Multiple sequence alignment - TraesCS1A01G133400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G133400 chr1A 100.000 8923 0 0 1 8923 186996992 186988070 0.000000e+00 16478.0
1 TraesCS1A01G133400 chr1A 95.035 282 14 0 1 282 553976433 553976714 2.290000e-120 444.0
2 TraesCS1A01G133400 chr1A 88.737 293 31 2 1 291 553973324 553973032 3.060000e-94 357.0
3 TraesCS1A01G133400 chr1A 90.323 93 7 2 2311 2401 480425569 480425661 4.380000e-23 121.0
4 TraesCS1A01G133400 chr1B 95.306 5859 143 36 2407 8171 228176052 228170232 0.000000e+00 9175.0
5 TraesCS1A01G133400 chr1B 96.916 1589 33 6 286 1858 228178447 228176859 0.000000e+00 2649.0
6 TraesCS1A01G133400 chr1B 95.329 471 22 0 1850 2320 228176519 228176049 0.000000e+00 749.0
7 TraesCS1A01G133400 chr1B 83.813 729 87 21 8203 8923 228170240 228169535 0.000000e+00 664.0
8 TraesCS1A01G133400 chr1B 88.462 286 32 1 1 285 286971160 286970875 2.390000e-90 344.0
9 TraesCS1A01G133400 chr1B 100.000 29 0 0 6572 6600 228171900 228171872 5.000000e-03 54.7
10 TraesCS1A01G133400 chr1D 95.306 3622 93 27 4749 8317 127929801 127926204 0.000000e+00 5675.0
11 TraesCS1A01G133400 chr1D 97.415 2282 43 7 2407 4686 127932644 127930377 0.000000e+00 3873.0
12 TraesCS1A01G133400 chr1D 98.079 1145 17 3 369 1508 127934563 127933419 0.000000e+00 1988.0
13 TraesCS1A01G133400 chr1D 96.534 779 26 1 1543 2320 127933419 127932641 0.000000e+00 1288.0
14 TraesCS1A01G133400 chr1D 84.615 338 30 11 8361 8697 127926204 127925888 5.200000e-82 316.0
15 TraesCS1A01G133400 chr1D 95.652 92 4 0 286 377 127941176 127941085 2.010000e-31 148.0
16 TraesCS1A01G133400 chr1D 95.402 87 4 0 2316 2402 317191215 317191301 1.210000e-28 139.0
17 TraesCS1A01G133400 chr4B 90.459 283 25 2 1 282 126971929 126971648 1.090000e-98 372.0
18 TraesCS1A01G133400 chr3A 90.741 270 23 2 13 281 747152239 747152507 8.520000e-95 359.0
19 TraesCS1A01G133400 chr3A 89.531 277 24 4 10 282 530909746 530910021 6.630000e-91 346.0
20 TraesCS1A01G133400 chr3A 89.630 270 24 3 13 281 747092163 747092429 3.090000e-89 340.0
21 TraesCS1A01G133400 chr3A 89.259 270 25 3 13 281 747113039 747113305 1.440000e-87 335.0
22 TraesCS1A01G133400 chr2D 88.339 283 31 2 1 282 319611174 319611455 1.110000e-88 339.0
23 TraesCS1A01G133400 chr2D 91.209 91 6 2 2318 2406 278358779 278358689 1.220000e-23 122.0
24 TraesCS1A01G133400 chr2D 89.000 100 8 3 2305 2403 574413520 574413617 4.380000e-23 121.0
25 TraesCS1A01G133400 chr6B 76.826 397 78 10 8485 8875 334223332 334223720 2.520000e-50 211.0
26 TraesCS1A01G133400 chr7B 81.481 243 41 3 8485 8725 303127631 303127871 7.070000e-46 196.0
27 TraesCS1A01G133400 chr7B 77.320 291 58 7 8484 8772 148369090 148368806 1.990000e-36 165.0
28 TraesCS1A01G133400 chr7B 93.750 48 3 0 8789 8836 303127910 303127957 1.240000e-08 73.1
29 TraesCS1A01G133400 chr6D 74.811 397 86 11 8485 8875 201145307 201144919 5.540000e-37 167.0
30 TraesCS1A01G133400 chr5A 89.796 98 8 2 2318 2413 113720088 113720185 3.380000e-24 124.0
31 TraesCS1A01G133400 chr3D 91.209 91 6 2 2314 2403 540563474 540563385 1.220000e-23 122.0
32 TraesCS1A01G133400 chr3D 89.474 95 8 2 2310 2403 164808301 164808394 1.570000e-22 119.0
33 TraesCS1A01G133400 chr3D 89.474 95 8 2 2310 2403 392282070 392282163 1.570000e-22 119.0
34 TraesCS1A01G133400 chr6A 90.323 93 7 2 2310 2401 1090277 1090368 4.380000e-23 121.0
35 TraesCS1A01G133400 chr7A 82.203 118 16 5 8715 8830 341429204 341429318 7.370000e-16 97.1
36 TraesCS1A01G133400 chr5B 74.286 245 55 7 8484 8725 569861912 569861673 7.370000e-16 97.1
37 TraesCS1A01G133400 chr3B 84.146 82 11 2 4585 4666 414785701 414785780 2.670000e-10 78.7
38 TraesCS1A01G133400 chr7D 93.333 45 3 0 8872 8916 366849983 366850027 5.780000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G133400 chr1A 186988070 186996992 8922 True 16478.0 16478 100.0000 1 8923 1 chr1A.!!$R1 8922
1 TraesCS1A01G133400 chr1B 228169535 228176052 6517 True 4919.5 9175 89.5595 2407 8923 2 chr1B.!!$R3 6516
2 TraesCS1A01G133400 chr1B 228176049 228178447 2398 True 1699.0 2649 96.1225 286 2320 2 chr1B.!!$R4 2034
3 TraesCS1A01G133400 chr1D 127925888 127934563 8675 True 2628.0 5675 94.3898 369 8697 5 chr1D.!!$R2 8328

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
25 26 0.036010 AAACATGCAGCTAGTCCGCT 60.036 50.000 0.00 0.00 41.90 5.52 F
1866 2231 0.250510 TGCGGTTGGTATTCACAGCA 60.251 50.000 0.00 0.00 0.00 4.41 F
2861 3239 1.029408 TTGCTGTGCCAGTTCAACGT 61.029 50.000 4.45 0.00 33.43 3.99 F
3497 3875 1.079490 TGAGTCTGGAATCTGGACCCT 59.921 52.381 0.02 0.00 0.00 4.34 F
4201 4587 0.250295 TTCCCTGTCGTTTCTGCAGG 60.250 55.000 15.13 0.00 46.83 4.85 F
5556 6526 0.471022 TCTGTACCACTGTCCAGGCA 60.471 55.000 0.00 0.00 29.94 4.75 F
5752 6722 0.110678 TAATTTCGGCACACACCCCA 59.889 50.000 0.00 0.00 0.00 4.96 F
5811 6781 2.028125 CTCCCGAGCCAAATCGCCTA 62.028 60.000 0.00 0.00 41.37 3.93 F
6895 7908 1.757682 AGTTGTTGTTTTGCTCCGGA 58.242 45.000 2.93 2.93 0.00 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1979 2344 0.248866 CGAACTGTGTGGCCAAAACC 60.249 55.000 7.24 0.0 0.00 3.27 R
3601 3979 0.700564 AGAAGAAATGGAGCAGCCCA 59.299 50.000 5.20 5.2 41.05 5.36 R
3859 4237 1.601171 CTCTTGCAGAGTGGGGAGG 59.399 63.158 5.34 0.0 37.57 4.30 R
5363 6323 1.004745 CTAGGTGACCTGGCAATTGGT 59.995 52.381 15.83 0.0 39.60 3.67 R
5601 6571 0.936297 CAACAGTGCTTGCGGCTTTC 60.936 55.000 0.00 0.0 42.39 2.62 R
6888 7901 0.673437 CTCAGAGATCCTTCCGGAGC 59.327 60.000 3.34 0.0 46.14 4.70 R
6889 7902 2.065899 ACTCAGAGATCCTTCCGGAG 57.934 55.000 3.34 0.0 44.06 4.63 R
7080 8099 4.216902 TCAGAACAAATCAACAGCATCAGG 59.783 41.667 0.00 0.0 0.00 3.86 R
8493 9577 0.371989 CAAATGATACGCGCCGTTGA 59.628 50.000 5.73 0.0 41.54 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.539346 GACAGCAAACATGCAGCTAG 57.461 50.000 6.79 5.18 36.73 3.42
20 21 1.808945 GACAGCAAACATGCAGCTAGT 59.191 47.619 6.79 7.72 36.73 2.57
21 22 1.808945 ACAGCAAACATGCAGCTAGTC 59.191 47.619 6.79 0.00 36.73 2.59
22 23 1.131883 CAGCAAACATGCAGCTAGTCC 59.868 52.381 6.79 0.00 36.73 3.85
23 24 0.097674 GCAAACATGCAGCTAGTCCG 59.902 55.000 0.00 0.00 34.41 4.79
24 25 0.097674 CAAACATGCAGCTAGTCCGC 59.902 55.000 0.00 0.00 0.00 5.54
25 26 0.036010 AAACATGCAGCTAGTCCGCT 60.036 50.000 0.00 0.00 41.90 5.52
26 27 0.824109 AACATGCAGCTAGTCCGCTA 59.176 50.000 0.00 0.00 38.41 4.26
27 28 0.824109 ACATGCAGCTAGTCCGCTAA 59.176 50.000 0.00 0.00 38.41 3.09
28 29 1.207089 ACATGCAGCTAGTCCGCTAAA 59.793 47.619 0.00 0.00 38.41 1.85
29 30 1.863454 CATGCAGCTAGTCCGCTAAAG 59.137 52.381 0.00 0.00 38.41 1.85
30 31 0.895530 TGCAGCTAGTCCGCTAAAGT 59.104 50.000 0.00 0.00 38.41 2.66
31 32 1.275291 TGCAGCTAGTCCGCTAAAGTT 59.725 47.619 0.00 0.00 38.41 2.66
32 33 2.494471 TGCAGCTAGTCCGCTAAAGTTA 59.506 45.455 0.00 0.00 38.41 2.24
33 34 3.117046 GCAGCTAGTCCGCTAAAGTTAG 58.883 50.000 0.00 0.00 38.41 2.34
46 47 5.539582 CTAAAGTTAGCCGCATACAACAA 57.460 39.130 0.00 0.00 0.00 2.83
47 48 4.839668 AAAGTTAGCCGCATACAACAAA 57.160 36.364 0.00 0.00 0.00 2.83
48 49 3.824414 AGTTAGCCGCATACAACAAAC 57.176 42.857 0.00 0.00 0.00 2.93
49 50 2.486592 AGTTAGCCGCATACAACAAACC 59.513 45.455 0.00 0.00 0.00 3.27
50 51 2.186532 TAGCCGCATACAACAAACCA 57.813 45.000 0.00 0.00 0.00 3.67
51 52 1.323412 AGCCGCATACAACAAACCAA 58.677 45.000 0.00 0.00 0.00 3.67
52 53 1.269448 AGCCGCATACAACAAACCAAG 59.731 47.619 0.00 0.00 0.00 3.61
53 54 1.000717 GCCGCATACAACAAACCAAGT 60.001 47.619 0.00 0.00 0.00 3.16
54 55 2.920647 GCCGCATACAACAAACCAAGTC 60.921 50.000 0.00 0.00 0.00 3.01
55 56 2.570169 CGCATACAACAAACCAAGTCG 58.430 47.619 0.00 0.00 0.00 4.18
56 57 2.664424 CGCATACAACAAACCAAGTCGG 60.664 50.000 0.00 0.00 42.50 4.79
57 58 2.920647 GCATACAACAAACCAAGTCGGC 60.921 50.000 0.00 0.00 39.03 5.54
58 59 1.310904 TACAACAAACCAAGTCGGCC 58.689 50.000 0.00 0.00 39.03 6.13
59 60 1.008995 CAACAAACCAAGTCGGCCG 60.009 57.895 22.12 22.12 39.03 6.13
60 61 2.190841 AACAAACCAAGTCGGCCGG 61.191 57.895 27.83 11.50 39.03 6.13
61 62 2.281208 CAAACCAAGTCGGCCGGA 60.281 61.111 27.83 9.51 39.03 5.14
62 63 2.032071 AAACCAAGTCGGCCGGAG 59.968 61.111 27.83 12.54 39.03 4.63
63 64 2.513259 AAACCAAGTCGGCCGGAGA 61.513 57.895 27.83 2.10 39.03 3.71
64 65 1.838073 AAACCAAGTCGGCCGGAGAT 61.838 55.000 27.83 6.56 39.03 2.75
65 66 1.838073 AACCAAGTCGGCCGGAGATT 61.838 55.000 27.83 12.16 39.03 2.40
66 67 0.974010 ACCAAGTCGGCCGGAGATTA 60.974 55.000 27.83 0.17 39.03 1.75
67 68 0.393077 CCAAGTCGGCCGGAGATTAT 59.607 55.000 27.83 1.72 0.00 1.28
68 69 1.202651 CCAAGTCGGCCGGAGATTATT 60.203 52.381 27.83 6.91 0.00 1.40
69 70 2.036733 CCAAGTCGGCCGGAGATTATTA 59.963 50.000 27.83 0.00 0.00 0.98
70 71 3.318017 CAAGTCGGCCGGAGATTATTAG 58.682 50.000 27.83 0.57 0.00 1.73
71 72 1.272769 AGTCGGCCGGAGATTATTAGC 59.727 52.381 27.83 1.37 0.00 3.09
72 73 1.000506 GTCGGCCGGAGATTATTAGCA 59.999 52.381 27.83 0.00 0.00 3.49
73 74 1.000506 TCGGCCGGAGATTATTAGCAC 59.999 52.381 27.83 0.00 0.00 4.40
74 75 1.429463 GGCCGGAGATTATTAGCACG 58.571 55.000 5.05 0.00 0.00 5.34
75 76 1.270147 GGCCGGAGATTATTAGCACGT 60.270 52.381 5.05 0.00 0.00 4.49
76 77 2.029649 GGCCGGAGATTATTAGCACGTA 60.030 50.000 5.05 0.00 0.00 3.57
77 78 2.985139 GCCGGAGATTATTAGCACGTAC 59.015 50.000 5.05 0.00 0.00 3.67
78 79 3.305199 GCCGGAGATTATTAGCACGTACT 60.305 47.826 5.05 0.00 0.00 2.73
79 80 4.083110 GCCGGAGATTATTAGCACGTACTA 60.083 45.833 5.05 0.00 0.00 1.82
80 81 5.629097 CCGGAGATTATTAGCACGTACTAG 58.371 45.833 0.00 0.00 0.00 2.57
81 82 5.180868 CCGGAGATTATTAGCACGTACTAGT 59.819 44.000 0.00 0.00 0.00 2.57
82 83 6.369890 CCGGAGATTATTAGCACGTACTAGTA 59.630 42.308 0.00 0.00 0.00 1.82
83 84 7.065563 CCGGAGATTATTAGCACGTACTAGTAT 59.934 40.741 5.75 0.00 0.00 2.12
84 85 8.115520 CGGAGATTATTAGCACGTACTAGTATC 58.884 40.741 5.75 3.36 0.00 2.24
85 86 9.165035 GGAGATTATTAGCACGTACTAGTATCT 57.835 37.037 5.75 12.49 0.00 1.98
131 132 9.251440 ACAATATAGGGGTAAAAAGGTCTTTTC 57.749 33.333 8.86 0.00 41.45 2.29
132 133 9.250246 CAATATAGGGGTAAAAAGGTCTTTTCA 57.750 33.333 8.86 0.00 41.45 2.69
136 137 7.718334 AGGGGTAAAAAGGTCTTTTCATATG 57.282 36.000 8.86 0.00 41.45 1.78
137 138 7.246027 AGGGGTAAAAAGGTCTTTTCATATGT 58.754 34.615 8.86 0.00 41.45 2.29
138 139 7.396339 AGGGGTAAAAAGGTCTTTTCATATGTC 59.604 37.037 8.86 0.00 41.45 3.06
139 140 7.177744 GGGGTAAAAAGGTCTTTTCATATGTCA 59.822 37.037 8.86 0.00 41.45 3.58
140 141 8.581578 GGGTAAAAAGGTCTTTTCATATGTCAA 58.418 33.333 8.86 0.00 41.45 3.18
148 149 8.739972 AGGTCTTTTCATATGTCAATTAACACC 58.260 33.333 1.90 0.00 30.55 4.16
149 150 8.739972 GGTCTTTTCATATGTCAATTAACACCT 58.260 33.333 1.90 0.00 30.55 4.00
156 157 8.243426 TCATATGTCAATTAACACCTTCAAAGC 58.757 33.333 1.90 0.00 30.55 3.51
157 158 6.655078 ATGTCAATTAACACCTTCAAAGCT 57.345 33.333 0.00 0.00 30.55 3.74
158 159 6.463995 TGTCAATTAACACCTTCAAAGCTT 57.536 33.333 0.00 0.00 0.00 3.74
159 160 7.575414 TGTCAATTAACACCTTCAAAGCTTA 57.425 32.000 0.00 0.00 0.00 3.09
160 161 8.001881 TGTCAATTAACACCTTCAAAGCTTAA 57.998 30.769 0.00 0.00 0.00 1.85
161 162 8.470805 TGTCAATTAACACCTTCAAAGCTTAAA 58.529 29.630 0.00 0.00 0.00 1.52
162 163 9.308318 GTCAATTAACACCTTCAAAGCTTAAAA 57.692 29.630 0.00 0.00 0.00 1.52
168 169 6.899114 ACACCTTCAAAGCTTAAAATAGACG 58.101 36.000 0.00 0.00 0.00 4.18
169 170 6.708949 ACACCTTCAAAGCTTAAAATAGACGA 59.291 34.615 0.00 0.00 0.00 4.20
170 171 7.095187 ACACCTTCAAAGCTTAAAATAGACGAG 60.095 37.037 0.00 0.00 0.00 4.18
171 172 7.117812 CACCTTCAAAGCTTAAAATAGACGAGA 59.882 37.037 0.00 0.00 0.00 4.04
172 173 7.332182 ACCTTCAAAGCTTAAAATAGACGAGAG 59.668 37.037 0.00 0.00 0.00 3.20
187 188 4.755266 ACGAGAGTGTTATAAAGGGCAT 57.245 40.909 0.00 0.00 46.97 4.40
188 189 5.864418 ACGAGAGTGTTATAAAGGGCATA 57.136 39.130 0.00 0.00 46.97 3.14
189 190 6.229936 ACGAGAGTGTTATAAAGGGCATAA 57.770 37.500 0.00 0.00 46.97 1.90
190 191 6.646267 ACGAGAGTGTTATAAAGGGCATAAA 58.354 36.000 0.00 0.00 46.97 1.40
191 192 7.107542 ACGAGAGTGTTATAAAGGGCATAAAA 58.892 34.615 0.00 0.00 46.97 1.52
192 193 7.773690 ACGAGAGTGTTATAAAGGGCATAAAAT 59.226 33.333 0.00 0.00 46.97 1.82
193 194 8.621286 CGAGAGTGTTATAAAGGGCATAAAATT 58.379 33.333 0.00 0.00 0.00 1.82
203 204 7.539034 AAAGGGCATAAAATTTAGACACAGT 57.461 32.000 0.00 0.00 0.00 3.55
204 205 6.515272 AGGGCATAAAATTTAGACACAGTG 57.485 37.500 0.00 0.00 0.00 3.66
205 206 6.010219 AGGGCATAAAATTTAGACACAGTGT 58.990 36.000 5.68 5.68 0.00 3.55
206 207 6.493458 AGGGCATAAAATTTAGACACAGTGTT 59.507 34.615 7.86 0.77 0.00 3.32
207 208 7.668052 AGGGCATAAAATTTAGACACAGTGTTA 59.332 33.333 7.86 0.00 0.00 2.41
208 209 8.466798 GGGCATAAAATTTAGACACAGTGTTAT 58.533 33.333 7.86 2.58 0.00 1.89
236 237 7.947282 AGGAAAGAAAATATTTTTCGGTGTCA 58.053 30.769 14.45 0.00 32.88 3.58
237 238 8.417884 AGGAAAGAAAATATTTTTCGGTGTCAA 58.582 29.630 14.45 0.00 32.88 3.18
238 239 9.036671 GGAAAGAAAATATTTTTCGGTGTCAAA 57.963 29.630 14.45 0.00 32.88 2.69
242 243 9.855021 AGAAAATATTTTTCGGTGTCAAATAGG 57.145 29.630 14.45 0.00 33.86 2.57
243 244 8.996024 AAAATATTTTTCGGTGTCAAATAGGG 57.004 30.769 7.64 0.00 0.00 3.53
244 245 7.948034 AATATTTTTCGGTGTCAAATAGGGA 57.052 32.000 0.00 0.00 0.00 4.20
245 246 7.948034 ATATTTTTCGGTGTCAAATAGGGAA 57.052 32.000 0.00 0.00 0.00 3.97
246 247 6.658188 ATTTTTCGGTGTCAAATAGGGAAA 57.342 33.333 0.00 0.00 0.00 3.13
247 248 5.441709 TTTTCGGTGTCAAATAGGGAAAC 57.558 39.130 0.00 0.00 0.00 2.78
248 249 3.773418 TCGGTGTCAAATAGGGAAACA 57.227 42.857 0.00 0.00 0.00 2.83
249 250 4.088056 TCGGTGTCAAATAGGGAAACAA 57.912 40.909 0.00 0.00 0.00 2.83
250 251 4.462133 TCGGTGTCAAATAGGGAAACAAA 58.538 39.130 0.00 0.00 0.00 2.83
251 252 4.888239 TCGGTGTCAAATAGGGAAACAAAA 59.112 37.500 0.00 0.00 0.00 2.44
252 253 5.536916 TCGGTGTCAAATAGGGAAACAAAAT 59.463 36.000 0.00 0.00 0.00 1.82
253 254 6.041069 TCGGTGTCAAATAGGGAAACAAAATT 59.959 34.615 0.00 0.00 0.00 1.82
254 255 6.704050 CGGTGTCAAATAGGGAAACAAAATTT 59.296 34.615 0.00 0.00 0.00 1.82
255 256 7.868415 CGGTGTCAAATAGGGAAACAAAATTTA 59.132 33.333 0.00 0.00 0.00 1.40
256 257 9.549078 GGTGTCAAATAGGGAAACAAAATTTAA 57.451 29.630 0.00 0.00 0.00 1.52
260 261 9.549078 TCAAATAGGGAAACAAAATTTAACACC 57.451 29.630 0.00 0.00 0.00 4.16
261 262 8.491950 CAAATAGGGAAACAAAATTTAACACCG 58.508 33.333 0.00 0.00 0.00 4.94
262 263 5.601583 AGGGAAACAAAATTTAACACCGT 57.398 34.783 0.00 0.00 0.00 4.83
263 264 5.353111 AGGGAAACAAAATTTAACACCGTG 58.647 37.500 0.00 0.00 0.00 4.94
264 265 5.105269 AGGGAAACAAAATTTAACACCGTGT 60.105 36.000 0.00 0.00 0.00 4.49
265 266 5.581479 GGGAAACAAAATTTAACACCGTGTT 59.419 36.000 20.29 20.29 43.88 3.32
266 267 6.755607 GGGAAACAAAATTTAACACCGTGTTA 59.244 34.615 18.26 18.26 41.45 2.41
279 280 7.754851 AACACCGTGTTAAATAAGGAATTCT 57.245 32.000 15.36 0.00 39.09 2.40
280 281 7.373778 ACACCGTGTTAAATAAGGAATTCTC 57.626 36.000 5.23 0.00 0.00 2.87
281 282 7.166167 ACACCGTGTTAAATAAGGAATTCTCT 58.834 34.615 5.23 0.00 0.00 3.10
282 283 7.664318 ACACCGTGTTAAATAAGGAATTCTCTT 59.336 33.333 5.23 9.48 0.00 2.85
283 284 9.158233 CACCGTGTTAAATAAGGAATTCTCTTA 57.842 33.333 14.74 14.74 0.00 2.10
284 285 9.729281 ACCGTGTTAAATAAGGAATTCTCTTAA 57.271 29.630 15.76 6.99 31.49 1.85
560 572 0.894835 ATTGAACACCCCAATTCGGC 59.105 50.000 0.00 0.00 30.72 5.54
690 702 6.153510 GCTTGGATCTTTCCTTGGATTAACTT 59.846 38.462 0.00 0.00 43.07 2.66
692 704 5.418840 TGGATCTTTCCTTGGATTAACTTGC 59.581 40.000 0.00 0.00 43.07 4.01
897 909 8.358895 TCATGAATAATTTGTTGCAAGACTGAA 58.641 29.630 0.00 0.00 0.00 3.02
898 910 8.980610 CATGAATAATTTGTTGCAAGACTGAAA 58.019 29.630 0.00 0.00 0.00 2.69
956 968 2.892025 GCCAATGCCCTGATTCTGT 58.108 52.632 0.00 0.00 0.00 3.41
1191 1203 2.094752 GGTGTATGTTGTTGCATGGTCC 60.095 50.000 0.00 0.00 0.00 4.46
1341 1353 1.133976 GTGCAGGAAGGGCAGATGTAT 60.134 52.381 0.00 0.00 42.85 2.29
1524 1540 5.575995 CGAAAGAACTAGTTAAGGCACCTAC 59.424 44.000 8.42 0.00 0.00 3.18
1717 1733 1.063806 GTGCACTAGTCAAGTCAGCG 58.936 55.000 10.32 0.00 35.76 5.18
1781 1797 2.280797 GAAGTGCCACGTCCAGCA 60.281 61.111 0.00 0.49 36.44 4.41
1808 1824 1.905215 ACACATTAGTCTGCTCTGGCT 59.095 47.619 0.00 0.00 39.59 4.75
1866 2231 0.250510 TGCGGTTGGTATTCACAGCA 60.251 50.000 0.00 0.00 0.00 4.41
1888 2253 5.510520 GCATTTATTCCAGTTTGGTGGACAA 60.511 40.000 0.00 0.00 46.75 3.18
1929 2294 1.811266 CATGCAGCTTCCTACGCGT 60.811 57.895 19.17 19.17 0.00 6.01
1950 2315 3.670991 GTGTCTCGTCTGATGTTTCTGTC 59.329 47.826 0.00 0.00 0.00 3.51
2023 2388 1.341531 CGGTAATACCTCCTGGCAGAG 59.658 57.143 17.94 11.24 35.66 3.35
2075 2440 1.933021 ACGGGTGTAGAATGAGACCA 58.067 50.000 0.00 0.00 34.40 4.02
2094 2459 4.677182 ACCATATTTTCCTTGAACCAGCT 58.323 39.130 0.00 0.00 0.00 4.24
2126 2491 1.067142 GTCGGCATGACCTTGTACAGA 60.067 52.381 0.00 0.00 42.04 3.41
2129 2494 2.159043 CGGCATGACCTTGTACAGATCT 60.159 50.000 0.00 0.00 35.61 2.75
2328 2693 6.330178 ACTCTATGTAACTACTCCCTCTGT 57.670 41.667 0.00 0.00 0.00 3.41
2329 2694 6.358991 ACTCTATGTAACTACTCCCTCTGTC 58.641 44.000 0.00 0.00 0.00 3.51
2330 2695 5.692928 TCTATGTAACTACTCCCTCTGTCC 58.307 45.833 0.00 0.00 0.00 4.02
2331 2696 3.097342 TGTAACTACTCCCTCTGTCCC 57.903 52.381 0.00 0.00 0.00 4.46
2332 2697 2.380932 TGTAACTACTCCCTCTGTCCCA 59.619 50.000 0.00 0.00 0.00 4.37
2333 2698 2.950990 AACTACTCCCTCTGTCCCAT 57.049 50.000 0.00 0.00 0.00 4.00
2334 2699 4.231195 TGTAACTACTCCCTCTGTCCCATA 59.769 45.833 0.00 0.00 0.00 2.74
2335 2700 4.348020 AACTACTCCCTCTGTCCCATAA 57.652 45.455 0.00 0.00 0.00 1.90
2336 2701 4.561254 ACTACTCCCTCTGTCCCATAAT 57.439 45.455 0.00 0.00 0.00 1.28
2337 2702 5.681494 ACTACTCCCTCTGTCCCATAATA 57.319 43.478 0.00 0.00 0.00 0.98
2338 2703 6.234404 ACTACTCCCTCTGTCCCATAATAT 57.766 41.667 0.00 0.00 0.00 1.28
2339 2704 7.358255 ACTACTCCCTCTGTCCCATAATATA 57.642 40.000 0.00 0.00 0.00 0.86
2340 2705 7.776745 ACTACTCCCTCTGTCCCATAATATAA 58.223 38.462 0.00 0.00 0.00 0.98
2341 2706 7.896496 ACTACTCCCTCTGTCCCATAATATAAG 59.104 40.741 0.00 0.00 0.00 1.73
2342 2707 6.875469 ACTCCCTCTGTCCCATAATATAAGA 58.125 40.000 0.00 0.00 0.00 2.10
2343 2708 6.957020 ACTCCCTCTGTCCCATAATATAAGAG 59.043 42.308 0.00 0.00 0.00 2.85
2344 2709 5.721960 TCCCTCTGTCCCATAATATAAGAGC 59.278 44.000 0.00 0.00 0.00 4.09
2345 2710 5.394663 CCCTCTGTCCCATAATATAAGAGCG 60.395 48.000 0.00 0.00 0.00 5.03
2346 2711 5.186021 CCTCTGTCCCATAATATAAGAGCGT 59.814 44.000 0.00 0.00 0.00 5.07
2347 2712 6.295349 CCTCTGTCCCATAATATAAGAGCGTT 60.295 42.308 0.00 0.00 0.00 4.84
2348 2713 7.062749 TCTGTCCCATAATATAAGAGCGTTT 57.937 36.000 0.00 0.00 0.00 3.60
2349 2714 7.506114 TCTGTCCCATAATATAAGAGCGTTTT 58.494 34.615 0.00 0.00 0.00 2.43
2350 2715 7.990886 TCTGTCCCATAATATAAGAGCGTTTTT 59.009 33.333 0.00 0.00 0.00 1.94
2351 2716 9.268268 CTGTCCCATAATATAAGAGCGTTTTTA 57.732 33.333 0.00 0.00 0.00 1.52
2352 2717 9.787435 TGTCCCATAATATAAGAGCGTTTTTAT 57.213 29.630 0.91 0.91 0.00 1.40
2354 2719 8.726988 TCCCATAATATAAGAGCGTTTTTATGC 58.273 33.333 5.47 0.00 0.00 3.14
2355 2720 8.730680 CCCATAATATAAGAGCGTTTTTATGCT 58.269 33.333 5.47 0.00 45.90 3.79
2364 2729 7.932120 AGAGCGTTTTTATGCTATACTAGTG 57.068 36.000 5.39 0.00 42.60 2.74
2365 2730 7.490000 AGAGCGTTTTTATGCTATACTAGTGT 58.510 34.615 5.39 0.39 42.60 3.55
2366 2731 7.980099 AGAGCGTTTTTATGCTATACTAGTGTT 59.020 33.333 5.39 0.00 42.60 3.32
2367 2732 9.241317 GAGCGTTTTTATGCTATACTAGTGTTA 57.759 33.333 5.39 0.00 42.60 2.41
2368 2733 9.590451 AGCGTTTTTATGCTATACTAGTGTTAA 57.410 29.630 5.39 0.00 40.28 2.01
2377 2742 9.649167 ATGCTATACTAGTGTTAAAAACGTTCT 57.351 29.630 5.39 0.00 0.00 3.01
2378 2743 9.480053 TGCTATACTAGTGTTAAAAACGTTCTT 57.520 29.630 5.39 0.00 0.00 2.52
2395 2760 9.751542 AAACGTTCTTATATTATGAGACAGAGG 57.248 33.333 0.00 0.00 0.00 3.69
2396 2761 7.887381 ACGTTCTTATATTATGAGACAGAGGG 58.113 38.462 0.00 0.00 0.00 4.30
2397 2762 7.724506 ACGTTCTTATATTATGAGACAGAGGGA 59.275 37.037 0.00 0.00 0.00 4.20
2398 2763 8.240682 CGTTCTTATATTATGAGACAGAGGGAG 58.759 40.741 0.00 0.00 0.00 4.30
2399 2764 9.084533 GTTCTTATATTATGAGACAGAGGGAGT 57.915 37.037 0.00 0.00 0.00 3.85
2401 2766 9.742144 TCTTATATTATGAGACAGAGGGAGTAC 57.258 37.037 0.00 0.00 0.00 2.73
2402 2767 9.521841 CTTATATTATGAGACAGAGGGAGTACA 57.478 37.037 0.00 0.00 0.00 2.90
2403 2768 9.877222 TTATATTATGAGACAGAGGGAGTACAA 57.123 33.333 0.00 0.00 0.00 2.41
2404 2769 6.723298 ATTATGAGACAGAGGGAGTACAAG 57.277 41.667 0.00 0.00 0.00 3.16
2405 2770 3.527507 TGAGACAGAGGGAGTACAAGT 57.472 47.619 0.00 0.00 0.00 3.16
2406 2771 3.422796 TGAGACAGAGGGAGTACAAGTC 58.577 50.000 0.00 0.00 0.00 3.01
2407 2772 3.074687 TGAGACAGAGGGAGTACAAGTCT 59.925 47.826 0.00 0.00 37.55 3.24
2408 2773 4.288887 TGAGACAGAGGGAGTACAAGTCTA 59.711 45.833 0.00 0.00 35.24 2.59
2409 2774 4.591929 AGACAGAGGGAGTACAAGTCTAC 58.408 47.826 0.00 0.00 33.51 2.59
2410 2775 4.043059 AGACAGAGGGAGTACAAGTCTACA 59.957 45.833 0.00 0.00 33.51 2.74
2411 2776 4.080687 ACAGAGGGAGTACAAGTCTACAC 58.919 47.826 0.00 0.00 0.00 2.90
2431 2796 5.598769 ACACTCTACAACTTGGTACTGTTC 58.401 41.667 0.00 0.00 0.00 3.18
2466 2831 5.185454 TGACAGAAAGTGATGGCGAATATT 58.815 37.500 0.00 0.00 0.00 1.28
2727 3105 5.963176 TGGTACTCGTTATGTGTCTACAA 57.037 39.130 0.00 0.00 40.84 2.41
2828 3206 6.369615 GCTGAAACCTTAAATGTCAATGCATT 59.630 34.615 5.99 5.99 40.43 3.56
2861 3239 1.029408 TTGCTGTGCCAGTTCAACGT 61.029 50.000 4.45 0.00 33.43 3.99
3276 3654 2.365293 GTCTCCCCACAAAAAGCAATGT 59.635 45.455 0.00 0.00 0.00 2.71
3496 3874 1.573108 TGAGTCTGGAATCTGGACCC 58.427 55.000 0.02 0.00 0.00 4.46
3497 3875 1.079490 TGAGTCTGGAATCTGGACCCT 59.921 52.381 0.02 0.00 0.00 4.34
3669 4047 2.686405 TCATTCACCGCGTAGTACTCAT 59.314 45.455 4.92 0.00 0.00 2.90
3859 4237 1.523758 CTGTGTGGTCTTTAGGGTGC 58.476 55.000 0.00 0.00 0.00 5.01
4064 4449 3.119137 GGTTTCAGATTGCGGCCTAATTT 60.119 43.478 0.00 0.00 0.00 1.82
4201 4587 0.250295 TTCCCTGTCGTTTCTGCAGG 60.250 55.000 15.13 0.00 46.83 4.85
4273 4659 1.553248 TCCACACCTTTCTGTATCCCG 59.447 52.381 0.00 0.00 0.00 5.14
4458 4844 3.266636 ACGTCACATCGCCAAATATTGA 58.733 40.909 0.00 0.00 0.00 2.57
4543 4929 2.198827 TCAAGGCACATACCTGTTGG 57.801 50.000 0.00 0.00 39.93 3.77
4671 5057 1.080705 GGTCGTCGACTTCACCCAG 60.081 63.158 23.69 0.00 32.47 4.45
4673 5059 0.877071 GTCGTCGACTTCACCCAGTA 59.123 55.000 18.09 0.00 0.00 2.74
4688 5074 3.956848 ACCCAGTAGTAACCCGATTAGTC 59.043 47.826 0.00 0.00 0.00 2.59
4905 5858 2.666317 ACAGCAAGTAGGCCAAAAGTT 58.334 42.857 5.01 0.00 0.00 2.66
4950 5903 4.141959 GCATCTCTAGTCCTTTGCTCTTCT 60.142 45.833 0.00 0.00 0.00 2.85
5071 6024 7.517614 TCCAATTCATGTAAAGCAAGTAACA 57.482 32.000 0.00 0.00 0.00 2.41
5219 6179 8.985315 TGATAATTATTCTTCAATGCTCACCT 57.015 30.769 0.00 0.00 0.00 4.00
5363 6323 1.070105 CGACCTGACCAAACCCGAA 59.930 57.895 0.00 0.00 0.00 4.30
5469 6429 5.397447 CCACCTTACCCTACATGATGCTTAA 60.397 44.000 0.00 0.00 0.00 1.85
5472 6432 5.397447 CCTTACCCTACATGATGCTTAACCA 60.397 44.000 0.00 0.00 0.00 3.67
5483 6443 5.316167 TGATGCTTAACCATGTGTTCTTCT 58.684 37.500 3.25 0.00 38.42 2.85
5500 6460 0.991146 TCTCTAGTTTGGCCCATGCA 59.009 50.000 0.00 0.00 40.13 3.96
5556 6526 0.471022 TCTGTACCACTGTCCAGGCA 60.471 55.000 0.00 0.00 29.94 4.75
5601 6571 4.625742 CAGTACATAAGTTGGGACGTCAAG 59.374 45.833 18.91 0.00 0.00 3.02
5752 6722 0.110678 TAATTTCGGCACACACCCCA 59.889 50.000 0.00 0.00 0.00 4.96
5778 6748 2.806244 CAAACTTGAAGGTCCAGGTACG 59.194 50.000 0.00 0.00 0.00 3.67
5811 6781 2.028125 CTCCCGAGCCAAATCGCCTA 62.028 60.000 0.00 0.00 41.37 3.93
5820 6790 2.925724 CCAAATCGCCTACCCACATTA 58.074 47.619 0.00 0.00 0.00 1.90
5863 6833 5.695851 TTTTGAGCTGGAACAAGAGAATC 57.304 39.130 0.00 0.00 38.70 2.52
6009 6980 5.862860 GTGAAAGACTTAAGGTCCTAACTCG 59.137 44.000 7.53 0.00 45.54 4.18
6036 7007 2.290514 ACAGTTGACATGCACCATAGCT 60.291 45.455 0.00 0.00 34.99 3.32
6190 7161 5.853936 ACTATATTTGTATTCGCAGCAGGA 58.146 37.500 0.00 0.00 0.00 3.86
6286 7257 7.039882 GGCTAAGTGCTTCACATACTAGTTTA 58.960 38.462 0.00 0.00 42.39 2.01
6320 7293 6.386654 TGTGACTCAAAAAGTTTCTCCAAAC 58.613 36.000 0.00 0.00 42.14 2.93
6379 7354 2.828520 TCACATCTTGGAGAGGAGTCAC 59.171 50.000 0.00 0.00 29.42 3.67
6390 7365 6.830912 TGGAGAGGAGTCACATTTATAATGG 58.169 40.000 4.61 0.00 0.00 3.16
6397 7372 7.554118 AGGAGTCACATTTATAATGGACTTGTG 59.446 37.037 17.01 0.00 35.88 3.33
6398 7373 7.336931 GGAGTCACATTTATAATGGACTTGTGT 59.663 37.037 17.01 0.00 35.88 3.72
6554 7554 4.706842 TCTCTTAAAAAGGACAGCCACT 57.293 40.909 0.00 0.00 36.29 4.00
6616 7616 7.645402 TGTGAATGAAATGCTCATATGCTTAG 58.355 34.615 0.00 0.00 44.43 2.18
6870 7883 6.488683 ACCCTTTCGTCATCAAGAAATTGTTA 59.511 34.615 0.00 0.00 36.02 2.41
6889 7902 6.698359 TGTTAACTGAAGTTGTTGTTTTGC 57.302 33.333 7.22 0.00 38.90 3.68
6891 7904 6.584563 TGTTAACTGAAGTTGTTGTTTTGCTC 59.415 34.615 7.22 0.00 38.90 4.26
6892 7905 4.110036 ACTGAAGTTGTTGTTTTGCTCC 57.890 40.909 0.00 0.00 0.00 4.70
6894 7907 2.159310 TGAAGTTGTTGTTTTGCTCCGG 60.159 45.455 0.00 0.00 0.00 5.14
6895 7908 1.757682 AGTTGTTGTTTTGCTCCGGA 58.242 45.000 2.93 2.93 0.00 5.14
6896 7909 2.096248 AGTTGTTGTTTTGCTCCGGAA 58.904 42.857 5.23 0.00 0.00 4.30
6897 7910 2.099098 AGTTGTTGTTTTGCTCCGGAAG 59.901 45.455 5.23 0.46 0.00 3.46
7080 8099 8.139989 TCTTACTTGGACTAGTACAACTTTCAC 58.860 37.037 16.89 0.00 30.62 3.18
8116 9135 1.131126 CGCCTGCTACTTTGGTGAATG 59.869 52.381 0.00 0.00 33.56 2.67
8234 9267 4.707448 AGAGCTGATTCGAAAGTCCTCTTA 59.293 41.667 0.00 0.00 33.09 2.10
8235 9268 5.362430 AGAGCTGATTCGAAAGTCCTCTTAT 59.638 40.000 0.00 0.00 33.09 1.73
8236 9269 5.355596 AGCTGATTCGAAAGTCCTCTTATG 58.644 41.667 0.00 0.00 33.09 1.90
8237 9270 5.127845 AGCTGATTCGAAAGTCCTCTTATGA 59.872 40.000 0.00 0.00 33.09 2.15
8239 9272 6.237969 GCTGATTCGAAAGTCCTCTTATGAAC 60.238 42.308 0.00 0.00 33.22 3.18
8242 9281 7.824289 TGATTCGAAAGTCCTCTTATGAACAAT 59.176 33.333 0.00 0.00 33.22 2.71
8316 9356 4.926238 TGCAAAGTTTTGTCGTTGAACATT 59.074 33.333 6.48 0.00 40.24 2.71
8317 9357 5.061560 TGCAAAGTTTTGTCGTTGAACATTC 59.938 36.000 6.48 0.00 40.24 2.67
8318 9358 5.061560 GCAAAGTTTTGTCGTTGAACATTCA 59.938 36.000 6.48 0.00 40.24 2.57
8319 9359 6.237808 GCAAAGTTTTGTCGTTGAACATTCAT 60.238 34.615 6.48 0.00 40.24 2.57
8320 9360 6.810888 AAGTTTTGTCGTTGAACATTCATG 57.189 33.333 0.00 0.00 37.00 3.07
8321 9361 6.130298 AGTTTTGTCGTTGAACATTCATGA 57.870 33.333 0.00 0.00 37.00 3.07
8322 9362 6.559810 AGTTTTGTCGTTGAACATTCATGAA 58.440 32.000 11.26 11.26 37.00 2.57
8323 9363 6.692681 AGTTTTGTCGTTGAACATTCATGAAG 59.307 34.615 14.54 8.57 37.00 3.02
8324 9364 5.749596 TTGTCGTTGAACATTCATGAAGT 57.250 34.783 14.54 9.18 37.00 3.01
8325 9365 5.749596 TGTCGTTGAACATTCATGAAGTT 57.250 34.783 14.54 16.40 37.00 2.66
8326 9366 6.130298 TGTCGTTGAACATTCATGAAGTTT 57.870 33.333 14.54 8.99 37.00 2.66
8327 9367 6.198687 TGTCGTTGAACATTCATGAAGTTTC 58.801 36.000 14.54 17.01 37.00 2.78
8328 9368 6.183360 TGTCGTTGAACATTCATGAAGTTTCA 60.183 34.615 21.99 21.99 42.14 2.69
8330 9370 7.059945 GTCGTTGAACATTCATGAAGTTTCATC 59.940 37.037 24.54 22.41 45.62 2.92
8331 9371 6.857451 CGTTGAACATTCATGAAGTTTCATCA 59.143 34.615 24.54 15.47 45.62 3.07
8332 9372 7.149080 CGTTGAACATTCATGAAGTTTCATCAC 60.149 37.037 24.54 20.63 45.62 3.06
8333 9373 6.372981 TGAACATTCATGAAGTTTCATCACG 58.627 36.000 21.99 0.00 45.62 4.35
8334 9374 5.300969 ACATTCATGAAGTTTCATCACGG 57.699 39.130 14.54 0.00 45.62 4.94
8335 9375 5.003160 ACATTCATGAAGTTTCATCACGGA 58.997 37.500 14.54 0.00 45.62 4.69
8336 9376 5.473162 ACATTCATGAAGTTTCATCACGGAA 59.527 36.000 14.54 6.20 45.62 4.30
8337 9377 6.151648 ACATTCATGAAGTTTCATCACGGAAT 59.848 34.615 14.54 7.94 45.62 3.01
8338 9378 5.550232 TCATGAAGTTTCATCACGGAATG 57.450 39.130 4.43 0.00 45.62 2.67
8339 9379 5.244755 TCATGAAGTTTCATCACGGAATGA 58.755 37.500 4.43 0.00 45.62 2.57
8340 9380 5.122239 TCATGAAGTTTCATCACGGAATGAC 59.878 40.000 4.43 0.00 45.62 3.06
8341 9381 4.384940 TGAAGTTTCATCACGGAATGACA 58.615 39.130 1.87 0.00 41.24 3.58
8342 9382 5.003160 TGAAGTTTCATCACGGAATGACAT 58.997 37.500 1.87 0.00 41.24 3.06
8343 9383 5.473162 TGAAGTTTCATCACGGAATGACATT 59.527 36.000 0.00 0.00 41.24 2.71
8344 9384 5.551760 AGTTTCATCACGGAATGACATTC 57.448 39.130 18.24 18.24 41.24 2.67
8345 9385 5.003160 AGTTTCATCACGGAATGACATTCA 58.997 37.500 25.59 9.05 41.24 2.57
8346 9386 5.473162 AGTTTCATCACGGAATGACATTCAA 59.527 36.000 25.59 9.86 41.24 2.69
8347 9387 5.550232 TTCATCACGGAATGACATTCAAG 57.450 39.130 25.59 20.68 41.24 3.02
8348 9388 4.831107 TCATCACGGAATGACATTCAAGA 58.169 39.130 25.59 19.62 41.24 3.02
8349 9389 5.244755 TCATCACGGAATGACATTCAAGAA 58.755 37.500 25.59 14.21 41.24 2.52
8350 9390 5.704978 TCATCACGGAATGACATTCAAGAAA 59.295 36.000 25.59 13.95 41.24 2.52
8351 9391 5.611796 TCACGGAATGACATTCAAGAAAG 57.388 39.130 25.59 14.91 41.03 2.62
8352 9392 4.083324 TCACGGAATGACATTCAAGAAAGC 60.083 41.667 25.59 8.84 41.03 3.51
8353 9393 4.074970 ACGGAATGACATTCAAGAAAGCT 58.925 39.130 25.59 4.44 41.03 3.74
8354 9394 4.154918 ACGGAATGACATTCAAGAAAGCTC 59.845 41.667 25.59 7.61 41.03 4.09
8355 9395 4.154737 CGGAATGACATTCAAGAAAGCTCA 59.845 41.667 25.59 0.00 41.03 4.26
8356 9396 5.163683 CGGAATGACATTCAAGAAAGCTCAT 60.164 40.000 25.59 0.00 41.03 2.90
8357 9397 6.034591 GGAATGACATTCAAGAAAGCTCATG 58.965 40.000 25.59 0.00 41.03 3.07
8358 9398 6.127814 GGAATGACATTCAAGAAAGCTCATGA 60.128 38.462 25.59 0.00 41.03 3.07
8359 9399 6.829229 ATGACATTCAAGAAAGCTCATGAA 57.171 33.333 0.00 6.07 41.95 2.57
8408 9492 5.050091 GCAGTCAGAAACTTTTCGAGATTCA 60.050 40.000 0.00 0.00 39.05 2.57
8413 9497 6.931281 TCAGAAACTTTTCGAGATTCATCACT 59.069 34.615 0.00 0.00 39.05 3.41
8422 9506 8.777865 TTTCGAGATTCATCACTGTTTAAGAT 57.222 30.769 0.00 0.00 0.00 2.40
8460 9544 2.110967 GCGCATGATGAGTGGCAGT 61.111 57.895 0.30 0.00 0.00 4.40
8482 9566 2.073816 AGCGTATGTTCTTTCCAACGG 58.926 47.619 0.00 0.00 0.00 4.44
8483 9567 1.465187 GCGTATGTTCTTTCCAACGGC 60.465 52.381 0.00 0.00 0.00 5.68
8484 9568 1.201877 CGTATGTTCTTTCCAACGGCG 60.202 52.381 4.80 4.80 0.00 6.46
8485 9569 2.070783 GTATGTTCTTTCCAACGGCGA 58.929 47.619 16.62 0.00 0.00 5.54
8486 9570 1.821216 ATGTTCTTTCCAACGGCGAT 58.179 45.000 16.62 0.00 0.00 4.58
8487 9571 2.459060 TGTTCTTTCCAACGGCGATA 57.541 45.000 16.62 0.00 0.00 2.92
8488 9572 2.980568 TGTTCTTTCCAACGGCGATAT 58.019 42.857 16.62 0.00 0.00 1.63
8489 9573 2.933906 TGTTCTTTCCAACGGCGATATC 59.066 45.455 16.62 0.00 0.00 1.63
8490 9574 3.195661 GTTCTTTCCAACGGCGATATCT 58.804 45.455 16.62 0.00 0.00 1.98
8491 9575 3.536956 TCTTTCCAACGGCGATATCTT 57.463 42.857 16.62 0.00 0.00 2.40
8492 9576 3.869065 TCTTTCCAACGGCGATATCTTT 58.131 40.909 16.62 0.00 0.00 2.52
8493 9577 4.258543 TCTTTCCAACGGCGATATCTTTT 58.741 39.130 16.62 0.00 0.00 2.27
8494 9578 4.331717 TCTTTCCAACGGCGATATCTTTTC 59.668 41.667 16.62 0.00 0.00 2.29
8495 9579 3.254470 TCCAACGGCGATATCTTTTCA 57.746 42.857 16.62 0.00 0.00 2.69
8496 9580 3.601435 TCCAACGGCGATATCTTTTCAA 58.399 40.909 16.62 0.00 0.00 2.69
8497 9581 3.372822 TCCAACGGCGATATCTTTTCAAC 59.627 43.478 16.62 0.00 0.00 3.18
8498 9582 3.342269 CAACGGCGATATCTTTTCAACG 58.658 45.455 16.62 0.00 0.00 4.10
8499 9583 1.931172 ACGGCGATATCTTTTCAACGG 59.069 47.619 16.62 0.00 0.00 4.44
8500 9584 1.332904 CGGCGATATCTTTTCAACGGC 60.333 52.381 0.00 0.00 41.44 5.68
8518 9602 1.202132 GGCGCGTATCATTTGCTTCAA 60.202 47.619 8.43 0.00 0.00 2.69
8528 9612 0.796312 TTTGCTTCAATCCGACGAGC 59.204 50.000 0.00 0.00 0.00 5.03
8567 9666 1.174712 AAATGTGCTCGCTGCCACTT 61.175 50.000 8.58 0.84 42.00 3.16
8577 9676 1.889105 CTGCCACTTGTCGTGCACT 60.889 57.895 16.19 0.00 42.42 4.40
8579 9678 2.180204 GCCACTTGTCGTGCACTGT 61.180 57.895 16.19 3.08 42.42 3.55
8617 9716 8.854614 ACTGCTCTTAAACTATGACAAATCTT 57.145 30.769 0.00 0.00 0.00 2.40
8636 9735 9.934190 CAAATCTTGAAAAGTTTTTAACATGGG 57.066 29.630 1.64 0.00 41.64 4.00
8638 9737 7.189079 TCTTGAAAAGTTTTTAACATGGGGT 57.811 32.000 1.64 0.00 46.34 4.95
8644 9743 8.951787 AAAAGTTTTTAACATGGGGTAGTTTC 57.048 30.769 0.00 0.00 0.00 2.78
8645 9744 7.663043 AAGTTTTTAACATGGGGTAGTTTCA 57.337 32.000 0.00 0.00 0.00 2.69
8652 9751 5.530176 ACATGGGGTAGTTTCACCTATTT 57.470 39.130 0.00 0.00 38.73 1.40
8670 9769 3.829886 TTTCATAGCTTTCCAACAGCG 57.170 42.857 0.00 0.00 42.55 5.18
8691 9790 0.895530 ATCACACGTCTTGGTCCGAT 59.104 50.000 0.00 0.00 0.00 4.18
8713 9812 7.934594 CGATAAACGGTTTAAAAACTGGATTG 58.065 34.615 16.49 8.40 46.92 2.67
8725 9824 5.784578 AAACTGGATTGAAAACAGTACCC 57.215 39.130 5.72 0.00 44.08 3.69
8726 9825 4.447138 ACTGGATTGAAAACAGTACCCA 57.553 40.909 3.73 0.00 43.13 4.51
8727 9826 4.398319 ACTGGATTGAAAACAGTACCCAG 58.602 43.478 0.00 0.00 43.13 4.45
8729 9828 5.055265 TGGATTGAAAACAGTACCCAGAA 57.945 39.130 0.00 0.00 0.00 3.02
8737 9836 3.525800 ACAGTACCCAGAAAAAGGCAT 57.474 42.857 0.00 0.00 0.00 4.40
8739 9838 3.157087 CAGTACCCAGAAAAAGGCATGT 58.843 45.455 0.00 0.00 0.00 3.21
8740 9839 3.057315 CAGTACCCAGAAAAAGGCATGTG 60.057 47.826 0.00 0.00 0.00 3.21
8743 9842 1.337447 CCCAGAAAAAGGCATGTGCAG 60.337 52.381 7.36 0.00 44.36 4.41
8748 9847 4.025480 CAGAAAAAGGCATGTGCAGTTTTC 60.025 41.667 23.62 23.62 45.50 2.29
8750 9849 4.935352 AAAAGGCATGTGCAGTTTTCTA 57.065 36.364 7.36 0.00 44.36 2.10
8751 9850 5.473066 AAAAGGCATGTGCAGTTTTCTAT 57.527 34.783 7.36 0.00 44.36 1.98
8760 9859 5.053811 TGTGCAGTTTTCTATGACGAGAAA 58.946 37.500 0.00 0.00 42.37 2.52
8763 9862 6.738649 GTGCAGTTTTCTATGACGAGAAATTC 59.261 38.462 0.00 0.00 43.27 2.17
8765 9864 6.738649 GCAGTTTTCTATGACGAGAAATTCAC 59.261 38.462 0.00 0.00 43.27 3.18
8780 9879 8.690680 GAGAAATTCACTCGTCTTAATACTGT 57.309 34.615 0.00 0.00 0.00 3.55
8828 9927 4.549458 GCACTTGCATTGAACATGTAGTT 58.451 39.130 0.00 0.00 41.55 2.24
8842 9941 7.618502 AACATGTAGTTCAAAAGTGTGTGTA 57.381 32.000 0.00 0.00 34.74 2.90
8917 10016 2.643933 GGTAGTTACCACCACTCGTC 57.356 55.000 3.45 0.00 45.73 4.20
8922 10021 4.146745 AGTTACCACCACTCGTCTTTTT 57.853 40.909 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 3.439895 GCTAACTTTAGCGGACTAGCT 57.560 47.619 5.26 0.00 45.65 3.32
24 25 5.539582 TTGTTGTATGCGGCTAACTTTAG 57.460 39.130 0.00 0.00 0.00 1.85
25 26 5.335035 GGTTTGTTGTATGCGGCTAACTTTA 60.335 40.000 0.00 0.00 0.00 1.85
26 27 4.542735 GTTTGTTGTATGCGGCTAACTTT 58.457 39.130 0.00 0.00 0.00 2.66
27 28 3.057806 GGTTTGTTGTATGCGGCTAACTT 60.058 43.478 0.00 0.00 0.00 2.66
28 29 2.486592 GGTTTGTTGTATGCGGCTAACT 59.513 45.455 0.00 0.00 0.00 2.24
29 30 2.226912 TGGTTTGTTGTATGCGGCTAAC 59.773 45.455 0.00 0.00 0.00 2.34
30 31 2.505405 TGGTTTGTTGTATGCGGCTAA 58.495 42.857 0.00 0.00 0.00 3.09
31 32 2.186532 TGGTTTGTTGTATGCGGCTA 57.813 45.000 0.00 0.00 0.00 3.93
32 33 1.269448 CTTGGTTTGTTGTATGCGGCT 59.731 47.619 0.00 0.00 0.00 5.52
33 34 1.000717 ACTTGGTTTGTTGTATGCGGC 60.001 47.619 0.00 0.00 0.00 6.53
34 35 2.664424 CGACTTGGTTTGTTGTATGCGG 60.664 50.000 0.00 0.00 0.00 5.69
35 36 2.570169 CGACTTGGTTTGTTGTATGCG 58.430 47.619 0.00 0.00 0.00 4.73
36 37 2.920647 GCCGACTTGGTTTGTTGTATGC 60.921 50.000 0.00 0.00 41.21 3.14
37 38 2.351350 GGCCGACTTGGTTTGTTGTATG 60.351 50.000 0.00 0.00 41.21 2.39
38 39 1.883926 GGCCGACTTGGTTTGTTGTAT 59.116 47.619 0.00 0.00 41.21 2.29
39 40 1.310904 GGCCGACTTGGTTTGTTGTA 58.689 50.000 0.00 0.00 41.21 2.41
40 41 1.720694 CGGCCGACTTGGTTTGTTGT 61.721 55.000 24.07 0.00 41.21 3.32
41 42 1.008995 CGGCCGACTTGGTTTGTTG 60.009 57.895 24.07 0.00 41.21 3.33
42 43 2.190841 CCGGCCGACTTGGTTTGTT 61.191 57.895 30.73 0.00 41.21 2.83
43 44 2.593436 CCGGCCGACTTGGTTTGT 60.593 61.111 30.73 0.00 41.21 2.83
44 45 2.281208 TCCGGCCGACTTGGTTTG 60.281 61.111 30.73 6.27 41.21 2.93
45 46 1.838073 ATCTCCGGCCGACTTGGTTT 61.838 55.000 30.73 0.00 41.21 3.27
46 47 1.838073 AATCTCCGGCCGACTTGGTT 61.838 55.000 30.73 12.86 41.21 3.67
47 48 0.974010 TAATCTCCGGCCGACTTGGT 60.974 55.000 30.73 9.66 41.21 3.67
48 49 0.393077 ATAATCTCCGGCCGACTTGG 59.607 55.000 30.73 9.82 42.50 3.61
49 50 2.240493 AATAATCTCCGGCCGACTTG 57.760 50.000 30.73 10.28 0.00 3.16
50 51 2.288886 GCTAATAATCTCCGGCCGACTT 60.289 50.000 30.73 16.02 0.00 3.01
51 52 1.272769 GCTAATAATCTCCGGCCGACT 59.727 52.381 30.73 8.22 0.00 4.18
52 53 1.000506 TGCTAATAATCTCCGGCCGAC 59.999 52.381 30.73 1.13 0.00 4.79
53 54 1.000506 GTGCTAATAATCTCCGGCCGA 59.999 52.381 30.73 12.25 0.00 5.54
54 55 1.429463 GTGCTAATAATCTCCGGCCG 58.571 55.000 21.04 21.04 0.00 6.13
55 56 1.270147 ACGTGCTAATAATCTCCGGCC 60.270 52.381 0.00 0.00 0.00 6.13
56 57 2.150397 ACGTGCTAATAATCTCCGGC 57.850 50.000 0.00 0.00 0.00 6.13
57 58 4.500603 AGTACGTGCTAATAATCTCCGG 57.499 45.455 3.62 0.00 0.00 5.14
58 59 6.238610 ACTAGTACGTGCTAATAATCTCCG 57.761 41.667 14.47 2.51 0.00 4.63
59 60 9.165035 AGATACTAGTACGTGCTAATAATCTCC 57.835 37.037 14.47 0.00 0.00 3.71
105 106 9.251440 GAAAAGACCTTTTTACCCCTATATTGT 57.749 33.333 8.88 0.00 42.26 2.71
106 107 9.250246 TGAAAAGACCTTTTTACCCCTATATTG 57.750 33.333 8.88 0.00 42.26 1.90
110 111 9.421399 CATATGAAAAGACCTTTTTACCCCTAT 57.579 33.333 8.88 0.00 42.26 2.57
111 112 8.395605 ACATATGAAAAGACCTTTTTACCCCTA 58.604 33.333 10.38 0.00 42.26 3.53
112 113 7.246027 ACATATGAAAAGACCTTTTTACCCCT 58.754 34.615 10.38 0.00 42.26 4.79
113 114 7.177744 TGACATATGAAAAGACCTTTTTACCCC 59.822 37.037 10.38 0.00 42.26 4.95
114 115 8.117813 TGACATATGAAAAGACCTTTTTACCC 57.882 34.615 10.38 0.00 42.26 3.69
122 123 8.739972 GGTGTTAATTGACATATGAAAAGACCT 58.260 33.333 10.38 0.00 0.00 3.85
123 124 8.739972 AGGTGTTAATTGACATATGAAAAGACC 58.260 33.333 10.38 10.92 31.21 3.85
130 131 8.243426 GCTTTGAAGGTGTTAATTGACATATGA 58.757 33.333 10.38 0.00 0.00 2.15
131 132 8.246180 AGCTTTGAAGGTGTTAATTGACATATG 58.754 33.333 6.31 0.00 35.05 1.78
132 133 8.353423 AGCTTTGAAGGTGTTAATTGACATAT 57.647 30.769 6.31 0.00 35.05 1.78
133 134 7.759489 AGCTTTGAAGGTGTTAATTGACATA 57.241 32.000 6.31 0.00 35.05 2.29
134 135 6.655078 AGCTTTGAAGGTGTTAATTGACAT 57.345 33.333 6.31 0.00 35.05 3.06
135 136 6.463995 AAGCTTTGAAGGTGTTAATTGACA 57.536 33.333 0.00 0.00 36.76 3.58
136 137 8.865590 TTTAAGCTTTGAAGGTGTTAATTGAC 57.134 30.769 3.20 0.00 36.76 3.18
142 143 8.500773 CGTCTATTTTAAGCTTTGAAGGTGTTA 58.499 33.333 3.20 0.00 36.76 2.41
143 144 7.227910 TCGTCTATTTTAAGCTTTGAAGGTGTT 59.772 33.333 3.20 0.00 36.76 3.32
144 145 6.708949 TCGTCTATTTTAAGCTTTGAAGGTGT 59.291 34.615 3.20 0.00 36.76 4.16
145 146 7.117812 TCTCGTCTATTTTAAGCTTTGAAGGTG 59.882 37.037 3.20 0.00 36.76 4.00
146 147 7.159372 TCTCGTCTATTTTAAGCTTTGAAGGT 58.841 34.615 3.20 0.00 38.62 3.50
147 148 7.332182 ACTCTCGTCTATTTTAAGCTTTGAAGG 59.668 37.037 3.20 0.00 0.00 3.46
148 149 8.165428 CACTCTCGTCTATTTTAAGCTTTGAAG 58.835 37.037 3.20 0.00 0.00 3.02
149 150 7.656137 ACACTCTCGTCTATTTTAAGCTTTGAA 59.344 33.333 3.20 0.00 0.00 2.69
150 151 7.152645 ACACTCTCGTCTATTTTAAGCTTTGA 58.847 34.615 3.20 0.00 0.00 2.69
151 152 7.352719 ACACTCTCGTCTATTTTAAGCTTTG 57.647 36.000 3.20 0.00 0.00 2.77
152 153 7.964604 AACACTCTCGTCTATTTTAAGCTTT 57.035 32.000 3.20 0.00 0.00 3.51
159 160 7.494952 GCCCTTTATAACACTCTCGTCTATTTT 59.505 37.037 0.00 0.00 0.00 1.82
160 161 6.985059 GCCCTTTATAACACTCTCGTCTATTT 59.015 38.462 0.00 0.00 0.00 1.40
161 162 6.097839 TGCCCTTTATAACACTCTCGTCTATT 59.902 38.462 0.00 0.00 0.00 1.73
162 163 5.597182 TGCCCTTTATAACACTCTCGTCTAT 59.403 40.000 0.00 0.00 0.00 1.98
163 164 4.951715 TGCCCTTTATAACACTCTCGTCTA 59.048 41.667 0.00 0.00 0.00 2.59
164 165 3.767673 TGCCCTTTATAACACTCTCGTCT 59.232 43.478 0.00 0.00 0.00 4.18
165 166 4.119442 TGCCCTTTATAACACTCTCGTC 57.881 45.455 0.00 0.00 0.00 4.20
166 167 4.755266 ATGCCCTTTATAACACTCTCGT 57.245 40.909 0.00 0.00 0.00 4.18
167 168 7.548196 TTTTATGCCCTTTATAACACTCTCG 57.452 36.000 0.00 0.00 0.00 4.04
177 178 9.255029 ACTGTGTCTAAATTTTATGCCCTTTAT 57.745 29.630 0.00 0.00 0.00 1.40
178 179 8.519526 CACTGTGTCTAAATTTTATGCCCTTTA 58.480 33.333 0.00 0.00 0.00 1.85
179 180 7.015195 ACACTGTGTCTAAATTTTATGCCCTTT 59.985 33.333 7.80 0.00 0.00 3.11
180 181 6.493458 ACACTGTGTCTAAATTTTATGCCCTT 59.507 34.615 7.80 0.00 0.00 3.95
181 182 6.010219 ACACTGTGTCTAAATTTTATGCCCT 58.990 36.000 7.80 0.00 0.00 5.19
182 183 6.267496 ACACTGTGTCTAAATTTTATGCCC 57.733 37.500 7.80 0.00 0.00 5.36
210 211 9.069082 TGACACCGAAAAATATTTTCTTTCCTA 57.931 29.630 13.68 0.00 0.00 2.94
211 212 7.947282 TGACACCGAAAAATATTTTCTTTCCT 58.053 30.769 13.68 0.00 0.00 3.36
212 213 8.582433 TTGACACCGAAAAATATTTTCTTTCC 57.418 30.769 13.68 2.41 0.00 3.13
216 217 9.855021 CCTATTTGACACCGAAAAATATTTTCT 57.145 29.630 13.68 4.88 0.00 2.52
217 218 9.083080 CCCTATTTGACACCGAAAAATATTTTC 57.917 33.333 13.68 7.01 0.00 2.29
218 219 8.808092 TCCCTATTTGACACCGAAAAATATTTT 58.192 29.630 7.64 7.64 0.00 1.82
219 220 8.356000 TCCCTATTTGACACCGAAAAATATTT 57.644 30.769 0.00 0.00 0.00 1.40
220 221 7.948034 TCCCTATTTGACACCGAAAAATATT 57.052 32.000 0.00 0.00 0.00 1.28
221 222 7.948034 TTCCCTATTTGACACCGAAAAATAT 57.052 32.000 0.00 0.00 0.00 1.28
222 223 7.230913 TGTTTCCCTATTTGACACCGAAAAATA 59.769 33.333 0.00 0.00 0.00 1.40
223 224 6.041069 TGTTTCCCTATTTGACACCGAAAAAT 59.959 34.615 0.00 0.00 0.00 1.82
224 225 5.360144 TGTTTCCCTATTTGACACCGAAAAA 59.640 36.000 0.00 0.00 0.00 1.94
225 226 4.888239 TGTTTCCCTATTTGACACCGAAAA 59.112 37.500 0.00 0.00 0.00 2.29
226 227 4.462133 TGTTTCCCTATTTGACACCGAAA 58.538 39.130 0.00 0.00 0.00 3.46
227 228 4.088056 TGTTTCCCTATTTGACACCGAA 57.912 40.909 0.00 0.00 0.00 4.30
228 229 3.773418 TGTTTCCCTATTTGACACCGA 57.227 42.857 0.00 0.00 0.00 4.69
229 230 4.839668 TTTGTTTCCCTATTTGACACCG 57.160 40.909 0.00 0.00 0.00 4.94
230 231 9.549078 TTAAATTTTGTTTCCCTATTTGACACC 57.451 29.630 0.00 0.00 0.00 4.16
234 235 9.549078 GGTGTTAAATTTTGTTTCCCTATTTGA 57.451 29.630 0.00 0.00 0.00 2.69
235 236 8.491950 CGGTGTTAAATTTTGTTTCCCTATTTG 58.508 33.333 0.00 0.00 0.00 2.32
236 237 8.205512 ACGGTGTTAAATTTTGTTTCCCTATTT 58.794 29.630 0.00 0.00 0.00 1.40
237 238 7.654116 CACGGTGTTAAATTTTGTTTCCCTATT 59.346 33.333 0.00 0.00 0.00 1.73
238 239 7.149307 CACGGTGTTAAATTTTGTTTCCCTAT 58.851 34.615 0.00 0.00 0.00 2.57
239 240 6.096564 ACACGGTGTTAAATTTTGTTTCCCTA 59.903 34.615 8.21 0.00 0.00 3.53
240 241 5.105269 ACACGGTGTTAAATTTTGTTTCCCT 60.105 36.000 8.21 0.00 0.00 4.20
241 242 5.110598 ACACGGTGTTAAATTTTGTTTCCC 58.889 37.500 8.21 0.00 0.00 3.97
242 243 6.650239 AACACGGTGTTAAATTTTGTTTCC 57.350 33.333 24.02 0.00 39.09 3.13
254 255 8.851541 AGAATTCCTTATTTAACACGGTGTTA 57.148 30.769 25.48 25.48 41.45 2.41
255 256 7.664318 AGAGAATTCCTTATTTAACACGGTGTT 59.336 33.333 27.50 27.50 43.88 3.32
256 257 7.166167 AGAGAATTCCTTATTTAACACGGTGT 58.834 34.615 8.21 8.21 0.00 4.16
257 258 7.611213 AGAGAATTCCTTATTTAACACGGTG 57.389 36.000 6.58 6.58 0.00 4.94
258 259 9.729281 TTAAGAGAATTCCTTATTTAACACGGT 57.271 29.630 13.70 0.00 0.00 4.83
270 271 8.585881 GCCCTTTACTTTTTAAGAGAATTCCTT 58.414 33.333 0.65 7.97 0.00 3.36
271 272 7.094334 CGCCCTTTACTTTTTAAGAGAATTCCT 60.094 37.037 0.65 0.00 0.00 3.36
272 273 7.027760 CGCCCTTTACTTTTTAAGAGAATTCC 58.972 38.462 0.65 0.00 0.00 3.01
273 274 6.527023 GCGCCCTTTACTTTTTAAGAGAATTC 59.473 38.462 0.00 0.00 0.00 2.17
274 275 6.387465 GCGCCCTTTACTTTTTAAGAGAATT 58.613 36.000 0.00 0.00 0.00 2.17
275 276 5.391629 CGCGCCCTTTACTTTTTAAGAGAAT 60.392 40.000 0.00 0.00 0.00 2.40
276 277 4.083696 CGCGCCCTTTACTTTTTAAGAGAA 60.084 41.667 0.00 0.00 0.00 2.87
277 278 3.434299 CGCGCCCTTTACTTTTTAAGAGA 59.566 43.478 0.00 0.00 0.00 3.10
278 279 3.743886 CGCGCCCTTTACTTTTTAAGAG 58.256 45.455 0.00 0.00 0.00 2.85
279 280 2.095617 GCGCGCCCTTTACTTTTTAAGA 60.096 45.455 23.24 0.00 0.00 2.10
280 281 2.095415 AGCGCGCCCTTTACTTTTTAAG 60.095 45.455 30.33 0.00 0.00 1.85
281 282 1.881324 AGCGCGCCCTTTACTTTTTAA 59.119 42.857 30.33 0.00 0.00 1.52
282 283 1.198178 CAGCGCGCCCTTTACTTTTTA 59.802 47.619 30.33 0.00 0.00 1.52
283 284 0.039527 CAGCGCGCCCTTTACTTTTT 60.040 50.000 30.33 0.13 0.00 1.94
284 285 0.887387 TCAGCGCGCCCTTTACTTTT 60.887 50.000 30.33 0.79 0.00 2.27
435 437 4.544152 AGAGGGAAGAGAGGATATAGGGAG 59.456 50.000 0.00 0.00 0.00 4.30
560 572 1.696097 ATTCGACCGAATGGAGGGGG 61.696 60.000 15.75 0.00 42.55 5.40
690 702 2.594303 CAACAAGCCGGTCCAGCA 60.594 61.111 1.90 0.00 0.00 4.41
692 704 2.260869 CCACAACAAGCCGGTCCAG 61.261 63.158 1.90 0.00 0.00 3.86
865 877 9.806203 CTTGCAACAAATTATTCATGATTCCTA 57.194 29.630 0.00 0.00 0.00 2.94
897 909 2.967887 AGTAGTTACCTCAACACCCGTT 59.032 45.455 0.00 0.00 39.81 4.44
898 910 2.298163 CAGTAGTTACCTCAACACCCGT 59.702 50.000 0.00 0.00 39.81 5.28
922 934 6.544038 GCATTGGCCATAATAACAAATTCC 57.456 37.500 6.09 0.00 0.00 3.01
1191 1203 4.824166 GCAGCCATCGCAAGCGTG 62.824 66.667 14.57 11.37 40.74 5.34
1341 1353 2.391130 AACCCAACTCCCACTGCCA 61.391 57.895 0.00 0.00 0.00 4.92
1508 1524 4.650754 ACATCGTAGGTGCCTTAACTAG 57.349 45.455 0.00 0.00 0.00 2.57
1511 1527 3.493503 GCATACATCGTAGGTGCCTTAAC 59.506 47.826 0.00 0.00 0.00 2.01
1524 1540 4.495911 TCTTGAGCTAGAGCATACATCG 57.504 45.455 4.01 0.00 45.16 3.84
1717 1733 8.141268 TGTTTAATTCTTTCACTGAAACATCCC 58.859 33.333 0.00 0.00 32.12 3.85
1781 1797 2.704572 GCAGACTAATGTGTTCTGCCT 58.295 47.619 11.00 0.00 45.53 4.75
1808 1824 6.204301 CACAATGCCCACATAAACAAATTTCA 59.796 34.615 0.00 0.00 34.62 2.69
1866 2231 6.739331 TTTGTCCACCAAACTGGAATAAAT 57.261 33.333 0.00 0.00 42.22 1.40
1929 2294 3.609409 CGACAGAAACATCAGACGAGACA 60.609 47.826 0.00 0.00 0.00 3.41
1979 2344 0.248866 CGAACTGTGTGGCCAAAACC 60.249 55.000 7.24 0.00 0.00 3.27
2034 2399 4.314440 GGCGAGTGAGCACCACCA 62.314 66.667 5.75 0.00 46.87 4.17
2075 2440 6.189859 TCATCAGCTGGTTCAAGGAAAATAT 58.810 36.000 15.13 0.00 0.00 1.28
2094 2459 0.177836 ATGCCGACGGATGTTCATCA 59.822 50.000 20.50 3.24 0.00 3.07
2126 2491 2.221055 GCTCAACGTTGACGAAACAGAT 59.779 45.455 26.53 0.00 43.02 2.90
2129 2494 1.360820 TGCTCAACGTTGACGAAACA 58.639 45.000 26.53 15.88 43.02 2.83
2310 2675 3.012502 TGGGACAGAGGGAGTAGTTACAT 59.987 47.826 0.00 0.00 0.00 2.29
2328 2693 8.726988 GCATAAAAACGCTCTTATATTATGGGA 58.273 33.333 0.00 0.00 32.58 4.37
2329 2694 8.730680 AGCATAAAAACGCTCTTATATTATGGG 58.269 33.333 0.00 0.00 31.16 4.00
2338 2703 9.459640 CACTAGTATAGCATAAAAACGCTCTTA 57.540 33.333 0.00 0.00 44.39 2.10
2339 2704 7.980099 ACACTAGTATAGCATAAAAACGCTCTT 59.020 33.333 0.00 0.00 44.39 2.85
2340 2705 7.490000 ACACTAGTATAGCATAAAAACGCTCT 58.510 34.615 0.00 0.00 44.39 4.09
2341 2706 7.695869 ACACTAGTATAGCATAAAAACGCTC 57.304 36.000 0.00 0.00 44.39 5.03
2342 2707 9.590451 TTAACACTAGTATAGCATAAAAACGCT 57.410 29.630 0.00 0.00 44.39 5.07
2351 2716 9.649167 AGAACGTTTTTAACACTAGTATAGCAT 57.351 29.630 0.46 0.00 44.39 3.79
2352 2717 9.480053 AAGAACGTTTTTAACACTAGTATAGCA 57.520 29.630 0.46 0.00 44.39 3.49
2369 2734 9.751542 CCTCTGTCTCATAATATAAGAACGTTT 57.248 33.333 0.46 0.00 0.00 3.60
2370 2735 8.361139 CCCTCTGTCTCATAATATAAGAACGTT 58.639 37.037 0.00 0.00 0.00 3.99
2371 2736 7.724506 TCCCTCTGTCTCATAATATAAGAACGT 59.275 37.037 0.00 0.00 0.00 3.99
2372 2737 8.112016 TCCCTCTGTCTCATAATATAAGAACG 57.888 38.462 0.00 0.00 0.00 3.95
2373 2738 9.084533 ACTCCCTCTGTCTCATAATATAAGAAC 57.915 37.037 0.00 0.00 0.00 3.01
2375 2740 9.742144 GTACTCCCTCTGTCTCATAATATAAGA 57.258 37.037 0.00 0.00 0.00 2.10
2376 2741 9.521841 TGTACTCCCTCTGTCTCATAATATAAG 57.478 37.037 0.00 0.00 0.00 1.73
2377 2742 9.877222 TTGTACTCCCTCTGTCTCATAATATAA 57.123 33.333 0.00 0.00 0.00 0.98
2378 2743 9.521841 CTTGTACTCCCTCTGTCTCATAATATA 57.478 37.037 0.00 0.00 0.00 0.86
2379 2744 8.007742 ACTTGTACTCCCTCTGTCTCATAATAT 58.992 37.037 0.00 0.00 0.00 1.28
2380 2745 7.355101 ACTTGTACTCCCTCTGTCTCATAATA 58.645 38.462 0.00 0.00 0.00 0.98
2381 2746 6.198639 ACTTGTACTCCCTCTGTCTCATAAT 58.801 40.000 0.00 0.00 0.00 1.28
2382 2747 5.580998 ACTTGTACTCCCTCTGTCTCATAA 58.419 41.667 0.00 0.00 0.00 1.90
2383 2748 5.044772 AGACTTGTACTCCCTCTGTCTCATA 60.045 44.000 0.00 0.00 0.00 2.15
2384 2749 4.020543 GACTTGTACTCCCTCTGTCTCAT 58.979 47.826 0.00 0.00 0.00 2.90
2385 2750 3.074687 AGACTTGTACTCCCTCTGTCTCA 59.925 47.826 0.00 0.00 0.00 3.27
2386 2751 3.692690 AGACTTGTACTCCCTCTGTCTC 58.307 50.000 0.00 0.00 0.00 3.36
2387 2752 3.818295 AGACTTGTACTCCCTCTGTCT 57.182 47.619 0.00 0.00 0.00 3.41
2388 2753 4.156373 GTGTAGACTTGTACTCCCTCTGTC 59.844 50.000 0.00 0.00 0.00 3.51
2389 2754 4.080687 GTGTAGACTTGTACTCCCTCTGT 58.919 47.826 0.00 0.00 0.00 3.41
2390 2755 4.337145 AGTGTAGACTTGTACTCCCTCTG 58.663 47.826 0.00 0.00 0.00 3.35
2391 2756 4.290196 AGAGTGTAGACTTGTACTCCCTCT 59.710 45.833 0.00 0.00 40.21 3.69
2392 2757 4.591929 AGAGTGTAGACTTGTACTCCCTC 58.408 47.826 0.00 0.00 40.21 4.30
2393 2758 4.661247 AGAGTGTAGACTTGTACTCCCT 57.339 45.455 0.00 0.00 40.21 4.20
2394 2759 5.251764 TGTAGAGTGTAGACTTGTACTCCC 58.748 45.833 12.11 0.00 40.21 4.30
2395 2760 6.430616 AGTTGTAGAGTGTAGACTTGTACTCC 59.569 42.308 12.11 5.58 40.21 3.85
2396 2761 7.437793 AGTTGTAGAGTGTAGACTTGTACTC 57.562 40.000 12.11 0.00 39.77 2.59
2397 2762 7.255520 CCAAGTTGTAGAGTGTAGACTTGTACT 60.256 40.741 16.14 1.16 41.25 2.73
2398 2763 6.862090 CCAAGTTGTAGAGTGTAGACTTGTAC 59.138 42.308 16.14 0.66 41.25 2.90
2399 2764 6.548622 ACCAAGTTGTAGAGTGTAGACTTGTA 59.451 38.462 16.14 0.00 41.25 2.41
2400 2765 5.363005 ACCAAGTTGTAGAGTGTAGACTTGT 59.637 40.000 16.14 7.28 41.25 3.16
2401 2766 5.844004 ACCAAGTTGTAGAGTGTAGACTTG 58.156 41.667 12.87 12.87 42.03 3.16
2402 2767 6.776603 AGTACCAAGTTGTAGAGTGTAGACTT 59.223 38.462 1.45 0.00 30.16 3.01
2403 2768 6.207025 CAGTACCAAGTTGTAGAGTGTAGACT 59.793 42.308 1.45 0.00 33.98 3.24
2404 2769 6.016443 ACAGTACCAAGTTGTAGAGTGTAGAC 60.016 42.308 1.45 0.00 0.00 2.59
2405 2770 6.066690 ACAGTACCAAGTTGTAGAGTGTAGA 58.933 40.000 1.45 0.00 0.00 2.59
2406 2771 6.328641 ACAGTACCAAGTTGTAGAGTGTAG 57.671 41.667 1.45 0.00 0.00 2.74
2407 2772 6.513884 CGAACAGTACCAAGTTGTAGAGTGTA 60.514 42.308 1.45 0.00 0.00 2.90
2408 2773 5.598769 GAACAGTACCAAGTTGTAGAGTGT 58.401 41.667 1.45 3.26 0.00 3.55
2409 2774 4.680110 CGAACAGTACCAAGTTGTAGAGTG 59.320 45.833 1.45 2.67 0.00 3.51
2410 2775 4.340381 ACGAACAGTACCAAGTTGTAGAGT 59.660 41.667 1.45 0.00 0.00 3.24
2411 2776 4.680110 CACGAACAGTACCAAGTTGTAGAG 59.320 45.833 1.45 0.00 0.00 2.43
2598 2976 0.823356 TGGCTCTTTGTGGGCAACTC 60.823 55.000 0.00 0.00 35.13 3.01
2727 3105 4.140536 GCCTACACGAGGGTAGTTACTAT 58.859 47.826 11.13 0.00 46.81 2.12
2861 3239 8.514594 CAAGTTTATTCTAGTGGCAATTCAGAA 58.485 33.333 2.99 2.99 0.00 3.02
3003 3381 5.808042 AGAATCTGTGATCAACGAAATGG 57.192 39.130 0.00 0.00 0.00 3.16
3496 3874 9.708222 CGGTTAACAATCTCAATAAGAATGAAG 57.292 33.333 8.10 0.00 37.11 3.02
3497 3875 9.226606 ACGGTTAACAATCTCAATAAGAATGAA 57.773 29.630 8.10 0.00 37.11 2.57
3601 3979 0.700564 AGAAGAAATGGAGCAGCCCA 59.299 50.000 5.20 5.20 41.05 5.36
3859 4237 1.601171 CTCTTGCAGAGTGGGGAGG 59.399 63.158 5.34 0.00 37.57 4.30
4064 4449 3.053693 CCATTCCATACAAGGGGAAGACA 60.054 47.826 0.00 0.00 45.70 3.41
4273 4659 4.073293 TGAAGAACTTGAGGACCTTGAC 57.927 45.455 0.00 0.00 0.00 3.18
4458 4844 2.026915 TCATCATGTGTTAGCAGCCTGT 60.027 45.455 0.00 0.00 0.00 4.00
4543 4929 2.040939 GGAGTTTCCCCTAGGTCTAGC 58.959 57.143 8.29 0.00 31.95 3.42
4688 5074 3.128349 GTTATGCACATACCTACCCACG 58.872 50.000 0.00 0.00 0.00 4.94
4842 5794 2.095314 TGATGTACATTGTTGGCTTGCG 60.095 45.455 10.30 0.00 0.00 4.85
4905 5858 4.446385 GCATACACGTTGTGTTAGTCTTGA 59.554 41.667 8.00 0.00 45.08 3.02
4950 5903 6.320926 TGAAACTTGATTTGTGTGGATGAAGA 59.679 34.615 0.00 0.00 0.00 2.87
5256 6216 3.186283 TCTAAGTTTAGACCCATGCCCA 58.814 45.455 0.00 0.00 34.99 5.36
5363 6323 1.004745 CTAGGTGACCTGGCAATTGGT 59.995 52.381 15.83 0.00 39.60 3.67
5469 6429 5.308825 CCAAACTAGAGAAGAACACATGGT 58.691 41.667 0.00 0.00 0.00 3.55
5472 6432 4.327680 GGCCAAACTAGAGAAGAACACAT 58.672 43.478 0.00 0.00 0.00 3.21
5483 6443 1.544724 GTTGCATGGGCCAAACTAGA 58.455 50.000 11.89 0.00 40.13 2.43
5500 6460 2.878406 CCAAGAGTTGATGAACGTGGTT 59.122 45.455 7.11 0.00 37.15 3.67
5556 6526 1.202758 TGGTGCACGAAAATGAGTCCT 60.203 47.619 11.45 0.00 0.00 3.85
5601 6571 0.936297 CAACAGTGCTTGCGGCTTTC 60.936 55.000 0.00 0.00 42.39 2.62
5752 6722 3.545703 CTGGACCTTCAAGTTTGAGTGT 58.454 45.455 0.00 0.00 38.61 3.55
5778 6748 3.735514 GCTCGGGAGTACAGATGAACTTC 60.736 52.174 0.00 0.00 0.00 3.01
5811 6781 7.619512 TTAAATGAGGGTTTTTAATGTGGGT 57.380 32.000 0.00 0.00 0.00 4.51
6009 6980 4.062293 TGGTGCATGTCAACTGTACTTAC 58.938 43.478 6.71 0.00 32.28 2.34
6036 7007 7.451501 TTTATGATTCATGAGAGTGTGCAAA 57.548 32.000 9.46 0.00 0.00 3.68
6190 7161 6.000219 AGTATGACATGACAAAGAAAGCACT 59.000 36.000 0.00 0.00 0.00 4.40
6286 7257 4.395959 TTTTGAGTCACAGACGGTTACT 57.604 40.909 0.00 0.00 36.67 2.24
6320 7293 5.693769 TTGTCAATTAGGTTAGGGAGGAG 57.306 43.478 0.00 0.00 0.00 3.69
6379 7354 7.484641 CGTTTCCACACAAGTCCATTATAAATG 59.515 37.037 0.00 0.00 0.00 2.32
6390 7365 1.527311 GAGCTCGTTTCCACACAAGTC 59.473 52.381 0.00 0.00 0.00 3.01
6397 7372 2.548057 TGTTTGATGAGCTCGTTTCCAC 59.452 45.455 10.42 5.81 0.00 4.02
6398 7373 2.844946 TGTTTGATGAGCTCGTTTCCA 58.155 42.857 10.42 0.39 0.00 3.53
6499 7474 9.019656 AGTACAGAATTTATTTGTACAATGCCA 57.980 29.630 9.56 0.00 45.92 4.92
6554 7554 1.374560 AGTTGCACGTGTAAACAGCA 58.625 45.000 27.01 13.13 0.00 4.41
6616 7616 3.980123 TCAACTTTGAAAGCTGTTGCAGC 60.980 43.478 12.68 12.68 44.88 5.25
6870 7883 4.494484 GGAGCAAAACAACAACTTCAGTT 58.506 39.130 0.00 0.00 39.12 3.16
6888 7901 0.673437 CTCAGAGATCCTTCCGGAGC 59.327 60.000 3.34 0.00 46.14 4.70
6889 7902 2.065899 ACTCAGAGATCCTTCCGGAG 57.934 55.000 3.34 0.00 44.06 4.63
6891 7904 4.586841 AGAAATACTCAGAGATCCTTCCGG 59.413 45.833 3.79 0.00 0.00 5.14
6892 7905 5.068460 ACAGAAATACTCAGAGATCCTTCCG 59.932 44.000 3.79 0.00 0.00 4.30
6894 7907 6.872920 ACACAGAAATACTCAGAGATCCTTC 58.127 40.000 3.79 1.80 0.00 3.46
6895 7908 6.865834 ACACAGAAATACTCAGAGATCCTT 57.134 37.500 3.79 0.00 0.00 3.36
6896 7909 6.865834 AACACAGAAATACTCAGAGATCCT 57.134 37.500 3.79 0.00 0.00 3.24
6897 7910 7.548097 TGTAACACAGAAATACTCAGAGATCC 58.452 38.462 3.79 0.00 0.00 3.36
6898 7911 9.029243 CATGTAACACAGAAATACTCAGAGATC 57.971 37.037 3.79 0.00 0.00 2.75
6899 7912 7.493971 GCATGTAACACAGAAATACTCAGAGAT 59.506 37.037 3.79 0.00 0.00 2.75
6900 7913 6.813649 GCATGTAACACAGAAATACTCAGAGA 59.186 38.462 3.79 0.00 0.00 3.10
6901 7914 6.591448 TGCATGTAACACAGAAATACTCAGAG 59.409 38.462 0.00 0.00 0.00 3.35
7080 8099 4.216902 TCAGAACAAATCAACAGCATCAGG 59.783 41.667 0.00 0.00 0.00 3.86
8116 9135 7.255486 GCCAAGGGATATTACACCTAAATGAAC 60.255 40.741 0.00 0.00 33.37 3.18
8274 9313 6.768029 TTGCAAGCACTCAAAATATTTGAC 57.232 33.333 0.39 0.00 0.00 3.18
8275 9314 6.985645 ACTTTGCAAGCACTCAAAATATTTGA 59.014 30.769 0.39 5.50 32.55 2.69
8281 9321 5.412286 ACAAAACTTTGCAAGCACTCAAAAT 59.588 32.000 0.00 0.00 41.79 1.82
8318 9358 7.627088 GAATGTCATTCCGTGATGAAACTTCAT 60.627 37.037 13.74 4.61 40.59 2.57
8319 9359 4.384940 TGTCATTCCGTGATGAAACTTCA 58.615 39.130 0.00 0.00 39.48 3.02
8320 9360 5.551760 ATGTCATTCCGTGATGAAACTTC 57.448 39.130 0.15 0.00 39.48 3.01
8321 9361 5.473162 TGAATGTCATTCCGTGATGAAACTT 59.527 36.000 20.41 0.00 39.48 2.66
8322 9362 5.003160 TGAATGTCATTCCGTGATGAAACT 58.997 37.500 20.41 0.00 39.48 2.66
8323 9363 5.295431 TGAATGTCATTCCGTGATGAAAC 57.705 39.130 20.41 0.00 39.48 2.78
8324 9364 5.704978 TCTTGAATGTCATTCCGTGATGAAA 59.295 36.000 20.41 6.77 39.48 2.69
8325 9365 5.244755 TCTTGAATGTCATTCCGTGATGAA 58.755 37.500 20.41 7.39 39.48 2.57
8326 9366 4.831107 TCTTGAATGTCATTCCGTGATGA 58.169 39.130 20.41 8.52 39.48 2.92
8327 9367 5.550232 TTCTTGAATGTCATTCCGTGATG 57.450 39.130 20.41 6.63 39.48 3.07
8328 9368 5.392380 GCTTTCTTGAATGTCATTCCGTGAT 60.392 40.000 20.41 0.00 39.48 3.06
8329 9369 4.083324 GCTTTCTTGAATGTCATTCCGTGA 60.083 41.667 20.41 13.34 38.50 4.35
8330 9370 4.083110 AGCTTTCTTGAATGTCATTCCGTG 60.083 41.667 20.41 11.58 38.50 4.94
8331 9371 4.074970 AGCTTTCTTGAATGTCATTCCGT 58.925 39.130 20.41 0.00 38.50 4.69
8332 9372 4.154737 TGAGCTTTCTTGAATGTCATTCCG 59.845 41.667 20.41 12.66 38.50 4.30
8333 9373 5.633830 TGAGCTTTCTTGAATGTCATTCC 57.366 39.130 20.41 5.57 38.50 3.01
8334 9374 6.849502 TCATGAGCTTTCTTGAATGTCATTC 58.150 36.000 17.21 17.21 39.70 2.67
8335 9375 6.829229 TCATGAGCTTTCTTGAATGTCATT 57.171 33.333 0.00 0.00 0.00 2.57
8336 9376 6.829229 TTCATGAGCTTTCTTGAATGTCAT 57.171 33.333 0.00 0.00 31.61 3.06
8337 9377 6.617879 CATTCATGAGCTTTCTTGAATGTCA 58.382 36.000 23.09 2.51 46.18 3.58
8341 9381 6.829229 TGACATTCATGAGCTTTCTTGAAT 57.171 33.333 9.84 9.84 41.86 2.57
8342 9382 6.829229 ATGACATTCATGAGCTTTCTTGAA 57.171 33.333 0.00 6.71 35.43 2.69
8343 9383 6.829229 AATGACATTCATGAGCTTTCTTGA 57.171 33.333 0.00 0.00 37.15 3.02
8344 9384 7.884816 AAAATGACATTCATGAGCTTTCTTG 57.115 32.000 0.05 0.00 37.15 3.02
8387 9471 7.012358 GTGATGAATCTCGAAAAGTTTCTGAC 58.988 38.462 2.53 0.00 35.55 3.51
8391 9475 6.892691 ACAGTGATGAATCTCGAAAAGTTTC 58.107 36.000 0.00 0.00 35.23 2.78
8422 9506 4.260538 GCGCCACACAATTTTCAAAATTGA 60.261 37.500 32.86 0.00 39.36 2.57
8440 9524 2.825387 GCCACTCATCATGCGCCA 60.825 61.111 4.18 0.00 0.00 5.69
8460 9544 2.734606 CGTTGGAAAGAACATACGCTCA 59.265 45.455 0.00 0.00 0.00 4.26
8469 9553 3.195661 AGATATCGCCGTTGGAAAGAAC 58.804 45.455 0.00 0.00 0.00 3.01
8482 9566 1.915965 GCGCCGTTGAAAAGATATCGC 60.916 52.381 0.00 0.00 0.00 4.58
8483 9567 1.653679 CGCGCCGTTGAAAAGATATCG 60.654 52.381 0.00 0.00 0.00 2.92
8484 9568 1.326548 ACGCGCCGTTGAAAAGATATC 59.673 47.619 5.73 0.00 36.35 1.63
8485 9569 1.365699 ACGCGCCGTTGAAAAGATAT 58.634 45.000 5.73 0.00 36.35 1.63
8486 9570 1.993542 TACGCGCCGTTGAAAAGATA 58.006 45.000 5.73 0.00 41.54 1.98
8487 9571 1.326548 GATACGCGCCGTTGAAAAGAT 59.673 47.619 5.73 0.00 41.54 2.40
8488 9572 0.717224 GATACGCGCCGTTGAAAAGA 59.283 50.000 5.73 0.00 41.54 2.52
8489 9573 0.440758 TGATACGCGCCGTTGAAAAG 59.559 50.000 5.73 0.00 41.54 2.27
8490 9574 1.080298 ATGATACGCGCCGTTGAAAA 58.920 45.000 5.73 0.00 41.54 2.29
8491 9575 1.080298 AATGATACGCGCCGTTGAAA 58.920 45.000 5.73 0.00 41.54 2.69
8492 9576 1.080298 AAATGATACGCGCCGTTGAA 58.920 45.000 5.73 0.00 41.54 2.69
8493 9577 0.371989 CAAATGATACGCGCCGTTGA 59.628 50.000 5.73 0.00 41.54 3.18
8494 9578 1.193665 GCAAATGATACGCGCCGTTG 61.194 55.000 5.73 3.54 41.54 4.10
8495 9579 1.061887 GCAAATGATACGCGCCGTT 59.938 52.632 5.73 0.02 41.54 4.44
8496 9580 1.366111 AAGCAAATGATACGCGCCGT 61.366 50.000 5.73 5.91 44.35 5.68
8497 9581 0.654472 GAAGCAAATGATACGCGCCG 60.654 55.000 5.73 0.00 0.00 6.46
8498 9582 0.376852 TGAAGCAAATGATACGCGCC 59.623 50.000 5.73 0.00 0.00 6.53
8499 9583 2.172593 TTGAAGCAAATGATACGCGC 57.827 45.000 5.73 0.00 0.00 6.86
8500 9584 3.291585 GGATTGAAGCAAATGATACGCG 58.708 45.455 3.53 3.53 0.00 6.01
8567 9666 4.624336 AAAAATTGTACAGTGCACGACA 57.376 36.364 12.01 14.11 0.00 4.35
8617 9716 7.663043 ACTACCCCATGTTAAAAACTTTTCA 57.337 32.000 0.00 0.00 0.00 2.69
8628 9727 6.645884 AATAGGTGAAACTACCCCATGTTA 57.354 37.500 0.00 0.00 41.83 2.41
8652 9751 2.472695 ACGCTGTTGGAAAGCTATGA 57.527 45.000 0.00 0.00 38.57 2.15
8670 9769 1.200716 TCGGACCAAGACGTGTGATAC 59.799 52.381 0.00 0.00 0.00 2.24
8691 9790 9.649167 TTTTCAATCCAGTTTTTAAACCGTTTA 57.351 25.926 0.00 0.00 39.71 2.01
8712 9811 4.098807 GCCTTTTTCTGGGTACTGTTTTCA 59.901 41.667 0.00 0.00 0.00 2.69
8713 9812 4.098807 TGCCTTTTTCTGGGTACTGTTTTC 59.901 41.667 0.00 0.00 0.00 2.29
8725 9824 2.806608 ACTGCACATGCCTTTTTCTG 57.193 45.000 0.49 0.00 41.18 3.02
8726 9825 3.825143 AAACTGCACATGCCTTTTTCT 57.175 38.095 0.49 0.00 41.18 2.52
8727 9826 4.122046 AGAAAACTGCACATGCCTTTTTC 58.878 39.130 21.34 21.34 43.62 2.29
8729 9828 3.825143 AGAAAACTGCACATGCCTTTT 57.175 38.095 0.49 5.38 41.18 2.27
8737 9836 4.251543 TCTCGTCATAGAAAACTGCACA 57.748 40.909 0.00 0.00 0.00 4.57
8739 9838 6.426633 TGAATTTCTCGTCATAGAAAACTGCA 59.573 34.615 3.40 0.00 45.83 4.41
8740 9839 6.738649 GTGAATTTCTCGTCATAGAAAACTGC 59.261 38.462 3.40 0.00 45.83 4.40
8743 9842 7.167481 CGAGTGAATTTCTCGTCATAGAAAAC 58.833 38.462 19.02 0.00 45.83 2.43
8760 9859 9.393512 AGTACTACAGTATTAAGACGAGTGAAT 57.606 33.333 12.74 3.03 32.54 2.57
8763 9862 8.422973 AGAGTACTACAGTATTAAGACGAGTG 57.577 38.462 12.74 2.26 32.54 3.51
8780 9879 7.806487 CACGACATTGTTGAAGTAAGAGTACTA 59.194 37.037 11.07 0.00 39.79 1.82
8790 9889 2.288666 AGTGCACGACATTGTTGAAGT 58.711 42.857 12.01 0.00 0.00 3.01
8866 9965 9.120538 TGGTAAGAAATATTTGTCCTATTCTGC 57.879 33.333 5.17 0.00 0.00 4.26
8874 9973 6.127730 CCACTGGTGGTAAGAAATATTTGTCC 60.128 42.308 5.17 0.86 45.53 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.