Multiple sequence alignment - TraesCS1A01G145300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G145300 chr1A 100.000 3389 0 0 1 3389 251375343 251378731 0.000000e+00 6259.0
1 TraesCS1A01G145300 chr1A 93.213 221 10 3 416 631 540643065 540643285 1.520000e-83 320.0
2 TraesCS1A01G145300 chr1A 88.525 244 22 4 3148 3389 41351249 41351488 1.190000e-74 291.0
3 TraesCS1A01G145300 chr1A 91.534 189 10 4 2408 2593 251931230 251931415 4.340000e-64 255.0
4 TraesCS1A01G145300 chr1A 100.000 102 0 0 313 414 251375554 251375655 4.460000e-44 189.0
5 TraesCS1A01G145300 chr1A 91.071 56 3 2 2540 2594 324452826 324452880 1.300000e-09 75.0
6 TraesCS1A01G145300 chr1B 95.467 1081 26 16 1527 2591 280182487 280183560 0.000000e+00 1703.0
7 TraesCS1A01G145300 chr1B 95.000 860 34 4 631 1489 280181558 280182409 0.000000e+00 1341.0
8 TraesCS1A01G145300 chr1B 93.361 241 16 0 1 241 20755043 20754803 1.160000e-94 357.0
9 TraesCS1A01G145300 chr1B 86.392 316 35 6 315 629 20778141 20777833 4.190000e-89 339.0
10 TraesCS1A01G145300 chr1B 84.232 241 30 7 396 629 20754768 20754529 9.460000e-56 228.0
11 TraesCS1A01G145300 chr1B 87.310 197 23 2 2938 3134 280183675 280183869 1.220000e-54 224.0
12 TraesCS1A01G145300 chr1D 95.514 1070 24 11 1512 2567 199624456 199625515 0.000000e+00 1688.0
13 TraesCS1A01G145300 chr1D 94.111 866 25 8 631 1489 199623544 199624390 0.000000e+00 1293.0
14 TraesCS1A01G145300 chr6B 98.569 629 9 0 1 629 22940061 22940689 0.000000e+00 1112.0
15 TraesCS1A01G145300 chr2A 93.810 630 17 9 1 629 765414844 765415452 0.000000e+00 928.0
16 TraesCS1A01G145300 chr2A 88.363 507 55 2 1888 2394 17955876 17956378 1.040000e-169 606.0
17 TraesCS1A01G145300 chr2A 82.689 647 61 26 1 629 43820658 43820045 8.330000e-146 527.0
18 TraesCS1A01G145300 chr2A 86.052 466 33 11 1030 1495 17954312 17954745 3.960000e-129 472.0
19 TraesCS1A01G145300 chr2A 90.253 277 21 1 1 271 43844895 43844619 1.160000e-94 357.0
20 TraesCS1A01G145300 chr2A 82.282 412 56 10 1921 2321 17988327 17988732 1.160000e-89 340.0
21 TraesCS1A01G145300 chr2A 87.671 292 27 4 1 284 43902872 43902582 7.010000e-87 331.0
22 TraesCS1A01G145300 chr2A 91.880 234 19 0 1561 1794 17954845 17955078 9.070000e-86 327.0
23 TraesCS1A01G145300 chr2A 75.569 483 89 19 1342 1800 607476472 607476949 9.530000e-51 211.0
24 TraesCS1A01G145300 chr2D 82.947 950 99 45 892 1800 16056926 16057853 0.000000e+00 798.0
25 TraesCS1A01G145300 chr2D 88.583 508 54 2 1888 2395 16058115 16058618 6.220000e-172 614.0
26 TraesCS1A01G145300 chr2D 88.473 347 12 9 1 319 623393634 623393288 8.810000e-106 394.0
27 TraesCS1A01G145300 chr2D 86.025 322 24 12 315 632 623393394 623393090 3.260000e-85 326.0
28 TraesCS1A01G145300 chr2D 75.158 475 97 18 1342 1800 462197730 462198199 1.590000e-48 204.0
29 TraesCS1A01G145300 chr2D 78.824 255 48 6 1549 1800 6463298 6463549 2.090000e-37 167.0
30 TraesCS1A01G145300 chr7A 99.758 414 1 0 1 414 1868304 1867891 0.000000e+00 760.0
31 TraesCS1A01G145300 chr7A 91.169 419 10 3 212 629 1867790 1867398 8.270000e-151 544.0
32 TraesCS1A01G145300 chr7A 99.015 203 2 0 212 414 1867992 1867790 6.910000e-97 364.0
33 TraesCS1A01G145300 chr7A 98.522 203 3 0 212 414 1867891 1867689 3.220000e-95 359.0
34 TraesCS1A01G145300 chr7A 100.000 102 0 0 313 414 1868093 1867992 4.460000e-44 189.0
35 TraesCS1A01G145300 chr7A 84.252 127 19 1 2593 2718 701769637 701769511 4.590000e-24 122.0
36 TraesCS1A01G145300 chr2B 86.055 545 67 6 1854 2394 28324833 28325372 8.150000e-161 577.0
37 TraesCS1A01G145300 chr2B 85.714 378 32 11 892 1247 28323737 28324114 2.470000e-101 379.0
38 TraesCS1A01G145300 chr2B 89.960 249 25 0 1552 1800 28324395 28324643 4.220000e-84 322.0
39 TraesCS1A01G145300 chr2B 75.720 486 79 30 1342 1800 544982009 544982482 1.230000e-49 207.0
40 TraesCS1A01G145300 chr2B 97.222 36 1 0 3183 3218 721728121 721728156 1.020000e-05 62.1
41 TraesCS1A01G145300 chr6D 91.875 320 15 2 1 319 79952022 79952331 1.440000e-118 436.0
42 TraesCS1A01G145300 chr6D 86.834 319 22 8 313 629 79952233 79952533 4.190000e-89 339.0
43 TraesCS1A01G145300 chr6D 83.908 174 23 4 1073 1243 457473216 457473045 9.730000e-36 161.0
44 TraesCS1A01G145300 chr6D 74.408 211 44 10 3182 3389 156733876 156734079 7.790000e-12 82.4
45 TraesCS1A01G145300 chr5D 94.444 252 13 1 3139 3389 540182508 540182257 1.470000e-103 387.0
46 TraesCS1A01G145300 chr5D 90.446 157 15 0 1086 1242 353762844 353763000 1.230000e-49 207.0
47 TraesCS1A01G145300 chr5D 82.707 133 22 1 2590 2721 91631854 91631722 2.140000e-22 117.0
48 TraesCS1A01G145300 chr5D 82.308 130 21 2 1348 1476 353763002 353763130 9.940000e-21 111.0
49 TraesCS1A01G145300 chr3A 91.235 251 20 2 3139 3389 574320751 574320999 1.160000e-89 340.0
50 TraesCS1A01G145300 chr3A 83.721 129 18 3 2593 2719 512308653 512308780 5.940000e-23 119.0
51 TraesCS1A01G145300 chr3A 83.465 127 20 1 2593 2718 186364107 186364233 2.140000e-22 117.0
52 TraesCS1A01G145300 chr7D 90.514 253 19 4 3139 3389 492815982 492816231 2.520000e-86 329.0
53 TraesCS1A01G145300 chr7D 91.071 56 3 2 2540 2594 595916851 595916905 1.300000e-09 75.0
54 TraesCS1A01G145300 chr7D 83.562 73 10 2 561 632 42920769 42920698 2.180000e-07 67.6
55 TraesCS1A01G145300 chr7B 87.747 253 29 2 3139 3389 562011142 562010890 9.200000e-76 294.0
56 TraesCS1A01G145300 chr7B 87.352 253 30 2 3139 3389 32358002 32357750 4.280000e-74 289.0
57 TraesCS1A01G145300 chr5A 86.770 257 28 5 3138 3389 203309381 203309126 7.160000e-72 281.0
58 TraesCS1A01G145300 chr5A 89.441 161 17 0 1082 1242 454720211 454720371 1.590000e-48 204.0
59 TraesCS1A01G145300 chr5A 75.378 463 87 23 1348 1794 454720373 454720824 7.420000e-47 198.0
60 TraesCS1A01G145300 chr5A 87.692 130 13 2 2590 2718 398934707 398934834 7.580000e-32 148.0
61 TraesCS1A01G145300 chr5A 84.615 130 19 1 2590 2718 478891995 478892124 9.870000e-26 128.0
62 TraesCS1A01G145300 chr5A 84.416 77 8 4 557 631 553530317 553530391 4.690000e-09 73.1
63 TraesCS1A01G145300 chr6A 75.847 472 98 14 1334 1800 430343110 430342650 3.400000e-55 226.0
64 TraesCS1A01G145300 chr6A 84.564 149 20 3 1073 1219 604384718 604384865 9.800000e-31 145.0
65 TraesCS1A01G145300 chr6A 83.465 127 20 1 2593 2718 94235214 94235340 2.140000e-22 117.0
66 TraesCS1A01G145300 chr5B 85.827 127 17 1 2593 2718 562073523 562073649 2.120000e-27 134.0
67 TraesCS1A01G145300 chr5B 81.538 130 22 2 1348 1476 417874738 417874866 4.620000e-19 106.0
68 TraesCS1A01G145300 chr4A 83.077 130 21 1 2591 2719 581404635 581404764 2.140000e-22 117.0
69 TraesCS1A01G145300 chr4D 91.071 56 3 2 2540 2594 448798659 448798605 1.300000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G145300 chr1A 251375343 251378731 3388 False 3224.000000 6259 100.000000 1 3389 2 chr1A.!!$F5 3388
1 TraesCS1A01G145300 chr1B 280181558 280183869 2311 False 1089.333333 1703 92.592333 631 3134 3 chr1B.!!$F1 2503
2 TraesCS1A01G145300 chr1B 20754529 20755043 514 True 292.500000 357 88.796500 1 629 2 chr1B.!!$R2 628
3 TraesCS1A01G145300 chr1D 199623544 199625515 1971 False 1490.500000 1688 94.812500 631 2567 2 chr1D.!!$F1 1936
4 TraesCS1A01G145300 chr6B 22940061 22940689 628 False 1112.000000 1112 98.569000 1 629 1 chr6B.!!$F1 628
5 TraesCS1A01G145300 chr2A 765414844 765415452 608 False 928.000000 928 93.810000 1 629 1 chr2A.!!$F3 628
6 TraesCS1A01G145300 chr2A 43820045 43820658 613 True 527.000000 527 82.689000 1 629 1 chr2A.!!$R1 628
7 TraesCS1A01G145300 chr2A 17954312 17956378 2066 False 468.333333 606 88.765000 1030 2394 3 chr2A.!!$F4 1364
8 TraesCS1A01G145300 chr2D 16056926 16058618 1692 False 706.000000 798 85.765000 892 2395 2 chr2D.!!$F3 1503
9 TraesCS1A01G145300 chr2D 623393090 623393634 544 True 360.000000 394 87.249000 1 632 2 chr2D.!!$R1 631
10 TraesCS1A01G145300 chr7A 1867398 1868304 906 True 443.200000 760 97.692800 1 629 5 chr7A.!!$R2 628
11 TraesCS1A01G145300 chr2B 28323737 28325372 1635 False 426.000000 577 87.243000 892 2394 3 chr2B.!!$F3 1502
12 TraesCS1A01G145300 chr6D 79952022 79952533 511 False 387.500000 436 89.354500 1 629 2 chr6D.!!$F2 628
13 TraesCS1A01G145300 chr5A 454720211 454720824 613 False 201.000000 204 82.409500 1082 1794 2 chr5A.!!$F4 712

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
691 1031 0.391130 CGAGCACCCAAATTCCGAGA 60.391 55.0 0.00 0.00 0.00 4.04 F
967 1314 0.525668 ACGTGACGATCGATCAAGCC 60.526 55.0 24.34 10.54 0.00 4.35 F
1847 3076 0.108585 CAACACCACTAGCCACAGGT 59.891 55.0 0.00 0.00 33.91 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1845 3074 0.458716 GGTGCTCGTCTCTGCTTACC 60.459 60.0 0.00 0.0 0.0 2.85 R
2235 3481 0.677842 ACACGTACTGGTCCCTGTTC 59.322 55.0 0.95 0.0 0.0 3.18 R
3266 4529 0.095935 CAGCACCGATCAAAGCGAAG 59.904 55.0 0.00 0.0 0.0 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
208 209 2.155194 CGGAAGCAGCTTCGTCGAG 61.155 63.158 25.64 12.36 40.99 4.04
544 883 4.764679 TGTCGCACTTAATTTTGATGCT 57.235 36.364 0.00 0.00 34.06 3.79
690 1030 1.982073 GCGAGCACCCAAATTCCGAG 61.982 60.000 0.00 0.00 0.00 4.63
691 1031 0.391130 CGAGCACCCAAATTCCGAGA 60.391 55.000 0.00 0.00 0.00 4.04
776 1116 1.064758 TGTGGAAGTTGAAGTGCCAGT 60.065 47.619 0.00 0.00 0.00 4.00
967 1314 0.525668 ACGTGACGATCGATCAAGCC 60.526 55.000 24.34 10.54 0.00 4.35
987 1338 4.662961 CGGTGCACTGCCTCGACA 62.663 66.667 17.98 0.00 0.00 4.35
1506 1880 1.201429 AACTCATCCCCAGCTCGGTT 61.201 55.000 0.00 0.00 0.00 4.44
1507 1881 1.153289 CTCATCCCCAGCTCGGTTG 60.153 63.158 0.00 0.00 0.00 3.77
1508 1882 1.612146 TCATCCCCAGCTCGGTTGA 60.612 57.895 0.00 1.54 0.00 3.18
1509 1883 0.982852 TCATCCCCAGCTCGGTTGAT 60.983 55.000 0.00 0.00 0.00 2.57
1520 1973 5.692204 CCAGCTCGGTTGATAATACTAGTTG 59.308 44.000 0.00 0.00 0.00 3.16
1521 1974 5.692204 CAGCTCGGTTGATAATACTAGTTGG 59.308 44.000 0.00 0.00 0.00 3.77
1522 1975 5.363005 AGCTCGGTTGATAATACTAGTTGGT 59.637 40.000 0.00 0.00 0.00 3.67
1795 2290 3.695060 TCCGAGTACAAGAAGATCCTCAC 59.305 47.826 0.00 0.00 0.00 3.51
1839 3068 0.673644 CCTTCCGGCAACACCACTAG 60.674 60.000 0.00 0.00 39.03 2.57
1843 3072 3.668386 GGCAACACCACTAGCCAC 58.332 61.111 0.00 0.00 46.26 5.01
1844 3073 1.228124 GGCAACACCACTAGCCACA 60.228 57.895 0.00 0.00 46.26 4.17
1845 3074 1.237285 GGCAACACCACTAGCCACAG 61.237 60.000 0.00 0.00 46.26 3.66
1846 3075 1.237285 GCAACACCACTAGCCACAGG 61.237 60.000 0.00 0.00 0.00 4.00
1847 3076 0.108585 CAACACCACTAGCCACAGGT 59.891 55.000 0.00 0.00 33.91 4.00
1848 3077 1.346395 CAACACCACTAGCCACAGGTA 59.654 52.381 0.00 0.00 32.01 3.08
1849 3078 1.724545 ACACCACTAGCCACAGGTAA 58.275 50.000 0.00 0.00 32.01 2.85
1850 3079 1.623811 ACACCACTAGCCACAGGTAAG 59.376 52.381 0.00 0.00 32.01 2.34
1851 3080 0.613777 ACCACTAGCCACAGGTAAGC 59.386 55.000 0.00 0.00 31.32 3.09
1852 3081 0.613260 CCACTAGCCACAGGTAAGCA 59.387 55.000 0.00 0.00 0.00 3.91
2514 3768 4.460263 AGTTGTGTGTTGCTAATTGGAGA 58.540 39.130 0.00 0.00 0.00 3.71
2522 3776 8.243426 GTGTGTTGCTAATTGGAGATCAATAAA 58.757 33.333 0.00 0.00 44.68 1.40
2524 3778 9.455847 GTGTTGCTAATTGGAGATCAATAAATC 57.544 33.333 0.00 0.00 44.68 2.17
2532 3786 8.964476 ATTGGAGATCAATAAATCGTGTAACT 57.036 30.769 0.00 0.00 43.71 2.24
2544 3798 4.488126 TCGTGTAACTAGTAAGCGTGTT 57.512 40.909 0.00 0.00 31.75 3.32
2545 3799 5.605564 TCGTGTAACTAGTAAGCGTGTTA 57.394 39.130 0.00 0.00 31.75 2.41
2546 3800 5.382303 TCGTGTAACTAGTAAGCGTGTTAC 58.618 41.667 0.00 0.00 42.69 2.50
2591 3845 6.313658 TCGAAAACATAATGACCAGTGAGATG 59.686 38.462 0.00 0.00 0.00 2.90
2592 3846 6.092670 CGAAAACATAATGACCAGTGAGATGT 59.907 38.462 0.00 0.00 0.00 3.06
2594 3848 7.849804 AAACATAATGACCAGTGAGATGTAC 57.150 36.000 0.00 0.00 0.00 2.90
2595 3849 6.798427 ACATAATGACCAGTGAGATGTACT 57.202 37.500 0.00 0.00 0.00 2.73
2596 3850 6.810911 ACATAATGACCAGTGAGATGTACTC 58.189 40.000 0.00 0.00 45.11 2.59
2597 3851 4.744795 AATGACCAGTGAGATGTACTCC 57.255 45.455 0.00 0.00 44.34 3.85
2598 3852 3.458044 TGACCAGTGAGATGTACTCCT 57.542 47.619 0.00 0.00 44.34 3.69
2599 3853 3.779444 TGACCAGTGAGATGTACTCCTT 58.221 45.455 0.00 0.00 44.34 3.36
2604 3867 4.202202 CCAGTGAGATGTACTCCTTCCATC 60.202 50.000 0.00 0.00 44.34 3.51
2606 3869 3.706594 GTGAGATGTACTCCTTCCATCCA 59.293 47.826 0.00 0.00 44.34 3.41
2607 3870 3.963374 TGAGATGTACTCCTTCCATCCAG 59.037 47.826 0.00 0.00 44.34 3.86
2610 3873 5.032846 AGATGTACTCCTTCCATCCAGAAA 58.967 41.667 0.00 0.00 36.48 2.52
2613 3876 6.235231 TGTACTCCTTCCATCCAGAAATAC 57.765 41.667 0.00 0.00 0.00 1.89
2621 3884 6.261826 CCTTCCATCCAGAAATACTTGTCATC 59.738 42.308 0.00 0.00 0.00 2.92
2709 3972 8.546597 TCTTGATGACAAATATTTTCAGACGA 57.453 30.769 14.26 10.94 35.49 4.20
2711 3974 9.778993 CTTGATGACAAATATTTTCAGACGAAT 57.221 29.630 14.26 2.63 35.49 3.34
2715 3978 7.751732 TGACAAATATTTTCAGACGAATGGAG 58.248 34.615 0.00 0.00 0.00 3.86
2716 3979 7.390440 TGACAAATATTTTCAGACGAATGGAGT 59.610 33.333 0.00 0.00 0.00 3.85
2717 3980 8.786826 ACAAATATTTTCAGACGAATGGAGTA 57.213 30.769 0.00 0.00 0.00 2.59
2718 3981 9.396022 ACAAATATTTTCAGACGAATGGAGTAT 57.604 29.630 0.00 0.00 0.00 2.12
2719 3982 9.869844 CAAATATTTTCAGACGAATGGAGTATC 57.130 33.333 0.00 0.00 0.00 2.24
2720 3983 9.838339 AAATATTTTCAGACGAATGGAGTATCT 57.162 29.630 0.00 0.00 33.73 1.98
2721 3984 8.824159 ATATTTTCAGACGAATGGAGTATCTG 57.176 34.615 0.00 0.00 38.51 2.90
2722 3985 3.717400 TCAGACGAATGGAGTATCTGC 57.283 47.619 0.00 0.00 37.34 4.26
2723 3986 2.362397 TCAGACGAATGGAGTATCTGCC 59.638 50.000 0.00 0.00 37.34 4.85
2724 3987 2.101415 CAGACGAATGGAGTATCTGCCA 59.899 50.000 0.00 0.00 38.78 4.92
2725 3988 2.766263 AGACGAATGGAGTATCTGCCAA 59.234 45.455 0.00 0.00 37.78 4.52
2726 3989 3.389329 AGACGAATGGAGTATCTGCCAAT 59.611 43.478 0.00 0.00 37.78 3.16
2727 3990 3.470709 ACGAATGGAGTATCTGCCAATG 58.529 45.455 0.00 0.00 37.78 2.82
2728 3991 3.134623 ACGAATGGAGTATCTGCCAATGA 59.865 43.478 0.00 0.00 37.78 2.57
2729 3992 4.129380 CGAATGGAGTATCTGCCAATGAA 58.871 43.478 0.00 0.00 37.78 2.57
2730 3993 4.576053 CGAATGGAGTATCTGCCAATGAAA 59.424 41.667 0.00 0.00 37.78 2.69
2731 3994 5.066375 CGAATGGAGTATCTGCCAATGAAAA 59.934 40.000 0.00 0.00 37.78 2.29
2732 3995 5.841957 ATGGAGTATCTGCCAATGAAAAC 57.158 39.130 0.00 0.00 37.78 2.43
2733 3996 4.661222 TGGAGTATCTGCCAATGAAAACA 58.339 39.130 0.00 0.00 33.73 2.83
2734 3997 4.701651 TGGAGTATCTGCCAATGAAAACAG 59.298 41.667 0.00 0.00 33.73 3.16
2735 3998 4.096984 GGAGTATCTGCCAATGAAAACAGG 59.903 45.833 0.00 0.00 33.73 4.00
2736 3999 4.019174 AGTATCTGCCAATGAAAACAGGG 58.981 43.478 0.00 0.00 0.00 4.45
2737 4000 2.673775 TCTGCCAATGAAAACAGGGA 57.326 45.000 0.00 0.00 0.00 4.20
2738 4001 2.517959 TCTGCCAATGAAAACAGGGAG 58.482 47.619 0.00 0.00 40.51 4.30
2739 4002 2.158475 TCTGCCAATGAAAACAGGGAGT 60.158 45.455 0.00 0.00 40.13 3.85
2740 4003 3.073798 TCTGCCAATGAAAACAGGGAGTA 59.926 43.478 0.00 0.00 40.13 2.59
2741 4004 3.826157 CTGCCAATGAAAACAGGGAGTAA 59.174 43.478 0.00 0.00 35.19 2.24
2742 4005 4.415596 TGCCAATGAAAACAGGGAGTAAT 58.584 39.130 0.00 0.00 0.00 1.89
2743 4006 5.575157 TGCCAATGAAAACAGGGAGTAATA 58.425 37.500 0.00 0.00 0.00 0.98
2744 4007 6.013379 TGCCAATGAAAACAGGGAGTAATAA 58.987 36.000 0.00 0.00 0.00 1.40
2745 4008 6.667414 TGCCAATGAAAACAGGGAGTAATAAT 59.333 34.615 0.00 0.00 0.00 1.28
2746 4009 6.980397 GCCAATGAAAACAGGGAGTAATAATG 59.020 38.462 0.00 0.00 0.00 1.90
2747 4010 7.491682 CCAATGAAAACAGGGAGTAATAATGG 58.508 38.462 0.00 0.00 0.00 3.16
2748 4011 7.124147 CCAATGAAAACAGGGAGTAATAATGGT 59.876 37.037 0.00 0.00 0.00 3.55
2749 4012 9.184523 CAATGAAAACAGGGAGTAATAATGGTA 57.815 33.333 0.00 0.00 0.00 3.25
2750 4013 9.762381 AATGAAAACAGGGAGTAATAATGGTAA 57.238 29.630 0.00 0.00 0.00 2.85
2751 4014 8.570068 TGAAAACAGGGAGTAATAATGGTAAC 57.430 34.615 0.00 0.00 0.00 2.50
2752 4015 7.612633 TGAAAACAGGGAGTAATAATGGTAACC 59.387 37.037 0.00 0.00 0.00 2.85
2753 4016 6.645884 AACAGGGAGTAATAATGGTAACCA 57.354 37.500 0.00 0.00 38.19 3.67
2754 4017 6.248569 ACAGGGAGTAATAATGGTAACCAG 57.751 41.667 0.00 0.00 36.75 4.00
2755 4018 5.729718 ACAGGGAGTAATAATGGTAACCAGT 59.270 40.000 0.00 0.00 36.75 4.00
2756 4019 6.904654 ACAGGGAGTAATAATGGTAACCAGTA 59.095 38.462 0.00 0.00 38.45 2.74
2757 4020 7.403813 ACAGGGAGTAATAATGGTAACCAGTAA 59.596 37.037 0.00 0.00 37.62 2.24
2758 4021 7.931948 CAGGGAGTAATAATGGTAACCAGTAAG 59.068 40.741 0.00 0.00 37.62 2.34
2759 4022 7.072076 AGGGAGTAATAATGGTAACCAGTAAGG 59.928 40.741 0.00 0.00 37.62 2.69
2760 4023 7.071572 GGGAGTAATAATGGTAACCAGTAAGGA 59.928 40.741 0.00 0.00 37.62 3.36
2761 4024 8.657712 GGAGTAATAATGGTAACCAGTAAGGAT 58.342 37.037 0.00 0.00 37.62 3.24
2762 4025 9.708092 GAGTAATAATGGTAACCAGTAAGGATC 57.292 37.037 0.00 0.00 37.62 3.36
2763 4026 9.220906 AGTAATAATGGTAACCAGTAAGGATCA 57.779 33.333 0.00 0.00 37.62 2.92
2764 4027 9.490379 GTAATAATGGTAACCAGTAAGGATCAG 57.510 37.037 0.00 0.00 37.62 2.90
2765 4028 5.373812 AATGGTAACCAGTAAGGATCAGG 57.626 43.478 0.00 0.00 41.22 3.86
2766 4029 3.112263 TGGTAACCAGTAAGGATCAGGG 58.888 50.000 0.00 0.00 41.22 4.45
2767 4030 3.246203 TGGTAACCAGTAAGGATCAGGGA 60.246 47.826 0.00 0.00 41.22 4.20
2768 4031 3.388350 GGTAACCAGTAAGGATCAGGGAG 59.612 52.174 0.00 0.00 41.22 4.30
2769 4032 3.491766 AACCAGTAAGGATCAGGGAGA 57.508 47.619 0.00 0.00 41.22 3.71
2770 4033 3.715648 ACCAGTAAGGATCAGGGAGAT 57.284 47.619 0.00 0.00 41.22 2.75
2771 4034 4.834406 ACCAGTAAGGATCAGGGAGATA 57.166 45.455 0.00 0.00 41.22 1.98
2772 4035 5.361630 ACCAGTAAGGATCAGGGAGATAT 57.638 43.478 0.00 0.00 41.22 1.63
2773 4036 5.090139 ACCAGTAAGGATCAGGGAGATATG 58.910 45.833 0.00 0.00 41.22 1.78
2774 4037 4.469227 CCAGTAAGGATCAGGGAGATATGG 59.531 50.000 0.00 0.00 41.22 2.74
2775 4038 5.090139 CAGTAAGGATCAGGGAGATATGGT 58.910 45.833 0.00 0.00 37.00 3.55
2776 4039 5.046735 CAGTAAGGATCAGGGAGATATGGTG 60.047 48.000 0.00 0.00 37.00 4.17
2777 4040 3.931241 AGGATCAGGGAGATATGGTGA 57.069 47.619 0.00 0.00 37.00 4.02
2778 4041 4.219392 AGGATCAGGGAGATATGGTGAA 57.781 45.455 0.00 0.00 37.00 3.18
2779 4042 4.570926 AGGATCAGGGAGATATGGTGAAA 58.429 43.478 0.00 0.00 37.00 2.69
2780 4043 5.168679 AGGATCAGGGAGATATGGTGAAAT 58.831 41.667 0.00 0.00 37.00 2.17
2781 4044 5.013913 AGGATCAGGGAGATATGGTGAAATG 59.986 44.000 0.00 0.00 37.00 2.32
2782 4045 4.090761 TCAGGGAGATATGGTGAAATGC 57.909 45.455 0.00 0.00 0.00 3.56
2783 4046 3.459227 TCAGGGAGATATGGTGAAATGCA 59.541 43.478 0.00 0.00 0.00 3.96
2784 4047 4.105217 TCAGGGAGATATGGTGAAATGCAT 59.895 41.667 0.00 0.00 0.00 3.96
2785 4048 4.217767 CAGGGAGATATGGTGAAATGCATG 59.782 45.833 0.00 0.00 0.00 4.06
2786 4049 4.141088 AGGGAGATATGGTGAAATGCATGT 60.141 41.667 0.00 0.00 0.00 3.21
2787 4050 4.217118 GGGAGATATGGTGAAATGCATGTC 59.783 45.833 10.16 10.16 0.00 3.06
2788 4051 5.068636 GGAGATATGGTGAAATGCATGTCT 58.931 41.667 17.76 0.08 0.00 3.41
2789 4052 5.533903 GGAGATATGGTGAAATGCATGTCTT 59.466 40.000 17.76 0.00 0.00 3.01
2790 4053 6.712095 GGAGATATGGTGAAATGCATGTCTTA 59.288 38.462 17.76 4.80 0.00 2.10
2791 4054 7.392673 GGAGATATGGTGAAATGCATGTCTTAT 59.607 37.037 17.76 11.18 0.00 1.73
2792 4055 9.440773 GAGATATGGTGAAATGCATGTCTTATA 57.559 33.333 17.76 12.74 0.00 0.98
2793 4056 9.797642 AGATATGGTGAAATGCATGTCTTATAA 57.202 29.630 17.76 1.86 0.00 0.98
2794 4057 9.831737 GATATGGTGAAATGCATGTCTTATAAC 57.168 33.333 17.76 7.04 0.00 1.89
2795 4058 7.643569 ATGGTGAAATGCATGTCTTATAACA 57.356 32.000 17.76 6.77 0.00 2.41
2796 4059 7.459795 TGGTGAAATGCATGTCTTATAACAA 57.540 32.000 17.76 0.00 31.81 2.83
2797 4060 8.065473 TGGTGAAATGCATGTCTTATAACAAT 57.935 30.769 17.76 0.00 31.81 2.71
2798 4061 9.183368 TGGTGAAATGCATGTCTTATAACAATA 57.817 29.630 17.76 0.00 31.81 1.90
2799 4062 9.450807 GGTGAAATGCATGTCTTATAACAATAC 57.549 33.333 17.76 3.61 31.81 1.89
2805 4068 9.955208 ATGCATGTCTTATAACAATACAACATG 57.045 29.630 0.00 7.58 43.37 3.21
2806 4069 8.404765 TGCATGTCTTATAACAATACAACATGG 58.595 33.333 12.46 0.00 41.73 3.66
2807 4070 8.405531 GCATGTCTTATAACAATACAACATGGT 58.594 33.333 12.46 0.00 41.73 3.55
2819 4082 9.585099 ACAATACAACATGGTAATAGCAAATTG 57.415 29.630 13.84 13.84 33.46 2.32
2820 4083 9.585099 CAATACAACATGGTAATAGCAAATTGT 57.415 29.630 20.57 20.57 39.45 2.71
2824 4087 9.418045 ACAACATGGTAATAGCAAATTGTAAAC 57.582 29.630 17.42 0.00 36.57 2.01
2825 4088 9.638239 CAACATGGTAATAGCAAATTGTAAACT 57.362 29.630 0.00 0.00 0.00 2.66
2855 4118 8.974060 ACACTAAGAAAGAAGGTACAATTCAA 57.026 30.769 11.36 0.00 0.00 2.69
2856 4119 9.057089 ACACTAAGAAAGAAGGTACAATTCAAG 57.943 33.333 11.36 5.22 0.00 3.02
2857 4120 9.057089 CACTAAGAAAGAAGGTACAATTCAAGT 57.943 33.333 11.36 5.67 0.00 3.16
2858 4121 9.628500 ACTAAGAAAGAAGGTACAATTCAAGTT 57.372 29.630 11.36 4.09 0.00 2.66
2859 4122 9.884465 CTAAGAAAGAAGGTACAATTCAAGTTG 57.116 33.333 11.36 0.00 35.25 3.16
2860 4123 7.881775 AGAAAGAAGGTACAATTCAAGTTGT 57.118 32.000 2.11 0.00 44.09 3.32
2861 4124 7.931275 AGAAAGAAGGTACAATTCAAGTTGTC 58.069 34.615 2.11 0.00 41.18 3.18
2862 4125 5.924475 AGAAGGTACAATTCAAGTTGTCG 57.076 39.130 2.11 0.00 41.18 4.35
2863 4126 4.213482 AGAAGGTACAATTCAAGTTGTCGC 59.787 41.667 2.11 0.00 41.18 5.19
2864 4127 3.472652 AGGTACAATTCAAGTTGTCGCA 58.527 40.909 2.11 0.00 41.18 5.10
2865 4128 4.072131 AGGTACAATTCAAGTTGTCGCAT 58.928 39.130 2.11 0.00 41.18 4.73
2866 4129 4.083324 AGGTACAATTCAAGTTGTCGCATG 60.083 41.667 2.11 0.00 41.18 4.06
2867 4130 2.664916 ACAATTCAAGTTGTCGCATGC 58.335 42.857 7.91 7.91 37.80 4.06
2868 4131 2.034432 ACAATTCAAGTTGTCGCATGCA 59.966 40.909 19.57 1.73 37.80 3.96
2869 4132 3.247442 CAATTCAAGTTGTCGCATGCAT 58.753 40.909 19.57 0.00 0.00 3.96
2870 4133 2.617250 TTCAAGTTGTCGCATGCATC 57.383 45.000 19.57 10.25 0.00 3.91
2871 4134 1.521580 TCAAGTTGTCGCATGCATCA 58.478 45.000 19.57 12.89 0.00 3.07
2872 4135 1.878734 TCAAGTTGTCGCATGCATCAA 59.121 42.857 19.57 17.98 0.00 2.57
2873 4136 2.488937 TCAAGTTGTCGCATGCATCAAT 59.511 40.909 19.57 5.45 0.00 2.57
2874 4137 3.057386 TCAAGTTGTCGCATGCATCAATT 60.057 39.130 19.57 14.90 0.00 2.32
2875 4138 3.141002 AGTTGTCGCATGCATCAATTC 57.859 42.857 19.57 10.57 0.00 2.17
2876 4139 2.488937 AGTTGTCGCATGCATCAATTCA 59.511 40.909 19.57 2.69 0.00 2.57
2877 4140 2.836479 TGTCGCATGCATCAATTCAG 57.164 45.000 19.57 0.00 0.00 3.02
2878 4141 1.202211 TGTCGCATGCATCAATTCAGC 60.202 47.619 19.57 0.00 0.00 4.26
2879 4142 1.096416 TCGCATGCATCAATTCAGCA 58.904 45.000 19.57 0.00 43.14 4.41
2881 4144 2.051423 CGCATGCATCAATTCAGCATC 58.949 47.619 19.57 2.56 46.39 3.91
2882 4145 2.404215 GCATGCATCAATTCAGCATCC 58.596 47.619 14.21 0.00 46.39 3.51
2883 4146 2.661594 CATGCATCAATTCAGCATCCG 58.338 47.619 0.00 0.00 46.39 4.18
2884 4147 2.041251 TGCATCAATTCAGCATCCGA 57.959 45.000 0.00 0.00 32.55 4.55
2885 4148 2.367486 TGCATCAATTCAGCATCCGAA 58.633 42.857 0.00 0.00 32.55 4.30
2886 4149 2.754002 TGCATCAATTCAGCATCCGAAA 59.246 40.909 0.00 0.00 32.55 3.46
2887 4150 3.193056 TGCATCAATTCAGCATCCGAAAA 59.807 39.130 0.00 0.00 32.55 2.29
2888 4151 4.175516 GCATCAATTCAGCATCCGAAAAA 58.824 39.130 0.00 0.00 0.00 1.94
2914 4177 8.618702 ATGAATCATGTACATCAGATTTCTCC 57.381 34.615 17.75 9.25 31.35 3.71
2915 4178 7.799081 TGAATCATGTACATCAGATTTCTCCT 58.201 34.615 17.75 0.98 31.35 3.69
2916 4179 7.713942 TGAATCATGTACATCAGATTTCTCCTG 59.286 37.037 17.75 1.48 31.35 3.86
2917 4180 5.922053 TCATGTACATCAGATTTCTCCTGG 58.078 41.667 5.07 0.00 32.73 4.45
2918 4181 5.662657 TCATGTACATCAGATTTCTCCTGGA 59.337 40.000 5.07 0.00 32.73 3.86
2919 4182 6.328410 TCATGTACATCAGATTTCTCCTGGAT 59.672 38.462 5.07 0.00 32.73 3.41
2920 4183 6.166984 TGTACATCAGATTTCTCCTGGATC 57.833 41.667 0.00 0.00 32.73 3.36
2921 4184 5.662657 TGTACATCAGATTTCTCCTGGATCA 59.337 40.000 0.00 0.00 32.73 2.92
2922 4185 5.705397 ACATCAGATTTCTCCTGGATCAA 57.295 39.130 0.00 0.00 32.73 2.57
2923 4186 6.070951 ACATCAGATTTCTCCTGGATCAAA 57.929 37.500 0.00 0.00 32.73 2.69
2924 4187 6.487828 ACATCAGATTTCTCCTGGATCAAAA 58.512 36.000 0.00 0.00 32.73 2.44
2925 4188 6.376581 ACATCAGATTTCTCCTGGATCAAAAC 59.623 38.462 0.00 0.00 32.73 2.43
2926 4189 5.879763 TCAGATTTCTCCTGGATCAAAACA 58.120 37.500 0.00 0.00 32.73 2.83
2927 4190 5.942236 TCAGATTTCTCCTGGATCAAAACAG 59.058 40.000 0.00 0.00 32.73 3.16
2936 4199 5.051891 CTGGATCAAAACAGGAATCACAC 57.948 43.478 0.00 0.00 0.00 3.82
2944 4207 5.964958 AAACAGGAATCACACATACTTGG 57.035 39.130 0.00 0.00 0.00 3.61
2948 4211 4.093408 CAGGAATCACACATACTTGGAACG 59.907 45.833 0.00 0.00 0.00 3.95
2957 4220 4.570772 CACATACTTGGAACGATTTCGGAT 59.429 41.667 4.84 0.00 44.95 4.18
2958 4221 4.570772 ACATACTTGGAACGATTTCGGATG 59.429 41.667 4.84 0.00 44.95 3.51
2965 4228 4.680171 GAACGATTTCGGATGTTCCTTT 57.320 40.909 4.84 0.00 44.95 3.11
2977 4240 5.592688 CGGATGTTCCTTTGTATAACCCATT 59.407 40.000 0.00 0.00 33.30 3.16
2978 4241 6.768861 CGGATGTTCCTTTGTATAACCCATTA 59.231 38.462 0.00 0.00 33.30 1.90
2980 4243 7.558444 GGATGTTCCTTTGTATAACCCATTACA 59.442 37.037 0.00 0.00 32.53 2.41
2982 4245 7.463431 TGTTCCTTTGTATAACCCATTACACT 58.537 34.615 0.00 0.00 0.00 3.55
2990 4253 9.664777 TTGTATAACCCATTACACTAGGTAGAT 57.335 33.333 0.00 0.00 32.49 1.98
2991 4254 9.085645 TGTATAACCCATTACACTAGGTAGATG 57.914 37.037 0.00 2.01 32.49 2.90
3024 4287 7.039882 ACTCAATGATTGGAATGAGCATTTTC 58.960 34.615 5.20 0.00 42.34 2.29
3050 4313 5.674525 TGTCCATGATTGTTCTAGTCATCC 58.325 41.667 0.00 0.00 33.91 3.51
3062 4325 6.712998 TGTTCTAGTCATCCTAGTAGCATCTC 59.287 42.308 0.00 0.00 43.23 2.75
3094 4357 3.117046 CTCGTATTCCTCCGCTTCTTTC 58.883 50.000 0.00 0.00 0.00 2.62
3104 4367 4.938226 CCTCCGCTTCTTTCAGTTAAATCT 59.062 41.667 0.00 0.00 0.00 2.40
3114 4377 7.624549 TCTTTCAGTTAAATCTGGTGCTCTAT 58.375 34.615 0.00 0.00 36.25 1.98
3118 4381 9.905713 TTCAGTTAAATCTGGTGCTCTATATTT 57.094 29.630 2.12 2.12 36.25 1.40
3119 4382 9.905713 TCAGTTAAATCTGGTGCTCTATATTTT 57.094 29.630 1.86 0.00 36.25 1.82
3127 4390 8.948631 TCTGGTGCTCTATATTTTAACTTCTG 57.051 34.615 0.00 0.00 0.00 3.02
3179 4442 8.856153 TGTACATACAATCAACCATACAAAGT 57.144 30.769 0.00 0.00 32.40 2.66
3180 4443 8.726068 TGTACATACAATCAACCATACAAAGTG 58.274 33.333 0.00 0.00 32.40 3.16
3181 4444 7.994425 ACATACAATCAACCATACAAAGTGA 57.006 32.000 0.00 0.00 0.00 3.41
3182 4445 8.579850 ACATACAATCAACCATACAAAGTGAT 57.420 30.769 0.00 0.00 0.00 3.06
3183 4446 8.677300 ACATACAATCAACCATACAAAGTGATC 58.323 33.333 0.00 0.00 0.00 2.92
3184 4447 8.676401 CATACAATCAACCATACAAAGTGATCA 58.324 33.333 0.00 0.00 0.00 2.92
3185 4448 6.913170 ACAATCAACCATACAAAGTGATCAC 58.087 36.000 18.47 18.47 0.00 3.06
3186 4449 6.071952 ACAATCAACCATACAAAGTGATCACC 60.072 38.462 22.21 4.75 0.00 4.02
3187 4450 4.331968 TCAACCATACAAAGTGATCACCC 58.668 43.478 22.21 0.00 0.00 4.61
3188 4451 4.078537 CAACCATACAAAGTGATCACCCA 58.921 43.478 22.21 3.74 0.00 4.51
3189 4452 4.380843 ACCATACAAAGTGATCACCCAA 57.619 40.909 22.21 4.46 0.00 4.12
3190 4453 4.934356 ACCATACAAAGTGATCACCCAAT 58.066 39.130 22.21 8.68 0.00 3.16
3191 4454 6.073447 ACCATACAAAGTGATCACCCAATA 57.927 37.500 22.21 10.56 0.00 1.90
3192 4455 5.885912 ACCATACAAAGTGATCACCCAATAC 59.114 40.000 22.21 0.00 0.00 1.89
3193 4456 5.299279 CCATACAAAGTGATCACCCAATACC 59.701 44.000 22.21 0.00 0.00 2.73
3194 4457 4.380843 ACAAAGTGATCACCCAATACCA 57.619 40.909 22.21 0.00 0.00 3.25
3195 4458 4.335416 ACAAAGTGATCACCCAATACCAG 58.665 43.478 22.21 5.16 0.00 4.00
3196 4459 4.202567 ACAAAGTGATCACCCAATACCAGT 60.203 41.667 22.21 5.74 0.00 4.00
3197 4460 4.657814 AAGTGATCACCCAATACCAGTT 57.342 40.909 22.21 3.12 0.00 3.16
3198 4461 4.657814 AGTGATCACCCAATACCAGTTT 57.342 40.909 22.21 0.00 0.00 2.66
3199 4462 4.998051 AGTGATCACCCAATACCAGTTTT 58.002 39.130 22.21 0.00 0.00 2.43
3200 4463 6.134535 AGTGATCACCCAATACCAGTTTTA 57.865 37.500 22.21 0.00 0.00 1.52
3201 4464 6.731467 AGTGATCACCCAATACCAGTTTTAT 58.269 36.000 22.21 0.00 0.00 1.40
3202 4465 6.603201 AGTGATCACCCAATACCAGTTTTATG 59.397 38.462 22.21 0.00 0.00 1.90
3203 4466 6.601613 GTGATCACCCAATACCAGTTTTATGA 59.398 38.462 15.31 0.00 0.00 2.15
3204 4467 7.122055 GTGATCACCCAATACCAGTTTTATGAA 59.878 37.037 15.31 0.00 0.00 2.57
3205 4468 7.671819 TGATCACCCAATACCAGTTTTATGAAA 59.328 33.333 0.00 0.00 0.00 2.69
3206 4469 7.222000 TCACCCAATACCAGTTTTATGAAAC 57.778 36.000 4.99 4.99 44.35 2.78
3207 4470 6.778069 TCACCCAATACCAGTTTTATGAAACA 59.222 34.615 14.74 0.00 46.01 2.83
3208 4471 7.453126 TCACCCAATACCAGTTTTATGAAACAT 59.547 33.333 14.74 3.46 46.01 2.71
3209 4472 7.545265 CACCCAATACCAGTTTTATGAAACATG 59.455 37.037 14.74 9.71 46.01 3.21
3210 4473 7.041107 CCCAATACCAGTTTTATGAAACATGG 58.959 38.462 20.20 20.20 46.01 3.66
3211 4474 7.093552 CCCAATACCAGTTTTATGAAACATGGA 60.094 37.037 24.81 11.63 46.01 3.41
3212 4475 8.310382 CCAATACCAGTTTTATGAAACATGGAA 58.690 33.333 24.81 7.62 46.01 3.53
3213 4476 9.703892 CAATACCAGTTTTATGAAACATGGAAA 57.296 29.630 24.81 17.24 46.01 3.13
3214 4477 9.705290 AATACCAGTTTTATGAAACATGGAAAC 57.295 29.630 24.81 11.25 46.01 2.78
3215 4478 7.360113 ACCAGTTTTATGAAACATGGAAACT 57.640 32.000 24.81 15.35 46.01 2.66
3216 4479 8.472007 ACCAGTTTTATGAAACATGGAAACTA 57.528 30.769 24.81 0.00 46.01 2.24
3217 4480 8.919145 ACCAGTTTTATGAAACATGGAAACTAA 58.081 29.630 24.81 0.00 46.01 2.24
3218 4481 9.927668 CCAGTTTTATGAAACATGGAAACTAAT 57.072 29.630 18.47 0.00 46.01 1.73
3231 4494 9.912634 ACATGGAAACTAATTAAATGTTCTGTG 57.087 29.630 0.00 0.00 0.00 3.66
3232 4495 9.912634 CATGGAAACTAATTAAATGTTCTGTGT 57.087 29.630 0.00 0.00 0.00 3.72
3238 4501 8.927675 ACTAATTAAATGTTCTGTGTAACCCA 57.072 30.769 0.00 0.00 34.36 4.51
3239 4502 9.010029 ACTAATTAAATGTTCTGTGTAACCCAG 57.990 33.333 0.00 0.00 34.36 4.45
3240 4503 6.834168 ATTAAATGTTCTGTGTAACCCAGG 57.166 37.500 0.00 0.00 34.36 4.45
3241 4504 4.447138 AAATGTTCTGTGTAACCCAGGA 57.553 40.909 0.00 0.00 34.36 3.86
3242 4505 4.447138 AATGTTCTGTGTAACCCAGGAA 57.553 40.909 0.00 0.00 34.36 3.36
3243 4506 3.202829 TGTTCTGTGTAACCCAGGAAC 57.797 47.619 0.00 0.00 37.43 3.62
3244 4507 2.775384 TGTTCTGTGTAACCCAGGAACT 59.225 45.455 0.00 0.00 37.62 3.01
3245 4508 3.968649 TGTTCTGTGTAACCCAGGAACTA 59.031 43.478 0.00 0.00 37.62 2.24
3246 4509 4.409574 TGTTCTGTGTAACCCAGGAACTAA 59.590 41.667 0.00 0.00 37.62 2.24
3247 4510 5.072600 TGTTCTGTGTAACCCAGGAACTAAT 59.927 40.000 0.00 0.00 37.62 1.73
3248 4511 5.416271 TCTGTGTAACCCAGGAACTAATC 57.584 43.478 0.00 0.00 31.82 1.75
3249 4512 5.091552 TCTGTGTAACCCAGGAACTAATCT 58.908 41.667 0.00 0.00 31.82 2.40
3250 4513 5.546499 TCTGTGTAACCCAGGAACTAATCTT 59.454 40.000 0.00 0.00 31.82 2.40
3251 4514 6.727231 TCTGTGTAACCCAGGAACTAATCTTA 59.273 38.462 0.00 0.00 31.82 2.10
3252 4515 7.402071 TCTGTGTAACCCAGGAACTAATCTTAT 59.598 37.037 0.00 0.00 31.82 1.73
3253 4516 7.562135 TGTGTAACCCAGGAACTAATCTTATC 58.438 38.462 0.00 0.00 31.82 1.75
3254 4517 6.990939 GTGTAACCCAGGAACTAATCTTATCC 59.009 42.308 0.00 0.00 36.02 2.59
3255 4518 4.957684 ACCCAGGAACTAATCTTATCCG 57.042 45.455 0.00 0.00 36.02 4.18
3256 4519 3.071167 ACCCAGGAACTAATCTTATCCGC 59.929 47.826 0.00 0.00 36.02 5.54
3257 4520 3.325135 CCCAGGAACTAATCTTATCCGCT 59.675 47.826 0.00 0.00 36.02 5.52
3258 4521 4.202367 CCCAGGAACTAATCTTATCCGCTT 60.202 45.833 0.00 0.00 36.02 4.68
3259 4522 5.368989 CCAGGAACTAATCTTATCCGCTTT 58.631 41.667 0.00 0.00 36.02 3.51
3260 4523 5.823045 CCAGGAACTAATCTTATCCGCTTTT 59.177 40.000 0.00 0.00 36.02 2.27
3261 4524 6.238484 CCAGGAACTAATCTTATCCGCTTTTG 60.238 42.308 0.00 0.00 36.02 2.44
3262 4525 6.538742 CAGGAACTAATCTTATCCGCTTTTGA 59.461 38.462 0.00 0.00 36.02 2.69
3263 4526 7.065803 CAGGAACTAATCTTATCCGCTTTTGAA 59.934 37.037 0.00 0.00 36.02 2.69
3264 4527 7.775561 AGGAACTAATCTTATCCGCTTTTGAAT 59.224 33.333 0.00 0.00 36.02 2.57
3265 4528 7.857885 GGAACTAATCTTATCCGCTTTTGAATG 59.142 37.037 0.00 0.00 0.00 2.67
3266 4529 6.729187 ACTAATCTTATCCGCTTTTGAATGC 58.271 36.000 0.00 0.00 0.00 3.56
3267 4530 5.841957 AATCTTATCCGCTTTTGAATGCT 57.158 34.783 1.03 0.00 0.00 3.79
3268 4531 5.841957 ATCTTATCCGCTTTTGAATGCTT 57.158 34.783 1.03 0.00 0.00 3.91
3269 4532 5.235305 TCTTATCCGCTTTTGAATGCTTC 57.765 39.130 1.03 0.00 0.00 3.86
3270 4533 2.549633 ATCCGCTTTTGAATGCTTCG 57.450 45.000 1.03 0.00 0.00 3.79
3271 4534 0.109781 TCCGCTTTTGAATGCTTCGC 60.110 50.000 1.03 0.00 0.00 4.70
3272 4535 0.109597 CCGCTTTTGAATGCTTCGCT 60.110 50.000 1.03 0.00 0.00 4.93
3273 4536 1.666888 CCGCTTTTGAATGCTTCGCTT 60.667 47.619 1.03 0.00 0.00 4.68
3274 4537 2.053627 CGCTTTTGAATGCTTCGCTTT 58.946 42.857 1.03 0.00 0.00 3.51
3275 4538 2.160065 CGCTTTTGAATGCTTCGCTTTG 60.160 45.455 1.03 0.00 0.00 2.77
3276 4539 3.052036 GCTTTTGAATGCTTCGCTTTGA 58.948 40.909 0.00 0.00 0.00 2.69
3277 4540 3.676646 GCTTTTGAATGCTTCGCTTTGAT 59.323 39.130 0.00 0.00 0.00 2.57
3278 4541 4.201561 GCTTTTGAATGCTTCGCTTTGATC 60.202 41.667 0.00 0.00 0.00 2.92
3279 4542 2.811902 TGAATGCTTCGCTTTGATCG 57.188 45.000 0.00 0.00 0.00 3.69
3280 4543 1.398041 TGAATGCTTCGCTTTGATCGG 59.602 47.619 0.00 0.00 0.00 4.18
3281 4544 1.398390 GAATGCTTCGCTTTGATCGGT 59.602 47.619 0.00 0.00 0.00 4.69
3282 4545 0.729116 ATGCTTCGCTTTGATCGGTG 59.271 50.000 0.00 0.00 0.00 4.94
3283 4546 1.226128 GCTTCGCTTTGATCGGTGC 60.226 57.895 0.00 0.00 0.00 5.01
3284 4547 1.639298 GCTTCGCTTTGATCGGTGCT 61.639 55.000 0.00 0.00 0.00 4.40
3285 4548 0.095935 CTTCGCTTTGATCGGTGCTG 59.904 55.000 0.00 0.00 0.00 4.41
3286 4549 1.911293 TTCGCTTTGATCGGTGCTGC 61.911 55.000 0.00 0.00 0.00 5.25
3287 4550 2.486966 GCTTTGATCGGTGCTGCC 59.513 61.111 0.00 0.00 0.00 4.85
3288 4551 3.056313 GCTTTGATCGGTGCTGCCC 62.056 63.158 0.00 0.00 0.00 5.36
3289 4552 1.675310 CTTTGATCGGTGCTGCCCA 60.675 57.895 0.00 0.00 0.00 5.36
3290 4553 1.228398 TTTGATCGGTGCTGCCCAA 60.228 52.632 0.00 0.00 0.00 4.12
3291 4554 0.825425 TTTGATCGGTGCTGCCCAAA 60.825 50.000 0.00 0.00 0.00 3.28
3292 4555 1.243342 TTGATCGGTGCTGCCCAAAG 61.243 55.000 0.00 0.00 0.00 2.77
3293 4556 1.675641 GATCGGTGCTGCCCAAAGT 60.676 57.895 0.00 0.00 0.00 2.66
3294 4557 1.648467 GATCGGTGCTGCCCAAAGTC 61.648 60.000 0.00 0.00 0.00 3.01
3295 4558 3.365265 CGGTGCTGCCCAAAGTCC 61.365 66.667 0.00 0.00 0.00 3.85
3296 4559 2.116125 GGTGCTGCCCAAAGTCCT 59.884 61.111 0.00 0.00 0.00 3.85
3297 4560 1.531602 GGTGCTGCCCAAAGTCCTT 60.532 57.895 0.00 0.00 0.00 3.36
3298 4561 1.527433 GGTGCTGCCCAAAGTCCTTC 61.527 60.000 0.00 0.00 0.00 3.46
3299 4562 0.538287 GTGCTGCCCAAAGTCCTTCT 60.538 55.000 0.00 0.00 0.00 2.85
3300 4563 0.185901 TGCTGCCCAAAGTCCTTCTT 59.814 50.000 0.00 0.00 38.10 2.52
3301 4564 0.600057 GCTGCCCAAAGTCCTTCTTG 59.400 55.000 0.00 0.00 36.40 3.02
3302 4565 1.251251 CTGCCCAAAGTCCTTCTTGG 58.749 55.000 0.00 0.00 36.40 3.61
3303 4566 0.850100 TGCCCAAAGTCCTTCTTGGA 59.150 50.000 2.39 0.00 43.86 3.53
3315 4578 4.981812 TCCTTCTTGGAGGTAAAACTTCC 58.018 43.478 1.47 1.47 43.92 3.46
3322 4585 3.621558 GGAGGTAAAACTTCCATCCCTG 58.378 50.000 3.53 0.00 43.22 4.45
3323 4586 3.621558 GAGGTAAAACTTCCATCCCTGG 58.378 50.000 0.00 0.00 44.64 4.45
3332 4595 2.813338 TCCATCCCTGGATATGTGGA 57.187 50.000 0.00 0.20 46.95 4.02
3333 4596 2.624495 TCCATCCCTGGATATGTGGAG 58.376 52.381 0.00 0.00 46.95 3.86
3334 4597 1.004044 CCATCCCTGGATATGTGGAGC 59.996 57.143 0.00 0.00 46.37 4.70
3335 4598 1.983691 CATCCCTGGATATGTGGAGCT 59.016 52.381 0.00 0.00 32.93 4.09
3336 4599 1.427809 TCCCTGGATATGTGGAGCTG 58.572 55.000 0.00 0.00 0.00 4.24
3337 4600 0.250640 CCCTGGATATGTGGAGCTGC 60.251 60.000 0.00 0.00 0.00 5.25
3338 4601 0.763652 CCTGGATATGTGGAGCTGCT 59.236 55.000 6.82 0.00 0.00 4.24
3339 4602 1.542767 CCTGGATATGTGGAGCTGCTG 60.543 57.143 7.01 0.00 0.00 4.41
3340 4603 0.179037 TGGATATGTGGAGCTGCTGC 60.179 55.000 14.73 14.73 40.05 5.25
3351 4614 3.062585 GCTGCTGCTCGAAAGATCT 57.937 52.632 8.53 0.00 40.84 2.75
3352 4615 1.367659 GCTGCTGCTCGAAAGATCTT 58.632 50.000 8.53 0.88 40.84 2.40
3353 4616 2.544685 GCTGCTGCTCGAAAGATCTTA 58.455 47.619 8.75 0.00 40.84 2.10
3354 4617 3.129871 GCTGCTGCTCGAAAGATCTTAT 58.870 45.455 8.75 0.00 40.84 1.73
3355 4618 3.184178 GCTGCTGCTCGAAAGATCTTATC 59.816 47.826 8.75 7.82 40.84 1.75
3356 4619 3.375642 TGCTGCTCGAAAGATCTTATCG 58.624 45.455 22.90 22.90 40.84 2.92
3357 4620 3.181486 TGCTGCTCGAAAGATCTTATCGT 60.181 43.478 25.40 8.10 40.84 3.73
3358 4621 3.799420 GCTGCTCGAAAGATCTTATCGTT 59.201 43.478 25.40 7.80 40.84 3.85
3359 4622 4.268884 GCTGCTCGAAAGATCTTATCGTTT 59.731 41.667 25.40 7.20 40.84 3.60
3360 4623 5.555443 GCTGCTCGAAAGATCTTATCGTTTC 60.555 44.000 25.40 19.17 40.84 2.78
3361 4624 5.651530 TGCTCGAAAGATCTTATCGTTTCT 58.348 37.500 25.40 6.00 40.84 2.52
3362 4625 5.516696 TGCTCGAAAGATCTTATCGTTTCTG 59.483 40.000 25.40 17.28 40.84 3.02
3363 4626 5.744345 GCTCGAAAGATCTTATCGTTTCTGA 59.256 40.000 25.40 13.61 40.84 3.27
3364 4627 6.419413 GCTCGAAAGATCTTATCGTTTCTGAT 59.581 38.462 25.40 4.40 40.84 2.90
3365 4628 7.358023 GCTCGAAAGATCTTATCGTTTCTGATC 60.358 40.741 25.40 10.73 40.84 2.92
3366 4629 6.633234 TCGAAAGATCTTATCGTTTCTGATCG 59.367 38.462 25.40 18.74 38.68 3.69
3367 4630 6.633234 CGAAAGATCTTATCGTTTCTGATCGA 59.367 38.462 21.64 7.64 38.68 3.59
3368 4631 7.356881 CGAAAGATCTTATCGTTTCTGATCGAC 60.357 40.741 21.64 0.00 38.68 4.20
3369 4632 5.764131 AGATCTTATCGTTTCTGATCGACC 58.236 41.667 7.41 0.00 38.68 4.79
3370 4633 4.976224 TCTTATCGTTTCTGATCGACCA 57.024 40.909 7.41 0.00 38.85 4.02
3371 4634 5.319140 TCTTATCGTTTCTGATCGACCAA 57.681 39.130 7.41 5.21 38.85 3.67
3372 4635 5.716094 TCTTATCGTTTCTGATCGACCAAA 58.284 37.500 7.41 3.67 38.85 3.28
3373 4636 6.338146 TCTTATCGTTTCTGATCGACCAAAT 58.662 36.000 7.41 0.00 38.85 2.32
3374 4637 7.485810 TCTTATCGTTTCTGATCGACCAAATA 58.514 34.615 7.41 0.00 38.85 1.40
3375 4638 5.968387 ATCGTTTCTGATCGACCAAATAC 57.032 39.130 7.41 0.00 38.85 1.89
3376 4639 4.178540 TCGTTTCTGATCGACCAAATACC 58.821 43.478 0.00 0.00 0.00 2.73
3377 4640 3.308866 CGTTTCTGATCGACCAAATACCC 59.691 47.826 0.00 0.00 0.00 3.69
3378 4641 3.553828 TTCTGATCGACCAAATACCCC 57.446 47.619 0.00 0.00 0.00 4.95
3379 4642 2.473070 TCTGATCGACCAAATACCCCA 58.527 47.619 0.00 0.00 0.00 4.96
3380 4643 2.841266 TCTGATCGACCAAATACCCCAA 59.159 45.455 0.00 0.00 0.00 4.12
3381 4644 2.943033 CTGATCGACCAAATACCCCAAC 59.057 50.000 0.00 0.00 0.00 3.77
3382 4645 2.306219 TGATCGACCAAATACCCCAACA 59.694 45.455 0.00 0.00 0.00 3.33
3383 4646 2.483014 TCGACCAAATACCCCAACAG 57.517 50.000 0.00 0.00 0.00 3.16
3384 4647 0.808755 CGACCAAATACCCCAACAGC 59.191 55.000 0.00 0.00 0.00 4.40
3385 4648 1.182667 GACCAAATACCCCAACAGCC 58.817 55.000 0.00 0.00 0.00 4.85
3386 4649 0.252057 ACCAAATACCCCAACAGCCC 60.252 55.000 0.00 0.00 0.00 5.19
3387 4650 0.252012 CCAAATACCCCAACAGCCCA 60.252 55.000 0.00 0.00 0.00 5.36
3388 4651 1.622173 CCAAATACCCCAACAGCCCAT 60.622 52.381 0.00 0.00 0.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
544 883 8.336235 ACCATTGAATTCTTGAAGGTAGGATAA 58.664 33.333 7.05 0.00 0.00 1.75
633 973 1.024271 TGTGCTGCAAAAGTCTCCAC 58.976 50.000 2.77 0.00 0.00 4.02
776 1116 3.571571 GCCGCGTATGTGTAATGAGATA 58.428 45.455 4.92 0.00 0.00 1.98
862 1202 0.249280 GAGGAAGAAGAGCTAGCGCC 60.249 60.000 15.37 8.41 36.60 6.53
987 1338 3.489908 CCATCGTCATCGTGAACTGATCT 60.490 47.826 0.00 0.00 38.33 2.75
1367 1741 2.506438 GACAGGTACGGCAGCGTC 60.506 66.667 0.00 0.00 0.00 5.19
1489 1863 1.153289 CAACCGAGCTGGGGATGAG 60.153 63.158 19.90 0.00 44.64 2.90
1495 1869 3.753294 AGTATTATCAACCGAGCTGGG 57.247 47.619 14.03 14.03 44.64 4.45
1520 1973 5.390885 CGTCCAAATGCATGCATATAGTACC 60.391 44.000 32.36 15.86 35.31 3.34
1521 1974 5.390885 CCGTCCAAATGCATGCATATAGTAC 60.391 44.000 32.36 22.98 35.31 2.73
1522 1975 4.694982 CCGTCCAAATGCATGCATATAGTA 59.305 41.667 32.36 14.85 35.31 1.82
1807 2302 1.451936 GGAAGGTGCAGAGGTGTGT 59.548 57.895 0.00 0.00 0.00 3.72
1808 2303 1.669115 CGGAAGGTGCAGAGGTGTG 60.669 63.158 0.00 0.00 0.00 3.82
1809 2304 2.743718 CGGAAGGTGCAGAGGTGT 59.256 61.111 0.00 0.00 0.00 4.16
1839 3068 0.737715 CGTCTCTGCTTACCTGTGGC 60.738 60.000 0.00 0.00 0.00 5.01
1843 3072 0.528017 TGCTCGTCTCTGCTTACCTG 59.472 55.000 0.00 0.00 0.00 4.00
1844 3073 0.528470 GTGCTCGTCTCTGCTTACCT 59.472 55.000 0.00 0.00 0.00 3.08
1845 3074 0.458716 GGTGCTCGTCTCTGCTTACC 60.459 60.000 0.00 0.00 0.00 2.85
1846 3075 0.798771 CGGTGCTCGTCTCTGCTTAC 60.799 60.000 0.00 0.00 0.00 2.34
1847 3076 1.506718 CGGTGCTCGTCTCTGCTTA 59.493 57.895 0.00 0.00 0.00 3.09
1848 3077 2.259818 CGGTGCTCGTCTCTGCTT 59.740 61.111 0.00 0.00 0.00 3.91
1849 3078 3.753434 CCGGTGCTCGTCTCTGCT 61.753 66.667 0.00 0.00 37.11 4.24
1872 3111 1.297598 GCATGCATCCAACGTACGC 60.298 57.895 16.72 0.00 0.00 4.42
2229 3475 4.980805 TGGTCCCTGTTCGCGCAC 62.981 66.667 8.75 0.00 0.00 5.34
2235 3481 0.677842 ACACGTACTGGTCCCTGTTC 59.322 55.000 0.95 0.00 0.00 3.18
2514 3768 8.965172 CGCTTACTAGTTACACGATTTATTGAT 58.035 33.333 0.00 0.00 0.00 2.57
2522 3776 4.691860 ACACGCTTACTAGTTACACGAT 57.308 40.909 0.00 0.00 0.00 3.73
2524 3778 5.282310 CAGTAACACGCTTACTAGTTACACG 59.718 44.000 0.00 3.18 45.26 4.49
2532 3786 4.811908 TCATTGCAGTAACACGCTTACTA 58.188 39.130 5.93 0.00 33.80 1.82
2538 3792 1.070175 ACGTTCATTGCAGTAACACGC 60.070 47.619 6.84 0.00 0.00 5.34
2539 3793 2.033236 ACACGTTCATTGCAGTAACACG 60.033 45.455 5.73 5.73 0.00 4.49
2544 3798 4.816392 AGTATGACACGTTCATTGCAGTA 58.184 39.130 15.21 0.00 42.87 2.74
2545 3799 3.664107 AGTATGACACGTTCATTGCAGT 58.336 40.909 15.21 0.00 42.87 4.40
2546 3800 3.241773 CGAGTATGACACGTTCATTGCAG 60.242 47.826 15.21 5.60 42.87 4.41
2591 3845 6.487299 AGTATTTCTGGATGGAAGGAGTAC 57.513 41.667 0.00 0.00 0.00 2.73
2592 3846 6.443849 ACAAGTATTTCTGGATGGAAGGAGTA 59.556 38.462 0.00 0.00 0.00 2.59
2594 3848 5.749462 ACAAGTATTTCTGGATGGAAGGAG 58.251 41.667 0.00 0.00 0.00 3.69
2595 3849 5.250543 TGACAAGTATTTCTGGATGGAAGGA 59.749 40.000 0.00 0.00 0.00 3.36
2596 3850 5.500234 TGACAAGTATTTCTGGATGGAAGG 58.500 41.667 0.00 0.00 0.00 3.46
2597 3851 6.825213 TGATGACAAGTATTTCTGGATGGAAG 59.175 38.462 0.00 0.00 0.00 3.46
2598 3852 6.720309 TGATGACAAGTATTTCTGGATGGAA 58.280 36.000 0.00 0.00 0.00 3.53
2599 3853 6.312141 TGATGACAAGTATTTCTGGATGGA 57.688 37.500 0.00 0.00 0.00 3.41
2682 3945 9.218359 CGTCTGAAAATATTTGTCATCAAGATG 57.782 33.333 0.39 3.67 40.09 2.90
2683 3946 9.166173 TCGTCTGAAAATATTTGTCATCAAGAT 57.834 29.630 0.39 0.00 34.88 2.40
2684 3947 8.546597 TCGTCTGAAAATATTTGTCATCAAGA 57.453 30.769 0.39 0.18 34.88 3.02
2685 3948 9.778993 ATTCGTCTGAAAATATTTGTCATCAAG 57.221 29.630 0.39 0.00 37.71 3.02
2686 3949 9.558648 CATTCGTCTGAAAATATTTGTCATCAA 57.441 29.630 0.39 0.87 37.71 2.57
2687 3950 8.183536 CCATTCGTCTGAAAATATTTGTCATCA 58.816 33.333 0.39 1.02 37.71 3.07
2688 3951 8.397906 TCCATTCGTCTGAAAATATTTGTCATC 58.602 33.333 0.39 0.00 37.71 2.92
2689 3952 8.279970 TCCATTCGTCTGAAAATATTTGTCAT 57.720 30.769 0.39 0.00 37.71 3.06
2690 3953 7.390440 ACTCCATTCGTCTGAAAATATTTGTCA 59.610 33.333 0.39 7.08 37.71 3.58
2693 3956 9.869844 GATACTCCATTCGTCTGAAAATATTTG 57.130 33.333 0.39 0.00 37.71 2.32
2696 3959 7.386299 GCAGATACTCCATTCGTCTGAAAATAT 59.614 37.037 4.98 0.00 38.81 1.28
2702 3965 2.362397 GGCAGATACTCCATTCGTCTGA 59.638 50.000 4.98 0.00 38.81 3.27
2709 3972 5.716228 TGTTTTCATTGGCAGATACTCCATT 59.284 36.000 0.00 0.00 31.54 3.16
2711 3974 4.661222 TGTTTTCATTGGCAGATACTCCA 58.339 39.130 0.00 0.00 0.00 3.86
2715 3978 4.016444 TCCCTGTTTTCATTGGCAGATAC 58.984 43.478 0.00 0.00 0.00 2.24
2716 3979 4.263905 ACTCCCTGTTTTCATTGGCAGATA 60.264 41.667 0.00 0.00 0.00 1.98
2717 3980 3.094572 CTCCCTGTTTTCATTGGCAGAT 58.905 45.455 0.00 0.00 0.00 2.90
2718 3981 2.158475 ACTCCCTGTTTTCATTGGCAGA 60.158 45.455 0.00 0.00 0.00 4.26
2719 3982 2.242043 ACTCCCTGTTTTCATTGGCAG 58.758 47.619 0.00 0.00 0.00 4.85
2720 3983 2.380064 ACTCCCTGTTTTCATTGGCA 57.620 45.000 0.00 0.00 0.00 4.92
2721 3984 6.524101 TTATTACTCCCTGTTTTCATTGGC 57.476 37.500 0.00 0.00 0.00 4.52
2722 3985 7.124147 ACCATTATTACTCCCTGTTTTCATTGG 59.876 37.037 0.00 0.00 0.00 3.16
2723 3986 8.066612 ACCATTATTACTCCCTGTTTTCATTG 57.933 34.615 0.00 0.00 0.00 2.82
2724 3987 9.762381 TTACCATTATTACTCCCTGTTTTCATT 57.238 29.630 0.00 0.00 0.00 2.57
2725 3988 9.185680 GTTACCATTATTACTCCCTGTTTTCAT 57.814 33.333 0.00 0.00 0.00 2.57
2726 3989 7.612633 GGTTACCATTATTACTCCCTGTTTTCA 59.387 37.037 0.00 0.00 0.00 2.69
2727 3990 7.612633 TGGTTACCATTATTACTCCCTGTTTTC 59.387 37.037 0.00 0.00 0.00 2.29
2728 3991 7.471890 TGGTTACCATTATTACTCCCTGTTTT 58.528 34.615 0.00 0.00 0.00 2.43
2729 3992 7.034967 TGGTTACCATTATTACTCCCTGTTT 57.965 36.000 0.00 0.00 0.00 2.83
2730 3993 6.216868 ACTGGTTACCATTATTACTCCCTGTT 59.783 38.462 3.88 0.00 30.82 3.16
2731 3994 5.729718 ACTGGTTACCATTATTACTCCCTGT 59.270 40.000 3.88 0.00 30.82 4.00
2732 3995 6.248569 ACTGGTTACCATTATTACTCCCTG 57.751 41.667 3.88 0.00 30.82 4.45
2733 3996 7.072076 CCTTACTGGTTACCATTATTACTCCCT 59.928 40.741 3.88 0.00 30.82 4.20
2734 3997 7.071572 TCCTTACTGGTTACCATTATTACTCCC 59.928 40.741 3.88 0.00 37.07 4.30
2735 3998 8.026396 TCCTTACTGGTTACCATTATTACTCC 57.974 38.462 3.88 0.00 37.07 3.85
2736 3999 9.708092 GATCCTTACTGGTTACCATTATTACTC 57.292 37.037 3.88 0.00 37.07 2.59
2737 4000 9.220906 TGATCCTTACTGGTTACCATTATTACT 57.779 33.333 3.88 0.00 37.07 2.24
2738 4001 9.490379 CTGATCCTTACTGGTTACCATTATTAC 57.510 37.037 3.88 0.00 37.07 1.89
2739 4002 8.656806 CCTGATCCTTACTGGTTACCATTATTA 58.343 37.037 3.88 0.00 37.07 0.98
2740 4003 7.421382 CCCTGATCCTTACTGGTTACCATTATT 60.421 40.741 3.88 0.00 37.07 1.40
2741 4004 6.044404 CCCTGATCCTTACTGGTTACCATTAT 59.956 42.308 3.88 0.00 37.07 1.28
2742 4005 5.368523 CCCTGATCCTTACTGGTTACCATTA 59.631 44.000 3.88 0.00 37.07 1.90
2743 4006 4.166144 CCCTGATCCTTACTGGTTACCATT 59.834 45.833 3.88 1.15 37.07 3.16
2744 4007 3.716872 CCCTGATCCTTACTGGTTACCAT 59.283 47.826 3.88 0.00 37.07 3.55
2745 4008 3.112263 CCCTGATCCTTACTGGTTACCA 58.888 50.000 3.29 3.29 37.07 3.25
2746 4009 3.381335 TCCCTGATCCTTACTGGTTACC 58.619 50.000 0.00 0.00 37.07 2.85
2747 4010 4.287552 TCTCCCTGATCCTTACTGGTTAC 58.712 47.826 0.00 0.00 37.07 2.50
2748 4011 4.620086 TCTCCCTGATCCTTACTGGTTA 57.380 45.455 0.00 0.00 37.07 2.85
2749 4012 3.491766 TCTCCCTGATCCTTACTGGTT 57.508 47.619 0.00 0.00 37.07 3.67
2750 4013 3.715648 ATCTCCCTGATCCTTACTGGT 57.284 47.619 0.00 0.00 37.07 4.00
2751 4014 4.469227 CCATATCTCCCTGATCCTTACTGG 59.531 50.000 0.00 0.00 36.65 4.00
2752 4015 5.046735 CACCATATCTCCCTGATCCTTACTG 60.047 48.000 0.00 0.00 36.65 2.74
2753 4016 5.090139 CACCATATCTCCCTGATCCTTACT 58.910 45.833 0.00 0.00 36.65 2.24
2754 4017 5.087323 TCACCATATCTCCCTGATCCTTAC 58.913 45.833 0.00 0.00 36.65 2.34
2755 4018 5.354184 TCACCATATCTCCCTGATCCTTA 57.646 43.478 0.00 0.00 36.65 2.69
2756 4019 4.219392 TCACCATATCTCCCTGATCCTT 57.781 45.455 0.00 0.00 36.65 3.36
2757 4020 3.931241 TCACCATATCTCCCTGATCCT 57.069 47.619 0.00 0.00 36.65 3.24
2758 4021 4.982241 TTTCACCATATCTCCCTGATCC 57.018 45.455 0.00 0.00 36.65 3.36
2759 4022 4.699257 GCATTTCACCATATCTCCCTGATC 59.301 45.833 0.00 0.00 36.65 2.92
2760 4023 4.105217 TGCATTTCACCATATCTCCCTGAT 59.895 41.667 0.00 0.00 39.11 2.90
2761 4024 3.459227 TGCATTTCACCATATCTCCCTGA 59.541 43.478 0.00 0.00 0.00 3.86
2762 4025 3.824133 TGCATTTCACCATATCTCCCTG 58.176 45.455 0.00 0.00 0.00 4.45
2763 4026 4.141088 ACATGCATTTCACCATATCTCCCT 60.141 41.667 0.00 0.00 0.00 4.20
2764 4027 4.147321 ACATGCATTTCACCATATCTCCC 58.853 43.478 0.00 0.00 0.00 4.30
2765 4028 5.068636 AGACATGCATTTCACCATATCTCC 58.931 41.667 14.98 0.00 0.00 3.71
2766 4029 6.630444 AAGACATGCATTTCACCATATCTC 57.370 37.500 14.98 0.00 26.01 2.75
2767 4030 9.797642 TTATAAGACATGCATTTCACCATATCT 57.202 29.630 14.98 0.00 27.01 1.98
2768 4031 9.831737 GTTATAAGACATGCATTTCACCATATC 57.168 33.333 14.98 5.17 0.00 1.63
2769 4032 9.353431 TGTTATAAGACATGCATTTCACCATAT 57.647 29.630 14.98 9.61 0.00 1.78
2770 4033 8.744568 TGTTATAAGACATGCATTTCACCATA 57.255 30.769 14.98 6.35 0.00 2.74
2771 4034 7.643569 TGTTATAAGACATGCATTTCACCAT 57.356 32.000 14.98 7.21 0.00 3.55
2772 4035 7.459795 TTGTTATAAGACATGCATTTCACCA 57.540 32.000 14.98 0.20 0.00 4.17
2773 4036 9.450807 GTATTGTTATAAGACATGCATTTCACC 57.549 33.333 14.98 0.00 0.00 4.02
2779 4042 9.955208 CATGTTGTATTGTTATAAGACATGCAT 57.045 29.630 0.00 0.00 36.31 3.96
2780 4043 8.404765 CCATGTTGTATTGTTATAAGACATGCA 58.595 33.333 7.43 0.00 38.66 3.96
2781 4044 8.405531 ACCATGTTGTATTGTTATAAGACATGC 58.594 33.333 7.43 0.00 38.66 4.06
2793 4056 9.585099 CAATTTGCTATTACCATGTTGTATTGT 57.415 29.630 0.00 0.00 0.00 2.71
2794 4057 9.585099 ACAATTTGCTATTACCATGTTGTATTG 57.415 29.630 0.00 0.00 0.00 1.90
2798 4061 9.418045 GTTTACAATTTGCTATTACCATGTTGT 57.582 29.630 0.00 0.00 0.00 3.32
2799 4062 9.638239 AGTTTACAATTTGCTATTACCATGTTG 57.362 29.630 0.00 0.00 0.00 3.33
2830 4093 8.974060 TTGAATTGTACCTTCTTTCTTAGTGT 57.026 30.769 6.78 0.00 0.00 3.55
2831 4094 9.057089 ACTTGAATTGTACCTTCTTTCTTAGTG 57.943 33.333 6.78 0.00 0.00 2.74
2832 4095 9.628500 AACTTGAATTGTACCTTCTTTCTTAGT 57.372 29.630 6.78 0.00 0.00 2.24
2833 4096 9.884465 CAACTTGAATTGTACCTTCTTTCTTAG 57.116 33.333 6.78 0.00 0.00 2.18
2834 4097 9.403583 ACAACTTGAATTGTACCTTCTTTCTTA 57.596 29.630 0.00 0.00 41.04 2.10
2835 4098 8.293699 ACAACTTGAATTGTACCTTCTTTCTT 57.706 30.769 0.00 0.00 41.04 2.52
2836 4099 7.254795 CGACAACTTGAATTGTACCTTCTTTCT 60.255 37.037 0.00 0.00 42.89 2.52
2837 4100 6.851330 CGACAACTTGAATTGTACCTTCTTTC 59.149 38.462 0.00 0.00 42.89 2.62
2838 4101 6.725246 CGACAACTTGAATTGTACCTTCTTT 58.275 36.000 0.00 0.00 42.89 2.52
2839 4102 5.277828 GCGACAACTTGAATTGTACCTTCTT 60.278 40.000 0.00 0.00 42.89 2.52
2840 4103 4.213482 GCGACAACTTGAATTGTACCTTCT 59.787 41.667 0.00 0.00 42.89 2.85
2841 4104 4.024387 TGCGACAACTTGAATTGTACCTTC 60.024 41.667 0.00 0.00 42.89 3.46
2842 4105 3.880490 TGCGACAACTTGAATTGTACCTT 59.120 39.130 0.00 0.00 42.89 3.50
2843 4106 3.472652 TGCGACAACTTGAATTGTACCT 58.527 40.909 0.00 0.00 42.89 3.08
2844 4107 3.889196 TGCGACAACTTGAATTGTACC 57.111 42.857 0.00 0.00 42.89 3.34
2845 4108 3.603770 GCATGCGACAACTTGAATTGTAC 59.396 43.478 0.00 0.00 42.89 2.90
2846 4109 3.251972 TGCATGCGACAACTTGAATTGTA 59.748 39.130 14.09 0.00 42.89 2.41
2847 4110 2.034432 TGCATGCGACAACTTGAATTGT 59.966 40.909 14.09 0.00 45.52 2.71
2848 4111 2.663808 TGCATGCGACAACTTGAATTG 58.336 42.857 14.09 0.00 35.59 2.32
2849 4112 3.057386 TGATGCATGCGACAACTTGAATT 60.057 39.130 14.09 0.00 0.00 2.17
2850 4113 2.488937 TGATGCATGCGACAACTTGAAT 59.511 40.909 14.09 0.00 0.00 2.57
2851 4114 1.878734 TGATGCATGCGACAACTTGAA 59.121 42.857 14.09 0.00 0.00 2.69
2852 4115 1.521580 TGATGCATGCGACAACTTGA 58.478 45.000 14.09 0.00 0.00 3.02
2853 4116 2.334971 TTGATGCATGCGACAACTTG 57.665 45.000 20.12 0.00 0.00 3.16
2854 4117 3.057386 TGAATTGATGCATGCGACAACTT 60.057 39.130 24.23 19.48 0.00 2.66
2855 4118 2.488937 TGAATTGATGCATGCGACAACT 59.511 40.909 24.23 17.40 0.00 3.16
2856 4119 2.850060 CTGAATTGATGCATGCGACAAC 59.150 45.455 24.23 16.16 0.00 3.32
2857 4120 2.732912 GCTGAATTGATGCATGCGACAA 60.733 45.455 24.05 24.05 0.00 3.18
2858 4121 1.202211 GCTGAATTGATGCATGCGACA 60.202 47.619 14.09 12.66 0.00 4.35
2859 4122 1.202211 TGCTGAATTGATGCATGCGAC 60.202 47.619 14.09 10.01 0.00 5.19
2860 4123 1.096416 TGCTGAATTGATGCATGCGA 58.904 45.000 14.09 2.48 0.00 5.10
2861 4124 2.051423 GATGCTGAATTGATGCATGCG 58.949 47.619 14.09 0.00 45.90 4.73
2862 4125 2.404215 GGATGCTGAATTGATGCATGC 58.596 47.619 11.82 11.82 45.90 4.06
2863 4126 2.292292 TCGGATGCTGAATTGATGCATG 59.708 45.455 2.46 0.00 45.90 4.06
2865 4128 2.041251 TCGGATGCTGAATTGATGCA 57.959 45.000 0.00 0.00 41.13 3.96
2866 4129 3.425577 TTTCGGATGCTGAATTGATGC 57.574 42.857 0.00 0.00 0.00 3.91
2888 4151 9.064706 GGAGAAATCTGATGTACATGATTCATT 57.935 33.333 14.43 2.58 31.36 2.57
2889 4152 8.438373 AGGAGAAATCTGATGTACATGATTCAT 58.562 33.333 14.43 8.83 31.36 2.57
2890 4153 7.713942 CAGGAGAAATCTGATGTACATGATTCA 59.286 37.037 14.43 4.82 34.36 2.57
2891 4154 7.172875 CCAGGAGAAATCTGATGTACATGATTC 59.827 40.741 14.43 6.07 34.36 2.52
2892 4155 6.996879 CCAGGAGAAATCTGATGTACATGATT 59.003 38.462 14.43 13.62 34.36 2.57
2893 4156 6.328410 TCCAGGAGAAATCTGATGTACATGAT 59.672 38.462 14.43 7.97 34.36 2.45
2894 4157 5.662657 TCCAGGAGAAATCTGATGTACATGA 59.337 40.000 14.43 3.43 34.36 3.07
2895 4158 5.922053 TCCAGGAGAAATCTGATGTACATG 58.078 41.667 14.43 0.00 34.36 3.21
2896 4159 6.328410 TGATCCAGGAGAAATCTGATGTACAT 59.672 38.462 8.43 8.43 34.36 2.29
2897 4160 5.662657 TGATCCAGGAGAAATCTGATGTACA 59.337 40.000 0.00 0.00 34.36 2.90
2898 4161 6.166984 TGATCCAGGAGAAATCTGATGTAC 57.833 41.667 0.00 0.00 34.36 2.90
2899 4162 6.813293 TTGATCCAGGAGAAATCTGATGTA 57.187 37.500 0.00 0.00 34.36 2.29
2900 4163 5.705397 TTGATCCAGGAGAAATCTGATGT 57.295 39.130 0.00 0.00 34.36 3.06
2901 4164 6.376299 TGTTTTGATCCAGGAGAAATCTGATG 59.624 38.462 0.00 0.00 34.36 3.07
2902 4165 6.487828 TGTTTTGATCCAGGAGAAATCTGAT 58.512 36.000 0.00 0.00 34.36 2.90
2903 4166 5.879763 TGTTTTGATCCAGGAGAAATCTGA 58.120 37.500 0.00 0.00 34.36 3.27
2904 4167 6.192234 CTGTTTTGATCCAGGAGAAATCTG 57.808 41.667 0.00 0.00 0.00 2.90
2914 4177 4.520111 TGTGTGATTCCTGTTTTGATCCAG 59.480 41.667 0.00 0.00 0.00 3.86
2915 4178 4.468713 TGTGTGATTCCTGTTTTGATCCA 58.531 39.130 0.00 0.00 0.00 3.41
2916 4179 5.649782 ATGTGTGATTCCTGTTTTGATCC 57.350 39.130 0.00 0.00 0.00 3.36
2917 4180 7.383102 AGTATGTGTGATTCCTGTTTTGATC 57.617 36.000 0.00 0.00 0.00 2.92
2918 4181 7.309377 CCAAGTATGTGTGATTCCTGTTTTGAT 60.309 37.037 0.00 0.00 0.00 2.57
2919 4182 6.016360 CCAAGTATGTGTGATTCCTGTTTTGA 60.016 38.462 0.00 0.00 0.00 2.69
2920 4183 6.016360 TCCAAGTATGTGTGATTCCTGTTTTG 60.016 38.462 0.00 0.00 0.00 2.44
2921 4184 6.068010 TCCAAGTATGTGTGATTCCTGTTTT 58.932 36.000 0.00 0.00 0.00 2.43
2922 4185 5.630121 TCCAAGTATGTGTGATTCCTGTTT 58.370 37.500 0.00 0.00 0.00 2.83
2923 4186 5.241403 TCCAAGTATGTGTGATTCCTGTT 57.759 39.130 0.00 0.00 0.00 3.16
2924 4187 4.908601 TCCAAGTATGTGTGATTCCTGT 57.091 40.909 0.00 0.00 0.00 4.00
2925 4188 4.093408 CGTTCCAAGTATGTGTGATTCCTG 59.907 45.833 0.00 0.00 0.00 3.86
2926 4189 4.020573 TCGTTCCAAGTATGTGTGATTCCT 60.021 41.667 0.00 0.00 0.00 3.36
2927 4190 4.250464 TCGTTCCAAGTATGTGTGATTCC 58.750 43.478 0.00 0.00 0.00 3.01
2928 4191 6.422776 AATCGTTCCAAGTATGTGTGATTC 57.577 37.500 0.00 0.00 0.00 2.52
2929 4192 6.402118 CGAAATCGTTCCAAGTATGTGTGATT 60.402 38.462 0.00 0.00 34.11 2.57
2930 4193 5.063438 CGAAATCGTTCCAAGTATGTGTGAT 59.937 40.000 0.00 0.00 34.11 3.06
2931 4194 4.387559 CGAAATCGTTCCAAGTATGTGTGA 59.612 41.667 0.00 0.00 34.11 3.58
2932 4195 4.435518 CCGAAATCGTTCCAAGTATGTGTG 60.436 45.833 1.79 0.00 37.74 3.82
2933 4196 3.682858 CCGAAATCGTTCCAAGTATGTGT 59.317 43.478 1.79 0.00 37.74 3.72
2934 4197 3.930229 TCCGAAATCGTTCCAAGTATGTG 59.070 43.478 1.79 0.00 37.74 3.21
2935 4198 4.196626 TCCGAAATCGTTCCAAGTATGT 57.803 40.909 1.79 0.00 37.74 2.29
2936 4199 4.570772 ACATCCGAAATCGTTCCAAGTATG 59.429 41.667 1.79 0.00 37.74 2.39
2944 4207 4.083484 ACAAAGGAACATCCGAAATCGTTC 60.083 41.667 1.79 0.00 42.75 3.95
2948 4211 7.415229 GGTTATACAAAGGAACATCCGAAATC 58.585 38.462 0.00 0.00 42.75 2.17
2957 4220 7.463431 AGTGTAATGGGTTATACAAAGGAACA 58.537 34.615 0.00 0.00 35.19 3.18
2958 4221 7.933215 AGTGTAATGGGTTATACAAAGGAAC 57.067 36.000 0.00 0.00 35.19 3.62
2965 4228 9.085645 CATCTACCTAGTGTAATGGGTTATACA 57.914 37.037 0.00 0.00 35.19 2.29
3002 4265 8.978539 CATAGAAAATGCTCATTCCAATCATTG 58.021 33.333 0.00 0.00 0.00 2.82
3003 4266 8.701895 ACATAGAAAATGCTCATTCCAATCATT 58.298 29.630 0.00 0.00 0.00 2.57
3013 4276 7.287005 ACAATCATGGACATAGAAAATGCTCAT 59.713 33.333 0.00 0.00 0.00 2.90
3015 4278 7.035840 ACAATCATGGACATAGAAAATGCTC 57.964 36.000 0.00 0.00 0.00 4.26
3024 4287 7.601886 GGATGACTAGAACAATCATGGACATAG 59.398 40.741 0.00 0.00 33.21 2.23
3050 4313 6.862209 AGAAGAGTTTGTGAGATGCTACTAG 58.138 40.000 0.00 0.00 0.00 2.57
3062 4325 4.865365 GGAGGAATACGAGAAGAGTTTGTG 59.135 45.833 0.00 0.00 0.00 3.33
3104 4367 7.857456 TCCAGAAGTTAAAATATAGAGCACCA 58.143 34.615 0.00 0.00 0.00 4.17
3153 4416 9.461312 ACTTTGTATGGTTGATTGTATGTACAT 57.539 29.630 13.93 13.93 35.89 2.29
3154 4417 8.726068 CACTTTGTATGGTTGATTGTATGTACA 58.274 33.333 0.00 0.00 0.00 2.90
3155 4418 8.941977 TCACTTTGTATGGTTGATTGTATGTAC 58.058 33.333 0.00 0.00 0.00 2.90
3156 4419 9.679661 ATCACTTTGTATGGTTGATTGTATGTA 57.320 29.630 0.00 0.00 0.00 2.29
3157 4420 7.994425 TCACTTTGTATGGTTGATTGTATGT 57.006 32.000 0.00 0.00 0.00 2.29
3158 4421 8.676401 TGATCACTTTGTATGGTTGATTGTATG 58.324 33.333 0.00 0.00 0.00 2.39
3159 4422 8.677300 GTGATCACTTTGTATGGTTGATTGTAT 58.323 33.333 18.83 0.00 0.00 2.29
3160 4423 7.120579 GGTGATCACTTTGTATGGTTGATTGTA 59.879 37.037 24.50 0.00 0.00 2.41
3161 4424 6.071952 GGTGATCACTTTGTATGGTTGATTGT 60.072 38.462 24.50 0.00 0.00 2.71
3162 4425 6.324819 GGTGATCACTTTGTATGGTTGATTG 58.675 40.000 24.50 0.00 0.00 2.67
3163 4426 5.418840 GGGTGATCACTTTGTATGGTTGATT 59.581 40.000 24.50 0.00 0.00 2.57
3164 4427 4.949856 GGGTGATCACTTTGTATGGTTGAT 59.050 41.667 24.50 0.00 0.00 2.57
3165 4428 4.202514 TGGGTGATCACTTTGTATGGTTGA 60.203 41.667 24.50 0.00 0.00 3.18
3166 4429 4.078537 TGGGTGATCACTTTGTATGGTTG 58.921 43.478 24.50 0.00 0.00 3.77
3167 4430 4.380843 TGGGTGATCACTTTGTATGGTT 57.619 40.909 24.50 0.00 0.00 3.67
3168 4431 4.380843 TTGGGTGATCACTTTGTATGGT 57.619 40.909 24.50 0.00 0.00 3.55
3169 4432 5.299279 GGTATTGGGTGATCACTTTGTATGG 59.701 44.000 24.50 0.00 0.00 2.74
3170 4433 5.885352 TGGTATTGGGTGATCACTTTGTATG 59.115 40.000 24.50 0.00 0.00 2.39
3171 4434 6.073447 TGGTATTGGGTGATCACTTTGTAT 57.927 37.500 24.50 13.25 0.00 2.29
3172 4435 5.013704 ACTGGTATTGGGTGATCACTTTGTA 59.986 40.000 24.50 10.75 0.00 2.41
3173 4436 4.202567 ACTGGTATTGGGTGATCACTTTGT 60.203 41.667 24.50 11.65 0.00 2.83
3174 4437 4.335416 ACTGGTATTGGGTGATCACTTTG 58.665 43.478 24.50 8.04 0.00 2.77
3175 4438 4.657814 ACTGGTATTGGGTGATCACTTT 57.342 40.909 24.50 10.03 0.00 2.66
3176 4439 4.657814 AACTGGTATTGGGTGATCACTT 57.342 40.909 24.50 10.36 0.00 3.16
3177 4440 4.657814 AAACTGGTATTGGGTGATCACT 57.342 40.909 24.50 8.13 0.00 3.41
3178 4441 6.601613 TCATAAAACTGGTATTGGGTGATCAC 59.398 38.462 17.91 17.91 0.00 3.06
3179 4442 6.726379 TCATAAAACTGGTATTGGGTGATCA 58.274 36.000 0.00 0.00 0.00 2.92
3180 4443 7.639113 TTCATAAAACTGGTATTGGGTGATC 57.361 36.000 0.00 0.00 0.00 2.92
3181 4444 7.453126 TGTTTCATAAAACTGGTATTGGGTGAT 59.547 33.333 0.00 0.00 44.23 3.06
3182 4445 6.778069 TGTTTCATAAAACTGGTATTGGGTGA 59.222 34.615 0.00 0.00 44.23 4.02
3183 4446 6.987386 TGTTTCATAAAACTGGTATTGGGTG 58.013 36.000 0.00 0.00 44.23 4.61
3184 4447 7.310361 CCATGTTTCATAAAACTGGTATTGGGT 60.310 37.037 0.00 0.00 44.23 4.51
3185 4448 7.041107 CCATGTTTCATAAAACTGGTATTGGG 58.959 38.462 0.00 0.00 44.23 4.12
3186 4449 7.835822 TCCATGTTTCATAAAACTGGTATTGG 58.164 34.615 8.79 0.00 44.23 3.16
3187 4450 9.703892 TTTCCATGTTTCATAAAACTGGTATTG 57.296 29.630 8.79 0.00 44.23 1.90
3188 4451 9.705290 GTTTCCATGTTTCATAAAACTGGTATT 57.295 29.630 8.79 0.00 44.23 1.89
3189 4452 9.088987 AGTTTCCATGTTTCATAAAACTGGTAT 57.911 29.630 15.21 0.00 44.23 2.73
3190 4453 8.472007 AGTTTCCATGTTTCATAAAACTGGTA 57.528 30.769 15.21 0.11 44.23 3.25
3191 4454 7.360113 AGTTTCCATGTTTCATAAAACTGGT 57.640 32.000 15.21 0.00 44.23 4.00
3192 4455 9.927668 ATTAGTTTCCATGTTTCATAAAACTGG 57.072 29.630 20.22 12.33 44.23 4.00
3205 4468 9.912634 CACAGAACATTTAATTAGTTTCCATGT 57.087 29.630 0.00 0.00 0.00 3.21
3206 4469 9.912634 ACACAGAACATTTAATTAGTTTCCATG 57.087 29.630 0.00 0.00 0.00 3.66
3212 4475 9.357161 TGGGTTACACAGAACATTTAATTAGTT 57.643 29.630 0.00 0.00 0.00 2.24
3213 4476 8.927675 TGGGTTACACAGAACATTTAATTAGT 57.072 30.769 0.00 0.00 0.00 2.24
3214 4477 8.458843 CCTGGGTTACACAGAACATTTAATTAG 58.541 37.037 17.16 0.00 38.20 1.73
3215 4478 8.164733 TCCTGGGTTACACAGAACATTTAATTA 58.835 33.333 17.16 0.00 38.20 1.40
3216 4479 7.007723 TCCTGGGTTACACAGAACATTTAATT 58.992 34.615 17.16 0.00 38.20 1.40
3217 4480 6.548321 TCCTGGGTTACACAGAACATTTAAT 58.452 36.000 17.16 0.00 38.20 1.40
3218 4481 5.942961 TCCTGGGTTACACAGAACATTTAA 58.057 37.500 17.16 0.00 38.20 1.52
3219 4482 5.570205 TCCTGGGTTACACAGAACATTTA 57.430 39.130 17.16 0.00 38.20 1.40
3220 4483 4.447138 TCCTGGGTTACACAGAACATTT 57.553 40.909 17.16 0.00 38.20 2.32
3221 4484 4.141251 AGTTCCTGGGTTACACAGAACATT 60.141 41.667 17.16 1.83 38.20 2.71
3222 4485 3.394606 AGTTCCTGGGTTACACAGAACAT 59.605 43.478 17.16 6.24 38.20 2.71
3223 4486 2.775384 AGTTCCTGGGTTACACAGAACA 59.225 45.455 17.16 0.00 38.20 3.18
3224 4487 3.487120 AGTTCCTGGGTTACACAGAAC 57.513 47.619 17.16 16.72 38.20 3.01
3225 4488 5.546499 AGATTAGTTCCTGGGTTACACAGAA 59.454 40.000 17.16 5.84 38.20 3.02
3226 4489 5.091552 AGATTAGTTCCTGGGTTACACAGA 58.908 41.667 17.16 0.00 38.20 3.41
3227 4490 5.422214 AGATTAGTTCCTGGGTTACACAG 57.578 43.478 7.79 7.79 35.74 3.66
3228 4491 5.836024 AAGATTAGTTCCTGGGTTACACA 57.164 39.130 0.00 0.00 0.00 3.72
3229 4492 6.990939 GGATAAGATTAGTTCCTGGGTTACAC 59.009 42.308 0.00 0.00 0.00 2.90
3230 4493 6.183360 CGGATAAGATTAGTTCCTGGGTTACA 60.183 42.308 0.00 0.00 0.00 2.41
3231 4494 6.221659 CGGATAAGATTAGTTCCTGGGTTAC 58.778 44.000 0.00 0.00 0.00 2.50
3232 4495 5.221581 GCGGATAAGATTAGTTCCTGGGTTA 60.222 44.000 0.00 0.00 0.00 2.85
3233 4496 4.444449 GCGGATAAGATTAGTTCCTGGGTT 60.444 45.833 0.00 0.00 0.00 4.11
3234 4497 3.071167 GCGGATAAGATTAGTTCCTGGGT 59.929 47.826 0.00 0.00 0.00 4.51
3235 4498 3.325135 AGCGGATAAGATTAGTTCCTGGG 59.675 47.826 0.00 0.00 0.00 4.45
3236 4499 4.608948 AGCGGATAAGATTAGTTCCTGG 57.391 45.455 0.00 0.00 0.00 4.45
3237 4500 6.538742 TCAAAAGCGGATAAGATTAGTTCCTG 59.461 38.462 0.00 0.00 0.00 3.86
3238 4501 6.650120 TCAAAAGCGGATAAGATTAGTTCCT 58.350 36.000 0.00 0.00 0.00 3.36
3239 4502 6.920569 TCAAAAGCGGATAAGATTAGTTCC 57.079 37.500 0.00 0.00 0.00 3.62
3240 4503 7.377131 GCATTCAAAAGCGGATAAGATTAGTTC 59.623 37.037 0.00 0.00 0.00 3.01
3241 4504 7.067494 AGCATTCAAAAGCGGATAAGATTAGTT 59.933 33.333 0.00 0.00 35.48 2.24
3242 4505 6.543831 AGCATTCAAAAGCGGATAAGATTAGT 59.456 34.615 0.00 0.00 35.48 2.24
3243 4506 6.963796 AGCATTCAAAAGCGGATAAGATTAG 58.036 36.000 0.00 0.00 35.48 1.73
3244 4507 6.942532 AGCATTCAAAAGCGGATAAGATTA 57.057 33.333 0.00 0.00 35.48 1.75
3245 4508 5.841957 AGCATTCAAAAGCGGATAAGATT 57.158 34.783 0.00 0.00 35.48 2.40
3246 4509 5.825507 GAAGCATTCAAAAGCGGATAAGAT 58.174 37.500 0.00 0.00 46.62 2.40
3247 4510 5.235305 GAAGCATTCAAAAGCGGATAAGA 57.765 39.130 0.00 0.00 46.62 2.10
3266 4529 0.095935 CAGCACCGATCAAAGCGAAG 59.904 55.000 0.00 0.00 0.00 3.79
3267 4530 1.911293 GCAGCACCGATCAAAGCGAA 61.911 55.000 0.00 0.00 0.00 4.70
3268 4531 2.390599 GCAGCACCGATCAAAGCGA 61.391 57.895 0.00 0.00 0.00 4.93
3269 4532 2.099062 GCAGCACCGATCAAAGCG 59.901 61.111 0.00 0.00 0.00 4.68
3270 4533 2.486966 GGCAGCACCGATCAAAGC 59.513 61.111 0.00 0.00 0.00 3.51
3271 4534 1.243342 TTGGGCAGCACCGATCAAAG 61.243 55.000 0.00 0.00 40.62 2.77
3272 4535 0.825425 TTTGGGCAGCACCGATCAAA 60.825 50.000 0.00 0.00 40.62 2.69
3273 4536 1.228398 TTTGGGCAGCACCGATCAA 60.228 52.632 0.00 0.00 40.62 2.57
3274 4537 1.675310 CTTTGGGCAGCACCGATCA 60.675 57.895 0.00 0.00 40.62 2.92
3275 4538 1.648467 GACTTTGGGCAGCACCGATC 61.648 60.000 0.00 0.00 40.62 3.69
3276 4539 1.675641 GACTTTGGGCAGCACCGAT 60.676 57.895 0.00 0.00 40.62 4.18
3277 4540 2.281484 GACTTTGGGCAGCACCGA 60.281 61.111 0.00 0.00 40.62 4.69
3278 4541 3.365265 GGACTTTGGGCAGCACCG 61.365 66.667 0.00 0.00 40.62 4.94
3279 4542 1.527433 GAAGGACTTTGGGCAGCACC 61.527 60.000 0.00 0.00 37.93 5.01
3280 4543 0.538287 AGAAGGACTTTGGGCAGCAC 60.538 55.000 0.00 0.00 0.00 4.40
3281 4544 0.185901 AAGAAGGACTTTGGGCAGCA 59.814 50.000 0.00 0.00 34.94 4.41
3282 4545 0.600057 CAAGAAGGACTTTGGGCAGC 59.400 55.000 0.00 0.00 36.61 5.25
3283 4546 1.202927 TCCAAGAAGGACTTTGGGCAG 60.203 52.381 3.66 0.00 43.07 4.85
3284 4547 0.850100 TCCAAGAAGGACTTTGGGCA 59.150 50.000 3.66 0.00 43.07 5.36
3285 4548 1.539157 CTCCAAGAAGGACTTTGGGC 58.461 55.000 3.66 0.00 43.07 5.36
3286 4549 1.425448 ACCTCCAAGAAGGACTTTGGG 59.575 52.381 3.66 0.00 43.07 4.12
3287 4550 2.959465 ACCTCCAAGAAGGACTTTGG 57.041 50.000 0.00 0.00 43.07 3.28
3288 4551 5.828328 AGTTTTACCTCCAAGAAGGACTTTG 59.172 40.000 0.00 0.00 43.07 2.77
3289 4552 6.014771 AGTTTTACCTCCAAGAAGGACTTT 57.985 37.500 0.00 0.00 43.07 2.66
3290 4553 5.648330 AGTTTTACCTCCAAGAAGGACTT 57.352 39.130 0.00 0.00 43.07 3.01
3291 4554 5.456330 GGAAGTTTTACCTCCAAGAAGGACT 60.456 44.000 0.00 0.00 43.07 3.85
3292 4555 4.760715 GGAAGTTTTACCTCCAAGAAGGAC 59.239 45.833 0.00 0.00 43.07 3.85
3293 4556 4.414182 TGGAAGTTTTACCTCCAAGAAGGA 59.586 41.667 0.00 0.00 46.75 3.36
3294 4557 4.725490 TGGAAGTTTTACCTCCAAGAAGG 58.275 43.478 0.00 0.00 42.55 3.46
3295 4558 5.416013 GGATGGAAGTTTTACCTCCAAGAAG 59.584 44.000 1.57 0.00 33.85 2.85
3296 4559 5.321927 GGATGGAAGTTTTACCTCCAAGAA 58.678 41.667 1.57 0.00 33.85 2.52
3297 4560 4.263771 GGGATGGAAGTTTTACCTCCAAGA 60.264 45.833 1.57 0.00 33.85 3.02
3298 4561 4.017126 GGGATGGAAGTTTTACCTCCAAG 58.983 47.826 1.57 0.00 33.85 3.61
3299 4562 3.660669 AGGGATGGAAGTTTTACCTCCAA 59.339 43.478 1.57 0.00 33.85 3.53
3300 4563 3.010138 CAGGGATGGAAGTTTTACCTCCA 59.990 47.826 0.00 0.00 34.72 3.86
3301 4564 3.621558 CAGGGATGGAAGTTTTACCTCC 58.378 50.000 0.00 0.00 0.00 4.30
3302 4565 3.265995 TCCAGGGATGGAAGTTTTACCTC 59.734 47.826 0.00 0.00 34.56 3.85
3303 4566 3.265489 TCCAGGGATGGAAGTTTTACCT 58.735 45.455 0.00 0.00 34.56 3.08
3304 4567 3.732048 TCCAGGGATGGAAGTTTTACC 57.268 47.619 0.00 0.00 34.56 2.85
3305 4568 6.263168 CACATATCCAGGGATGGAAGTTTTAC 59.737 42.308 11.08 0.00 41.90 2.01
3306 4569 6.364701 CACATATCCAGGGATGGAAGTTTTA 58.635 40.000 11.08 0.00 41.90 1.52
3307 4570 5.203528 CACATATCCAGGGATGGAAGTTTT 58.796 41.667 11.08 0.00 41.90 2.43
3308 4571 4.386761 CCACATATCCAGGGATGGAAGTTT 60.387 45.833 11.08 0.00 41.90 2.66
3309 4572 3.139025 CCACATATCCAGGGATGGAAGTT 59.861 47.826 11.08 0.00 41.90 2.66
3310 4573 2.713167 CCACATATCCAGGGATGGAAGT 59.287 50.000 11.08 1.77 41.90 3.01
3311 4574 2.981784 TCCACATATCCAGGGATGGAAG 59.018 50.000 11.08 1.20 41.90 3.46
3312 4575 2.981784 CTCCACATATCCAGGGATGGAA 59.018 50.000 11.08 0.00 41.90 3.53
3313 4576 2.624495 CTCCACATATCCAGGGATGGA 58.376 52.381 11.08 9.28 42.91 3.41
3314 4577 1.004044 GCTCCACATATCCAGGGATGG 59.996 57.143 11.08 5.29 36.17 3.51
3315 4578 1.983691 AGCTCCACATATCCAGGGATG 59.016 52.381 11.08 6.17 36.17 3.51
3316 4579 1.983691 CAGCTCCACATATCCAGGGAT 59.016 52.381 6.04 6.04 38.54 3.85
3317 4580 1.427809 CAGCTCCACATATCCAGGGA 58.572 55.000 0.00 0.00 0.00 4.20
3318 4581 0.250640 GCAGCTCCACATATCCAGGG 60.251 60.000 0.00 0.00 0.00 4.45
3319 4582 0.763652 AGCAGCTCCACATATCCAGG 59.236 55.000 0.00 0.00 0.00 4.45
3320 4583 1.880271 CAGCAGCTCCACATATCCAG 58.120 55.000 0.00 0.00 0.00 3.86
3321 4584 0.179037 GCAGCAGCTCCACATATCCA 60.179 55.000 0.00 0.00 37.91 3.41
3322 4585 2.626582 GCAGCAGCTCCACATATCC 58.373 57.895 0.00 0.00 37.91 2.59
3333 4596 1.367659 AAGATCTTTCGAGCAGCAGC 58.632 50.000 0.88 0.00 42.56 5.25
3334 4597 3.424861 CGATAAGATCTTTCGAGCAGCAG 59.575 47.826 23.82 0.00 34.92 4.24
3335 4598 3.181486 ACGATAAGATCTTTCGAGCAGCA 60.181 43.478 29.74 8.56 36.73 4.41
3336 4599 3.376540 ACGATAAGATCTTTCGAGCAGC 58.623 45.455 29.74 11.29 36.73 5.25
3337 4600 5.746245 AGAAACGATAAGATCTTTCGAGCAG 59.254 40.000 29.74 14.02 36.73 4.24
3338 4601 5.516696 CAGAAACGATAAGATCTTTCGAGCA 59.483 40.000 29.74 10.35 36.73 4.26
3339 4602 5.744345 TCAGAAACGATAAGATCTTTCGAGC 59.256 40.000 29.74 21.64 36.73 5.03
3340 4603 7.149208 CGATCAGAAACGATAAGATCTTTCGAG 60.149 40.741 29.74 17.07 36.73 4.04
3341 4604 6.633234 CGATCAGAAACGATAAGATCTTTCGA 59.367 38.462 29.74 16.70 36.73 3.71
3342 4605 6.633234 TCGATCAGAAACGATAAGATCTTTCG 59.367 38.462 25.20 25.20 38.76 3.46
3343 4606 7.096394 GGTCGATCAGAAACGATAAGATCTTTC 60.096 40.741 14.36 9.94 40.50 2.62
3344 4607 6.697892 GGTCGATCAGAAACGATAAGATCTTT 59.302 38.462 14.36 1.45 40.50 2.52
3345 4608 6.183360 TGGTCGATCAGAAACGATAAGATCTT 60.183 38.462 13.56 13.56 40.50 2.40
3346 4609 5.299531 TGGTCGATCAGAAACGATAAGATCT 59.700 40.000 0.00 0.00 40.50 2.75
3347 4610 5.520632 TGGTCGATCAGAAACGATAAGATC 58.479 41.667 0.00 0.00 40.50 2.75
3348 4611 5.515797 TGGTCGATCAGAAACGATAAGAT 57.484 39.130 0.00 0.00 40.50 2.40
3349 4612 4.976224 TGGTCGATCAGAAACGATAAGA 57.024 40.909 0.00 0.00 40.50 2.10
3350 4613 6.589830 ATTTGGTCGATCAGAAACGATAAG 57.410 37.500 0.00 0.00 40.50 1.73
3351 4614 6.477688 GGTATTTGGTCGATCAGAAACGATAA 59.522 38.462 0.00 0.00 40.50 1.75
3352 4615 5.981315 GGTATTTGGTCGATCAGAAACGATA 59.019 40.000 0.00 0.00 40.50 2.92
3353 4616 4.809426 GGTATTTGGTCGATCAGAAACGAT 59.191 41.667 0.00 0.00 40.50 3.73
3354 4617 4.178540 GGTATTTGGTCGATCAGAAACGA 58.821 43.478 0.00 0.00 36.18 3.85
3355 4618 3.308866 GGGTATTTGGTCGATCAGAAACG 59.691 47.826 0.00 0.00 0.00 3.60
3356 4619 3.626217 GGGGTATTTGGTCGATCAGAAAC 59.374 47.826 0.00 0.00 0.00 2.78
3357 4620 3.264706 TGGGGTATTTGGTCGATCAGAAA 59.735 43.478 0.00 0.00 0.00 2.52
3358 4621 2.841266 TGGGGTATTTGGTCGATCAGAA 59.159 45.455 0.00 0.00 0.00 3.02
3359 4622 2.473070 TGGGGTATTTGGTCGATCAGA 58.527 47.619 0.00 0.00 0.00 3.27
3360 4623 2.943033 GTTGGGGTATTTGGTCGATCAG 59.057 50.000 0.00 0.00 0.00 2.90
3361 4624 2.306219 TGTTGGGGTATTTGGTCGATCA 59.694 45.455 0.00 0.00 0.00 2.92
3362 4625 2.943033 CTGTTGGGGTATTTGGTCGATC 59.057 50.000 0.00 0.00 0.00 3.69
3363 4626 2.944094 GCTGTTGGGGTATTTGGTCGAT 60.944 50.000 0.00 0.00 0.00 3.59
3364 4627 1.612199 GCTGTTGGGGTATTTGGTCGA 60.612 52.381 0.00 0.00 0.00 4.20
3365 4628 0.808755 GCTGTTGGGGTATTTGGTCG 59.191 55.000 0.00 0.00 0.00 4.79
3366 4629 1.182667 GGCTGTTGGGGTATTTGGTC 58.817 55.000 0.00 0.00 0.00 4.02
3367 4630 0.252057 GGGCTGTTGGGGTATTTGGT 60.252 55.000 0.00 0.00 0.00 3.67
3368 4631 0.252012 TGGGCTGTTGGGGTATTTGG 60.252 55.000 0.00 0.00 0.00 3.28
3369 4632 1.864669 ATGGGCTGTTGGGGTATTTG 58.135 50.000 0.00 0.00 0.00 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.