Multiple sequence alignment - TraesCS1A01G145100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G145100 chr1A 100.000 7091 0 0 1 7091 251340949 251348039 0.000000e+00 13095.0
1 TraesCS1A01G145100 chr1A 92.727 55 2 2 2930 2984 519270357 519270409 2.120000e-10 78.7
2 TraesCS1A01G145100 chr1D 90.432 1944 122 20 2864 4800 199602370 199604256 0.000000e+00 2501.0
3 TraesCS1A01G145100 chr1D 94.719 1155 39 12 1686 2821 468557686 468556535 0.000000e+00 1775.0
4 TraesCS1A01G145100 chr1D 94.545 1155 44 8 1685 2821 460551930 460550777 0.000000e+00 1766.0
5 TraesCS1A01G145100 chr1D 93.858 1156 47 12 1685 2818 386948004 386946851 0.000000e+00 1720.0
6 TraesCS1A01G145100 chr1D 87.919 1341 84 32 1 1306 199599722 199601019 0.000000e+00 1507.0
7 TraesCS1A01G145100 chr1D 93.227 1004 50 7 1836 2821 149533884 149532881 0.000000e+00 1461.0
8 TraesCS1A01G145100 chr1D 92.857 728 29 8 4932 5658 199604288 199604993 0.000000e+00 1035.0
9 TraesCS1A01G145100 chr1D 83.415 820 72 38 6264 7072 199607328 199608094 0.000000e+00 702.0
10 TraesCS1A01G145100 chr1D 87.200 500 44 11 5750 6236 199606847 199607339 1.040000e-152 551.0
11 TraesCS1A01G145100 chr1D 89.796 147 13 2 6805 6950 14741223 14741078 3.380000e-43 187.0
12 TraesCS1A01G145100 chr1D 97.872 94 2 0 5658 5751 199605251 199605344 5.690000e-36 163.0
13 TraesCS1A01G145100 chr1D 92.727 55 2 2 2930 2984 423268599 423268651 2.120000e-10 78.7
14 TraesCS1A01G145100 chr1D 88.060 67 5 3 2920 2984 233792189 233792124 7.630000e-10 76.8
15 TraesCS1A01G145100 chr1B 96.497 1142 30 8 3703 4840 280169359 280170494 0.000000e+00 1879.0
16 TraesCS1A01G145100 chr1B 89.580 1334 81 22 4932 6236 280170491 280171795 0.000000e+00 1640.0
17 TraesCS1A01G145100 chr1B 90.745 1221 67 17 1 1191 280166763 280167967 0.000000e+00 1587.0
18 TraesCS1A01G145100 chr1B 95.574 723 30 1 2949 3671 280168643 280169363 0.000000e+00 1157.0
19 TraesCS1A01G145100 chr1B 84.217 811 57 27 6264 7066 280171784 280172531 0.000000e+00 723.0
20 TraesCS1A01G145100 chr1B 88.060 201 9 2 1437 1622 280168283 280168483 2.570000e-54 224.0
21 TraesCS1A01G145100 chr1B 100.000 52 0 0 2829 2880 280168568 280168619 5.850000e-16 97.1
22 TraesCS1A01G145100 chr1B 100.000 43 0 0 1622 1664 280168517 280168559 5.900000e-11 80.5
23 TraesCS1A01G145100 chr1B 94.231 52 1 2 2933 2984 572646915 572646964 2.120000e-10 78.7
24 TraesCS1A01G145100 chr1B 100.000 28 0 0 2896 2923 280168615 280168642 1.300000e-02 52.8
25 TraesCS1A01G145100 chr2D 94.204 1156 46 10 1685 2821 205593633 205592480 0.000000e+00 1744.0
26 TraesCS1A01G145100 chr2D 93.446 946 48 5 1890 2821 408348003 408347058 0.000000e+00 1391.0
27 TraesCS1A01G145100 chr2D 92.797 944 54 6 1890 2820 375261196 375262138 0.000000e+00 1354.0
28 TraesCS1A01G145100 chr2D 89.333 300 30 2 4499 4798 326681202 326680905 6.720000e-100 375.0
29 TraesCS1A01G145100 chr2D 81.716 268 34 8 6824 7091 62565933 62566185 7.210000e-50 209.0
30 TraesCS1A01G145100 chr2D 85.393 178 26 0 4934 5111 326680854 326680677 1.210000e-42 185.0
31 TraesCS1A01G145100 chr2D 89.844 128 9 4 4836 4961 125112762 125112637 2.050000e-35 161.0
32 TraesCS1A01G145100 chr2D 100.000 33 0 0 2937 2969 645944470 645944438 2.140000e-05 62.1
33 TraesCS1A01G145100 chr3A 94.010 1152 51 8 1688 2821 738073890 738075041 0.000000e+00 1729.0
34 TraesCS1A01G145100 chr5D 93.772 1156 51 10 1685 2821 310265939 310267092 0.000000e+00 1716.0
35 TraesCS1A01G145100 chr5D 93.139 1166 58 11 1685 2831 298961351 298962513 0.000000e+00 1690.0
36 TraesCS1A01G145100 chr5D 84.615 182 23 4 4932 5111 483518017 483518195 7.310000e-40 176.0
37 TraesCS1A01G145100 chr2B 92.347 1163 63 17 1684 2822 207702848 207704008 0.000000e+00 1631.0
38 TraesCS1A01G145100 chr4A 91.441 1145 78 9 1692 2822 395676335 395677473 0.000000e+00 1554.0
39 TraesCS1A01G145100 chr4A 78.185 518 88 17 4284 4798 680587444 680586949 2.480000e-79 307.0
40 TraesCS1A01G145100 chr4A 88.742 151 14 3 6805 6953 190826662 190826811 1.570000e-41 182.0
41 TraesCS1A01G145100 chr7D 93.227 1004 49 9 1836 2821 139938233 139939235 0.000000e+00 1459.0
42 TraesCS1A01G145100 chr7D 93.235 946 50 5 1890 2821 516070949 516070004 0.000000e+00 1380.0
43 TraesCS1A01G145100 chr7D 92.600 946 54 7 1890 2821 478076505 478075562 0.000000e+00 1345.0
44 TraesCS1A01G145100 chrUn 93.552 946 47 5 1890 2821 147948668 147949613 0.000000e+00 1397.0
45 TraesCS1A01G145100 chr3D 92.389 946 57 6 1890 2821 388789910 388788966 0.000000e+00 1334.0
46 TraesCS1A01G145100 chr3D 94.340 106 3 3 4836 4939 448433605 448433709 7.360000e-35 159.0
47 TraesCS1A01G145100 chr7B 83.042 401 46 9 4405 4800 453752192 453751809 1.890000e-90 344.0
48 TraesCS1A01G145100 chr7B 95.370 108 2 3 4833 4937 516786886 516786993 1.220000e-37 169.0
49 TraesCS1A01G145100 chr6B 82.294 401 49 9 4405 4800 560807103 560806720 1.910000e-85 327.0
50 TraesCS1A01G145100 chr6B 82.045 401 50 9 4405 4800 712151397 712151780 8.870000e-84 322.0
51 TraesCS1A01G145100 chr6B 93.750 48 1 2 2937 2984 630523264 630523219 3.550000e-08 71.3
52 TraesCS1A01G145100 chr4D 77.950 517 91 14 4284 4798 474014201 474013706 1.160000e-77 302.0
53 TraesCS1A01G145100 chr4D 90.104 192 17 2 6824 7014 82143611 82143801 1.530000e-61 248.0
54 TraesCS1A01G145100 chr4D 94.393 107 4 2 4832 4936 13198275 13198381 5.690000e-36 163.0
55 TraesCS1A01G145100 chr4D 95.098 102 3 2 4837 4936 177433303 177433202 7.360000e-35 159.0
56 TraesCS1A01G145100 chr4D 91.964 112 7 2 4831 4940 12354802 12354691 9.520000e-34 156.0
57 TraesCS1A01G145100 chr4D 84.416 154 24 0 1039 1192 474016732 474016579 1.230000e-32 152.0
58 TraesCS1A01G145100 chr4B 77.992 518 89 15 4284 4798 597033965 597033470 1.160000e-77 302.0
59 TraesCS1A01G145100 chr4B 84.643 280 41 2 6814 7091 652249074 652249353 1.950000e-70 278.0
60 TraesCS1A01G145100 chr4B 84.416 154 24 0 1039 1192 597036487 597036334 1.230000e-32 152.0
61 TraesCS1A01G145100 chr4B 85.714 98 11 3 3285 3379 597035701 597035604 4.530000e-17 100.0
62 TraesCS1A01G145100 chr4B 96.875 32 1 0 2929 2960 577005154 577005185 4.000000e-03 54.7
63 TraesCS1A01G145100 chr6D 89.933 149 11 4 6805 6951 93633270 93633416 9.390000e-44 189.0
64 TraesCS1A01G145100 chr3B 90.370 135 10 3 6827 6959 564032092 564031959 2.630000e-39 174.0
65 TraesCS1A01G145100 chr2A 95.455 110 3 2 4836 4943 68155923 68155814 2.630000e-39 174.0
66 TraesCS1A01G145100 chr2A 96.078 102 2 2 4837 4936 660286773 660286874 1.580000e-36 165.0
67 TraesCS1A01G145100 chr7A 93.578 109 3 4 4834 4940 61815918 61816024 7.360000e-35 159.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G145100 chr1A 251340949 251348039 7090 False 13095.000000 13095 100.000000 1 7091 1 chr1A.!!$F1 7090
1 TraesCS1A01G145100 chr1D 468556535 468557686 1151 True 1775.000000 1775 94.719000 1686 2821 1 chr1D.!!$R6 1135
2 TraesCS1A01G145100 chr1D 460550777 460551930 1153 True 1766.000000 1766 94.545000 1685 2821 1 chr1D.!!$R5 1136
3 TraesCS1A01G145100 chr1D 386946851 386948004 1153 True 1720.000000 1720 93.858000 1685 2818 1 chr1D.!!$R4 1133
4 TraesCS1A01G145100 chr1D 149532881 149533884 1003 True 1461.000000 1461 93.227000 1836 2821 1 chr1D.!!$R2 985
5 TraesCS1A01G145100 chr1D 199599722 199608094 8372 False 1076.500000 2501 89.949167 1 7072 6 chr1D.!!$F2 7071
6 TraesCS1A01G145100 chr1B 280166763 280172531 5768 False 826.711111 1879 93.852556 1 7066 9 chr1B.!!$F2 7065
7 TraesCS1A01G145100 chr2D 205592480 205593633 1153 True 1744.000000 1744 94.204000 1685 2821 1 chr2D.!!$R2 1136
8 TraesCS1A01G145100 chr2D 408347058 408348003 945 True 1391.000000 1391 93.446000 1890 2821 1 chr2D.!!$R3 931
9 TraesCS1A01G145100 chr2D 375261196 375262138 942 False 1354.000000 1354 92.797000 1890 2820 1 chr2D.!!$F2 930
10 TraesCS1A01G145100 chr2D 326680677 326681202 525 True 280.000000 375 87.363000 4499 5111 2 chr2D.!!$R5 612
11 TraesCS1A01G145100 chr3A 738073890 738075041 1151 False 1729.000000 1729 94.010000 1688 2821 1 chr3A.!!$F1 1133
12 TraesCS1A01G145100 chr5D 310265939 310267092 1153 False 1716.000000 1716 93.772000 1685 2821 1 chr5D.!!$F2 1136
13 TraesCS1A01G145100 chr5D 298961351 298962513 1162 False 1690.000000 1690 93.139000 1685 2831 1 chr5D.!!$F1 1146
14 TraesCS1A01G145100 chr2B 207702848 207704008 1160 False 1631.000000 1631 92.347000 1684 2822 1 chr2B.!!$F1 1138
15 TraesCS1A01G145100 chr4A 395676335 395677473 1138 False 1554.000000 1554 91.441000 1692 2822 1 chr4A.!!$F2 1130
16 TraesCS1A01G145100 chr7D 139938233 139939235 1002 False 1459.000000 1459 93.227000 1836 2821 1 chr7D.!!$F1 985
17 TraesCS1A01G145100 chr7D 516070004 516070949 945 True 1380.000000 1380 93.235000 1890 2821 1 chr7D.!!$R2 931
18 TraesCS1A01G145100 chr7D 478075562 478076505 943 True 1345.000000 1345 92.600000 1890 2821 1 chr7D.!!$R1 931
19 TraesCS1A01G145100 chrUn 147948668 147949613 945 False 1397.000000 1397 93.552000 1890 2821 1 chrUn.!!$F1 931
20 TraesCS1A01G145100 chr3D 388788966 388789910 944 True 1334.000000 1334 92.389000 1890 2821 1 chr3D.!!$R1 931
21 TraesCS1A01G145100 chr4D 474013706 474016732 3026 True 227.000000 302 81.183000 1039 4798 2 chr4D.!!$R3 3759

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
781 798 0.303493 TGAAGAGTTGCGCGTTTCAC 59.697 50.000 8.43 0.0 0.00 3.18 F
784 801 0.304705 AGAGTTGCGCGTTTCACTTG 59.695 50.000 8.43 0.0 0.00 3.16 F
1686 2848 0.463116 AAACGTGACTTTGCCCTCGT 60.463 50.000 0.00 0.0 34.57 4.18 F
2261 3451 0.250901 GGACATTGGGATCGGATGGG 60.251 60.000 0.00 0.0 0.00 4.00 F
2394 4019 1.066858 GTCAGATGTGTGGTGACGGAT 60.067 52.381 0.00 0.0 31.87 4.18 F
3264 4903 2.097104 ACGAGTTTGTTATGTCGTTGCG 60.097 45.455 0.00 0.0 42.81 4.85 F
4393 6963 1.072159 AAGAAAGCGCACTCCTGCT 59.928 52.632 11.47 0.0 44.97 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1667 2829 0.463116 ACGAGGGCAAAGTCACGTTT 60.463 50.000 0.00 0.00 0.00 3.60 R
2051 3237 0.469892 CAAGGTGGCCAAGGTTTCCT 60.470 55.000 7.24 5.57 33.87 3.36 R
2696 4321 1.067295 AGACCAAAGCCACCATCTCA 58.933 50.000 0.00 0.00 0.00 3.27 R
3760 6279 3.183793 TGACTATCTCGTGCATTGCAT 57.816 42.857 15.49 0.37 41.91 3.96 R
4386 6956 3.066342 CCATAATGCAAAGTCAGCAGGAG 59.934 47.826 0.00 0.00 46.36 3.69 R
4515 7086 0.915364 AGAATGGCTCACCCTCCTTC 59.085 55.000 0.00 0.00 33.59 3.46 R
6375 10748 0.257039 AGCTAACCAAGGATGCCCTG 59.743 55.000 0.00 0.00 43.48 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 7.403312 TCTGTTTTGTCCTGATTTCTTTTGA 57.597 32.000 0.00 0.00 0.00 2.69
48 49 4.639755 TGACTGTGTGCTGATTTCTGAAAA 59.360 37.500 6.95 0.00 0.00 2.29
205 206 7.277098 CCATTTGCTTGATCTTGTCCTATTTTG 59.723 37.037 0.00 0.00 0.00 2.44
219 220 4.003648 CCTATTTTGAACAAGCGGAGTCT 58.996 43.478 0.00 0.00 0.00 3.24
246 247 4.310769 ACTGATGCCGTAATTATCTCTGC 58.689 43.478 0.00 0.00 0.00 4.26
290 291 3.454447 TGGTGAAGGTCGGTATCATTGAT 59.546 43.478 4.28 4.28 0.00 2.57
353 354 5.336102 AGGTACTTACTGGCTACAACCTTA 58.664 41.667 0.00 0.00 32.21 2.69
371 382 7.776969 ACAACCTTATGCTCATGATAGTTGATT 59.223 33.333 16.91 0.00 36.47 2.57
442 453 3.814842 CCTTGTTATCTTGCAGTGTGTCA 59.185 43.478 0.00 0.00 0.00 3.58
551 562 3.560068 GGATTACTAAGCCATGAACACGG 59.440 47.826 0.00 0.00 36.80 4.94
633 645 8.745837 CCATCTTTGATGTAATTTTATTGTCGC 58.254 33.333 6.78 0.00 0.00 5.19
749 766 4.081642 GGAACTGATTAGTGACACCTGCTA 60.082 45.833 0.84 0.00 37.19 3.49
779 796 2.316119 AATGAAGAGTTGCGCGTTTC 57.684 45.000 8.43 0.00 0.00 2.78
780 797 1.225855 ATGAAGAGTTGCGCGTTTCA 58.774 45.000 8.43 8.50 32.90 2.69
781 798 0.303493 TGAAGAGTTGCGCGTTTCAC 59.697 50.000 8.43 0.00 0.00 3.18
782 799 0.582005 GAAGAGTTGCGCGTTTCACT 59.418 50.000 8.43 4.54 0.00 3.41
783 800 1.003866 GAAGAGTTGCGCGTTTCACTT 60.004 47.619 8.43 8.76 0.00 3.16
784 801 0.304705 AGAGTTGCGCGTTTCACTTG 59.695 50.000 8.43 0.00 0.00 3.16
788 820 2.096174 AGTTGCGCGTTTCACTTGTTTA 59.904 40.909 8.43 0.00 0.00 2.01
834 873 0.586802 GTCCCTTGTTCTGCACGTTC 59.413 55.000 0.00 0.00 0.00 3.95
849 888 7.026562 TCTGCACGTTCCATTGTAAAATAATG 58.973 34.615 0.00 0.00 35.75 1.90
862 905 6.616947 TGTAAAATAATGAAGTCTTTGGCCG 58.383 36.000 0.00 0.00 0.00 6.13
863 906 4.718940 AAATAATGAAGTCTTTGGCCGG 57.281 40.909 0.00 0.00 0.00 6.13
906 949 1.968493 AGGTTTGAGTAGCGACCAAGA 59.032 47.619 0.00 0.00 34.60 3.02
921 964 1.196808 CCAAGATTCCGTTTCCGTGTG 59.803 52.381 0.00 0.00 0.00 3.82
944 987 2.558359 GGAATTGTTTGACAGTGGGAGG 59.442 50.000 0.00 0.00 0.00 4.30
970 1013 2.819284 CCCGGGATAGTTGGCTCCC 61.819 68.421 18.48 0.00 46.59 4.30
975 1018 1.749033 GATAGTTGGCTCCCCTCCG 59.251 63.158 0.00 0.00 0.00 4.63
1012 1057 3.917760 GAGAGATGGCGGGGTCGG 61.918 72.222 0.00 0.00 36.79 4.79
1013 1058 4.458829 AGAGATGGCGGGGTCGGA 62.459 66.667 0.00 0.00 36.79 4.55
1014 1059 3.917760 GAGATGGCGGGGTCGGAG 61.918 72.222 0.00 0.00 36.79 4.63
1116 1161 1.153823 GAGCATGTACGTCTGCGGT 60.154 57.895 10.78 0.00 43.17 5.68
1192 1237 0.649475 CGTCCTCTACAGGTACGTCG 59.351 60.000 0.00 0.00 41.28 5.12
1196 1241 1.002257 TCTACAGGTACGTCGGCCA 60.002 57.895 2.24 0.00 0.00 5.36
1215 1260 2.357034 GCCTCCTGTGCGTTTCGA 60.357 61.111 0.00 0.00 0.00 3.71
1216 1261 1.959226 GCCTCCTGTGCGTTTCGAA 60.959 57.895 0.00 0.00 0.00 3.71
1217 1262 1.298859 GCCTCCTGTGCGTTTCGAAT 61.299 55.000 0.00 0.00 0.00 3.34
1218 1263 2.004583 CCTCCTGTGCGTTTCGAATA 57.995 50.000 0.00 0.00 0.00 1.75
1220 1265 2.540101 CCTCCTGTGCGTTTCGAATATC 59.460 50.000 0.00 0.00 0.00 1.63
1221 1266 3.448686 CTCCTGTGCGTTTCGAATATCT 58.551 45.455 0.00 0.00 0.00 1.98
1222 1267 3.186909 TCCTGTGCGTTTCGAATATCTG 58.813 45.455 0.00 0.00 0.00 2.90
1223 1268 2.930040 CCTGTGCGTTTCGAATATCTGT 59.070 45.455 0.00 0.00 0.00 3.41
1224 1269 3.370978 CCTGTGCGTTTCGAATATCTGTT 59.629 43.478 0.00 0.00 0.00 3.16
1225 1270 4.565166 CCTGTGCGTTTCGAATATCTGTTA 59.435 41.667 0.00 0.00 0.00 2.41
1226 1271 5.062934 CCTGTGCGTTTCGAATATCTGTTAA 59.937 40.000 0.00 0.00 0.00 2.01
1227 1272 5.849858 TGTGCGTTTCGAATATCTGTTAAC 58.150 37.500 0.00 0.00 0.00 2.01
1228 1273 5.405873 TGTGCGTTTCGAATATCTGTTAACA 59.594 36.000 8.28 8.28 0.00 2.41
1229 1274 5.952064 GTGCGTTTCGAATATCTGTTAACAG 59.048 40.000 26.60 26.60 45.08 3.16
1230 1275 4.956184 GCGTTTCGAATATCTGTTAACAGC 59.044 41.667 27.49 13.97 43.46 4.40
1249 1294 3.295800 GGTTGGAGACCCGTCGAT 58.704 61.111 0.00 0.00 43.06 3.59
1250 1295 2.496942 GGTTGGAGACCCGTCGATA 58.503 57.895 0.00 0.00 43.06 2.92
1272 1317 1.548986 GATTGGCTGAAATTTCGCCG 58.451 50.000 30.67 17.78 44.26 6.46
1275 1320 0.891449 TGGCTGAAATTTCGCCGGAA 60.891 50.000 30.67 20.03 44.26 4.30
1306 1352 3.317149 GTCAAAACCCGCTTTCCTAAACT 59.683 43.478 0.00 0.00 0.00 2.66
1307 1353 3.566742 TCAAAACCCGCTTTCCTAAACTC 59.433 43.478 0.00 0.00 0.00 3.01
1308 1354 3.503800 AAACCCGCTTTCCTAAACTCT 57.496 42.857 0.00 0.00 0.00 3.24
1309 1355 3.503800 AACCCGCTTTCCTAAACTCTT 57.496 42.857 0.00 0.00 0.00 2.85
1311 1357 3.828921 ACCCGCTTTCCTAAACTCTTTT 58.171 40.909 0.00 0.00 0.00 2.27
1312 1358 4.212716 ACCCGCTTTCCTAAACTCTTTTT 58.787 39.130 0.00 0.00 0.00 1.94
1331 1377 1.593196 TTTTGAGAAGGCAGGTGTCG 58.407 50.000 0.00 0.00 0.00 4.35
1332 1378 0.884704 TTTGAGAAGGCAGGTGTCGC 60.885 55.000 0.00 0.00 0.00 5.19
1333 1379 2.038814 TTGAGAAGGCAGGTGTCGCA 62.039 55.000 0.00 0.00 0.00 5.10
1362 1408 2.124151 CCACTACATGGGCCAGCC 60.124 66.667 13.78 0.00 45.95 4.85
1423 1470 7.533289 TTTTCGGGTATTTTTCTCTCCATTT 57.467 32.000 0.00 0.00 0.00 2.32
1424 1471 6.509418 TTCGGGTATTTTTCTCTCCATTTG 57.491 37.500 0.00 0.00 0.00 2.32
1426 1473 6.007703 TCGGGTATTTTTCTCTCCATTTGTT 58.992 36.000 0.00 0.00 0.00 2.83
1427 1474 6.072175 TCGGGTATTTTTCTCTCCATTTGTTG 60.072 38.462 0.00 0.00 0.00 3.33
1429 1476 7.362920 CGGGTATTTTTCTCTCCATTTGTTGAT 60.363 37.037 0.00 0.00 0.00 2.57
1430 1477 8.314021 GGGTATTTTTCTCTCCATTTGTTGATT 58.686 33.333 0.00 0.00 0.00 2.57
1664 2826 6.811665 TGAGATTTAGTTACACGGACATCAAG 59.188 38.462 0.00 0.00 0.00 3.02
1665 2827 5.581085 AGATTTAGTTACACGGACATCAAGC 59.419 40.000 0.00 0.00 0.00 4.01
1666 2828 2.831685 AGTTACACGGACATCAAGCA 57.168 45.000 0.00 0.00 0.00 3.91
1667 2829 3.120321 AGTTACACGGACATCAAGCAA 57.880 42.857 0.00 0.00 0.00 3.91
1668 2830 3.472652 AGTTACACGGACATCAAGCAAA 58.527 40.909 0.00 0.00 0.00 3.68
1670 2832 2.774439 ACACGGACATCAAGCAAAAC 57.226 45.000 0.00 0.00 0.00 2.43
1671 2833 1.002900 ACACGGACATCAAGCAAAACG 60.003 47.619 0.00 0.00 0.00 3.60
1672 2834 1.002900 CACGGACATCAAGCAAAACGT 60.003 47.619 0.00 0.00 0.00 3.99
1673 2835 1.002900 ACGGACATCAAGCAAAACGTG 60.003 47.619 0.00 0.00 31.60 4.49
1674 2836 1.262950 CGGACATCAAGCAAAACGTGA 59.737 47.619 0.00 0.00 41.18 4.35
1675 2837 2.650608 GGACATCAAGCAAAACGTGAC 58.349 47.619 0.00 0.00 39.69 3.67
1676 2838 2.290641 GGACATCAAGCAAAACGTGACT 59.709 45.455 0.00 0.00 39.69 3.41
1677 2839 3.243068 GGACATCAAGCAAAACGTGACTT 60.243 43.478 0.00 0.00 39.69 3.01
1678 2840 4.351192 GACATCAAGCAAAACGTGACTTT 58.649 39.130 0.00 0.00 39.69 2.66
1679 2841 4.104776 ACATCAAGCAAAACGTGACTTTG 58.895 39.130 6.80 6.80 39.69 2.77
1684 2846 2.119671 CAAAACGTGACTTTGCCCTC 57.880 50.000 0.00 0.00 0.00 4.30
1685 2847 0.661020 AAAACGTGACTTTGCCCTCG 59.339 50.000 0.00 0.00 0.00 4.63
1686 2848 0.463116 AAACGTGACTTTGCCCTCGT 60.463 50.000 0.00 0.00 34.57 4.18
1687 2849 0.878961 AACGTGACTTTGCCCTCGTC 60.879 55.000 0.00 0.00 32.40 4.20
1688 2850 2.027625 CGTGACTTTGCCCTCGTCC 61.028 63.158 0.00 0.00 0.00 4.79
1725 2888 4.176752 CCCCTAGGGCGACTTGGC 62.177 72.222 23.84 0.00 40.30 4.52
1989 3165 0.554792 CCCTTCCATGCATCCCTTCT 59.445 55.000 0.00 0.00 0.00 2.85
2039 3225 1.134401 CGGTGTATTCTGGTGGAGCAT 60.134 52.381 0.00 0.00 0.00 3.79
2221 3410 2.344500 CTCCCCGTGCACCGTAAA 59.656 61.111 12.15 0.00 33.66 2.01
2235 3424 1.338769 CCGTAAACTTCCTGGAGGTGG 60.339 57.143 12.63 5.49 36.34 4.61
2261 3451 0.250901 GGACATTGGGATCGGATGGG 60.251 60.000 0.00 0.00 0.00 4.00
2339 3964 7.552687 TGTTTCTTTCTACATATTCTTGGCGAT 59.447 33.333 0.00 0.00 0.00 4.58
2394 4019 1.066858 GTCAGATGTGTGGTGACGGAT 60.067 52.381 0.00 0.00 31.87 4.18
2411 4036 2.131294 GATACGCGCAGGAGGTCGAT 62.131 60.000 5.73 0.00 0.00 3.59
3099 4738 5.825593 TTGTCAAGACTTCTGAGGGTTAT 57.174 39.130 1.53 0.00 0.00 1.89
3104 4743 8.383175 TGTCAAGACTTCTGAGGGTTATATTTT 58.617 33.333 1.53 0.00 0.00 1.82
3108 4747 8.943909 AGACTTCTGAGGGTTATATTTTTACG 57.056 34.615 0.00 0.00 0.00 3.18
3112 4751 7.120923 TCTGAGGGTTATATTTTTACGCTCT 57.879 36.000 15.52 0.00 46.19 4.09
3126 4765 7.964545 TTTTACGCTCTGTTTTCTTTCTTTC 57.035 32.000 0.00 0.00 0.00 2.62
3164 4803 6.817140 GGTGTTATCTTCGATAGTTGAACCTT 59.183 38.462 0.00 0.00 37.40 3.50
3168 4807 8.543774 GTTATCTTCGATAGTTGAACCTTGATG 58.456 37.037 0.00 0.00 37.40 3.07
3184 4823 4.142513 CCTTGATGCTTGCTCTAAACTTCC 60.143 45.833 0.00 0.00 0.00 3.46
3264 4903 2.097104 ACGAGTTTGTTATGTCGTTGCG 60.097 45.455 0.00 0.00 42.81 4.85
3451 5484 5.221422 GGAAACTTTTGGTCATGTTGGATGA 60.221 40.000 0.00 0.00 0.00 2.92
3583 6101 9.762381 AATTCCCTGTTTTGTTATAATGGAGTA 57.238 29.630 0.00 0.00 0.00 2.59
3673 6191 3.565902 GGGTTTCAAACTCACTTCTGGAG 59.434 47.826 0.00 0.00 38.36 3.86
3674 6192 3.003793 GGTTTCAAACTCACTTCTGGAGC 59.996 47.826 0.00 0.00 35.79 4.70
3680 6198 5.360714 TCAAACTCACTTCTGGAGCAAATTT 59.639 36.000 0.00 0.00 35.79 1.82
3695 6214 8.601546 TGGAGCAAATTTCCCATTAAAATAGTT 58.398 29.630 0.00 0.00 33.62 2.24
3760 6279 4.405358 GTCATTTTCAATATCTTGGGGGCA 59.595 41.667 0.00 0.00 32.95 5.36
3767 6286 5.779061 TCAATATCTTGGGGGCATGCAATG 61.779 45.833 21.36 4.44 39.08 2.82
3997 6520 7.277174 ACTCAACTACATTTCCTCCAAAAAG 57.723 36.000 0.00 0.00 0.00 2.27
4106 6639 6.295462 CCATTCCATGAAATCAAACCTTCAGT 60.295 38.462 0.00 0.00 35.14 3.41
4186 6719 8.990163 ACTTTTACCGGTTCCATAATTCATAT 57.010 30.769 15.04 0.00 0.00 1.78
4238 6808 7.482654 TCTACTTGTATATGCAAATGACAGC 57.517 36.000 7.66 0.00 0.00 4.40
4386 6956 1.724623 TGTCGATACAAGAAAGCGCAC 59.275 47.619 11.47 0.00 30.91 5.34
4393 6963 1.072159 AAGAAAGCGCACTCCTGCT 59.928 52.632 11.47 0.00 44.97 4.24
4511 7082 6.966534 ATCCTTCACATTTTCTGTTCAGTT 57.033 33.333 0.00 0.00 35.29 3.16
4515 7086 4.350346 TCACATTTTCTGTTCAGTTTGCG 58.650 39.130 0.00 0.00 35.29 4.85
4844 7425 7.875327 TGCTTTCCAGTTAAAATATACTCCC 57.125 36.000 0.00 0.00 0.00 4.30
4845 7426 7.639378 TGCTTTCCAGTTAAAATATACTCCCT 58.361 34.615 0.00 0.00 0.00 4.20
4846 7427 7.773690 TGCTTTCCAGTTAAAATATACTCCCTC 59.226 37.037 0.00 0.00 0.00 4.30
4847 7428 7.228906 GCTTTCCAGTTAAAATATACTCCCTCC 59.771 40.741 0.00 0.00 0.00 4.30
4848 7429 6.415206 TCCAGTTAAAATATACTCCCTCCG 57.585 41.667 0.00 0.00 0.00 4.63
4849 7430 5.901276 TCCAGTTAAAATATACTCCCTCCGT 59.099 40.000 0.00 0.00 0.00 4.69
4850 7431 6.041296 TCCAGTTAAAATATACTCCCTCCGTC 59.959 42.308 0.00 0.00 0.00 4.79
4851 7432 6.221659 CAGTTAAAATATACTCCCTCCGTCC 58.778 44.000 0.00 0.00 0.00 4.79
4852 7433 5.306419 AGTTAAAATATACTCCCTCCGTCCC 59.694 44.000 0.00 0.00 0.00 4.46
4853 7434 3.339713 AAATATACTCCCTCCGTCCCA 57.660 47.619 0.00 0.00 0.00 4.37
4854 7435 3.339713 AATATACTCCCTCCGTCCCAA 57.660 47.619 0.00 0.00 0.00 4.12
4855 7436 2.852714 TATACTCCCTCCGTCCCAAA 57.147 50.000 0.00 0.00 0.00 3.28
4856 7437 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
4857 7438 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
4858 7439 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
4859 7440 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
4860 7441 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
4861 7442 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
4862 7443 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
4863 7444 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
4864 7445 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
4865 7446 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
4866 7447 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
4867 7448 2.671396 CCGTCCCAAAATAAGTGTCTCG 59.329 50.000 0.00 0.00 0.00 4.04
4868 7449 3.581755 CGTCCCAAAATAAGTGTCTCGA 58.418 45.455 0.00 0.00 0.00 4.04
4869 7450 3.367025 CGTCCCAAAATAAGTGTCTCGAC 59.633 47.826 0.00 0.00 0.00 4.20
4870 7451 4.566987 GTCCCAAAATAAGTGTCTCGACT 58.433 43.478 0.00 0.00 0.00 4.18
4871 7452 4.995487 GTCCCAAAATAAGTGTCTCGACTT 59.005 41.667 0.00 0.00 39.54 3.01
4872 7453 5.469084 GTCCCAAAATAAGTGTCTCGACTTT 59.531 40.000 0.00 0.00 37.38 2.66
4873 7454 5.468746 TCCCAAAATAAGTGTCTCGACTTTG 59.531 40.000 0.00 0.61 37.38 2.77
4874 7455 5.238650 CCCAAAATAAGTGTCTCGACTTTGT 59.761 40.000 0.00 0.00 37.38 2.83
4875 7456 6.425721 CCCAAAATAAGTGTCTCGACTTTGTA 59.574 38.462 0.00 0.00 37.38 2.41
4876 7457 7.288672 CCAAAATAAGTGTCTCGACTTTGTAC 58.711 38.462 0.00 0.00 37.38 2.90
4877 7458 7.170998 CCAAAATAAGTGTCTCGACTTTGTACT 59.829 37.037 0.00 0.00 37.38 2.73
4878 7459 9.188588 CAAAATAAGTGTCTCGACTTTGTACTA 57.811 33.333 0.00 0.00 37.38 1.82
4879 7460 9.754382 AAAATAAGTGTCTCGACTTTGTACTAA 57.246 29.630 0.00 0.00 37.38 2.24
4880 7461 8.739649 AATAAGTGTCTCGACTTTGTACTAAC 57.260 34.615 0.00 0.00 37.38 2.34
4881 7462 6.388435 AAGTGTCTCGACTTTGTACTAACT 57.612 37.500 0.00 0.00 31.92 2.24
4882 7463 6.388435 AGTGTCTCGACTTTGTACTAACTT 57.612 37.500 0.00 0.00 0.00 2.66
4883 7464 6.803642 AGTGTCTCGACTTTGTACTAACTTT 58.196 36.000 0.00 0.00 0.00 2.66
4884 7465 7.934457 AGTGTCTCGACTTTGTACTAACTTTA 58.066 34.615 0.00 0.00 0.00 1.85
4885 7466 8.074972 AGTGTCTCGACTTTGTACTAACTTTAG 58.925 37.037 0.00 0.00 36.82 1.85
4886 7467 7.859875 GTGTCTCGACTTTGTACTAACTTTAGT 59.140 37.037 6.85 6.85 45.39 2.24
4887 7468 9.056005 TGTCTCGACTTTGTACTAACTTTAGTA 57.944 33.333 4.98 4.98 43.36 1.82
4912 7493 8.429493 ACAAAGTTGTACTAAGGTTAAGACAC 57.571 34.615 0.00 0.00 40.16 3.67
4913 7494 8.262933 ACAAAGTTGTACTAAGGTTAAGACACT 58.737 33.333 0.00 0.00 40.16 3.55
4914 7495 9.106070 CAAAGTTGTACTAAGGTTAAGACACTT 57.894 33.333 0.00 0.00 0.00 3.16
4922 7503 8.631480 ACTAAGGTTAAGACACTTATTTTGGG 57.369 34.615 0.00 0.00 0.00 4.12
4923 7504 8.442374 ACTAAGGTTAAGACACTTATTTTGGGA 58.558 33.333 0.00 0.00 0.00 4.37
4924 7505 7.520451 AAGGTTAAGACACTTATTTTGGGAC 57.480 36.000 0.00 0.00 0.00 4.46
4925 7506 5.704053 AGGTTAAGACACTTATTTTGGGACG 59.296 40.000 0.00 0.00 0.00 4.79
4926 7507 5.702209 GGTTAAGACACTTATTTTGGGACGA 59.298 40.000 0.00 0.00 0.00 4.20
4927 7508 6.128363 GGTTAAGACACTTATTTTGGGACGAG 60.128 42.308 0.00 0.00 0.00 4.18
4928 7509 3.939066 AGACACTTATTTTGGGACGAGG 58.061 45.455 0.00 0.00 0.00 4.63
4929 7510 3.581332 AGACACTTATTTTGGGACGAGGA 59.419 43.478 0.00 0.00 0.00 3.71
4930 7511 3.933332 GACACTTATTTTGGGACGAGGAG 59.067 47.826 0.00 0.00 0.00 3.69
4950 7531 7.095607 CGAGGAGTATATCATTTGTTTGTAGCC 60.096 40.741 0.00 0.00 0.00 3.93
5101 7682 1.475280 TCTGGCCGTGTGTACTACATC 59.525 52.381 0.00 0.00 42.24 3.06
5111 7692 6.430308 CCGTGTGTACTACATCTATCAGGTAT 59.570 42.308 0.00 0.00 42.24 2.73
5123 7704 9.407380 ACATCTATCAGGTATTTAATGTTTGCA 57.593 29.630 0.00 0.00 0.00 4.08
5148 7729 4.910304 ACTTAATGTCAGGATGCTCCCTAT 59.090 41.667 0.00 0.00 37.19 2.57
5156 7737 5.707764 GTCAGGATGCTCCCTATTTTTATCC 59.292 44.000 0.00 0.00 37.19 2.59
5228 7811 3.692690 ACCCAGACTCTACAAGACTCTC 58.307 50.000 0.00 0.00 0.00 3.20
5290 7874 2.962253 GTACCAGCAGGCGATCGC 60.962 66.667 31.52 31.52 39.06 4.58
5347 7931 3.849911 ACACATGTCGAACGATCTTCAT 58.150 40.909 0.00 0.00 0.00 2.57
5350 7934 4.207224 CACATGTCGAACGATCTTCATACC 59.793 45.833 0.00 0.00 0.00 2.73
5365 7949 2.536997 ATACCACAGGCGCCCTTGAC 62.537 60.000 26.15 0.00 0.00 3.18
5435 8019 4.941263 TGAAGGTATTTACGCTGCATCTTT 59.059 37.500 0.00 0.00 0.00 2.52
5453 8037 6.307318 GCATCTTTAGTTTTGCAGTTGATGAG 59.693 38.462 0.00 0.00 35.22 2.90
5646 8240 0.472471 AACAGCCCGAGGAGAAACAA 59.528 50.000 0.00 0.00 0.00 2.83
5647 8241 0.035458 ACAGCCCGAGGAGAAACAAG 59.965 55.000 0.00 0.00 0.00 3.16
5684 8536 1.893808 CTCTGGTTGCCTTGCACGT 60.894 57.895 0.00 0.00 38.71 4.49
5763 10119 8.470002 GCTGAGGTAAATTTATTGGTCTTGATT 58.530 33.333 0.31 0.00 0.00 2.57
5764 10120 9.793252 CTGAGGTAAATTTATTGGTCTTGATTG 57.207 33.333 0.31 0.00 0.00 2.67
5765 10121 9.527157 TGAGGTAAATTTATTGGTCTTGATTGA 57.473 29.630 0.31 0.00 0.00 2.57
5822 10179 6.154534 TCTGGGGGTCGAAGATATATATGTTG 59.845 42.308 9.70 3.56 40.67 3.33
5880 10238 3.290948 AACTTGTAGGTGGTGAAGCAA 57.709 42.857 0.00 0.00 0.00 3.91
5891 10249 2.224378 TGGTGAAGCAACTGAAGGAGAG 60.224 50.000 0.00 0.00 0.00 3.20
5966 10324 2.125753 AAGCGCTGCGAGGAAGAG 60.126 61.111 28.07 0.00 0.00 2.85
6077 10441 3.618690 ACCATCTGAACCAGAACTAGC 57.381 47.619 0.43 0.00 44.04 3.42
6085 10449 4.887748 TGAACCAGAACTAGCTGAAGAAG 58.112 43.478 0.00 0.00 38.14 2.85
6093 10457 4.598257 GCTGAAGAAGCGTAGGCA 57.402 55.556 10.48 0.00 43.45 4.75
6094 10458 3.071580 GCTGAAGAAGCGTAGGCAT 57.928 52.632 10.48 0.00 43.45 4.40
6095 10459 2.225068 GCTGAAGAAGCGTAGGCATA 57.775 50.000 10.48 0.00 43.45 3.14
6096 10460 2.760374 GCTGAAGAAGCGTAGGCATAT 58.240 47.619 10.48 0.00 43.45 1.78
6097 10461 3.914312 GCTGAAGAAGCGTAGGCATATA 58.086 45.455 10.48 0.00 43.45 0.86
6098 10462 3.675698 GCTGAAGAAGCGTAGGCATATAC 59.324 47.826 10.48 0.00 43.45 1.47
6099 10463 4.238514 CTGAAGAAGCGTAGGCATATACC 58.761 47.826 10.48 0.00 43.41 2.73
6100 10464 3.639561 TGAAGAAGCGTAGGCATATACCA 59.360 43.478 10.48 0.00 43.41 3.25
6101 10465 3.944055 AGAAGCGTAGGCATATACCAG 57.056 47.619 10.48 0.00 43.41 4.00
6102 10466 3.231818 AGAAGCGTAGGCATATACCAGT 58.768 45.455 10.48 0.00 43.41 4.00
6104 10468 4.217983 AGAAGCGTAGGCATATACCAGTAC 59.782 45.833 10.48 0.00 43.41 2.73
6105 10469 2.824341 AGCGTAGGCATATACCAGTACC 59.176 50.000 10.48 0.00 43.41 3.34
6106 10470 2.094338 GCGTAGGCATATACCAGTACCC 60.094 54.545 1.75 0.00 39.62 3.69
6108 10472 3.767673 CGTAGGCATATACCAGTACCCAT 59.232 47.826 0.00 0.00 0.00 4.00
6109 10473 4.222145 CGTAGGCATATACCAGTACCCATT 59.778 45.833 0.00 0.00 0.00 3.16
6110 10474 5.419788 CGTAGGCATATACCAGTACCCATTA 59.580 44.000 0.00 0.00 0.00 1.90
6111 10475 6.097839 CGTAGGCATATACCAGTACCCATTAT 59.902 42.308 0.00 0.00 0.00 1.28
6113 10477 5.790618 AGGCATATACCAGTACCCATTATGT 59.209 40.000 0.00 0.00 0.00 2.29
6114 10478 6.274672 AGGCATATACCAGTACCCATTATGTT 59.725 38.462 0.00 0.00 0.00 2.71
6115 10479 6.598064 GGCATATACCAGTACCCATTATGTTC 59.402 42.308 0.00 0.00 0.00 3.18
6116 10480 7.165485 GCATATACCAGTACCCATTATGTTCA 58.835 38.462 0.00 0.00 0.00 3.18
6117 10481 7.334421 GCATATACCAGTACCCATTATGTTCAG 59.666 40.741 0.00 0.00 0.00 3.02
6146 10511 3.952967 ACGTAGGTAGAATGAAGGACTCC 59.047 47.826 0.00 0.00 0.00 3.85
6152 10517 1.134280 AGAATGAAGGACTCCGCATGG 60.134 52.381 7.11 0.00 0.00 3.66
6175 10546 4.788690 CGTGCCATGTGTTTACAAATACA 58.211 39.130 6.72 6.72 42.76 2.29
6177 10548 4.621034 GTGCCATGTGTTTACAAATACAGC 59.379 41.667 9.62 8.80 42.05 4.40
6192 10563 7.615403 ACAAATACAGCTGTAGAATGAGAGAA 58.385 34.615 29.05 6.37 33.52 2.87
6196 10567 9.757227 AATACAGCTGTAGAATGAGAGAATAAC 57.243 33.333 29.05 0.00 33.52 1.89
6199 10570 5.663106 AGCTGTAGAATGAGAGAATAACCCA 59.337 40.000 0.00 0.00 0.00 4.51
6200 10571 6.328672 AGCTGTAGAATGAGAGAATAACCCAT 59.671 38.462 0.00 0.00 0.00 4.00
6202 10573 7.041508 GCTGTAGAATGAGAGAATAACCCATTG 60.042 40.741 0.00 0.00 0.00 2.82
6203 10574 8.089625 TGTAGAATGAGAGAATAACCCATTGA 57.910 34.615 0.00 0.00 0.00 2.57
6204 10575 8.717717 TGTAGAATGAGAGAATAACCCATTGAT 58.282 33.333 0.00 0.00 0.00 2.57
6231 10602 4.406648 TCTCAGCTGTTGACAAGAAGAA 57.593 40.909 14.67 0.00 0.00 2.52
6232 10603 4.375272 TCTCAGCTGTTGACAAGAAGAAG 58.625 43.478 14.67 0.00 0.00 2.85
6233 10604 4.100035 TCTCAGCTGTTGACAAGAAGAAGA 59.900 41.667 14.67 0.99 0.00 2.87
6234 10605 4.769688 TCAGCTGTTGACAAGAAGAAGAA 58.230 39.130 14.67 0.00 0.00 2.52
6235 10606 4.813161 TCAGCTGTTGACAAGAAGAAGAAG 59.187 41.667 14.67 0.00 0.00 2.85
6236 10607 4.813161 CAGCTGTTGACAAGAAGAAGAAGA 59.187 41.667 5.25 0.00 0.00 2.87
6237 10608 5.295292 CAGCTGTTGACAAGAAGAAGAAGAA 59.705 40.000 5.25 0.00 0.00 2.52
6238 10609 5.526846 AGCTGTTGACAAGAAGAAGAAGAAG 59.473 40.000 0.00 0.00 0.00 2.85
6239 10610 5.525378 GCTGTTGACAAGAAGAAGAAGAAGA 59.475 40.000 2.63 0.00 0.00 2.87
6240 10611 6.037610 GCTGTTGACAAGAAGAAGAAGAAGAA 59.962 38.462 2.63 0.00 0.00 2.52
6241 10612 7.545362 TGTTGACAAGAAGAAGAAGAAGAAG 57.455 36.000 0.00 0.00 0.00 2.85
6242 10613 7.331026 TGTTGACAAGAAGAAGAAGAAGAAGA 58.669 34.615 0.00 0.00 0.00 2.87
6243 10614 7.824289 TGTTGACAAGAAGAAGAAGAAGAAGAA 59.176 33.333 0.00 0.00 0.00 2.52
6244 10615 8.334632 GTTGACAAGAAGAAGAAGAAGAAGAAG 58.665 37.037 0.00 0.00 0.00 2.85
6245 10616 7.786030 TGACAAGAAGAAGAAGAAGAAGAAGA 58.214 34.615 0.00 0.00 0.00 2.87
6246 10617 8.260818 TGACAAGAAGAAGAAGAAGAAGAAGAA 58.739 33.333 0.00 0.00 0.00 2.52
6247 10618 8.661352 ACAAGAAGAAGAAGAAGAAGAAGAAG 57.339 34.615 0.00 0.00 0.00 2.85
6248 10619 8.482128 ACAAGAAGAAGAAGAAGAAGAAGAAGA 58.518 33.333 0.00 0.00 0.00 2.87
6249 10620 9.323985 CAAGAAGAAGAAGAAGAAGAAGAAGAA 57.676 33.333 0.00 0.00 0.00 2.52
6250 10621 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
6251 10622 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
6252 10623 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
6253 10624 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
6254 10625 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
6255 10626 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
6256 10627 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
6257 10628 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
6258 10629 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
6259 10630 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
6260 10631 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
6261 10632 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
6262 10633 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
6263 10634 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
6264 10635 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
6265 10636 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
6266 10637 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
6267 10638 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
6268 10639 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
6269 10640 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
6270 10641 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
6292 10663 6.428159 AGAAGAAGTCGAGTTATTTGCATTGT 59.572 34.615 13.70 0.00 0.00 2.71
6313 10686 9.655769 CATTGTGCATCTATCTGTAATTTACAC 57.344 33.333 5.14 0.00 34.46 2.90
6346 10719 1.614317 CCCTCTGGGTCGATGCTTTTT 60.614 52.381 0.00 0.00 38.25 1.94
6347 10720 1.740025 CCTCTGGGTCGATGCTTTTTC 59.260 52.381 0.00 0.00 0.00 2.29
6348 10721 2.616510 CCTCTGGGTCGATGCTTTTTCT 60.617 50.000 0.00 0.00 0.00 2.52
6349 10722 2.417933 CTCTGGGTCGATGCTTTTTCTG 59.582 50.000 0.00 0.00 0.00 3.02
6351 10724 1.202879 TGGGTCGATGCTTTTTCTGGT 60.203 47.619 0.00 0.00 0.00 4.00
6353 10726 2.418976 GGGTCGATGCTTTTTCTGGTAC 59.581 50.000 0.00 0.00 0.00 3.34
6355 10728 2.093783 GTCGATGCTTTTTCTGGTACGG 59.906 50.000 0.00 0.00 0.00 4.02
6356 10729 1.396996 CGATGCTTTTTCTGGTACGGG 59.603 52.381 0.00 0.00 33.92 5.28
6357 10730 1.743394 GATGCTTTTTCTGGTACGGGG 59.257 52.381 0.00 0.00 33.92 5.73
6358 10731 0.250989 TGCTTTTTCTGGTACGGGGG 60.251 55.000 0.00 0.00 33.92 5.40
6360 10733 1.302671 TTTTTCTGGTACGGGGGCG 60.303 57.895 0.00 0.00 33.92 6.13
6361 10734 2.054473 TTTTTCTGGTACGGGGGCGT 62.054 55.000 0.00 0.00 33.92 5.68
6362 10735 2.734948 TTTTCTGGTACGGGGGCGTG 62.735 60.000 0.00 0.00 33.92 5.34
6366 10739 2.839162 GGTACGGGGGCGTGGATA 60.839 66.667 0.00 0.00 0.00 2.59
6367 10740 2.418777 GTACGGGGGCGTGGATAC 59.581 66.667 0.00 0.00 0.00 2.24
6368 10741 2.839162 TACGGGGGCGTGGATACC 60.839 66.667 0.00 0.00 0.00 2.73
6369 10742 3.378472 TACGGGGGCGTGGATACCT 62.378 63.158 0.00 0.00 0.00 3.08
6370 10743 3.925090 CGGGGGCGTGGATACCTC 61.925 72.222 0.00 0.00 0.00 3.85
6371 10744 3.557290 GGGGGCGTGGATACCTCC 61.557 72.222 0.00 0.00 40.13 4.30
6372 10745 3.925090 GGGGCGTGGATACCTCCG 61.925 72.222 0.00 0.00 45.37 4.63
6373 10746 3.925090 GGGCGTGGATACCTCCGG 61.925 72.222 0.00 0.00 45.37 5.14
6374 10747 3.925090 GGCGTGGATACCTCCGGG 61.925 72.222 0.00 0.00 45.37 5.73
6375 10748 4.603946 GCGTGGATACCTCCGGGC 62.604 72.222 0.00 0.00 45.37 6.13
6376 10749 3.151710 CGTGGATACCTCCGGGCA 61.152 66.667 0.00 0.00 45.37 5.36
6505 10878 7.285401 AGGAATTAGCAAGTACAATAACCATGG 59.715 37.037 11.19 11.19 0.00 3.66
6511 10884 5.296035 GCAAGTACAATAACCATGGAGTACC 59.704 44.000 21.47 6.89 34.03 3.34
6560 10933 6.989759 TGCACTAAGTATACAGAGAGAGAGAG 59.010 42.308 5.50 0.00 0.00 3.20
6561 10934 7.147637 TGCACTAAGTATACAGAGAGAGAGAGA 60.148 40.741 5.50 0.00 0.00 3.10
6562 10935 7.385205 GCACTAAGTATACAGAGAGAGAGAGAG 59.615 44.444 5.50 0.00 0.00 3.20
6563 10936 8.638873 CACTAAGTATACAGAGAGAGAGAGAGA 58.361 40.741 5.50 0.00 0.00 3.10
6564 10937 8.861086 ACTAAGTATACAGAGAGAGAGAGAGAG 58.139 40.741 5.50 0.00 0.00 3.20
6565 10938 7.914427 AAGTATACAGAGAGAGAGAGAGAGA 57.086 40.000 5.50 0.00 0.00 3.10
6566 10939 7.531857 AGTATACAGAGAGAGAGAGAGAGAG 57.468 44.000 5.50 0.00 0.00 3.20
6567 10940 7.298374 AGTATACAGAGAGAGAGAGAGAGAGA 58.702 42.308 5.50 0.00 0.00 3.10
6568 10941 6.662865 ATACAGAGAGAGAGAGAGAGAGAG 57.337 45.833 0.00 0.00 0.00 3.20
6569 10942 4.614475 ACAGAGAGAGAGAGAGAGAGAGA 58.386 47.826 0.00 0.00 0.00 3.10
6570 10943 4.648762 ACAGAGAGAGAGAGAGAGAGAGAG 59.351 50.000 0.00 0.00 0.00 3.20
6571 10944 4.892345 CAGAGAGAGAGAGAGAGAGAGAGA 59.108 50.000 0.00 0.00 0.00 3.10
6572 10945 5.009911 CAGAGAGAGAGAGAGAGAGAGAGAG 59.990 52.000 0.00 0.00 0.00 3.20
6573 10946 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
6574 10947 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
6575 10948 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
6576 10949 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
6577 10950 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
6578 10951 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
6579 10952 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
6580 10953 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
6581 10954 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
6582 10955 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
6583 10956 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
6584 10957 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
6585 10958 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
6586 10959 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
6587 10960 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
6588 10961 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
6589 10962 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
6590 10963 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
6591 10964 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
6592 10965 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
6593 10966 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
6594 10967 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
6595 10968 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
6604 10977 2.159043 AGAGAGAGAGAGAGAGACGCAG 60.159 54.545 0.00 0.00 0.00 5.18
6754 11162 0.343018 TGAGATGGGAGGGTGGATGA 59.657 55.000 0.00 0.00 0.00 2.92
6755 11163 1.055040 GAGATGGGAGGGTGGATGAG 58.945 60.000 0.00 0.00 0.00 2.90
6815 11223 3.691118 GCTCACAATGCTTTGGAGATGTA 59.309 43.478 23.13 4.87 37.15 2.29
6952 11360 8.408601 AGATGATGCAAATGTAGATGTAAAACC 58.591 33.333 0.00 0.00 0.00 3.27
7035 11443 4.314440 GCAGGAGGTGTGCCGACA 62.314 66.667 0.00 0.00 40.50 4.35
7061 11469 1.748122 GACGAGAGCCGGTAGGTCA 60.748 63.158 1.90 0.00 45.87 4.02
7072 11480 1.095807 GGTAGGTCAAATGCGGAGGC 61.096 60.000 0.00 0.00 40.52 4.70
7073 11481 1.153449 TAGGTCAAATGCGGAGGCG 60.153 57.895 0.00 0.00 44.10 5.52
7074 11482 2.587322 TAGGTCAAATGCGGAGGCGG 62.587 60.000 0.00 0.00 44.10 6.13
7075 11483 3.508840 GTCAAATGCGGAGGCGGG 61.509 66.667 0.00 0.00 44.10 6.13
7076 11484 3.711814 TCAAATGCGGAGGCGGGA 61.712 61.111 0.00 0.00 44.10 5.14
7077 11485 3.204827 CAAATGCGGAGGCGGGAG 61.205 66.667 0.00 0.00 44.10 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 5.343249 GTTTTTCAGAAATCAGCACACAGT 58.657 37.500 0.00 0.00 0.00 3.55
48 49 1.069765 CACTGGTGTCTGCGAGGTT 59.930 57.895 0.00 0.00 0.00 3.50
219 220 7.438160 CAGAGATAATTACGGCATCAGTAACAA 59.562 37.037 0.00 0.00 36.96 2.83
246 247 5.936372 CCATGTCCACATATTCACCTAGATG 59.064 44.000 0.00 0.00 34.26 2.90
551 562 6.257849 TGTTCCAGTTTGCTTCATATATCGTC 59.742 38.462 0.00 0.00 0.00 4.20
633 645 2.878406 ACGATCAAAACTGTCAACCCAG 59.122 45.455 0.00 0.00 38.45 4.45
749 766 5.482006 GCAACTCTTCATTAATTGGCCTTT 58.518 37.500 3.32 0.00 0.00 3.11
760 777 1.601903 TGAAACGCGCAACTCTTCATT 59.398 42.857 5.73 0.00 0.00 2.57
805 844 4.381718 GCAGAACAAGGGACGATACTAGTT 60.382 45.833 0.00 0.00 0.00 2.24
809 848 1.899814 TGCAGAACAAGGGACGATACT 59.100 47.619 0.00 0.00 0.00 2.12
810 849 2.000447 GTGCAGAACAAGGGACGATAC 59.000 52.381 0.00 0.00 0.00 2.24
834 873 8.872845 GCCAAAGACTTCATTATTTTACAATGG 58.127 33.333 0.00 0.00 34.73 3.16
849 888 1.674651 GACCCCGGCCAAAGACTTC 60.675 63.158 2.24 0.00 0.00 3.01
862 905 1.292541 GACTCACTCCAACGACCCC 59.707 63.158 0.00 0.00 0.00 4.95
863 906 1.080705 CGACTCACTCCAACGACCC 60.081 63.158 0.00 0.00 0.00 4.46
875 918 4.560108 GCTACTCAAACCTAAACCGACTCA 60.560 45.833 0.00 0.00 0.00 3.41
921 964 1.335872 CCCACTGTCAAACAATTCCGC 60.336 52.381 0.00 0.00 0.00 5.54
928 971 5.629133 GCTTATATCCTCCCACTGTCAAACA 60.629 44.000 0.00 0.00 0.00 2.83
944 987 3.681874 GCCAACTATCCCGGGCTTATATC 60.682 52.174 18.49 0.00 43.09 1.63
970 1013 1.999071 CTCAAGTCGAGGAGCGGAGG 61.999 65.000 0.00 0.00 41.33 4.30
975 1018 2.425312 TCAATCTCTCAAGTCGAGGAGC 59.575 50.000 4.27 0.00 42.55 4.70
1012 1057 2.187424 CCTCTGCTGCTGCTCCTC 59.813 66.667 17.00 0.00 40.48 3.71
1013 1058 3.400928 CCCTCTGCTGCTGCTCCT 61.401 66.667 17.00 0.00 40.48 3.69
1014 1059 3.388703 CTCCCTCTGCTGCTGCTCC 62.389 68.421 17.00 0.00 40.48 4.70
1116 1161 1.174078 TGAAGTCGTAGGGCGTCACA 61.174 55.000 1.45 0.00 42.13 3.58
1155 1200 2.524300 GTCAAAGGCGACGTAAGCA 58.476 52.632 15.90 0.00 45.62 3.91
1201 1246 3.186909 CAGATATTCGAAACGCACAGGA 58.813 45.455 0.00 0.00 0.00 3.86
1206 1251 5.445407 GCTGTTAACAGATATTCGAAACGCA 60.445 40.000 34.43 0.00 46.59 5.24
1209 1254 6.092259 ACCAGCTGTTAACAGATATTCGAAAC 59.908 38.462 34.43 15.21 46.59 2.78
1213 1258 5.220662 CCAACCAGCTGTTAACAGATATTCG 60.221 44.000 34.43 18.45 46.59 3.34
1215 1260 5.815581 TCCAACCAGCTGTTAACAGATATT 58.184 37.500 34.43 23.35 46.59 1.28
1216 1261 5.189736 TCTCCAACCAGCTGTTAACAGATAT 59.810 40.000 34.43 19.38 46.59 1.63
1217 1262 4.530553 TCTCCAACCAGCTGTTAACAGATA 59.469 41.667 34.43 14.49 46.59 1.98
1218 1263 3.327757 TCTCCAACCAGCTGTTAACAGAT 59.672 43.478 34.43 27.94 46.59 2.90
1220 1265 2.808543 GTCTCCAACCAGCTGTTAACAG 59.191 50.000 27.85 27.85 46.40 3.16
1221 1266 2.846193 GTCTCCAACCAGCTGTTAACA 58.154 47.619 13.81 8.28 34.69 2.41
1246 1291 5.075448 CGAAATTTCAGCCAATCGATATCG 58.925 41.667 19.14 19.14 41.45 2.92
1247 1292 4.848299 GCGAAATTTCAGCCAATCGATATC 59.152 41.667 17.99 0.00 32.38 1.63
1248 1293 4.320494 GGCGAAATTTCAGCCAATCGATAT 60.320 41.667 31.36 0.00 42.40 1.63
1249 1294 3.003275 GGCGAAATTTCAGCCAATCGATA 59.997 43.478 31.36 0.00 42.40 2.92
1250 1295 2.223572 GGCGAAATTTCAGCCAATCGAT 60.224 45.455 31.36 0.00 42.40 3.59
1258 1303 0.179163 CCTTCCGGCGAAATTTCAGC 60.179 55.000 17.99 19.08 0.00 4.26
1272 1317 2.362736 GGTTTTGACCGTATCCCTTCC 58.637 52.381 0.00 0.00 0.00 3.46
1275 1320 0.251073 CGGGTTTTGACCGTATCCCT 59.749 55.000 0.00 0.00 46.03 4.20
1311 1357 1.946768 CGACACCTGCCTTCTCAAAAA 59.053 47.619 0.00 0.00 0.00 1.94
1312 1358 1.593196 CGACACCTGCCTTCTCAAAA 58.407 50.000 0.00 0.00 0.00 2.44
1313 1359 0.884704 GCGACACCTGCCTTCTCAAA 60.885 55.000 0.00 0.00 0.00 2.69
1315 1361 2.343758 GCGACACCTGCCTTCTCA 59.656 61.111 0.00 0.00 0.00 3.27
1316 1362 2.029844 GTGCGACACCTGCCTTCTC 61.030 63.158 0.00 0.00 0.00 2.87
1317 1363 2.031163 GTGCGACACCTGCCTTCT 59.969 61.111 0.00 0.00 0.00 2.85
1318 1364 2.280797 TGTGCGACACCTGCCTTC 60.281 61.111 7.38 0.00 32.73 3.46
1319 1365 2.281070 CTGTGCGACACCTGCCTT 60.281 61.111 7.38 0.00 32.73 4.35
1320 1366 4.320456 CCTGTGCGACACCTGCCT 62.320 66.667 7.38 0.00 32.73 4.75
1361 1407 1.184970 AAGGAAAACGGCCACATGGG 61.185 55.000 2.24 0.00 40.85 4.00
1362 1408 0.678950 AAAGGAAAACGGCCACATGG 59.321 50.000 2.24 0.00 38.53 3.66
1363 1409 2.524569 AAAAGGAAAACGGCCACATG 57.475 45.000 2.24 0.00 0.00 3.21
1399 1446 7.014808 ACAAATGGAGAGAAAAATACCCGAAAA 59.985 33.333 0.00 0.00 0.00 2.29
1404 1451 7.227049 TCAACAAATGGAGAGAAAAATACCC 57.773 36.000 0.00 0.00 0.00 3.69
1423 1470 9.445786 GACGAAACAGAAAAAGAATAATCAACA 57.554 29.630 0.00 0.00 0.00 3.33
1424 1471 9.665264 AGACGAAACAGAAAAAGAATAATCAAC 57.335 29.630 0.00 0.00 0.00 3.18
1426 1473 9.273016 AGAGACGAAACAGAAAAAGAATAATCA 57.727 29.630 0.00 0.00 0.00 2.57
1429 1476 9.326413 AGAAGAGACGAAACAGAAAAAGAATAA 57.674 29.630 0.00 0.00 0.00 1.40
1430 1477 8.888579 AGAAGAGACGAAACAGAAAAAGAATA 57.111 30.769 0.00 0.00 0.00 1.75
1431 1478 7.713073 AGAGAAGAGACGAAACAGAAAAAGAAT 59.287 33.333 0.00 0.00 0.00 2.40
1433 1480 6.574350 AGAGAAGAGACGAAACAGAAAAAGA 58.426 36.000 0.00 0.00 0.00 2.52
1454 1569 2.030805 CCCGCTTGAAAAACCTGAAGAG 60.031 50.000 0.00 0.00 0.00 2.85
1504 1619 8.182881 TGAATTTGGAATTTGAAAACAGCAAAG 58.817 29.630 0.00 0.00 38.48 2.77
1603 2698 8.556517 TCACGAATCTAGTATCAAATAACACG 57.443 34.615 0.00 0.00 0.00 4.49
1665 2827 1.596954 CGAGGGCAAAGTCACGTTTTG 60.597 52.381 6.80 6.80 38.30 2.44
1666 2828 0.661020 CGAGGGCAAAGTCACGTTTT 59.339 50.000 0.00 0.00 0.00 2.43
1667 2829 0.463116 ACGAGGGCAAAGTCACGTTT 60.463 50.000 0.00 0.00 0.00 3.60
1668 2830 0.878961 GACGAGGGCAAAGTCACGTT 60.879 55.000 0.00 0.00 35.19 3.99
1670 2832 2.027625 GGACGAGGGCAAAGTCACG 61.028 63.158 0.00 0.00 36.68 4.35
1671 2833 1.671379 GGGACGAGGGCAAAGTCAC 60.671 63.158 0.00 0.80 36.68 3.67
1672 2834 2.747686 GGGACGAGGGCAAAGTCA 59.252 61.111 0.00 0.00 36.68 3.41
1722 2884 0.611714 GAAAACCCTAGACTCCGCCA 59.388 55.000 0.00 0.00 0.00 5.69
1848 3015 1.186200 TCTGATGGTCTCCGTGAAGG 58.814 55.000 0.00 0.00 42.97 3.46
1859 3030 2.446848 CCGCCCTGGATCTGATGGT 61.447 63.158 0.00 0.00 42.00 3.55
2025 3211 2.050144 ACCGATATGCTCCACCAGAAT 58.950 47.619 0.00 0.00 0.00 2.40
2051 3237 0.469892 CAAGGTGGCCAAGGTTTCCT 60.470 55.000 7.24 5.57 33.87 3.36
2095 3282 2.049526 GGAAACCGGCGCCAAAAG 60.050 61.111 28.98 14.27 0.00 2.27
2107 3294 2.361230 CGCCCCCAAGGAGGAAAC 60.361 66.667 0.00 0.00 41.22 2.78
2221 3410 4.021925 GCGCCACCTCCAGGAAGT 62.022 66.667 0.00 0.00 38.94 3.01
2261 3451 2.664081 CCCTCACCTGCAGACCCTC 61.664 68.421 17.39 0.00 0.00 4.30
2339 3964 2.046023 CCATGCCGCCAAGAGTCA 60.046 61.111 0.00 0.00 0.00 3.41
2394 4019 2.827190 ATCGACCTCCTGCGCGTA 60.827 61.111 8.43 0.71 0.00 4.42
2411 4036 4.662961 CCACGACGCCAGACAGCA 62.663 66.667 0.00 0.00 0.00 4.41
2452 4077 2.282391 TGTTGCATCGGCCTTGCT 60.282 55.556 23.16 0.00 40.77 3.91
2696 4321 1.067295 AGACCAAAGCCACCATCTCA 58.933 50.000 0.00 0.00 0.00 3.27
2697 4322 2.206576 AAGACCAAAGCCACCATCTC 57.793 50.000 0.00 0.00 0.00 2.75
2822 4449 8.196771 GGCTTATGTTATCAATCCAAACATTGA 58.803 33.333 5.36 0.00 44.90 2.57
2824 4451 8.310122 AGGCTTATGTTATCAATCCAAACATT 57.690 30.769 5.36 0.00 42.31 2.71
2876 4515 3.191162 TGCTACTTGGATTCAACACATGC 59.809 43.478 0.00 0.00 0.00 4.06
2990 4629 5.721960 ACTAAGTAGTTGATCCCACTGACAT 59.278 40.000 5.15 0.00 31.13 3.06
3043 4682 3.712187 ACCAAAACAAAAGGCATGTACG 58.288 40.909 0.00 0.00 0.00 3.67
3091 4730 7.549615 AACAGAGCGTAAAAATATAACCCTC 57.450 36.000 0.00 0.00 0.00 4.30
3104 4743 6.537301 TCAGAAAGAAAGAAAACAGAGCGTAA 59.463 34.615 0.00 0.00 0.00 3.18
3108 4747 6.555315 TGTTCAGAAAGAAAGAAAACAGAGC 58.445 36.000 0.00 0.00 38.13 4.09
3112 4751 7.489113 GCATCTTGTTCAGAAAGAAAGAAAACA 59.511 33.333 7.81 0.00 38.13 2.83
3126 4765 3.935203 AGATAACACCGCATCTTGTTCAG 59.065 43.478 0.00 0.00 37.19 3.02
3164 4803 4.019792 TGGAAGTTTAGAGCAAGCATCA 57.980 40.909 0.00 0.00 0.00 3.07
3168 4807 5.573337 ATCATTGGAAGTTTAGAGCAAGC 57.427 39.130 0.00 0.00 0.00 4.01
3184 4823 5.225129 GCGTTGTTAAAAGAGCGTATCATTG 59.775 40.000 0.00 0.00 0.00 2.82
3487 5548 6.127196 ACAGGAATTCCTAGAGAACAAGCTAG 60.127 42.308 26.61 11.36 46.65 3.42
3516 5643 5.316167 TCAGTTTCCACTTGAGTGCATAAT 58.684 37.500 5.62 0.00 44.34 1.28
3583 6101 9.915629 GGACGATAAACAGAAGATAGAATATGT 57.084 33.333 0.00 0.00 0.00 2.29
3695 6214 9.996554 TTTCAGAACATAGTTCAGACATAGAAA 57.003 29.630 11.92 7.35 0.00 2.52
3702 6221 6.486253 TGCATTTCAGAACATAGTTCAGAC 57.514 37.500 11.92 0.00 0.00 3.51
3706 6225 6.690194 AGGATGCATTTCAGAACATAGTTC 57.310 37.500 0.00 1.77 0.00 3.01
3713 6232 6.150140 ACTTTCAGTAGGATGCATTTCAGAAC 59.850 38.462 0.00 0.00 0.00 3.01
3760 6279 3.183793 TGACTATCTCGTGCATTGCAT 57.816 42.857 15.49 0.37 41.91 3.96
3767 6286 5.005203 CAGTTCAGAATTGACTATCTCGTGC 59.995 44.000 0.00 0.00 31.71 5.34
3768 6287 5.005203 GCAGTTCAGAATTGACTATCTCGTG 59.995 44.000 9.78 0.00 31.71 4.35
4106 6639 4.794334 TGGGGAAGTTAAACAAGCAACTA 58.206 39.130 0.00 0.00 33.92 2.24
4186 6719 6.403866 AGTTGTTAATGTCAAGCCAAATGA 57.596 33.333 0.00 0.00 0.00 2.57
4238 6808 4.308526 AGGCTTTCCCTTTTTCCTCTAG 57.691 45.455 0.00 0.00 43.06 2.43
4386 6956 3.066342 CCATAATGCAAAGTCAGCAGGAG 59.934 47.826 0.00 0.00 46.36 3.69
4393 6963 3.193267 GCACCTTCCATAATGCAAAGTCA 59.807 43.478 0.00 0.00 38.00 3.41
4511 7082 2.347490 GCTCACCCTCCTTCGCAA 59.653 61.111 0.00 0.00 0.00 4.85
4515 7086 0.915364 AGAATGGCTCACCCTCCTTC 59.085 55.000 0.00 0.00 33.59 3.46
4835 7416 3.339713 TTTGGGACGGAGGGAGTATAT 57.660 47.619 0.00 0.00 0.00 0.86
4836 7417 2.852714 TTTGGGACGGAGGGAGTATA 57.147 50.000 0.00 0.00 0.00 1.47
4837 7418 1.961133 TTTTGGGACGGAGGGAGTAT 58.039 50.000 0.00 0.00 0.00 2.12
4838 7419 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
4839 7420 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
4840 7421 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
4841 7422 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
4842 7423 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
4843 7424 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
4844 7425 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
4845 7426 3.615592 CGAGACACTTATTTTGGGACGGA 60.616 47.826 0.00 0.00 0.00 4.69
4846 7427 2.671396 CGAGACACTTATTTTGGGACGG 59.329 50.000 0.00 0.00 0.00 4.79
4847 7428 3.367025 GTCGAGACACTTATTTTGGGACG 59.633 47.826 0.00 0.00 0.00 4.79
4848 7429 4.566987 AGTCGAGACACTTATTTTGGGAC 58.433 43.478 5.99 0.00 0.00 4.46
4849 7430 4.884668 AGTCGAGACACTTATTTTGGGA 57.115 40.909 5.99 0.00 0.00 4.37
4850 7431 5.238650 ACAAAGTCGAGACACTTATTTTGGG 59.761 40.000 5.99 0.00 35.45 4.12
4851 7432 6.300354 ACAAAGTCGAGACACTTATTTTGG 57.700 37.500 5.99 0.00 35.45 3.28
4852 7433 8.073355 AGTACAAAGTCGAGACACTTATTTTG 57.927 34.615 5.99 8.46 35.45 2.44
4853 7434 9.754382 TTAGTACAAAGTCGAGACACTTATTTT 57.246 29.630 5.99 0.00 35.45 1.82
4854 7435 9.189723 GTTAGTACAAAGTCGAGACACTTATTT 57.810 33.333 5.99 0.00 35.45 1.40
4855 7436 8.574737 AGTTAGTACAAAGTCGAGACACTTATT 58.425 33.333 5.99 0.00 35.45 1.40
4856 7437 8.108551 AGTTAGTACAAAGTCGAGACACTTAT 57.891 34.615 5.99 0.00 35.45 1.73
4857 7438 7.502120 AGTTAGTACAAAGTCGAGACACTTA 57.498 36.000 5.99 0.00 35.45 2.24
4858 7439 6.388435 AGTTAGTACAAAGTCGAGACACTT 57.612 37.500 5.99 0.00 38.30 3.16
4859 7440 6.388435 AAGTTAGTACAAAGTCGAGACACT 57.612 37.500 5.99 2.70 0.00 3.55
4860 7441 7.859875 ACTAAAGTTAGTACAAAGTCGAGACAC 59.140 37.037 5.99 0.00 41.92 3.67
4861 7442 7.934457 ACTAAAGTTAGTACAAAGTCGAGACA 58.066 34.615 5.99 0.00 41.92 3.41
4886 7467 9.533253 GTGTCTTAACCTTAGTACAACTTTGTA 57.467 33.333 0.00 0.00 42.35 2.41
4887 7468 8.262933 AGTGTCTTAACCTTAGTACAACTTTGT 58.737 33.333 0.00 0.00 44.86 2.83
4888 7469 8.658499 AGTGTCTTAACCTTAGTACAACTTTG 57.342 34.615 0.00 0.00 0.00 2.77
4896 7477 9.729281 CCCAAAATAAGTGTCTTAACCTTAGTA 57.271 33.333 0.00 0.00 0.00 1.82
4897 7478 8.442374 TCCCAAAATAAGTGTCTTAACCTTAGT 58.558 33.333 0.00 0.00 0.00 2.24
4898 7479 8.727910 GTCCCAAAATAAGTGTCTTAACCTTAG 58.272 37.037 0.00 0.00 0.00 2.18
4899 7480 7.388500 CGTCCCAAAATAAGTGTCTTAACCTTA 59.612 37.037 0.00 0.00 0.00 2.69
4900 7481 6.206048 CGTCCCAAAATAAGTGTCTTAACCTT 59.794 38.462 0.00 0.00 0.00 3.50
4901 7482 5.704053 CGTCCCAAAATAAGTGTCTTAACCT 59.296 40.000 0.00 0.00 0.00 3.50
4902 7483 5.702209 TCGTCCCAAAATAAGTGTCTTAACC 59.298 40.000 0.00 0.00 0.00 2.85
4903 7484 6.128363 CCTCGTCCCAAAATAAGTGTCTTAAC 60.128 42.308 0.00 0.00 0.00 2.01
4904 7485 5.935789 CCTCGTCCCAAAATAAGTGTCTTAA 59.064 40.000 0.00 0.00 0.00 1.85
4905 7486 5.246656 TCCTCGTCCCAAAATAAGTGTCTTA 59.753 40.000 0.00 0.00 0.00 2.10
4906 7487 4.041198 TCCTCGTCCCAAAATAAGTGTCTT 59.959 41.667 0.00 0.00 0.00 3.01
4907 7488 3.581332 TCCTCGTCCCAAAATAAGTGTCT 59.419 43.478 0.00 0.00 0.00 3.41
4908 7489 3.933332 CTCCTCGTCCCAAAATAAGTGTC 59.067 47.826 0.00 0.00 0.00 3.67
4909 7490 3.326880 ACTCCTCGTCCCAAAATAAGTGT 59.673 43.478 0.00 0.00 0.00 3.55
4910 7491 3.939066 ACTCCTCGTCCCAAAATAAGTG 58.061 45.455 0.00 0.00 0.00 3.16
4911 7492 5.952347 ATACTCCTCGTCCCAAAATAAGT 57.048 39.130 0.00 0.00 0.00 2.24
4912 7493 7.667557 TGATATACTCCTCGTCCCAAAATAAG 58.332 38.462 0.00 0.00 0.00 1.73
4913 7494 7.606135 TGATATACTCCTCGTCCCAAAATAA 57.394 36.000 0.00 0.00 0.00 1.40
4914 7495 7.792364 ATGATATACTCCTCGTCCCAAAATA 57.208 36.000 0.00 0.00 0.00 1.40
4915 7496 6.688073 ATGATATACTCCTCGTCCCAAAAT 57.312 37.500 0.00 0.00 0.00 1.82
4916 7497 6.494666 AATGATATACTCCTCGTCCCAAAA 57.505 37.500 0.00 0.00 0.00 2.44
4917 7498 6.126883 ACAAATGATATACTCCTCGTCCCAAA 60.127 38.462 0.00 0.00 0.00 3.28
4918 7499 5.365605 ACAAATGATATACTCCTCGTCCCAA 59.634 40.000 0.00 0.00 0.00 4.12
4919 7500 4.899457 ACAAATGATATACTCCTCGTCCCA 59.101 41.667 0.00 0.00 0.00 4.37
4920 7501 5.470047 ACAAATGATATACTCCTCGTCCC 57.530 43.478 0.00 0.00 0.00 4.46
4921 7502 6.761714 ACAAACAAATGATATACTCCTCGTCC 59.238 38.462 0.00 0.00 0.00 4.79
4922 7503 7.772332 ACAAACAAATGATATACTCCTCGTC 57.228 36.000 0.00 0.00 0.00 4.20
4923 7504 7.438459 GCTACAAACAAATGATATACTCCTCGT 59.562 37.037 0.00 0.00 0.00 4.18
4924 7505 7.095607 GGCTACAAACAAATGATATACTCCTCG 60.096 40.741 0.00 0.00 0.00 4.63
4925 7506 7.095607 CGGCTACAAACAAATGATATACTCCTC 60.096 40.741 0.00 0.00 0.00 3.71
4926 7507 6.706270 CGGCTACAAACAAATGATATACTCCT 59.294 38.462 0.00 0.00 0.00 3.69
4927 7508 6.704493 TCGGCTACAAACAAATGATATACTCC 59.296 38.462 0.00 0.00 0.00 3.85
4928 7509 7.095607 CCTCGGCTACAAACAAATGATATACTC 60.096 40.741 0.00 0.00 0.00 2.59
4929 7510 6.706270 CCTCGGCTACAAACAAATGATATACT 59.294 38.462 0.00 0.00 0.00 2.12
4930 7511 6.565999 GCCTCGGCTACAAACAAATGATATAC 60.566 42.308 0.00 0.00 38.26 1.47
4950 7531 2.154462 AGAACAAAATGGTCAGCCTCG 58.846 47.619 0.00 0.00 36.30 4.63
5111 7692 9.039870 CCTGACATTAAGTTTGCAAACATTAAA 57.960 29.630 36.46 25.27 41.30 1.52
5118 7699 5.010922 AGCATCCTGACATTAAGTTTGCAAA 59.989 36.000 8.05 8.05 0.00 3.68
5119 7700 4.523943 AGCATCCTGACATTAAGTTTGCAA 59.476 37.500 0.00 0.00 0.00 4.08
5120 7701 4.081406 AGCATCCTGACATTAAGTTTGCA 58.919 39.130 0.00 0.00 0.00 4.08
5121 7702 4.666237 GAGCATCCTGACATTAAGTTTGC 58.334 43.478 0.00 0.00 0.00 3.68
5156 7737 8.682895 CACGACAGTTCAAATCTATATAACTCG 58.317 37.037 0.00 0.00 0.00 4.18
5347 7931 2.925706 TCAAGGGCGCCTGTGGTA 60.926 61.111 28.56 6.79 32.13 3.25
5350 7934 4.680237 TCGTCAAGGGCGCCTGTG 62.680 66.667 28.56 23.51 32.13 3.66
5435 8019 5.241285 TCAATGCTCATCAACTGCAAAACTA 59.759 36.000 0.00 0.00 40.24 2.24
5453 8037 1.470098 CCCAGTAGCACAGTTCAATGC 59.530 52.381 0.00 0.00 42.39 3.56
5646 8240 6.344500 CAGAGCTTGTACATAATGTTCCTCT 58.656 40.000 0.00 0.00 0.00 3.69
5647 8241 5.525378 CCAGAGCTTGTACATAATGTTCCTC 59.475 44.000 0.00 0.00 0.00 3.71
5684 8536 5.117355 AGACAGTTTATTCGTGACTTCGA 57.883 39.130 0.00 0.00 38.08 3.71
5781 10137 2.814336 CCCAGAAAAGACTAGTGGCAAC 59.186 50.000 0.00 0.00 0.00 4.17
5791 10147 1.346722 TCTTCGACCCCCAGAAAAGAC 59.653 52.381 0.00 0.00 0.00 3.01
5832 10190 7.111247 ACCATTTTTGTTGATTCTCAGAACA 57.889 32.000 0.00 0.00 0.00 3.18
5842 10200 7.920160 ACAAGTTTTGACCATTTTTGTTGAT 57.080 28.000 0.00 0.00 0.00 2.57
5843 10201 7.547370 CCTACAAGTTTTGACCATTTTTGTTGA 59.453 33.333 0.00 0.00 0.00 3.18
5844 10202 7.333174 ACCTACAAGTTTTGACCATTTTTGTTG 59.667 33.333 0.00 0.00 0.00 3.33
5880 10238 2.284258 AGCGCCCTCTCCTTCAGT 60.284 61.111 2.29 0.00 0.00 3.41
5966 10324 1.014564 CGACTCCGCAAACTCCTTCC 61.015 60.000 0.00 0.00 0.00 3.46
6057 10418 3.055530 CAGCTAGTTCTGGTTCAGATGGT 60.056 47.826 0.00 0.00 40.39 3.55
6077 10441 4.238514 GGTATATGCCTACGCTTCTTCAG 58.761 47.826 2.01 0.00 35.36 3.02
6085 10449 2.094338 GGGTACTGGTATATGCCTACGC 60.094 54.545 11.44 10.23 0.00 4.42
6092 10456 8.375506 ACTGAACATAATGGGTACTGGTATATG 58.624 37.037 0.00 0.00 0.00 1.78
6093 10457 8.506196 ACTGAACATAATGGGTACTGGTATAT 57.494 34.615 0.00 0.00 0.00 0.86
6094 10458 7.924358 ACTGAACATAATGGGTACTGGTATA 57.076 36.000 0.00 0.00 0.00 1.47
6095 10459 6.824958 ACTGAACATAATGGGTACTGGTAT 57.175 37.500 0.00 0.00 0.00 2.73
6096 10460 6.013206 ACAACTGAACATAATGGGTACTGGTA 60.013 38.462 0.00 0.00 0.00 3.25
6097 10461 5.222048 ACAACTGAACATAATGGGTACTGGT 60.222 40.000 0.00 0.00 0.00 4.00
6098 10462 5.253330 ACAACTGAACATAATGGGTACTGG 58.747 41.667 0.00 0.00 0.00 4.00
6099 10463 6.429692 TGAACAACTGAACATAATGGGTACTG 59.570 38.462 0.00 0.00 0.00 2.74
6100 10464 6.430000 GTGAACAACTGAACATAATGGGTACT 59.570 38.462 0.00 0.00 0.00 2.73
6101 10465 6.608610 GTGAACAACTGAACATAATGGGTAC 58.391 40.000 0.00 0.00 0.00 3.34
6102 10466 5.410132 CGTGAACAACTGAACATAATGGGTA 59.590 40.000 0.00 0.00 0.00 3.69
6104 10468 4.215399 ACGTGAACAACTGAACATAATGGG 59.785 41.667 0.00 0.00 0.00 4.00
6105 10469 5.356882 ACGTGAACAACTGAACATAATGG 57.643 39.130 0.00 0.00 0.00 3.16
6106 10470 6.147164 ACCTACGTGAACAACTGAACATAATG 59.853 38.462 0.00 0.00 0.00 1.90
6108 10472 5.603596 ACCTACGTGAACAACTGAACATAA 58.396 37.500 0.00 0.00 0.00 1.90
6109 10473 5.204409 ACCTACGTGAACAACTGAACATA 57.796 39.130 0.00 0.00 0.00 2.29
6110 10474 4.067972 ACCTACGTGAACAACTGAACAT 57.932 40.909 0.00 0.00 0.00 2.71
6111 10475 3.530265 ACCTACGTGAACAACTGAACA 57.470 42.857 0.00 0.00 0.00 3.18
6113 10477 5.518848 TTCTACCTACGTGAACAACTGAA 57.481 39.130 0.00 0.00 0.00 3.02
6114 10478 5.242171 TCATTCTACCTACGTGAACAACTGA 59.758 40.000 0.00 0.00 0.00 3.41
6115 10479 5.466819 TCATTCTACCTACGTGAACAACTG 58.533 41.667 0.00 0.00 0.00 3.16
6116 10480 5.717078 TCATTCTACCTACGTGAACAACT 57.283 39.130 0.00 0.00 0.00 3.16
6117 10481 5.347907 CCTTCATTCTACCTACGTGAACAAC 59.652 44.000 0.00 0.00 0.00 3.32
6152 10517 2.126914 TTTGTAAACACATGGCACGC 57.873 45.000 0.00 0.00 0.00 5.34
6154 10519 4.621034 GCTGTATTTGTAAACACATGGCAC 59.379 41.667 0.00 0.00 0.00 5.01
6157 10522 6.012658 ACAGCTGTATTTGTAAACACATGG 57.987 37.500 20.16 0.00 0.00 3.66
6158 10523 8.028540 TCTACAGCTGTATTTGTAAACACATG 57.971 34.615 26.22 9.92 30.06 3.21
6159 10524 8.615878 TTCTACAGCTGTATTTGTAAACACAT 57.384 30.769 26.22 0.00 30.06 3.21
6175 10546 5.663106 TGGGTTATTCTCTCATTCTACAGCT 59.337 40.000 0.00 0.00 0.00 4.24
6177 10548 8.206867 TCAATGGGTTATTCTCTCATTCTACAG 58.793 37.037 0.00 0.00 0.00 2.74
6192 10563 9.458727 CAGCTGAGAATATAATCAATGGGTTAT 57.541 33.333 8.42 0.00 0.00 1.89
6195 10566 6.845908 ACAGCTGAGAATATAATCAATGGGT 58.154 36.000 23.35 0.00 0.00 4.51
6196 10567 7.446319 TCAACAGCTGAGAATATAATCAATGGG 59.554 37.037 23.35 0.00 0.00 4.00
6199 10570 8.969260 TGTCAACAGCTGAGAATATAATCAAT 57.031 30.769 23.35 0.00 33.60 2.57
6200 10571 8.791327 TTGTCAACAGCTGAGAATATAATCAA 57.209 30.769 23.35 12.40 32.60 2.57
6202 10573 8.654230 TCTTGTCAACAGCTGAGAATATAATC 57.346 34.615 23.35 4.83 36.76 1.75
6203 10574 9.107177 CTTCTTGTCAACAGCTGAGAATATAAT 57.893 33.333 23.35 0.00 36.76 1.28
6204 10575 8.314021 TCTTCTTGTCAACAGCTGAGAATATAA 58.686 33.333 23.35 9.49 36.76 0.98
6206 10577 6.705302 TCTTCTTGTCAACAGCTGAGAATAT 58.295 36.000 23.35 0.00 36.76 1.28
6207 10578 6.101650 TCTTCTTGTCAACAGCTGAGAATA 57.898 37.500 23.35 7.59 36.76 1.75
6208 10579 4.965814 TCTTCTTGTCAACAGCTGAGAAT 58.034 39.130 23.35 0.00 36.76 2.40
6231 10602 8.923270 TCTTCTTCTTCTTCTTCTTCTTCTTCT 58.077 33.333 0.00 0.00 0.00 2.85
6232 10603 9.541143 TTCTTCTTCTTCTTCTTCTTCTTCTTC 57.459 33.333 0.00 0.00 0.00 2.87
6233 10604 9.546428 CTTCTTCTTCTTCTTCTTCTTCTTCTT 57.454 33.333 0.00 0.00 0.00 2.52
6234 10605 8.923270 TCTTCTTCTTCTTCTTCTTCTTCTTCT 58.077 33.333 0.00 0.00 0.00 2.85
6235 10606 9.541143 TTCTTCTTCTTCTTCTTCTTCTTCTTC 57.459 33.333 0.00 0.00 0.00 2.87
6236 10607 9.546428 CTTCTTCTTCTTCTTCTTCTTCTTCTT 57.454 33.333 0.00 0.00 0.00 2.52
6237 10608 8.923270 TCTTCTTCTTCTTCTTCTTCTTCTTCT 58.077 33.333 0.00 0.00 0.00 2.85
6238 10609 9.541143 TTCTTCTTCTTCTTCTTCTTCTTCTTC 57.459 33.333 0.00 0.00 0.00 2.87
6239 10610 9.546428 CTTCTTCTTCTTCTTCTTCTTCTTCTT 57.454 33.333 0.00 0.00 0.00 2.52
6240 10611 8.923270 TCTTCTTCTTCTTCTTCTTCTTCTTCT 58.077 33.333 0.00 0.00 0.00 2.85
6241 10612 9.541143 TTCTTCTTCTTCTTCTTCTTCTTCTTC 57.459 33.333 0.00 0.00 0.00 2.87
6242 10613 9.546428 CTTCTTCTTCTTCTTCTTCTTCTTCTT 57.454 33.333 0.00 0.00 0.00 2.52
6243 10614 8.923270 TCTTCTTCTTCTTCTTCTTCTTCTTCT 58.077 33.333 0.00 0.00 0.00 2.85
6244 10615 9.541143 TTCTTCTTCTTCTTCTTCTTCTTCTTC 57.459 33.333 0.00 0.00 0.00 2.87
6245 10616 9.546428 CTTCTTCTTCTTCTTCTTCTTCTTCTT 57.454 33.333 0.00 0.00 0.00 2.52
6246 10617 8.923270 TCTTCTTCTTCTTCTTCTTCTTCTTCT 58.077 33.333 0.00 0.00 0.00 2.85
6247 10618 9.541143 TTCTTCTTCTTCTTCTTCTTCTTCTTC 57.459 33.333 0.00 0.00 0.00 2.87
6248 10619 9.546428 CTTCTTCTTCTTCTTCTTCTTCTTCTT 57.454 33.333 0.00 0.00 0.00 2.52
6249 10620 8.704668 ACTTCTTCTTCTTCTTCTTCTTCTTCT 58.295 33.333 0.00 0.00 0.00 2.85
6250 10621 8.887036 ACTTCTTCTTCTTCTTCTTCTTCTTC 57.113 34.615 0.00 0.00 0.00 2.87
6251 10622 7.651704 CGACTTCTTCTTCTTCTTCTTCTTCTT 59.348 37.037 0.00 0.00 0.00 2.52
6252 10623 7.013846 TCGACTTCTTCTTCTTCTTCTTCTTCT 59.986 37.037 0.00 0.00 0.00 2.85
6253 10624 7.142680 TCGACTTCTTCTTCTTCTTCTTCTTC 58.857 38.462 0.00 0.00 0.00 2.87
6254 10625 7.045126 TCGACTTCTTCTTCTTCTTCTTCTT 57.955 36.000 0.00 0.00 0.00 2.52
6255 10626 6.264518 ACTCGACTTCTTCTTCTTCTTCTTCT 59.735 38.462 0.00 0.00 0.00 2.85
6256 10627 6.443792 ACTCGACTTCTTCTTCTTCTTCTTC 58.556 40.000 0.00 0.00 0.00 2.87
6257 10628 6.399639 ACTCGACTTCTTCTTCTTCTTCTT 57.600 37.500 0.00 0.00 0.00 2.52
6258 10629 6.399639 AACTCGACTTCTTCTTCTTCTTCT 57.600 37.500 0.00 0.00 0.00 2.85
6259 10630 8.751302 AATAACTCGACTTCTTCTTCTTCTTC 57.249 34.615 0.00 0.00 0.00 2.87
6260 10631 8.983724 CAAATAACTCGACTTCTTCTTCTTCTT 58.016 33.333 0.00 0.00 0.00 2.52
6261 10632 7.117092 GCAAATAACTCGACTTCTTCTTCTTCT 59.883 37.037 0.00 0.00 0.00 2.85
6262 10633 7.095607 TGCAAATAACTCGACTTCTTCTTCTTC 60.096 37.037 0.00 0.00 0.00 2.87
6263 10634 6.706270 TGCAAATAACTCGACTTCTTCTTCTT 59.294 34.615 0.00 0.00 0.00 2.52
6264 10635 6.223852 TGCAAATAACTCGACTTCTTCTTCT 58.776 36.000 0.00 0.00 0.00 2.85
6265 10636 6.467723 TGCAAATAACTCGACTTCTTCTTC 57.532 37.500 0.00 0.00 0.00 2.87
6266 10637 7.041098 ACAATGCAAATAACTCGACTTCTTCTT 60.041 33.333 0.00 0.00 0.00 2.52
6267 10638 6.428159 ACAATGCAAATAACTCGACTTCTTCT 59.572 34.615 0.00 0.00 0.00 2.85
6268 10639 6.521133 CACAATGCAAATAACTCGACTTCTTC 59.479 38.462 0.00 0.00 0.00 2.87
6269 10640 6.373779 CACAATGCAAATAACTCGACTTCTT 58.626 36.000 0.00 0.00 0.00 2.52
6270 10641 5.617751 GCACAATGCAAATAACTCGACTTCT 60.618 40.000 0.00 0.00 44.26 2.85
6292 10663 9.098355 GACAAGTGTAAATTACAGATAGATGCA 57.902 33.333 6.03 0.00 39.77 3.96
6303 10676 7.822822 AGGGTATGACTGACAAGTGTAAATTAC 59.177 37.037 0.00 0.00 36.52 1.89
6313 10686 2.169352 CCCAGAGGGTATGACTGACAAG 59.831 54.545 0.00 0.00 38.25 3.16
6341 10714 1.303091 CGCCCCCGTACCAGAAAAAG 61.303 60.000 0.00 0.00 0.00 2.27
6353 10726 3.925090 GAGGTATCCACGCCCCCG 61.925 72.222 0.00 0.00 41.14 5.73
6372 10745 2.223464 TAACCAAGGATGCCCTGCCC 62.223 60.000 0.00 0.00 43.48 5.36
6373 10746 0.753111 CTAACCAAGGATGCCCTGCC 60.753 60.000 0.00 0.00 43.48 4.85
6374 10747 1.387295 GCTAACCAAGGATGCCCTGC 61.387 60.000 0.00 0.00 43.48 4.85
6375 10748 0.257039 AGCTAACCAAGGATGCCCTG 59.743 55.000 0.00 0.00 43.48 4.45
6384 10757 1.529826 GCAATTCGCGAGCTAACCAAG 60.530 52.381 9.59 0.00 0.00 3.61
6478 10851 8.686334 CATGGTTATTGTACTTGCTAATTCCTT 58.314 33.333 0.00 0.00 0.00 3.36
6479 10852 7.285401 CCATGGTTATTGTACTTGCTAATTCCT 59.715 37.037 2.57 0.00 0.00 3.36
6560 10933 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
6561 10934 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
6562 10935 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
6563 10936 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
6564 10937 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
6565 10938 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
6566 10939 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
6567 10940 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
6568 10941 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
6569 10942 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
6570 10943 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
6571 10944 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
6572 10945 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
6573 10946 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
6574 10947 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
6575 10948 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
6576 10949 5.009610 GTCTCTCTCTCTCTCTCTCTCTCTC 59.990 52.000 0.00 0.00 0.00 3.20
6577 10950 4.892934 GTCTCTCTCTCTCTCTCTCTCTCT 59.107 50.000 0.00 0.00 0.00 3.10
6578 10951 4.261405 CGTCTCTCTCTCTCTCTCTCTCTC 60.261 54.167 0.00 0.00 0.00 3.20
6579 10952 3.634448 CGTCTCTCTCTCTCTCTCTCTCT 59.366 52.174 0.00 0.00 0.00 3.10
6580 10953 3.797184 GCGTCTCTCTCTCTCTCTCTCTC 60.797 56.522 0.00 0.00 0.00 3.20
6581 10954 2.101582 GCGTCTCTCTCTCTCTCTCTCT 59.898 54.545 0.00 0.00 0.00 3.10
6582 10955 2.159099 TGCGTCTCTCTCTCTCTCTCTC 60.159 54.545 0.00 0.00 0.00 3.20
6583 10956 1.831106 TGCGTCTCTCTCTCTCTCTCT 59.169 52.381 0.00 0.00 0.00 3.10
6584 10957 2.205074 CTGCGTCTCTCTCTCTCTCTC 58.795 57.143 0.00 0.00 0.00 3.20
6585 10958 1.134401 CCTGCGTCTCTCTCTCTCTCT 60.134 57.143 0.00 0.00 0.00 3.10
6586 10959 1.299541 CCTGCGTCTCTCTCTCTCTC 58.700 60.000 0.00 0.00 0.00 3.20
6587 10960 0.748005 GCCTGCGTCTCTCTCTCTCT 60.748 60.000 0.00 0.00 0.00 3.10
6588 10961 1.029408 TGCCTGCGTCTCTCTCTCTC 61.029 60.000 0.00 0.00 0.00 3.20
6589 10962 1.001517 TGCCTGCGTCTCTCTCTCT 60.002 57.895 0.00 0.00 0.00 3.10
6590 10963 1.433064 CTGCCTGCGTCTCTCTCTC 59.567 63.158 0.00 0.00 0.00 3.20
6591 10964 2.709883 GCTGCCTGCGTCTCTCTCT 61.710 63.158 0.00 0.00 0.00 3.10
6592 10965 2.202730 GCTGCCTGCGTCTCTCTC 60.203 66.667 0.00 0.00 0.00 3.20
6604 10977 1.811679 GACGTCTTGCCTAGCTGCC 60.812 63.158 8.70 0.00 0.00 4.85
6638 11013 4.389576 GCCTTGTTGCCGTCTGCG 62.390 66.667 0.00 0.00 45.60 5.18
6658 11060 4.240103 CGCCCAGCATCCATCCGA 62.240 66.667 0.00 0.00 0.00 4.55
6685 11087 2.045829 ACACCACACCACACGCAA 60.046 55.556 0.00 0.00 0.00 4.85
6754 11162 3.914551 AAGCGCCCACTCCTCCTCT 62.915 63.158 2.29 0.00 0.00 3.69
6755 11163 2.960688 AAAGCGCCCACTCCTCCTC 61.961 63.158 2.29 0.00 0.00 3.71
6847 11255 9.701355 CTTTTTGAAGATGTAAAACGCATTTTT 57.299 25.926 0.00 0.00 38.91 1.94
6852 11260 6.205784 CCTCTTTTTGAAGATGTAAAACGCA 58.794 36.000 0.00 0.00 0.00 5.24
6853 11261 5.117135 GCCTCTTTTTGAAGATGTAAAACGC 59.883 40.000 0.00 0.00 0.00 4.84
6854 11262 6.205784 TGCCTCTTTTTGAAGATGTAAAACG 58.794 36.000 0.00 0.00 0.00 3.60
6855 11263 7.706607 AGTTGCCTCTTTTTGAAGATGTAAAAC 59.293 33.333 0.00 0.00 0.00 2.43
6856 11264 7.781056 AGTTGCCTCTTTTTGAAGATGTAAAA 58.219 30.769 0.00 0.00 0.00 1.52
6857 11265 7.346751 AGTTGCCTCTTTTTGAAGATGTAAA 57.653 32.000 0.00 0.00 0.00 2.01
6858 11266 6.959639 AGTTGCCTCTTTTTGAAGATGTAA 57.040 33.333 0.00 0.00 0.00 2.41
6859 11267 6.545666 TGAAGTTGCCTCTTTTTGAAGATGTA 59.454 34.615 0.00 0.00 0.00 2.29
6860 11268 5.360714 TGAAGTTGCCTCTTTTTGAAGATGT 59.639 36.000 0.00 0.00 0.00 3.06
6861 11269 5.835257 TGAAGTTGCCTCTTTTTGAAGATG 58.165 37.500 0.00 0.00 0.00 2.90
6862 11270 6.127366 TGTTGAAGTTGCCTCTTTTTGAAGAT 60.127 34.615 0.00 0.00 0.00 2.40
6863 11271 5.184864 TGTTGAAGTTGCCTCTTTTTGAAGA 59.815 36.000 0.00 0.00 0.00 2.87
6864 11272 5.410067 TGTTGAAGTTGCCTCTTTTTGAAG 58.590 37.500 0.00 0.00 0.00 3.02
6865 11273 5.184864 TCTGTTGAAGTTGCCTCTTTTTGAA 59.815 36.000 0.00 0.00 0.00 2.69
6866 11274 4.704540 TCTGTTGAAGTTGCCTCTTTTTGA 59.295 37.500 0.00 0.00 0.00 2.69
6867 11275 4.997565 TCTGTTGAAGTTGCCTCTTTTTG 58.002 39.130 0.00 0.00 0.00 2.44
6868 11276 5.360714 TCATCTGTTGAAGTTGCCTCTTTTT 59.639 36.000 0.00 0.00 0.00 1.94
6869 11277 4.889409 TCATCTGTTGAAGTTGCCTCTTTT 59.111 37.500 0.00 0.00 0.00 2.27
6897 11305 6.072175 GGAGTTGCACTTTTACATCACCAATA 60.072 38.462 0.00 0.00 0.00 1.90
7055 11463 1.153449 CGCCTCCGCATTTGACCTA 60.153 57.895 0.00 0.00 34.03 3.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.