.61 0.00 0.00 2.24
2747 2869 8.669055 TGGTAGGAATCAAAGGTAGTACTAAA 57.331 34.615 3.61 0.00 0.00 1.85
2748 2870 9.275572 TGGTAGGAATCAAAGGTAGTACTAAAT 57.724 33.333 3.61 0.00 0.00 1.40
2761 2883 8.414778 AGGTAGTACTAAATAGTGATGAGTTGC 58.585 37.037 3.61 0.00 37.10 4.17
2762 2884 8.195436 GGTAGTACTAAATAGTGATGAGTTGCA 58.805 37.037 3.61 0.00 37.10 4.08
2763 2885 9.751542 GTAGTACTAAATAGTGATGAGTTGCAT 57.248 33.333 3.61 0.00 37.57 3.96
2764 2886 8.654230 AGTACTAAATAGTGATGAGTTGCATG 57.346 34.615 0.00 0.00 36.14 4.06
2765 2887 8.478066 AGTACTAAATAGTGATGAGTTGCATGA 58.522 33.333 0.00 0.00 36.14 3.07
2766 2888 9.098355 GTACTAAATAGTGATGAGTTGCATGAA 57.902 33.333 0.00 0.00 36.14 2.57
2767 2889 8.565896 ACTAAATAGTGATGAGTTGCATGAAA 57.434 30.769 0.00 0.00 37.34 2.69
2768 2890 9.013229 ACTAAATAGTGATGAGTTGCATGAAAA 57.987 29.630 0.00 0.00 37.34 2.29
2769 2891 9.282247 CTAAATAGTGATGAGTTGCATGAAAAC 57.718 33.333 0.00 0.00 37.34 2.43
2770 2892 7.458409 AATAGTGATGAGTTGCATGAAAACT 57.542 32.000 12.53 12.53 40.54 2.66
2771 2893 5.779529 AGTGATGAGTTGCATGAAAACTT 57.220 34.783 13.55 1.86 37.98 2.66
2772 2894 6.152932 AGTGATGAGTTGCATGAAAACTTT 57.847 33.333 13.55 6.71 37.98 2.66
2773 2895 5.981315 AGTGATGAGTTGCATGAAAACTTTG 59.019 36.000 13.55 0.00 37.98 2.77
2774 2896 5.176223 GTGATGAGTTGCATGAAAACTTTGG 59.824 40.000 13.55 0.00 37.98 3.28
2775 2897 4.734398 TGAGTTGCATGAAAACTTTGGT 57.266 36.364 13.55 0.00 37.98 3.67
2776 2898 5.083533 TGAGTTGCATGAAAACTTTGGTT 57.916 34.783 13.55 0.00 37.98 3.67
2777 2899 4.869297 TGAGTTGCATGAAAACTTTGGTTG 59.131 37.500 13.55 0.00 37.98 3.77
2778 2900 3.622612 AGTTGCATGAAAACTTTGGTTGC 59.377 39.130 8.07 0.00 34.16 4.17
2779 2901 3.257469 TGCATGAAAACTTTGGTTGCA 57.743 38.095 0.00 0.00 35.63 4.08
2780 2902 3.603532 TGCATGAAAACTTTGGTTGCAA 58.396 36.364 0.00 0.00 35.63 4.08
2781 2903 3.622163 TGCATGAAAACTTTGGTTGCAAG 59.378 39.130 0.00 0.00 35.63 4.01
2782 2904 3.002553 GCATGAAAACTTTGGTTGCAAGG 59.997 43.478 0.00 0.00 35.63 3.61
2783 2905 3.258971 TGAAAACTTTGGTTGCAAGGG 57.741 42.857 0.00 0.00 35.63 3.95
2784 2906 2.569404 TGAAAACTTTGGTTGCAAGGGT 59.431 40.909 0.00 0.00 35.63 4.34
2785 2907 3.769844 TGAAAACTTTGGTTGCAAGGGTA 59.230 39.130 0.00 0.00 35.63 3.69
2786 2908 4.223032 TGAAAACTTTGGTTGCAAGGGTAA 59.777 37.500 0.00 0.00 35.63 2.85
2787 2909 4.828072 AAACTTTGGTTGCAAGGGTAAA 57.172 36.364 0.00 0.00 35.63 2.01
2788 2910 4.828072 AACTTTGGTTGCAAGGGTAAAA 57.172 36.364 0.00 0.00 33.96 1.52
2789 2911 4.131649 ACTTTGGTTGCAAGGGTAAAAC 57.868 40.909 0.00 0.00 0.00 2.43
2790 2912 3.515901 ACTTTGGTTGCAAGGGTAAAACA 59.484 39.130 0.00 0.00 0.00 2.83
2791 2913 4.163268 ACTTTGGTTGCAAGGGTAAAACAT 59.837 37.500 0.00 0.00 0.00 2.71
2792 2914 3.742433 TGGTTGCAAGGGTAAAACATG 57.258 42.857 0.00 0.00 0.00 3.21
2793 2915 3.034635 TGGTTGCAAGGGTAAAACATGT 58.965 40.909 0.00 0.00 0.00 3.21
2794 2916 3.452627 TGGTTGCAAGGGTAAAACATGTT 59.547 39.130 4.92 4.92 0.00 2.71
2795 2917 3.807071 GGTTGCAAGGGTAAAACATGTTG 59.193 43.478 12.82 0.00 0.00 3.33
2796 2918 4.438148 GTTGCAAGGGTAAAACATGTTGT 58.562 39.130 12.82 9.51 0.00 3.32
2797 2919 4.314740 TGCAAGGGTAAAACATGTTGTC 57.685 40.909 12.82 5.68 0.00 3.18
2798 2920 3.957497 TGCAAGGGTAAAACATGTTGTCT 59.043 39.130 12.82 2.61 0.00 3.41
2799 2921 4.037446 TGCAAGGGTAAAACATGTTGTCTC 59.963 41.667 12.82 5.82 0.00 3.36
2800 2922 4.037446 GCAAGGGTAAAACATGTTGTCTCA 59.963 41.667 12.82 0.00 0.00 3.27
2801 2923 5.451242 GCAAGGGTAAAACATGTTGTCTCAA 60.451 40.000 12.82 0.00 0.00 3.02
2802 2924 6.738453 GCAAGGGTAAAACATGTTGTCTCAAT 60.738 38.462 12.82 0.00 0.00 2.57
2803 2925 7.523052 GCAAGGGTAAAACATGTTGTCTCAATA 60.523 37.037 12.82 0.00 0.00 1.90
2804 2926 7.448748 AGGGTAAAACATGTTGTCTCAATAC 57.551 36.000 12.82 0.00 0.00 1.89
2805 2927 7.231467 AGGGTAAAACATGTTGTCTCAATACT 58.769 34.615 12.82 0.00 0.00 2.12
2806 2928 7.724061 AGGGTAAAACATGTTGTCTCAATACTT 59.276 33.333 12.82 0.98 0.00 2.24
2807 2929 9.005777 GGGTAAAACATGTTGTCTCAATACTTA 57.994 33.333 12.82 0.00 0.00 2.24
2811 2933 8.677148 AAACATGTTGTCTCAATACTTAGTGT 57.323 30.769 12.82 0.00 0.00 3.55
2812 2934 7.891183 ACATGTTGTCTCAATACTTAGTGTC 57.109 36.000 0.00 0.00 0.00 3.67
2813 2935 6.586463 ACATGTTGTCTCAATACTTAGTGTCG 59.414 38.462 0.00 0.00 0.00 4.35
2814 2936 6.080648 TGTTGTCTCAATACTTAGTGTCGT 57.919 37.500 0.00 0.00 0.00 4.34
2815 2937 5.918576 TGTTGTCTCAATACTTAGTGTCGTG 59.081 40.000 0.00 0.00 0.00 4.35
2816 2938 5.700722 TGTCTCAATACTTAGTGTCGTGT 57.299 39.130 0.00 0.00 0.00 4.49
2817 2939 6.080648 TGTCTCAATACTTAGTGTCGTGTT 57.919 37.500 0.00 0.00 0.00 3.32
2818 2940 5.918576 TGTCTCAATACTTAGTGTCGTGTTG 59.081 40.000 0.00 0.00 34.72 3.33
2819 2941 6.147581 GTCTCAATACTTAGTGTCGTGTTGA 58.852 40.000 0.00 0.00 38.40 3.18
2820 2942 6.807230 GTCTCAATACTTAGTGTCGTGTTGAT 59.193 38.462 0.00 0.00 39.43 2.57
2821 2943 7.966753 GTCTCAATACTTAGTGTCGTGTTGATA 59.033 37.037 0.00 0.00 39.43 2.15
2822 2944 8.517056 TCTCAATACTTAGTGTCGTGTTGATAA 58.483 33.333 0.00 0.00 39.43 1.75
2823 2945 9.135843 CTCAATACTTAGTGTCGTGTTGATAAA 57.864 33.333 0.00 0.00 39.43 1.40
2824 2946 9.647797 TCAATACTTAGTGTCGTGTTGATAAAT 57.352 29.630 0.00 0.00 36.68 1.40
2829 2951 9.871238 ACTTAGTGTCGTGTTGATAAATAGATT 57.129 29.630 0.00 0.00 0.00 2.40
2831 2953 9.863845 TTAGTGTCGTGTTGATAAATAGATTGA 57.136 29.630 0.00 0.00 0.00 2.57
2832 2954 8.771920 AGTGTCGTGTTGATAAATAGATTGAA 57.228 30.769 0.00 0.00 0.00 2.69
2833 2955 9.214957 AGTGTCGTGTTGATAAATAGATTGAAA 57.785 29.630 0.00 0.00 0.00 2.69
2834 2956 9.478019 GTGTCGTGTTGATAAATAGATTGAAAG 57.522 33.333 0.00 0.00 0.00 2.62
2835 2957 9.214957 TGTCGTGTTGATAAATAGATTGAAAGT 57.785 29.630 0.00 0.00 0.00 2.66
2871 2993 7.667043 AAAAGAATACTTAGTGTCGCATTGA 57.333 32.000 0.00 0.00 35.05 2.57
2872 2994 7.849804 AAAGAATACTTAGTGTCGCATTGAT 57.150 32.000 0.00 0.00 35.05 2.57
2873 2995 6.834959 AGAATACTTAGTGTCGCATTGATG 57.165 37.500 0.00 0.00 0.00 3.07
2874 2996 6.573434 AGAATACTTAGTGTCGCATTGATGA 58.427 36.000 0.00 0.00 0.00 2.92
2875 2997 7.041721 AGAATACTTAGTGTCGCATTGATGAA 58.958 34.615 0.00 0.00 0.00 2.57
2876 2998 7.712639 AGAATACTTAGTGTCGCATTGATGAAT 59.287 33.333 0.00 0.00 0.00 2.57
2877 2999 8.887036 AATACTTAGTGTCGCATTGATGAATA 57.113 30.769 0.00 0.00 0.00 1.75
2878 3000 9.494271 AATACTTAGTGTCGCATTGATGAATAT 57.506 29.630 0.00 0.00 0.00 1.28
2881 3003 9.494271 ACTTAGTGTCGCATTGATGAATATATT 57.506 29.630 0.00 0.00 0.00 1.28
2882 3004 9.750882 CTTAGTGTCGCATTGATGAATATATTG 57.249 33.333 1.78 0.00 0.00 1.90
2883 3005 7.137490 AGTGTCGCATTGATGAATATATTGG 57.863 36.000 1.78 0.00 0.00 3.16
2884 3006 6.936335 AGTGTCGCATTGATGAATATATTGGA 59.064 34.615 1.78 0.00 0.00 3.53
2885 3007 7.445096 AGTGTCGCATTGATGAATATATTGGAA 59.555 33.333 1.78 0.00 0.00 3.53
2886 3008 7.747799 GTGTCGCATTGATGAATATATTGGAAG 59.252 37.037 1.78 0.00 0.00 3.46
2887 3009 7.445096 TGTCGCATTGATGAATATATTGGAAGT 59.555 33.333 1.78 0.00 0.00 3.01
2888 3010 8.292448 GTCGCATTGATGAATATATTGGAAGTT 58.708 33.333 1.78 0.00 0.00 2.66
2889 3011 8.849168 TCGCATTGATGAATATATTGGAAGTTT 58.151 29.630 1.78 0.00 0.00 2.66
2890 3012 9.467258 CGCATTGATGAATATATTGGAAGTTTT 57.533 29.630 1.78 0.00 0.00 2.43
2921 3043 3.912899 AAAAAGAATGCTTGGGCCG 57.087 47.368 0.00 0.00 37.74 6.13
2922 3044 0.320683 AAAAAGAATGCTTGGGCCGC 60.321 50.000 0.00 0.00 37.74 6.53
2923 3045 2.490993 AAAAGAATGCTTGGGCCGCG 62.491 55.000 0.00 0.00 37.74 6.46
2924 3046 4.722700 AGAATGCTTGGGCCGCGT 62.723 61.111 4.92 0.00 37.74 6.01
2925 3047 3.747976 GAATGCTTGGGCCGCGTT 61.748 61.111 10.18 10.18 39.17 4.84
2926 3048 3.683587 GAATGCTTGGGCCGCGTTC 62.684 63.158 18.48 18.48 43.55 3.95
2937 3059 4.856607 CGCGTTCGGCTCCTCTCC 62.857 72.222 0.00 0.00 40.44 3.71
2939 3061 4.856607 CGTTCGGCTCCTCTCCGC 62.857 72.222 0.00 0.00 46.05 5.54
2940 3062 3.453679 GTTCGGCTCCTCTCCGCT 61.454 66.667 0.00 0.00 46.05 5.52
2941 3063 3.141488 TTCGGCTCCTCTCCGCTC 61.141 66.667 0.00 0.00 46.05 5.03
2944 3066 4.851214 GGCTCCTCTCCGCTCCCT 62.851 72.222 0.00 0.00 0.00 4.20
2945 3067 3.535962 GCTCCTCTCCGCTCCCTG 61.536 72.222 0.00 0.00 0.00 4.45
2946 3068 2.837291 CTCCTCTCCGCTCCCTGG 60.837 72.222 0.00 0.00 0.00 4.45
2947 3069 3.347590 TCCTCTCCGCTCCCTGGA 61.348 66.667 0.00 0.00 0.00 3.86
2948 3070 3.151022 CCTCTCCGCTCCCTGGAC 61.151 72.222 0.00 0.00 0.00 4.02
2949 3071 2.363018 CTCTCCGCTCCCTGGACA 60.363 66.667 0.00 0.00 0.00 4.02
2950 3072 2.363018 TCTCCGCTCCCTGGACAG 60.363 66.667 0.00 0.00 0.00 3.51
2951 3073 4.154347 CTCCGCTCCCTGGACAGC 62.154 72.222 0.00 0.96 0.00 4.40
2955 3077 4.828925 GCTCCCTGGACAGCGCTC 62.829 72.222 7.13 0.00 0.00 5.03
2956 3078 4.154347 CTCCCTGGACAGCGCTCC 62.154 72.222 7.13 8.09 0.00 4.70
2974 3096 3.827898 CGGAGCGGACCAGTCTCC 61.828 72.222 12.25 12.25 42.19 3.71
2975 3097 2.680352 GGAGCGGACCAGTCTCCA 60.680 66.667 15.77 0.00 44.38 3.86
2976 3098 2.716017 GGAGCGGACCAGTCTCCAG 61.716 68.421 15.77 0.00 44.38 3.86
2977 3099 3.363844 GAGCGGACCAGTCTCCAGC 62.364 68.421 0.00 0.00 32.96 4.85
2978 3100 3.386237 GCGGACCAGTCTCCAGCT 61.386 66.667 0.00 0.00 31.26 4.24
2979 3101 2.052690 GCGGACCAGTCTCCAGCTA 61.053 63.158 0.00 0.00 31.26 3.32
2980 3102 1.605058 GCGGACCAGTCTCCAGCTAA 61.605 60.000 0.00 0.00 31.26 3.09
2981 3103 1.115467 CGGACCAGTCTCCAGCTAAT 58.885 55.000 0.00 0.00 0.00 1.73
2982 3104 1.482593 CGGACCAGTCTCCAGCTAATT 59.517 52.381 0.00 0.00 0.00 1.40
2983 3105 2.093447 CGGACCAGTCTCCAGCTAATTT 60.093 50.000 0.00 0.00 0.00 1.82
2984 3106 3.619979 CGGACCAGTCTCCAGCTAATTTT 60.620 47.826 0.00 0.00 0.00 1.82
2985 3107 4.336280 GGACCAGTCTCCAGCTAATTTTT 58.664 43.478 0.00 0.00 0.00 1.94
2986 3108 5.497474 GGACCAGTCTCCAGCTAATTTTTA 58.503 41.667 0.00 0.00 0.00 1.52
2987 3109 5.944007 GGACCAGTCTCCAGCTAATTTTTAA 59.056 40.000 0.00 0.00 0.00 1.52
2988 3110 6.094186 GGACCAGTCTCCAGCTAATTTTTAAG 59.906 42.308 0.00 0.00 0.00 1.85
2989 3111 5.946377 ACCAGTCTCCAGCTAATTTTTAAGG 59.054 40.000 0.00 0.00 0.00 2.69
2990 3112 6.180472 CCAGTCTCCAGCTAATTTTTAAGGA 58.820 40.000 0.00 0.00 0.00 3.36
2991 3113 6.317391 CCAGTCTCCAGCTAATTTTTAAGGAG 59.683 42.308 4.90 4.90 41.88 3.69
2992 3114 5.883115 AGTCTCCAGCTAATTTTTAAGGAGC 59.117 40.000 6.16 2.92 40.66 4.70
2993 3115 4.876107 TCTCCAGCTAATTTTTAAGGAGCG 59.124 41.667 6.16 0.00 40.66 5.03
2994 3116 3.945285 TCCAGCTAATTTTTAAGGAGCGG 59.055 43.478 0.00 0.00 38.20 5.52
2995 3117 3.489229 CCAGCTAATTTTTAAGGAGCGGC 60.489 47.826 0.00 0.00 38.20 6.53
2996 3118 3.378427 CAGCTAATTTTTAAGGAGCGGCT 59.622 43.478 0.00 0.00 38.20 5.52
2997 3119 4.574828 CAGCTAATTTTTAAGGAGCGGCTA 59.425 41.667 0.60 0.00 38.20 3.93
2998 3120 5.065988 CAGCTAATTTTTAAGGAGCGGCTAA 59.934 40.000 0.60 0.00 38.20 3.09
2999 3121 5.650703 AGCTAATTTTTAAGGAGCGGCTAAA 59.349 36.000 0.60 0.00 38.20 1.85
3000 3122 6.152154 AGCTAATTTTTAAGGAGCGGCTAAAA 59.848 34.615 0.60 6.27 38.20 1.52
3001 3123 6.252869 GCTAATTTTTAAGGAGCGGCTAAAAC 59.747 38.462 0.60 0.00 0.00 2.43
3002 3124 4.508461 TTTTTAAGGAGCGGCTAAAACC 57.492 40.909 0.60 0.00 0.00 3.27
3003 3125 2.118313 TTAAGGAGCGGCTAAAACCC 57.882 50.000 0.60 0.00 0.00 4.11
3004 3126 0.985760 TAAGGAGCGGCTAAAACCCA 59.014 50.000 0.60 0.00 0.00 4.51
3005 3127 0.322546 AAGGAGCGGCTAAAACCCAG 60.323 55.000 0.60 0.00 0.00 4.45
3006 3128 2.407428 GGAGCGGCTAAAACCCAGC 61.407 63.158 0.60 0.00 38.35 4.85
3007 3129 1.377333 GAGCGGCTAAAACCCAGCT 60.377 57.895 0.60 0.00 39.09 4.24
3008 3130 1.369839 GAGCGGCTAAAACCCAGCTC 61.370 60.000 0.60 0.00 39.69 4.09
3009 3131 1.377333 GCGGCTAAAACCCAGCTCT 60.377 57.895 0.00 0.00 39.09 4.09
3010 3132 0.107848 GCGGCTAAAACCCAGCTCTA 60.108 55.000 0.00 0.00 39.09 2.43
3011 3133 1.653151 CGGCTAAAACCCAGCTCTAC 58.347 55.000 0.00 0.00 39.09 2.59
3012 3134 1.066430 CGGCTAAAACCCAGCTCTACA 60.066 52.381 0.00 0.00 39.09 2.74
3013 3135 2.633488 GGCTAAAACCCAGCTCTACAG 58.367 52.381 0.00 0.00 39.09 2.74
3022 3144 3.604629 GCTCTACAGCTCCACGGA 58.395 61.111 0.00 0.00 43.09 4.69
3023 3145 1.435515 GCTCTACAGCTCCACGGAG 59.564 63.158 8.84 8.84 43.09 4.63
3024 3146 1.316706 GCTCTACAGCTCCACGGAGT 61.317 60.000 14.48 0.00 42.72 3.85
3025 3147 0.736053 CTCTACAGCTCCACGGAGTC 59.264 60.000 14.48 7.11 41.61 3.36
3026 3148 0.037734 TCTACAGCTCCACGGAGTCA 59.962 55.000 14.48 0.00 41.61 3.41
3027 3149 0.453793 CTACAGCTCCACGGAGTCAG 59.546 60.000 14.48 7.35 41.61 3.51
3028 3150 1.595993 TACAGCTCCACGGAGTCAGC 61.596 60.000 14.48 1.05 41.61 4.26
3029 3151 2.283532 AGCTCCACGGAGTCAGCT 60.284 61.111 14.48 3.47 45.84 4.24
3030 3152 2.183046 GCTCCACGGAGTCAGCTC 59.817 66.667 14.48 0.00 41.61 4.09
3038 3160 2.888863 GAGTCAGCTCCACGGAGG 59.111 66.667 14.86 0.00 42.19 4.30
3039 3161 2.681778 AGTCAGCTCCACGGAGGG 60.682 66.667 14.86 0.00 42.19 4.30
3040 3162 2.680352 GTCAGCTCCACGGAGGGA 60.680 66.667 14.86 0.00 42.19 4.20
3041 3163 2.060980 GTCAGCTCCACGGAGGGAT 61.061 63.158 14.86 0.00 42.19 3.85
3042 3164 1.306141 TCAGCTCCACGGAGGGATT 60.306 57.895 14.86 0.00 42.19 3.01
3043 3165 1.144936 CAGCTCCACGGAGGGATTC 59.855 63.158 14.86 0.00 42.19 2.52
3044 3166 2.066999 AGCTCCACGGAGGGATTCC 61.067 63.158 14.86 0.00 42.19 3.01
3051 3173 4.657952 GGAGGGATTCCAAACGGG 57.342 61.111 4.80 0.00 46.01 5.28
3052 3174 1.076995 GGAGGGATTCCAAACGGGG 60.077 63.158 4.80 0.00 46.01 5.73
3053 3175 1.753078 GAGGGATTCCAAACGGGGC 60.753 63.158 4.80 0.00 37.22 5.80
3054 3176 2.758327 GGGATTCCAAACGGGGCC 60.758 66.667 4.80 0.00 37.22 5.80
3055 3177 2.359011 GGATTCCAAACGGGGCCT 59.641 61.111 0.84 0.00 37.22 5.19
3056 3178 1.304962 GGATTCCAAACGGGGCCTT 60.305 57.895 0.84 0.00 37.22 4.35
3057 3179 0.033894 GGATTCCAAACGGGGCCTTA 60.034 55.000 0.84 0.00 37.22 2.69
3058 3180 1.389555 GATTCCAAACGGGGCCTTAG 58.610 55.000 0.84 0.00 37.22 2.18
3059 3181 0.702316 ATTCCAAACGGGGCCTTAGT 59.298 50.000 0.84 0.00 37.22 2.24
3060 3182 0.250989 TTCCAAACGGGGCCTTAGTG 60.251 55.000 0.84 0.00 37.22 2.74
3061 3183 1.074248 CCAAACGGGGCCTTAGTGT 59.926 57.895 0.84 0.00 0.00 3.55
3062 3184 0.958876 CCAAACGGGGCCTTAGTGTC 60.959 60.000 0.84 0.00 0.00 3.67
3063 3185 0.250553 CAAACGGGGCCTTAGTGTCA 60.251 55.000 0.84 0.00 0.00 3.58
3064 3186 0.250597 AAACGGGGCCTTAGTGTCAC 60.251 55.000 0.84 0.00 0.00 3.67
3065 3187 2.125673 CGGGGCCTTAGTGTCACG 60.126 66.667 0.84 0.00 0.00 4.35
3066 3188 2.939261 CGGGGCCTTAGTGTCACGT 61.939 63.158 0.84 0.00 0.00 4.49
3067 3189 1.373812 GGGGCCTTAGTGTCACGTT 59.626 57.895 0.84 0.00 0.00 3.99
3068 3190 0.953960 GGGGCCTTAGTGTCACGTTG 60.954 60.000 0.84 0.00 0.00 4.10
3069 3191 0.250166 GGGCCTTAGTGTCACGTTGT 60.250 55.000 0.84 0.00 0.00 3.32
3070 3192 1.589803 GGCCTTAGTGTCACGTTGTT 58.410 50.000 0.00 0.00 0.00 2.83
3071 3193 1.529865 GGCCTTAGTGTCACGTTGTTC 59.470 52.381 0.00 0.00 0.00 3.18
3072 3194 2.480845 GCCTTAGTGTCACGTTGTTCT 58.519 47.619 0.00 0.00 0.00 3.01
3073 3195 2.870411 GCCTTAGTGTCACGTTGTTCTT 59.130 45.455 0.00 0.00 0.00 2.52
3074 3196 4.053295 GCCTTAGTGTCACGTTGTTCTTA 58.947 43.478 0.00 0.00 0.00 2.10
3075 3197 4.689345 GCCTTAGTGTCACGTTGTTCTTAT 59.311 41.667 0.00 0.00 0.00 1.73
3076 3198 5.163982 GCCTTAGTGTCACGTTGTTCTTATC 60.164 44.000 0.00 0.00 0.00 1.75
3077 3199 5.924254 CCTTAGTGTCACGTTGTTCTTATCA 59.076 40.000 0.00 0.00 0.00 2.15
3078 3200 6.590292 CCTTAGTGTCACGTTGTTCTTATCAT 59.410 38.462 0.00 0.00 0.00 2.45
3079 3201 5.845985 AGTGTCACGTTGTTCTTATCATG 57.154 39.130 0.00 0.00 0.00 3.07
3080 3202 5.538118 AGTGTCACGTTGTTCTTATCATGA 58.462 37.500 0.00 0.00 0.00 3.07
3081 3203 6.166279 AGTGTCACGTTGTTCTTATCATGAT 58.834 36.000 13.81 13.81 0.00 2.45
3082 3204 6.091305 AGTGTCACGTTGTTCTTATCATGATG 59.909 38.462 18.72 2.44 0.00 3.07
3083 3205 5.931724 TGTCACGTTGTTCTTATCATGATGT 59.068 36.000 18.72 1.11 0.00 3.06
3084 3206 6.426633 TGTCACGTTGTTCTTATCATGATGTT 59.573 34.615 18.72 0.00 0.00 2.71
3085 3207 6.738200 GTCACGTTGTTCTTATCATGATGTTG 59.262 38.462 18.72 8.08 0.00 3.33
3086 3208 6.023435 CACGTTGTTCTTATCATGATGTTGG 58.977 40.000 18.72 5.71 0.00 3.77
3087 3209 5.937540 ACGTTGTTCTTATCATGATGTTGGA 59.062 36.000 18.72 7.84 0.00 3.53
3088 3210 6.092670 ACGTTGTTCTTATCATGATGTTGGAG 59.907 38.462 18.72 8.16 0.00 3.86
3089 3211 6.261118 GTTGTTCTTATCATGATGTTGGAGC 58.739 40.000 18.72 12.02 0.00 4.70
3090 3212 5.499313 TGTTCTTATCATGATGTTGGAGCA 58.501 37.500 18.72 14.08 0.00 4.26
3091 3213 5.355071 TGTTCTTATCATGATGTTGGAGCAC 59.645 40.000 18.72 8.90 0.00 4.40
3092 3214 4.454678 TCTTATCATGATGTTGGAGCACC 58.545 43.478 18.72 0.00 0.00 5.01
3093 3215 2.062971 ATCATGATGTTGGAGCACCC 57.937 50.000 7.59 0.00 34.81 4.61
3094 3216 0.392863 TCATGATGTTGGAGCACCCG 60.393 55.000 0.00 0.00 37.93 5.28
3095 3217 1.750399 ATGATGTTGGAGCACCCGC 60.750 57.895 0.00 0.00 37.93 6.13
3096 3218 3.134127 GATGTTGGAGCACCCGCC 61.134 66.667 0.00 0.00 39.83 6.13
3097 3219 3.628646 GATGTTGGAGCACCCGCCT 62.629 63.158 0.00 0.00 39.83 5.52
3098 3220 3.925630 ATGTTGGAGCACCCGCCTG 62.926 63.158 0.00 0.00 39.83 4.85
3099 3221 4.329545 GTTGGAGCACCCGCCTGA 62.330 66.667 0.00 0.00 39.83 3.86
3100 3222 4.020617 TTGGAGCACCCGCCTGAG 62.021 66.667 0.00 0.00 39.83 3.35
3108 3230 4.410400 CCCGCCTGAGGGTTCACC 62.410 72.222 0.00 0.00 46.38 4.02
3109 3231 4.760047 CCGCCTGAGGGTTCACCG 62.760 72.222 0.00 0.00 46.96 4.94
3113 3235 4.680237 CTGAGGGTTCACCGCGCA 62.680 66.667 8.75 0.00 46.96 6.09
3114 3236 4.680237 TGAGGGTTCACCGCGCAG 62.680 66.667 8.75 0.00 46.96 5.18
3118 3240 4.681978 GGTTCACCGCGCAGGAGT 62.682 66.667 22.10 4.51 45.00 3.85
3119 3241 3.414700 GTTCACCGCGCAGGAGTG 61.415 66.667 22.10 15.87 45.00 3.51
3163 3285 4.959596 GCTCTCGCCGATGCCTCC 62.960 72.222 0.00 0.00 0.00 4.30
3164 3286 4.292178 CTCTCGCCGATGCCTCCC 62.292 72.222 0.00 0.00 0.00 4.30
3165 3287 4.841617 TCTCGCCGATGCCTCCCT 62.842 66.667 0.00 0.00 0.00 4.20
3166 3288 2.912542 CTCGCCGATGCCTCCCTA 60.913 66.667 0.00 0.00 0.00 3.53
3167 3289 2.912542 TCGCCGATGCCTCCCTAG 60.913 66.667 0.00 0.00 0.00 3.02
3168 3290 4.671569 CGCCGATGCCTCCCTAGC 62.672 72.222 0.00 0.00 0.00 3.42
3169 3291 3.550431 GCCGATGCCTCCCTAGCA 61.550 66.667 0.00 0.00 45.94 3.49
3170 3292 2.423446 CCGATGCCTCCCTAGCAC 59.577 66.667 0.00 0.00 44.40 4.40
3171 3293 2.136878 CCGATGCCTCCCTAGCACT 61.137 63.158 0.00 0.00 44.40 4.40
3172 3294 1.365633 CGATGCCTCCCTAGCACTC 59.634 63.158 0.00 0.00 44.40 3.51
3173 3295 1.112315 CGATGCCTCCCTAGCACTCT 61.112 60.000 0.00 0.00 44.40 3.24
3174 3296 0.392336 GATGCCTCCCTAGCACTCTG 59.608 60.000 0.00 0.00 44.40 3.35
3175 3297 1.694133 ATGCCTCCCTAGCACTCTGC 61.694 60.000 0.00 0.00 44.40 4.26
3185 3307 2.356313 CACTCTGCGCTGTCCGTT 60.356 61.111 9.73 0.00 39.71 4.44
3186 3308 2.049063 ACTCTGCGCTGTCCGTTC 60.049 61.111 9.73 0.00 39.71 3.95
3187 3309 2.811317 CTCTGCGCTGTCCGTTCC 60.811 66.667 9.73 0.00 39.71 3.62
3188 3310 4.717629 TCTGCGCTGTCCGTTCCG 62.718 66.667 9.73 0.00 39.71 4.30
3209 3331 4.496336 GCGGCTCCTTGGGATGCT 62.496 66.667 0.00 0.00 0.00 3.79
3210 3332 2.273449 CGGCTCCTTGGGATGCTT 59.727 61.111 0.00 0.00 0.00 3.91
3211 3333 1.821332 CGGCTCCTTGGGATGCTTC 60.821 63.158 0.00 0.00 0.00 3.86
3212 3334 1.821332 GGCTCCTTGGGATGCTTCG 60.821 63.158 0.00 0.00 0.00 3.79
3213 3335 2.476320 GCTCCTTGGGATGCTTCGC 61.476 63.158 9.44 9.44 35.46 4.70
3214 3336 1.222936 CTCCTTGGGATGCTTCGCT 59.777 57.895 16.11 0.00 35.88 4.93
3215 3337 1.078214 TCCTTGGGATGCTTCGCTG 60.078 57.895 16.11 9.67 35.88 5.18
3216 3338 1.078214 CCTTGGGATGCTTCGCTGA 60.078 57.895 16.11 5.88 35.88 4.26
3217 3339 1.372087 CCTTGGGATGCTTCGCTGAC 61.372 60.000 16.11 0.00 35.88 3.51
3218 3340 0.392193 CTTGGGATGCTTCGCTGACT 60.392 55.000 16.11 0.00 35.88 3.41
3219 3341 0.391661 TTGGGATGCTTCGCTGACTC 60.392 55.000 16.11 0.00 35.88 3.36
3220 3342 1.260538 TGGGATGCTTCGCTGACTCT 61.261 55.000 16.11 0.00 35.88 3.24
3221 3343 0.529555 GGGATGCTTCGCTGACTCTC 60.530 60.000 9.14 0.00 32.30 3.20
3222 3344 0.529555 GGATGCTTCGCTGACTCTCC 60.530 60.000 0.00 0.00 0.00 3.71
3223 3345 0.174389 GATGCTTCGCTGACTCTCCA 59.826 55.000 0.00 0.00 0.00 3.86
3224 3346 0.108424 ATGCTTCGCTGACTCTCCAC 60.108 55.000 0.00 0.00 0.00 4.02
3225 3347 1.803519 GCTTCGCTGACTCTCCACG 60.804 63.158 0.00 0.00 0.00 4.94
3226 3348 1.803519 CTTCGCTGACTCTCCACGC 60.804 63.158 0.00 0.00 0.00 5.34
3227 3349 3.282745 TTCGCTGACTCTCCACGCC 62.283 63.158 0.00 0.00 0.00 5.68
3228 3350 4.056125 CGCTGACTCTCCACGCCA 62.056 66.667 0.00 0.00 0.00 5.69
3229 3351 2.581354 GCTGACTCTCCACGCCAT 59.419 61.111 0.00 0.00 0.00 4.40
3230 3352 1.520342 GCTGACTCTCCACGCCATC 60.520 63.158 0.00 0.00 0.00 3.51
3231 3353 1.142748 CTGACTCTCCACGCCATCC 59.857 63.158 0.00 0.00 0.00 3.51
3232 3354 2.105128 GACTCTCCACGCCATCCG 59.895 66.667 0.00 0.00 44.21 4.18
3233 3355 2.362503 ACTCTCCACGCCATCCGA 60.363 61.111 0.00 0.00 41.02 4.55
3234 3356 1.739338 GACTCTCCACGCCATCCGAT 61.739 60.000 0.00 0.00 41.02 4.18
3235 3357 1.006805 CTCTCCACGCCATCCGATC 60.007 63.158 0.00 0.00 41.02 3.69
3236 3358 1.455773 TCTCCACGCCATCCGATCT 60.456 57.895 0.00 0.00 41.02 2.75
3237 3359 1.006805 CTCCACGCCATCCGATCTC 60.007 63.158 0.00 0.00 41.02 2.75
3238 3360 1.455773 TCCACGCCATCCGATCTCT 60.456 57.895 0.00 0.00 41.02 3.10
3239 3361 1.300465 CCACGCCATCCGATCTCTG 60.300 63.158 0.00 0.00 41.02 3.35
3240 3362 1.953138 CACGCCATCCGATCTCTGC 60.953 63.158 0.00 0.00 41.02 4.26
3241 3363 2.732468 CGCCATCCGATCTCTGCG 60.732 66.667 0.00 0.00 40.02 5.18
3263 3385 4.643387 GCCTGCACCCGACCTGTT 62.643 66.667 0.00 0.00 0.00 3.16
3264 3386 2.113139 CCTGCACCCGACCTGTTT 59.887 61.111 0.00 0.00 0.00 2.83
3265 3387 1.528309 CCTGCACCCGACCTGTTTT 60.528 57.895 0.00 0.00 0.00 2.43
3266 3388 1.515521 CCTGCACCCGACCTGTTTTC 61.516 60.000 0.00 0.00 0.00 2.29
3267 3389 0.535102 CTGCACCCGACCTGTTTTCT 60.535 55.000 0.00 0.00 0.00 2.52
3268 3390 0.106918 TGCACCCGACCTGTTTTCTT 60.107 50.000 0.00 0.00 0.00 2.52
3269 3391 0.591659 GCACCCGACCTGTTTTCTTC 59.408 55.000 0.00 0.00 0.00 2.87
3270 3392 1.814248 GCACCCGACCTGTTTTCTTCT 60.814 52.381 0.00 0.00 0.00 2.85
3271 3393 1.873591 CACCCGACCTGTTTTCTTCTG 59.126 52.381 0.00 0.00 0.00 3.02
3272 3394 1.202770 ACCCGACCTGTTTTCTTCTGG 60.203 52.381 0.00 0.00 0.00 3.86
3273 3395 1.523758 CCGACCTGTTTTCTTCTGGG 58.476 55.000 0.00 0.00 0.00 4.45
3274 3396 1.071699 CCGACCTGTTTTCTTCTGGGA 59.928 52.381 0.00 0.00 0.00 4.37
3275 3397 2.486548 CCGACCTGTTTTCTTCTGGGAA 60.487 50.000 0.00 0.00 0.00 3.97
3276 3398 2.548480 CGACCTGTTTTCTTCTGGGAAC 59.452 50.000 0.00 0.00 0.00 3.62
3277 3399 3.551846 GACCTGTTTTCTTCTGGGAACA 58.448 45.455 0.00 0.00 39.59 3.18
3278 3400 3.951680 GACCTGTTTTCTTCTGGGAACAA 59.048 43.478 0.00 0.00 42.06 2.83
3279 3401 4.546674 ACCTGTTTTCTTCTGGGAACAAT 58.453 39.130 0.00 0.00 42.06 2.71
3280 3402 4.342092 ACCTGTTTTCTTCTGGGAACAATG 59.658 41.667 0.00 0.00 42.06 2.82
3281 3403 4.584325 CCTGTTTTCTTCTGGGAACAATGA 59.416 41.667 0.00 0.00 42.06 2.57
3282 3404 5.507985 CCTGTTTTCTTCTGGGAACAATGAC 60.508 44.000 0.00 0.00 42.06 3.06
3283 3405 4.036262 TGTTTTCTTCTGGGAACAATGACG 59.964 41.667 0.00 0.00 42.06 4.35
3284 3406 1.808411 TCTTCTGGGAACAATGACGC 58.192 50.000 0.00 0.00 42.06 5.19
3285 3407 0.443869 CTTCTGGGAACAATGACGCG 59.556 55.000 3.53 3.53 42.06 6.01
3286 3408 0.250124 TTCTGGGAACAATGACGCGT 60.250 50.000 13.85 13.85 42.06 6.01
3287 3409 0.948623 TCTGGGAACAATGACGCGTG 60.949 55.000 20.70 4.21 42.06 5.34
3288 3410 1.911293 CTGGGAACAATGACGCGTGG 61.911 60.000 20.70 5.79 42.06 4.94
3289 3411 2.686816 GGGAACAATGACGCGTGGG 61.687 63.158 20.70 5.37 0.00 4.61
3290 3412 2.175811 GAACAATGACGCGTGGGC 59.824 61.111 20.70 1.97 0.00 5.36
3291 3413 3.322706 GAACAATGACGCGTGGGCC 62.323 63.158 20.70 1.49 35.02 5.80
3292 3414 4.634703 ACAATGACGCGTGGGCCA 62.635 61.111 20.70 9.08 35.02 5.36
3293 3415 4.101790 CAATGACGCGTGGGCCAC 62.102 66.667 26.95 26.95 35.02 5.01
3294 3416 4.634703 AATGACGCGTGGGCCACA 62.635 61.111 34.11 16.61 33.40 4.17
3302 3424 2.665185 GTGGGCCACAGACACGAC 60.665 66.667 31.26 0.00 34.08 4.34
3303 3425 3.936203 TGGGCCACAGACACGACC 61.936 66.667 0.00 0.00 0.00 4.79
3305 3427 3.986006 GGCCACAGACACGACCGA 61.986 66.667 0.00 0.00 0.00 4.69
3306 3428 2.430921 GCCACAGACACGACCGAG 60.431 66.667 0.00 0.00 0.00 4.63
3307 3429 2.258591 CCACAGACACGACCGAGG 59.741 66.667 0.00 0.00 0.00 4.63
3308 3430 2.430921 CACAGACACGACCGAGGC 60.431 66.667 0.00 0.00 0.00 4.70
3309 3431 3.681835 ACAGACACGACCGAGGCC 61.682 66.667 0.00 0.00 0.00 5.19
3310 3432 3.680786 CAGACACGACCGAGGCCA 61.681 66.667 5.01 0.00 0.00 5.36
3311 3433 3.681835 AGACACGACCGAGGCCAC 61.682 66.667 5.01 0.00 0.00 5.01
3312 3434 4.736896 GACACGACCGAGGCCACC 62.737 72.222 5.01 0.00 0.00 4.61
3314 3436 4.003788 CACGACCGAGGCCACCTT 62.004 66.667 5.01 0.00 31.76 3.50
3315 3437 3.692406 ACGACCGAGGCCACCTTC 61.692 66.667 5.01 0.00 31.76 3.46
3316 3438 4.452733 CGACCGAGGCCACCTTCC 62.453 72.222 5.01 0.00 31.76 3.46
3317 3439 3.003763 GACCGAGGCCACCTTCCT 61.004 66.667 5.01 0.00 31.76 3.36
3318 3440 3.316573 GACCGAGGCCACCTTCCTG 62.317 68.421 5.01 0.00 31.76 3.86
3319 3441 4.785453 CCGAGGCCACCTTCCTGC 62.785 72.222 5.01 0.00 31.76 4.85
3321 3443 4.785453 GAGGCCACCTTCCTGCGG 62.785 72.222 5.01 0.00 31.76 5.69
3325 3447 3.411517 CCACCTTCCTGCGGGGAT 61.412 66.667 12.87 0.00 44.66 3.85
3326 3448 2.677228 CACCTTCCTGCGGGGATT 59.323 61.111 12.87 0.00 44.66 3.01
3327 3449 1.000896 CACCTTCCTGCGGGGATTT 60.001 57.895 12.87 0.00 44.66 2.17
3328 3450 0.611896 CACCTTCCTGCGGGGATTTT 60.612 55.000 12.87 0.00 44.66 1.82
3329 3451 0.323451 ACCTTCCTGCGGGGATTTTC 60.323 55.000 12.87 0.00 44.66 2.29
3330 3452 0.323360 CCTTCCTGCGGGGATTTTCA 60.323 55.000 12.87 0.00 44.66 2.69
3331 3453 1.686115 CCTTCCTGCGGGGATTTTCAT 60.686 52.381 12.87 0.00 44.66 2.57
3332 3454 1.678101 CTTCCTGCGGGGATTTTCATC 59.322 52.381 12.87 0.00 44.66 2.92
3333 3455 0.463654 TCCTGCGGGGATTTTCATCG 60.464 55.000 12.87 0.00 39.58 3.84
3334 3456 1.356624 CTGCGGGGATTTTCATCGC 59.643 57.895 0.00 0.00 45.60 4.58
3338 3460 4.235731 GGGATTTTCATCGCCCGT 57.764 55.556 0.00 0.00 36.55 5.28
3339 3461 3.390003 GGGATTTTCATCGCCCGTA 57.610 52.632 0.00 0.00 36.55 4.02
3340 3462 1.892209 GGGATTTTCATCGCCCGTAT 58.108 50.000 0.00 0.00 36.55 3.06
3341 3463 1.535462 GGGATTTTCATCGCCCGTATG 59.465 52.381 0.00 0.00 36.55 2.39
3342 3464 2.489971 GGATTTTCATCGCCCGTATGA 58.510 47.619 0.00 0.00 0.00 2.15
3343 3465 2.480419 GGATTTTCATCGCCCGTATGAG 59.520 50.000 0.00 0.00 34.93 2.90
3344 3466 1.295792 TTTTCATCGCCCGTATGAGC 58.704 50.000 0.00 0.00 34.93 4.26
3345 3467 0.176910 TTTCATCGCCCGTATGAGCA 59.823 50.000 0.00 0.00 34.93 4.26
3346 3468 0.392706 TTCATCGCCCGTATGAGCAT 59.607 50.000 0.00 0.00 34.93 3.79
3347 3469 0.392706 TCATCGCCCGTATGAGCATT 59.607 50.000 0.00 0.00 0.00 3.56
3348 3470 0.514255 CATCGCCCGTATGAGCATTG 59.486 55.000 0.00 0.00 0.00 2.82
3349 3471 0.106708 ATCGCCCGTATGAGCATTGT 59.893 50.000 0.00 0.00 0.00 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 0.536233 TGTGTTGGTTGCCTACGCAT 60.536 50.000 10.85 0.00 46.67 4.73
176 200 2.212752 ATTTGGCATAGGGAGGGAGA 57.787 50.000 0.00 0.00 0.00 3.71
210 243 6.449635 TGCGCAGGAATCACTAAAAATAAT 57.550 33.333 5.66 0.00 0.00 1.28
211 244 5.888691 TGCGCAGGAATCACTAAAAATAA 57.111 34.783 5.66 0.00 0.00 1.40
229 262 0.169009 GTTGGTTCTGAAGGATGCGC 59.831 55.000 0.00 0.00 0.00 6.09
257 290 0.185901 AAGCTTCTGGGTTGGCTTGA 59.814 50.000 0.00 0.00 42.40 3.02
355 390 2.972505 ACGCTGTCTGGGCAAACG 60.973 61.111 0.00 0.00 0.00 3.60
433 490 7.176690 GGATCTCCGATCTCTTTCTATTTCTCT 59.823 40.741 4.10 0.00 0.00 3.10
445 502 1.216678 ACAGGTGGATCTCCGATCTCT 59.783 52.381 4.10 0.00 39.43 3.10
507 594 1.739338 CTAGCGCCCCTCACCACTAG 61.739 65.000 2.29 0.00 0.00 2.57
516 603 2.393710 ATCAGATCCCTAGCGCCCCT 62.394 60.000 2.29 0.00 0.00 4.79
669 759 2.974698 ACGTCCGGTCGAACGACT 60.975 61.111 27.26 7.82 44.04 4.18
812 904 2.508439 ACGCCGATAACTGCCACG 60.508 61.111 0.00 0.00 0.00 4.94
835 927 9.850628 TTACGAATAAGGGAAAGATCATATACG 57.149 33.333 0.00 0.00 0.00 3.06
839 931 9.893634 TTGTTTACGAATAAGGGAAAGATCATA 57.106 29.630 0.00 0.00 0.00 2.15
840 932 8.801882 TTGTTTACGAATAAGGGAAAGATCAT 57.198 30.769 0.00 0.00 0.00 2.45
841 933 8.624367 TTTGTTTACGAATAAGGGAAAGATCA 57.376 30.769 0.00 0.00 0.00 2.92
842 934 9.902196 TTTTTGTTTACGAATAAGGGAAAGATC 57.098 29.630 0.00 0.00 0.00 2.75
859 951 7.565768 AGGGTGTTTTAGGGAGATTTTTGTTTA 59.434 33.333 0.00 0.00 0.00 2.01
863 955 7.718334 ATAGGGTGTTTTAGGGAGATTTTTG 57.282 36.000 0.00 0.00 0.00 2.44
868 962 9.421399 CAAAATTATAGGGTGTTTTAGGGAGAT 57.579 33.333 0.00 0.00 0.00 2.75
882 976 9.435688 CTCCTTTGGAAAAACAAAATTATAGGG 57.564 33.333 0.00 0.00 39.60 3.53
893 987 8.770010 TCCTTTTATACTCCTTTGGAAAAACA 57.230 30.769 0.00 0.00 0.00 2.83
942 1036 0.244721 TATCGATCAGGCGCAGGATG 59.755 55.000 16.46 6.32 40.87 3.51
943 1037 0.969149 TTATCGATCAGGCGCAGGAT 59.031 50.000 10.83 11.64 0.00 3.24
986 1083 2.488153 GGACACATTCCCGGAAGAAAAG 59.512 50.000 0.73 0.00 38.70 2.27
998 1095 2.975536 TCCCGGACGGACACATTC 59.024 61.111 13.13 0.00 34.86 2.67
1119 1222 0.179134 CGATGTCGGTTGGGAGAGAC 60.179 60.000 0.00 0.00 35.37 3.36
1128 1231 1.814527 GAGGCCTACGATGTCGGTT 59.185 57.895 4.42 0.00 44.95 4.44
1158 1261 4.681978 ACGTCCTCGGCCAGCAAC 62.682 66.667 2.24 0.00 41.85 4.17
1166 1269 1.375098 GAGGTAGTCCACGTCCTCGG 61.375 65.000 3.26 0.00 41.85 4.63
1242 1348 0.823356 GCTGTGGTTTTCTCAGGGCA 60.823 55.000 0.00 0.00 0.00 5.36
1315 1427 2.885861 GGTGATCTCGCCGTCACT 59.114 61.111 6.34 0.00 43.23 3.41
1366 1478 2.444895 GAGGTCAGGGAGGCGGAT 60.445 66.667 0.00 0.00 0.00 4.18
1402 1514 4.070552 GAGGCCGTCGGTGAAGCT 62.071 66.667 13.94 0.00 0.00 3.74
1482 1594 4.658786 AGGGGCGGGAGTTGGACT 62.659 66.667 0.00 0.00 0.00 3.85
1517 1629 4.712476 AGCTTCTCGATCCTTAATTGCAT 58.288 39.130 0.00 0.00 0.00 3.96
1521 1633 5.606348 ACAGAGCTTCTCGATCCTTAATT 57.394 39.130 0.00 0.00 35.36 1.40
1530 1642 0.961753 TGCTGAACAGAGCTTCTCGA 59.038 50.000 5.97 0.00 39.90 4.04
1639 1754 3.073735 CTCCCAGCTCAGTCGGCT 61.074 66.667 0.00 0.00 41.07 5.52
1644 1759 0.908198 GAATGACCTCCCAGCTCAGT 59.092 55.000 0.00 0.00 0.00 3.41
1650 1765 1.409241 CCATGGTGAATGACCTCCCAG 60.409 57.143 2.57 0.00 46.32 4.45
1784 1899 3.135056 GACGGGTCGGCTAGCGAAT 62.135 63.158 9.00 0.00 0.00 3.34
1832 1947 4.284860 CGAGCATCATCCGCCCGA 62.285 66.667 0.00 0.00 33.17 5.14
1859 1974 0.327924 TGCCCTGTCATCGTTTCCAT 59.672 50.000 0.00 0.00 0.00 3.41
1881 1996 3.782523 AGATCCTGAAGGCATACTTTGGA 59.217 43.478 0.00 0.00 42.29 3.53
1953 2068 1.593196 TGAGAAACAAAGCCCGACTG 58.407 50.000 0.00 0.00 0.00 3.51
1956 2071 1.673920 GTGTTGAGAAACAAAGCCCGA 59.326 47.619 0.00 0.00 40.36 5.14
1976 2091 2.484417 GGGACACACAGGCATCTATCAG 60.484 54.545 0.00 0.00 0.00 2.90
1980 2095 0.613572 TCGGGACACACAGGCATCTA 60.614 55.000 0.00 0.00 0.00 1.98
2021 2136 5.882557 ACAGAGAAATGAACCGAATTGCTAT 59.117 36.000 0.00 0.00 0.00 2.97
2022 2137 5.122239 CACAGAGAAATGAACCGAATTGCTA 59.878 40.000 0.00 0.00 0.00 3.49
2035 2150 1.402456 GCTGCTTGGCACAGAGAAATG 60.402 52.381 9.12 0.00 42.39 2.32
2070 2185 3.917400 GGACAACCCACTCGACAGAGAA 61.917 54.545 2.23 0.00 46.94 2.87
2084 2199 2.663196 CCAGGTCCTCGGACAACC 59.337 66.667 17.21 1.55 46.20 3.77
2085 2200 2.047179 GCCAGGTCCTCGGACAAC 60.047 66.667 17.21 1.74 46.20 3.32
2106 2221 1.214589 GTCGTGTATCCGGCACAGT 59.785 57.895 8.77 0.00 36.71 3.55
2114 2229 2.693591 TCCTCCTTCATGTCGTGTATCC 59.306 50.000 0.00 0.00 0.00 2.59
2170 2285 5.973651 TTGCAATACGTGAGAAGATGATC 57.026 39.130 0.00 0.00 0.00 2.92
2236 2351 5.966742 TCCTCGAATGAGTCTGGTATATG 57.033 43.478 0.00 0.00 40.85 1.78
2254 2369 7.393515 TGCCTTTATTTTCTCCTTTAGTTCCTC 59.606 37.037 0.00 0.00 0.00 3.71
2266 2381 7.370383 TGAGAACATTGTGCCTTTATTTTCTC 58.630 34.615 0.00 0.00 36.41 2.87
2283 2398 2.485426 CGGAATGTGCACTTGAGAACAT 59.515 45.455 19.41 0.00 34.79 2.71
2350 2471 7.383843 GTGAAGAAAGTTTTGTTTTCCACTTGA 59.616 33.333 0.00 0.00 35.62 3.02
2351 2472 7.170658 TGTGAAGAAAGTTTTGTTTTCCACTTG 59.829 33.333 0.00 0.00 35.62 3.16
2353 2474 6.754193 TGTGAAGAAAGTTTTGTTTTCCACT 58.246 32.000 0.00 0.00 35.62 4.00
2356 2477 6.866248 TGTCTGTGAAGAAAGTTTTGTTTTCC 59.134 34.615 0.00 0.00 35.62 3.13
2362 2483 6.428385 AGTCTGTCTGTGAAGAAAGTTTTG 57.572 37.500 0.00 0.00 0.00 2.44
2463 2584 7.934855 AGAGCAAGACAACATTGAGATAAAT 57.065 32.000 0.00 0.00 0.00 1.40
2470 2591 5.833406 TTGAAAGAGCAAGACAACATTGA 57.167 34.783 0.00 0.00 0.00 2.57
2474 2595 6.024552 AGTTTTTGAAAGAGCAAGACAACA 57.975 33.333 0.00 0.00 0.00 3.33
2475 2596 6.325596 AGAGTTTTTGAAAGAGCAAGACAAC 58.674 36.000 0.00 0.00 0.00 3.32
2477 2598 5.882557 AGAGAGTTTTTGAAAGAGCAAGACA 59.117 36.000 0.00 0.00 0.00 3.41
2500 2621 6.929625 TGACTCCACTTCTTCAAGAGAATAG 58.070 40.000 0.00 0.00 43.23 1.73
2502 2623 5.815233 TGACTCCACTTCTTCAAGAGAAT 57.185 39.130 0.00 0.00 43.23 2.40
2512 2633 5.221722 TGTCTGCTAAAATGACTCCACTTCT 60.222 40.000 0.00 0.00 0.00 2.85
2560 2681 2.202783 GACCAATGCGGCAATGCC 60.203 61.111 15.52 15.52 46.75 4.40
2639 2760 2.906389 AGGCAAACAGAGTGGTGATCTA 59.094 45.455 0.00 0.00 0.00 1.98
2673 2795 8.638629 AGGTAATAGCGTCTATATCAAACTCT 57.361 34.615 0.74 0.00 0.00 3.24
2688 2810 9.944663 TTATATTTTGAAGCAAAGGTAATAGCG 57.055 29.630 0.00 0.00 34.72 4.26
2711 2833 9.025041 CCTTTGATTCCTACCAAAAAGTCTTAT 57.975 33.333 0.00 0.00 32.63 1.73
2712 2834 8.002459 ACCTTTGATTCCTACCAAAAAGTCTTA 58.998 33.333 0.00 0.00 32.63 2.10
2713 2835 6.839134 ACCTTTGATTCCTACCAAAAAGTCTT 59.161 34.615 0.00 0.00 32.63 3.01
2714 2836 6.373759 ACCTTTGATTCCTACCAAAAAGTCT 58.626 36.000 0.00 0.00 32.63 3.24
2715 2837 6.650427 ACCTTTGATTCCTACCAAAAAGTC 57.350 37.500 0.00 0.00 32.63 3.01
2716 2838 7.295340 ACTACCTTTGATTCCTACCAAAAAGT 58.705 34.615 0.00 0.00 32.63 2.66
2717 2839 7.761038 ACTACCTTTGATTCCTACCAAAAAG 57.239 36.000 0.00 0.00 32.63 2.27
2718 2840 8.442374 AGTACTACCTTTGATTCCTACCAAAAA 58.558 33.333 0.00 0.00 32.63 1.94
2719 2841 7.981142 AGTACTACCTTTGATTCCTACCAAAA 58.019 34.615 0.00 0.00 32.63 2.44
2720 2842 7.563724 AGTACTACCTTTGATTCCTACCAAA 57.436 36.000 0.00 0.00 0.00 3.28
2721 2843 8.669055 TTAGTACTACCTTTGATTCCTACCAA 57.331 34.615 0.91 0.00 0.00 3.67
2722 2844 8.669055 TTTAGTACTACCTTTGATTCCTACCA 57.331 34.615 0.91 0.00 0.00 3.25
2735 2857 8.414778 GCAACTCATCACTATTTAGTACTACCT 58.585 37.037 0.91 0.00 34.13 3.08
2736 2858 8.195436 TGCAACTCATCACTATTTAGTACTACC 58.805 37.037 0.91 0.00 34.13 3.18
2737 2859 9.751542 ATGCAACTCATCACTATTTAGTACTAC 57.248 33.333 0.91 0.00 34.13 2.73
2738 2860 9.750125 CATGCAACTCATCACTATTTAGTACTA 57.250 33.333 0.00 0.00 31.73 1.82
2739 2861 8.478066 TCATGCAACTCATCACTATTTAGTACT 58.522 33.333 0.00 0.00 31.73 2.73
2740 2862 8.648557 TCATGCAACTCATCACTATTTAGTAC 57.351 34.615 0.00 0.00 31.73 2.73
2741 2863 9.665719 TTTCATGCAACTCATCACTATTTAGTA 57.334 29.630 0.00 0.00 31.73 1.82
2742 2864 8.565896 TTTCATGCAACTCATCACTATTTAGT 57.434 30.769 0.00 0.00 32.64 2.24
2743 2865 9.282247 GTTTTCATGCAACTCATCACTATTTAG 57.718 33.333 0.00 0.00 31.79 1.85
2744 2866 9.013229 AGTTTTCATGCAACTCATCACTATTTA 57.987 29.630 0.00 0.00 31.79 1.40
2745 2867 7.889469 AGTTTTCATGCAACTCATCACTATTT 58.111 30.769 0.00 0.00 31.79 1.40
2746 2868 7.458409 AGTTTTCATGCAACTCATCACTATT 57.542 32.000 0.00 0.00 31.79 1.73
2747 2869 7.458409 AAGTTTTCATGCAACTCATCACTAT 57.542 32.000 9.75 0.00 33.12 2.12
2748 2870 6.882610 AAGTTTTCATGCAACTCATCACTA 57.117 33.333 9.75 0.00 33.12 2.74
2749 2871 5.779529 AAGTTTTCATGCAACTCATCACT 57.220 34.783 9.75 0.00 33.12 3.41
2750 2872 5.176223 CCAAAGTTTTCATGCAACTCATCAC 59.824 40.000 9.75 0.00 33.12 3.06
2751 2873 5.163426 ACCAAAGTTTTCATGCAACTCATCA 60.163 36.000 9.75 0.00 33.12 3.07
2752 2874 5.291971 ACCAAAGTTTTCATGCAACTCATC 58.708 37.500 9.75 0.00 33.12 2.92
2753 2875 5.280654 ACCAAAGTTTTCATGCAACTCAT 57.719 34.783 9.75 1.94 33.12 2.90
2754 2876 4.734398 ACCAAAGTTTTCATGCAACTCA 57.266 36.364 9.75 0.00 33.12 3.41
2755 2877 4.260334 GCAACCAAAGTTTTCATGCAACTC 60.260 41.667 9.75 0.00 33.12 3.01
2756 2878 3.622612 GCAACCAAAGTTTTCATGCAACT 59.377 39.130 10.02 4.69 35.94 3.16
2757 2879 3.373439 TGCAACCAAAGTTTTCATGCAAC 59.627 39.130 13.62 0.00 32.45 4.17
2758 2880 3.603532 TGCAACCAAAGTTTTCATGCAA 58.396 36.364 13.62 0.00 32.45 4.08
2759 2881 3.257469 TGCAACCAAAGTTTTCATGCA 57.743 38.095 12.50 12.50 32.45 3.96
2760 2882 3.002553 CCTTGCAACCAAAGTTTTCATGC 59.997 43.478 0.00 8.57 32.45 4.06
2761 2883 3.560896 CCCTTGCAACCAAAGTTTTCATG 59.439 43.478 0.00 0.00 32.45 3.07
2762 2884 3.199727 ACCCTTGCAACCAAAGTTTTCAT 59.800 39.130 0.00 0.00 32.45 2.57
2763 2885 2.569404 ACCCTTGCAACCAAAGTTTTCA 59.431 40.909 0.00 0.00 32.45 2.69
2764 2886 3.260475 ACCCTTGCAACCAAAGTTTTC 57.740 42.857 0.00 0.00 32.45 2.29
2765 2887 4.828072 TTACCCTTGCAACCAAAGTTTT 57.172 36.364 0.00 0.00 32.45 2.43
2766 2888 4.828072 TTTACCCTTGCAACCAAAGTTT 57.172 36.364 0.00 0.00 32.45 2.66
2767 2889 4.020128 TGTTTTACCCTTGCAACCAAAGTT 60.020 37.500 0.00 0.00 36.33 2.66
2768 2890 3.515901 TGTTTTACCCTTGCAACCAAAGT 59.484 39.130 0.00 0.00 0.00 2.66
2769 2891 4.130286 TGTTTTACCCTTGCAACCAAAG 57.870 40.909 0.00 0.00 0.00 2.77
2770 2892 4.080863 ACATGTTTTACCCTTGCAACCAAA 60.081 37.500 0.00 0.00 0.00 3.28
2771 2893 3.452627 ACATGTTTTACCCTTGCAACCAA 59.547 39.130 0.00 0.00 0.00 3.67
2772 2894 3.034635 ACATGTTTTACCCTTGCAACCA 58.965 40.909 0.00 0.00 0.00 3.67
2773 2895 3.744238 ACATGTTTTACCCTTGCAACC 57.256 42.857 0.00 0.00 0.00 3.77
2774 2896 4.438148 ACAACATGTTTTACCCTTGCAAC 58.562 39.130 8.77 0.00 0.00 4.17
2775 2897 4.404073 AGACAACATGTTTTACCCTTGCAA 59.596 37.500 8.77 0.00 0.00 4.08
2776 2898 3.957497 AGACAACATGTTTTACCCTTGCA 59.043 39.130 8.77 0.00 0.00 4.08
2777 2899 4.037446 TGAGACAACATGTTTTACCCTTGC 59.963 41.667 8.77 0.00 0.00 4.01
2778 2900 5.766150 TGAGACAACATGTTTTACCCTTG 57.234 39.130 8.77 0.00 0.00 3.61
2779 2901 6.976934 ATTGAGACAACATGTTTTACCCTT 57.023 33.333 8.77 0.00 0.00 3.95
2780 2902 7.231467 AGTATTGAGACAACATGTTTTACCCT 58.769 34.615 8.77 1.70 0.00 4.34
2781 2903 7.448748 AGTATTGAGACAACATGTTTTACCC 57.551 36.000 8.77 0.00 0.00 3.69
2785 2907 9.120538 ACACTAAGTATTGAGACAACATGTTTT 57.879 29.630 8.77 1.70 0.00 2.43
2786 2908 8.677148 ACACTAAGTATTGAGACAACATGTTT 57.323 30.769 8.77 0.41 0.00 2.83
2787 2909 7.116376 CGACACTAAGTATTGAGACAACATGTT 59.884 37.037 4.92 4.92 0.00 2.71
2788 2910 6.586463 CGACACTAAGTATTGAGACAACATGT 59.414 38.462 0.00 0.00 0.00 3.21
2789 2911 6.586463 ACGACACTAAGTATTGAGACAACATG 59.414 38.462 0.00 0.00 0.00 3.21
2790 2912 6.586463 CACGACACTAAGTATTGAGACAACAT 59.414 38.462 0.00 0.00 0.00 2.71
2791 2913 5.918576 CACGACACTAAGTATTGAGACAACA 59.081 40.000 0.00 0.00 0.00 3.33
2792 2914 5.919141 ACACGACACTAAGTATTGAGACAAC 59.081 40.000 0.00 0.00 0.00 3.32
2793 2915 6.080648 ACACGACACTAAGTATTGAGACAA 57.919 37.500 0.00 0.00 0.00 3.18
2794 2916 5.700722 ACACGACACTAAGTATTGAGACA 57.299 39.130 0.00 0.00 0.00 3.41
2795 2917 6.147581 TCAACACGACACTAAGTATTGAGAC 58.852 40.000 0.00 0.00 0.00 3.36
2796 2918 6.321848 TCAACACGACACTAAGTATTGAGA 57.678 37.500 0.00 0.00 0.00 3.27
2797 2919 8.683550 TTATCAACACGACACTAAGTATTGAG 57.316 34.615 0.00 0.00 0.00 3.02
2798 2920 9.647797 ATTTATCAACACGACACTAAGTATTGA 57.352 29.630 0.00 0.00 0.00 2.57
2803 2925 9.871238 AATCTATTTATCAACACGACACTAAGT 57.129 29.630 0.00 0.00 0.00 2.24
2805 2927 9.863845 TCAATCTATTTATCAACACGACACTAA 57.136 29.630 0.00 0.00 0.00 2.24
2806 2928 9.863845 TTCAATCTATTTATCAACACGACACTA 57.136 29.630 0.00 0.00 0.00 2.74
2807 2929 8.771920 TTCAATCTATTTATCAACACGACACT 57.228 30.769 0.00 0.00 0.00 3.55
2808 2930 9.478019 CTTTCAATCTATTTATCAACACGACAC 57.522 33.333 0.00 0.00 0.00 3.67
2809 2931 9.214957 ACTTTCAATCTATTTATCAACACGACA 57.785 29.630 0.00 0.00 0.00 4.35
2846 2968 8.094798 TCAATGCGACACTAAGTATTCTTTTT 57.905 30.769 0.00 0.00 35.36 1.94
2847 2969 7.667043 TCAATGCGACACTAAGTATTCTTTT 57.333 32.000 0.00 0.00 35.36 2.27
2848 2970 7.549134 TCATCAATGCGACACTAAGTATTCTTT 59.451 33.333 0.00 0.00 35.36 2.52
2849 2971 7.041721 TCATCAATGCGACACTAAGTATTCTT 58.958 34.615 0.00 0.00 37.65 2.52
2850 2972 6.573434 TCATCAATGCGACACTAAGTATTCT 58.427 36.000 0.00 0.00 0.00 2.40
2851 2973 6.828502 TCATCAATGCGACACTAAGTATTC 57.171 37.500 0.00 0.00 0.00 1.75
2852 2974 7.792374 ATTCATCAATGCGACACTAAGTATT 57.208 32.000 0.00 0.00 0.00 1.89
2855 2977 9.494271 AATATATTCATCAATGCGACACTAAGT 57.506 29.630 0.00 0.00 0.00 2.24
2856 2978 9.750882 CAATATATTCATCAATGCGACACTAAG 57.249 33.333 0.00 0.00 0.00 2.18
2857 2979 8.720562 CCAATATATTCATCAATGCGACACTAA 58.279 33.333 0.00 0.00 0.00 2.24
2858 2980 8.093927 TCCAATATATTCATCAATGCGACACTA 58.906 33.333 0.00 0.00 0.00 2.74
2859 2981 6.936335 TCCAATATATTCATCAATGCGACACT 59.064 34.615 0.00 0.00 0.00 3.55
2860 2982 7.132694 TCCAATATATTCATCAATGCGACAC 57.867 36.000 0.00 0.00 0.00 3.67
2861 2983 7.445096 ACTTCCAATATATTCATCAATGCGACA 59.555 33.333 0.00 0.00 0.00 4.35
2862 2984 7.810658 ACTTCCAATATATTCATCAATGCGAC 58.189 34.615 0.00 0.00 0.00 5.19
2863 2985 7.984422 ACTTCCAATATATTCATCAATGCGA 57.016 32.000 0.00 0.00 0.00 5.10
2864 2986 9.467258 AAAACTTCCAATATATTCATCAATGCG 57.533 29.630 0.00 0.00 0.00 4.73
2903 3025 0.320683 GCGGCCCAAGCATTCTTTTT 60.321 50.000 0.00 0.00 42.56 1.94
2904 3026 1.293179 GCGGCCCAAGCATTCTTTT 59.707 52.632 0.00 0.00 42.56 2.27
2905 3027 2.973082 GCGGCCCAAGCATTCTTT 59.027 55.556 0.00 0.00 42.56 2.52
2906 3028 3.443045 CGCGGCCCAAGCATTCTT 61.443 61.111 0.00 0.00 42.56 2.52
2907 3029 4.722700 ACGCGGCCCAAGCATTCT 62.723 61.111 12.47 0.00 42.56 2.40
2908 3030 3.683587 GAACGCGGCCCAAGCATTC 62.684 63.158 12.47 0.00 42.56 2.67
2909 3031 3.747976 GAACGCGGCCCAAGCATT 61.748 61.111 12.47 0.00 42.56 3.56
2920 3042 4.856607 GGAGAGGAGCCGAACGCG 62.857 72.222 3.53 3.53 44.76 6.01
2927 3049 4.851214 AGGGAGCGGAGAGGAGCC 62.851 72.222 0.00 0.00 0.00 4.70
2928 3050 3.535962 CAGGGAGCGGAGAGGAGC 61.536 72.222 0.00 0.00 0.00 4.70
2929 3051 2.837291 CCAGGGAGCGGAGAGGAG 60.837 72.222 0.00 0.00 0.00 3.69
2930 3052 3.347590 TCCAGGGAGCGGAGAGGA 61.348 66.667 0.00 0.00 0.00 3.71
2931 3053 3.151022 GTCCAGGGAGCGGAGAGG 61.151 72.222 0.00 0.00 31.65 3.69
2932 3054 2.363018 TGTCCAGGGAGCGGAGAG 60.363 66.667 0.00 0.00 31.65 3.20
2933 3055 2.363018 CTGTCCAGGGAGCGGAGA 60.363 66.667 0.00 0.00 31.65 3.71
2934 3056 4.154347 GCTGTCCAGGGAGCGGAG 62.154 72.222 0.00 0.00 31.65 4.63
2938 3060 4.828925 GAGCGCTGTCCAGGGAGC 62.829 72.222 18.48 0.00 43.22 4.70
2939 3061 4.154347 GGAGCGCTGTCCAGGGAG 62.154 72.222 18.48 0.00 43.22 4.30
2957 3079 3.827898 GGAGACTGGTCCGCTCCG 61.828 72.222 8.89 0.00 38.88 4.63
2958 3080 2.680352 TGGAGACTGGTCCGCTCC 60.680 66.667 15.05 15.05 46.60 4.70
2959 3081 2.888863 CTGGAGACTGGTCCGCTC 59.111 66.667 0.00 0.00 39.81 5.03
2960 3082 2.500815 TAGCTGGAGACTGGTCCGCT 62.501 60.000 15.92 15.92 43.88 5.52
2961 3083 1.605058 TTAGCTGGAGACTGGTCCGC 61.605 60.000 0.00 0.00 39.81 5.54
2962 3084 1.115467 ATTAGCTGGAGACTGGTCCG 58.885 55.000 0.00 0.00 39.81 4.79
2963 3085 3.636153 AAATTAGCTGGAGACTGGTCC 57.364 47.619 0.00 0.00 40.64 4.46
2964 3086 6.094186 CCTTAAAAATTAGCTGGAGACTGGTC 59.906 42.308 0.00 0.00 40.64 4.02
2965 3087 5.946377 CCTTAAAAATTAGCTGGAGACTGGT 59.054 40.000 0.00 0.00 42.88 4.00
2966 3088 6.180472 TCCTTAAAAATTAGCTGGAGACTGG 58.820 40.000 0.00 0.00 0.00 4.00
2967 3089 6.183360 GCTCCTTAAAAATTAGCTGGAGACTG 60.183 42.308 13.54 0.00 41.31 3.51
2968 3090 5.883115 GCTCCTTAAAAATTAGCTGGAGACT 59.117 40.000 13.54 0.00 41.31 3.24
2969 3091 5.220681 CGCTCCTTAAAAATTAGCTGGAGAC 60.221 44.000 13.54 5.59 41.31 3.36
2970 3092 4.876107 CGCTCCTTAAAAATTAGCTGGAGA 59.124 41.667 13.54 0.00 41.31 3.71
2971 3093 4.035675 CCGCTCCTTAAAAATTAGCTGGAG 59.964 45.833 0.00 0.99 41.61 3.86
2972 3094 3.945285 CCGCTCCTTAAAAATTAGCTGGA 59.055 43.478 0.00 0.00 32.37 3.86
2973 3095 3.489229 GCCGCTCCTTAAAAATTAGCTGG 60.489 47.826 0.00 0.00 33.19 4.85
2974 3096 3.378427 AGCCGCTCCTTAAAAATTAGCTG 59.622 43.478 0.00 0.00 0.00 4.24
2975 3097 3.621558 AGCCGCTCCTTAAAAATTAGCT 58.378 40.909 0.00 0.00 0.00 3.32
2976 3098 5.494632 TTAGCCGCTCCTTAAAAATTAGC 57.505 39.130 0.00 0.00 0.00 3.09
2977 3099 6.750501 GGTTTTAGCCGCTCCTTAAAAATTAG 59.249 38.462 0.00 0.00 0.00 1.73
2978 3100 6.350361 GGGTTTTAGCCGCTCCTTAAAAATTA 60.350 38.462 0.00 0.00 0.00 1.40
2979 3101 5.475719 GGTTTTAGCCGCTCCTTAAAAATT 58.524 37.500 0.00 0.00 0.00 1.82
2980 3102 4.081862 GGGTTTTAGCCGCTCCTTAAAAAT 60.082 41.667 0.00 0.00 0.00 1.82
2981 3103 3.256383 GGGTTTTAGCCGCTCCTTAAAAA 59.744 43.478 0.00 0.00 0.00 1.94
2982 3104 2.821378 GGGTTTTAGCCGCTCCTTAAAA 59.179 45.455 0.00 0.00 0.00 1.52
2983 3105 2.224818 TGGGTTTTAGCCGCTCCTTAAA 60.225 45.455 0.00 0.00 38.98 1.52
2984 3106 1.351683 TGGGTTTTAGCCGCTCCTTAA 59.648 47.619 0.00 0.00 38.98 1.85
2985 3107 0.985760 TGGGTTTTAGCCGCTCCTTA 59.014 50.000 0.00 0.00 38.98 2.69
2986 3108 0.322546 CTGGGTTTTAGCCGCTCCTT 60.323 55.000 0.00 0.00 38.98 3.36
2987 3109 1.299976 CTGGGTTTTAGCCGCTCCT 59.700 57.895 0.00 0.00 38.98 3.69
2988 3110 2.407428 GCTGGGTTTTAGCCGCTCC 61.407 63.158 0.00 0.00 38.98 4.70
2989 3111 1.369839 GAGCTGGGTTTTAGCCGCTC 61.370 60.000 18.40 18.40 46.28 5.03
2990 3112 1.377333 GAGCTGGGTTTTAGCCGCT 60.377 57.895 11.84 11.84 43.99 5.52
2991 3113 0.107848 TAGAGCTGGGTTTTAGCCGC 60.108 55.000 0.00 0.00 42.07 6.53
2992 3114 1.066430 TGTAGAGCTGGGTTTTAGCCG 60.066 52.381 0.00 0.00 42.07 5.52
2993 3115 2.633488 CTGTAGAGCTGGGTTTTAGCC 58.367 52.381 0.00 0.00 42.07 3.93
2994 3116 2.010497 GCTGTAGAGCTGGGTTTTAGC 58.990 52.381 4.27 0.00 42.52 3.09
3005 3127 1.316706 ACTCCGTGGAGCTGTAGAGC 61.317 60.000 15.80 3.08 45.54 4.09
3006 3128 0.736053 GACTCCGTGGAGCTGTAGAG 59.264 60.000 15.80 0.00 45.54 2.43
3007 3129 0.037734 TGACTCCGTGGAGCTGTAGA 59.962 55.000 15.80 0.00 45.54 2.59
3008 3130 0.453793 CTGACTCCGTGGAGCTGTAG 59.546 60.000 15.80 5.55 45.54 2.74
3009 3131 1.595993 GCTGACTCCGTGGAGCTGTA 61.596 60.000 15.80 0.00 45.54 2.74
3010 3132 2.936912 GCTGACTCCGTGGAGCTGT 61.937 63.158 15.80 0.00 45.54 4.40
3011 3133 2.125753 GCTGACTCCGTGGAGCTG 60.126 66.667 15.80 12.62 45.54 4.24
3012 3134 2.283532 AGCTGACTCCGTGGAGCT 60.284 61.111 15.80 5.22 45.54 4.09
3013 3135 2.183046 GAGCTGACTCCGTGGAGC 59.817 66.667 15.80 9.22 45.54 4.70
3021 3143 2.716017 CCCTCCGTGGAGCTGACTC 61.716 68.421 10.53 0.00 40.69 3.36
3022 3144 2.522198 ATCCCTCCGTGGAGCTGACT 62.522 60.000 10.53 0.00 40.69 3.41
3023 3145 1.617947 AATCCCTCCGTGGAGCTGAC 61.618 60.000 10.53 0.00 40.69 3.51
3024 3146 1.306141 AATCCCTCCGTGGAGCTGA 60.306 57.895 10.53 9.24 40.69 4.26
3025 3147 1.144936 GAATCCCTCCGTGGAGCTG 59.855 63.158 10.53 4.08 40.69 4.24
3026 3148 2.066999 GGAATCCCTCCGTGGAGCT 61.067 63.158 10.53 0.00 40.69 4.09
3027 3149 2.506472 GGAATCCCTCCGTGGAGC 59.494 66.667 10.53 0.00 40.69 4.70
3034 3156 1.076995 CCCCGTTTGGAATCCCTCC 60.077 63.158 0.00 0.00 45.64 4.30
3035 3157 1.753078 GCCCCGTTTGGAATCCCTC 60.753 63.158 0.00 0.00 37.49 4.30
3036 3158 2.359011 GCCCCGTTTGGAATCCCT 59.641 61.111 0.00 0.00 37.49 4.20
3037 3159 2.758327 GGCCCCGTTTGGAATCCC 60.758 66.667 0.00 0.00 37.49 3.85
3038 3160 0.033894 TAAGGCCCCGTTTGGAATCC 60.034 55.000 0.00 0.00 37.49 3.01
3039 3161 1.340697 ACTAAGGCCCCGTTTGGAATC 60.341 52.381 0.00 0.00 37.49 2.52
3040 3162 0.702316 ACTAAGGCCCCGTTTGGAAT 59.298 50.000 0.00 0.00 37.49 3.01
3041 3163 0.250989 CACTAAGGCCCCGTTTGGAA 60.251 55.000 0.00 0.00 37.49 3.53
3042 3164 1.377229 CACTAAGGCCCCGTTTGGA 59.623 57.895 0.00 0.00 37.49 3.53
3043 3165 0.958876 GACACTAAGGCCCCGTTTGG 60.959 60.000 0.00 0.00 0.00 3.28
3044 3166 0.250553 TGACACTAAGGCCCCGTTTG 60.251 55.000 0.00 0.00 0.00 2.93
3045 3167 0.250597 GTGACACTAAGGCCCCGTTT 60.251 55.000 0.00 0.00 0.00 3.60
3046 3168 1.373812 GTGACACTAAGGCCCCGTT 59.626 57.895 0.00 0.00 0.00 4.44
3047 3169 2.939261 CGTGACACTAAGGCCCCGT 61.939 63.158 0.00 0.00 0.00 5.28
3048 3170 2.125673 CGTGACACTAAGGCCCCG 60.126 66.667 0.00 0.00 0.00 5.73
3049 3171 0.953960 CAACGTGACACTAAGGCCCC 60.954 60.000 0.00 0.00 0.00 5.80
3050 3172 0.250166 ACAACGTGACACTAAGGCCC 60.250 55.000 0.00 0.00 0.00 5.80
3051 3173 1.529865 GAACAACGTGACACTAAGGCC 59.470 52.381 3.68 0.00 0.00 5.19
3052 3174 2.480845 AGAACAACGTGACACTAAGGC 58.519 47.619 3.68 0.00 0.00 4.35
3053 3175 5.924254 TGATAAGAACAACGTGACACTAAGG 59.076 40.000 3.68 0.00 0.00 2.69
3054 3176 7.328493 TCATGATAAGAACAACGTGACACTAAG 59.672 37.037 3.68 0.00 0.00 2.18
3055 3177 7.149307 TCATGATAAGAACAACGTGACACTAA 58.851 34.615 3.68 0.00 0.00 2.24
3056 3178 6.683715 TCATGATAAGAACAACGTGACACTA 58.316 36.000 3.68 0.00 0.00 2.74
3057 3179 5.538118 TCATGATAAGAACAACGTGACACT 58.462 37.500 3.68 0.00 0.00 3.55
3058 3180 5.839262 TCATGATAAGAACAACGTGACAC 57.161 39.130 0.00 0.00 0.00 3.67
3059 3181 5.931724 ACATCATGATAAGAACAACGTGACA 59.068 36.000 8.15 0.00 32.41 3.58
3060 3182 6.408858 ACATCATGATAAGAACAACGTGAC 57.591 37.500 8.15 0.00 32.41 3.67
3061 3183 6.128309 CCAACATCATGATAAGAACAACGTGA 60.128 38.462 8.15 0.00 33.77 4.35
3062 3184 6.023435 CCAACATCATGATAAGAACAACGTG 58.977 40.000 8.15 0.00 0.00 4.49
3063 3185 5.937540 TCCAACATCATGATAAGAACAACGT 59.062 36.000 8.15 0.00 0.00 3.99
3064 3186 6.421377 TCCAACATCATGATAAGAACAACG 57.579 37.500 8.15 0.00 0.00 4.10
3065 3187 6.127925 TGCTCCAACATCATGATAAGAACAAC 60.128 38.462 8.15 0.00 0.00 3.32
3066 3188 5.945191 TGCTCCAACATCATGATAAGAACAA 59.055 36.000 8.15 0.00 0.00 2.83
3067 3189 5.355071 GTGCTCCAACATCATGATAAGAACA 59.645 40.000 8.15 2.19 0.00 3.18
3068 3190 5.220931 GGTGCTCCAACATCATGATAAGAAC 60.221 44.000 8.15 5.95 0.00 3.01
3069 3191 4.883585 GGTGCTCCAACATCATGATAAGAA 59.116 41.667 8.15 0.00 0.00 2.52
3070 3192 4.454678 GGTGCTCCAACATCATGATAAGA 58.545 43.478 8.15 2.26 0.00 2.10
3071 3193 3.567164 GGGTGCTCCAACATCATGATAAG 59.433 47.826 8.15 0.00 35.00 1.73
3072 3194 3.554934 GGGTGCTCCAACATCATGATAA 58.445 45.455 8.15 0.00 35.00 1.75
3073 3195 2.485302 CGGGTGCTCCAACATCATGATA 60.485 50.000 8.15 0.00 34.36 2.15
3074 3196 1.748244 CGGGTGCTCCAACATCATGAT 60.748 52.381 1.18 1.18 34.36 2.45
3075 3197 0.392863 CGGGTGCTCCAACATCATGA 60.393 55.000 7.20 0.00 34.36 3.07
3076 3198 1.996786 GCGGGTGCTCCAACATCATG 61.997 60.000 7.20 0.00 38.39 3.07
3077 3199 1.750399 GCGGGTGCTCCAACATCAT 60.750 57.895 7.20 0.00 38.39 2.45
3078 3200 2.359850 GCGGGTGCTCCAACATCA 60.360 61.111 7.20 0.00 38.39 3.07
3079 3201 3.134127 GGCGGGTGCTCCAACATC 61.134 66.667 7.20 0.00 42.25 3.06
3080 3202 3.650950 AGGCGGGTGCTCCAACAT 61.651 61.111 7.20 0.00 42.25 2.71
3081 3203 4.641645 CAGGCGGGTGCTCCAACA 62.642 66.667 7.20 0.00 42.25 3.33
3082 3204 4.329545 TCAGGCGGGTGCTCCAAC 62.330 66.667 7.20 0.00 42.25 3.77
3083 3205 4.020617 CTCAGGCGGGTGCTCCAA 62.021 66.667 7.20 0.00 42.25 3.53
3092 3214 4.760047 CGGTGAACCCTCAGGCGG 62.760 72.222 0.00 0.00 36.11 6.13
3096 3218 4.680237 TGCGCGGTGAACCCTCAG 62.680 66.667 8.83 0.00 30.14 3.35
3097 3219 4.680237 CTGCGCGGTGAACCCTCA 62.680 66.667 8.83 0.00 0.00 3.86
3101 3223 4.681978 ACTCCTGCGCGGTGAACC 62.682 66.667 16.49 0.00 0.00 3.62
3102 3224 3.414700 CACTCCTGCGCGGTGAAC 61.415 66.667 16.49 0.00 33.32 3.18
3147 3269 4.292178 GGGAGGCATCGGCGAGAG 62.292 72.222 17.22 11.85 42.47 3.20
3148 3270 3.430907 TAGGGAGGCATCGGCGAGA 62.431 63.158 17.22 0.00 42.47 4.04
3149 3271 2.912542 TAGGGAGGCATCGGCGAG 60.913 66.667 17.22 8.85 42.47 5.03
3150 3272 2.912542 CTAGGGAGGCATCGGCGA 60.913 66.667 13.87 13.87 42.47 5.54
3151 3273 4.671569 GCTAGGGAGGCATCGGCG 62.672 72.222 0.00 0.00 42.47 6.46
3152 3274 3.550431 TGCTAGGGAGGCATCGGC 61.550 66.667 0.00 0.00 34.56 5.54
3153 3275 2.093537 GAGTGCTAGGGAGGCATCGG 62.094 65.000 0.00 0.00 41.86 4.18
3154 3276 1.112315 AGAGTGCTAGGGAGGCATCG 61.112 60.000 0.00 0.00 41.86 3.84
3155 3277 0.392336 CAGAGTGCTAGGGAGGCATC 59.608 60.000 0.00 0.00 41.86 3.91
3156 3278 1.694133 GCAGAGTGCTAGGGAGGCAT 61.694 60.000 0.00 0.00 40.96 4.40
3157 3279 2.362369 GCAGAGTGCTAGGGAGGCA 61.362 63.158 0.00 0.00 40.96 4.75
3158 3280 2.503546 GCAGAGTGCTAGGGAGGC 59.496 66.667 0.00 0.00 40.96 4.70
3159 3281 2.811101 CGCAGAGTGCTAGGGAGG 59.189 66.667 0.00 0.00 42.25 4.30
3160 3282 2.105930 GCGCAGAGTGCTAGGGAG 59.894 66.667 0.30 0.00 42.25 4.30
3168 3290 2.356313 AACGGACAGCGCAGAGTG 60.356 61.111 11.47 0.29 0.00 3.51
3169 3291 2.049063 GAACGGACAGCGCAGAGT 60.049 61.111 11.47 4.73 0.00 3.24
3170 3292 2.811317 GGAACGGACAGCGCAGAG 60.811 66.667 11.47 0.64 0.00 3.35
3192 3314 4.496336 AGCATCCCAAGGAGCCGC 62.496 66.667 0.00 0.00 34.05 6.53
3193 3315 1.821332 GAAGCATCCCAAGGAGCCG 60.821 63.158 0.00 0.00 34.05 5.52
3194 3316 1.821332 CGAAGCATCCCAAGGAGCC 60.821 63.158 0.00 0.00 34.05 4.70
3195 3317 3.819188 CGAAGCATCCCAAGGAGC 58.181 61.111 0.00 0.00 34.05 4.70
3208 3330 1.803519 GCGTGGAGAGTCAGCGAAG 60.804 63.158 0.00 0.00 0.00 3.79
3209 3331 2.258591 GCGTGGAGAGTCAGCGAA 59.741 61.111 0.00 0.00 0.00 4.70
3210 3332 3.749064 GGCGTGGAGAGTCAGCGA 61.749 66.667 0.00 0.00 0.00 4.93
3211 3333 3.362399 ATGGCGTGGAGAGTCAGCG 62.362 63.158 0.00 0.00 0.00 5.18
3212 3334 1.520342 GATGGCGTGGAGAGTCAGC 60.520 63.158 0.00 0.00 0.00 4.26
3213 3335 1.142748 GGATGGCGTGGAGAGTCAG 59.857 63.158 0.00 0.00 0.00 3.51
3214 3336 2.710902 CGGATGGCGTGGAGAGTCA 61.711 63.158 0.00 0.00 0.00 3.41
3215 3337 1.739338 ATCGGATGGCGTGGAGAGTC 61.739 60.000 0.00 0.00 0.00 3.36
3216 3338 1.739338 GATCGGATGGCGTGGAGAGT 61.739 60.000 0.00 0.00 0.00 3.24
3217 3339 1.006805 GATCGGATGGCGTGGAGAG 60.007 63.158 0.00 0.00 0.00 3.20
3218 3340 1.455773 AGATCGGATGGCGTGGAGA 60.456 57.895 0.00 0.00 0.00 3.71
3219 3341 1.006805 GAGATCGGATGGCGTGGAG 60.007 63.158 0.00 0.00 0.00 3.86
3220 3342 1.455773 AGAGATCGGATGGCGTGGA 60.456 57.895 0.00 0.00 0.00 4.02
3221 3343 1.300465 CAGAGATCGGATGGCGTGG 60.300 63.158 0.00 0.00 0.00 4.94
3222 3344 1.953138 GCAGAGATCGGATGGCGTG 60.953 63.158 0.00 0.00 0.00 5.34
3223 3345 2.419198 GCAGAGATCGGATGGCGT 59.581 61.111 0.00 0.00 0.00 5.68
3224 3346 2.732468 CGCAGAGATCGGATGGCG 60.732 66.667 0.00 1.98 38.45 5.69
3246 3368 4.643387 AACAGGTCGGGTGCAGGC 62.643 66.667 0.00 0.00 0.00 4.85
3247 3369 1.515521 GAAAACAGGTCGGGTGCAGG 61.516 60.000 0.00 0.00 0.00 4.85
3248 3370 0.535102 AGAAAACAGGTCGGGTGCAG 60.535 55.000 0.00 0.00 0.00 4.41
3249 3371 0.106918 AAGAAAACAGGTCGGGTGCA 60.107 50.000 0.00 0.00 0.00 4.57
3250 3372 0.591659 GAAGAAAACAGGTCGGGTGC 59.408 55.000 0.00 0.00 0.00 5.01
3251 3373 1.873591 CAGAAGAAAACAGGTCGGGTG 59.126 52.381 0.00 0.00 0.00 4.61
3252 3374 1.202770 CCAGAAGAAAACAGGTCGGGT 60.203 52.381 0.00 0.00 0.00 5.28
3253 3375 1.523758 CCAGAAGAAAACAGGTCGGG 58.476 55.000 0.00 0.00 0.00 5.14
3254 3376 1.071699 TCCCAGAAGAAAACAGGTCGG 59.928 52.381 0.00 0.00 0.00 4.79
3255 3377 2.543777 TCCCAGAAGAAAACAGGTCG 57.456 50.000 0.00 0.00 0.00 4.79
3256 3378 3.551846 TGTTCCCAGAAGAAAACAGGTC 58.448 45.455 0.00 0.00 0.00 3.85
3257 3379 3.662759 TGTTCCCAGAAGAAAACAGGT 57.337 42.857 0.00 0.00 0.00 4.00
3258 3380 4.584325 TCATTGTTCCCAGAAGAAAACAGG 59.416 41.667 0.00 0.00 33.54 4.00
3259 3381 5.523369 GTCATTGTTCCCAGAAGAAAACAG 58.477 41.667 0.00 0.00 33.54 3.16
3260 3382 4.036262 CGTCATTGTTCCCAGAAGAAAACA 59.964 41.667 0.00 0.00 0.00 2.83
3261 3383 4.537015 CGTCATTGTTCCCAGAAGAAAAC 58.463 43.478 0.00 0.00 0.00 2.43
3262 3384 3.004315 GCGTCATTGTTCCCAGAAGAAAA 59.996 43.478 0.00 0.00 0.00 2.29
3263 3385 2.552315 GCGTCATTGTTCCCAGAAGAAA 59.448 45.455 0.00 0.00 0.00 2.52
3264 3386 2.151202 GCGTCATTGTTCCCAGAAGAA 58.849 47.619 0.00 0.00 0.00 2.52
3265 3387 1.808411 GCGTCATTGTTCCCAGAAGA 58.192 50.000 0.00 0.00 0.00 2.87
3266 3388 0.443869 CGCGTCATTGTTCCCAGAAG 59.556 55.000 0.00 0.00 0.00 2.85
3267 3389 0.250124 ACGCGTCATTGTTCCCAGAA 60.250 50.000 5.58 0.00 0.00 3.02
3268 3390 0.948623 CACGCGTCATTGTTCCCAGA 60.949 55.000 9.86 0.00 0.00 3.86
3269 3391 1.497278 CACGCGTCATTGTTCCCAG 59.503 57.895 9.86 0.00 0.00 4.45
3270 3392 1.963855 CCACGCGTCATTGTTCCCA 60.964 57.895 9.86 0.00 0.00 4.37
3271 3393 2.686816 CCCACGCGTCATTGTTCCC 61.687 63.158 9.86 0.00 0.00 3.97
3272 3394 2.867472 CCCACGCGTCATTGTTCC 59.133 61.111 9.86 0.00 0.00 3.62
3273 3395 2.175811 GCCCACGCGTCATTGTTC 59.824 61.111 9.86 0.00 0.00 3.18
3274 3396 3.361977 GGCCCACGCGTCATTGTT 61.362 61.111 9.86 0.00 35.02 2.83
3275 3397 4.634703 TGGCCCACGCGTCATTGT 62.635 61.111 9.86 0.00 35.02 2.71
3276 3398 4.101790 GTGGCCCACGCGTCATTG 62.102 66.667 9.86 0.00 35.02 2.82
3277 3399 4.634703 TGTGGCCCACGCGTCATT 62.635 61.111 9.86 0.00 37.14 2.57
3285 3407 2.665185 GTCGTGTCTGTGGCCCAC 60.665 66.667 7.01 7.01 34.56 4.61
3286 3408 3.936203 GGTCGTGTCTGTGGCCCA 61.936 66.667 0.00 0.00 0.00 5.36
3288 3410 3.916392 CTCGGTCGTGTCTGTGGCC 62.916 68.421 0.00 0.00 0.00 5.36
3289 3411 2.430921 CTCGGTCGTGTCTGTGGC 60.431 66.667 0.00 0.00 0.00 5.01
3290 3412 2.258591 CCTCGGTCGTGTCTGTGG 59.741 66.667 0.00 0.00 0.00 4.17
3291 3413 2.430921 GCCTCGGTCGTGTCTGTG 60.431 66.667 0.00 0.00 0.00 3.66
3292 3414 3.681835 GGCCTCGGTCGTGTCTGT 61.682 66.667 0.00 0.00 0.00 3.41
3293 3415 3.680786 TGGCCTCGGTCGTGTCTG 61.681 66.667 3.32 0.00 0.00 3.51
3294 3416 3.681835 GTGGCCTCGGTCGTGTCT 61.682 66.667 3.32 0.00 0.00 3.41
3295 3417 4.736896 GGTGGCCTCGGTCGTGTC 62.737 72.222 3.32 0.00 0.00 3.67
3297 3419 3.934391 GAAGGTGGCCTCGGTCGTG 62.934 68.421 3.32 0.00 30.89 4.35
3298 3420 3.692406 GAAGGTGGCCTCGGTCGT 61.692 66.667 3.32 0.00 30.89 4.34
3299 3421 4.452733 GGAAGGTGGCCTCGGTCG 62.453 72.222 3.32 0.00 30.89 4.79
3300 3422 3.003763 AGGAAGGTGGCCTCGGTC 61.004 66.667 3.32 0.70 30.89 4.79
3301 3423 3.322466 CAGGAAGGTGGCCTCGGT 61.322 66.667 3.32 0.00 32.12 4.69
3302 3424 4.785453 GCAGGAAGGTGGCCTCGG 62.785 72.222 3.32 0.00 32.12 4.63
3316 3438 1.356624 GCGATGAAAATCCCCGCAG 59.643 57.895 0.00 0.00 44.55 5.18
3317 3439 2.118404 GGCGATGAAAATCCCCGCA 61.118 57.895 0.00 0.00 46.64 5.69
3318 3440 2.721859 GGCGATGAAAATCCCCGC 59.278 61.111 0.00 0.00 44.45 6.13
3319 3441 2.542907 CGGGCGATGAAAATCCCCG 61.543 63.158 15.51 15.51 43.11 5.73
3320 3442 0.179040 TACGGGCGATGAAAATCCCC 60.179 55.000 0.00 0.00 35.32 4.81
3321 3443 1.535462 CATACGGGCGATGAAAATCCC 59.465 52.381 0.00 0.00 35.42 3.85
3322 3444 2.480419 CTCATACGGGCGATGAAAATCC 59.520 50.000 0.00 0.00 33.01 3.01
3323 3445 2.096218 GCTCATACGGGCGATGAAAATC 60.096 50.000 0.00 0.00 33.01 2.17
3324 3446 1.873591 GCTCATACGGGCGATGAAAAT 59.126 47.619 0.00 0.00 33.01 1.82
3325 3447 1.295792 GCTCATACGGGCGATGAAAA 58.704 50.000 0.00 0.00 33.01 2.29
3326 3448 0.176910 TGCTCATACGGGCGATGAAA 59.823 50.000 0.00 0.00 33.01 2.69
3327 3449 0.392706 ATGCTCATACGGGCGATGAA 59.607 50.000 0.00 0.00 33.01 2.57
3328 3450 0.392706 AATGCTCATACGGGCGATGA 59.607 50.000 0.00 0.00 0.00 2.92
3329 3451 0.514255 CAATGCTCATACGGGCGATG 59.486 55.000 0.00 0.00 0.00 3.84
3330 3452 0.106708 ACAATGCTCATACGGGCGAT 59.893 50.000 0.00 0.00 0.00 4.58
3331 3453 1.520192 ACAATGCTCATACGGGCGA 59.480 52.632 0.00 0.00 0.00 5.54
3332 3454 4.124910 ACAATGCTCATACGGGCG 57.875 55.556 0.00 0.00 0.00 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.