Multiple sequence alignment - TraesCS1A01G126100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G126100 chr1A 100.000 4279 0 0 1 4279 150903039 150898761 0.000000e+00 7902.0
1 TraesCS1A01G126100 chr1A 94.872 39 2 0 1683 1721 552951608 552951570 1.280000e-05 62.1
2 TraesCS1A01G126100 chr1D 90.898 1692 60 41 1018 2666 139979037 139980677 0.000000e+00 2185.0
3 TraesCS1A01G126100 chr1D 89.707 923 40 25 3013 3910 139980845 139981737 0.000000e+00 1127.0
4 TraesCS1A01G126100 chr1D 91.781 365 19 6 3922 4277 139981707 139982069 8.260000e-137 497.0
5 TraesCS1A01G126100 chr1D 91.525 295 21 2 406 699 139978092 139978383 1.850000e-108 403.0
6 TraesCS1A01G126100 chr1D 77.193 171 33 4 3063 3228 461506367 461506198 1.270000e-15 95.3
7 TraesCS1A01G126100 chr1D 100.000 31 0 0 1691 1721 461486743 461486713 1.660000e-04 58.4
8 TraesCS1A01G126100 chr1B 90.579 881 40 23 1654 2518 198644546 198643693 0.000000e+00 1127.0
9 TraesCS1A01G126100 chr1B 94.118 663 21 7 942 1587 198645249 198644588 0.000000e+00 992.0
10 TraesCS1A01G126100 chr1B 86.854 639 37 24 3036 3644 198643257 198642636 0.000000e+00 671.0
11 TraesCS1A01G126100 chr1B 89.078 293 14 7 465 743 198645907 198645619 8.810000e-92 348.0
12 TraesCS1A01G126100 chr1B 100.000 39 0 0 764 802 198645558 198645520 5.940000e-09 73.1
13 TraesCS1A01G126100 chr1B 94.872 39 2 0 1683 1721 634413558 634413520 1.280000e-05 62.1
14 TraesCS1A01G126100 chr1B 94.872 39 2 0 1683 1721 634601325 634601363 1.280000e-05 62.1
15 TraesCS1A01G126100 chr3D 92.938 439 31 0 1654 2092 612291121 612290683 1.300000e-179 640.0
16 TraesCS1A01G126100 chr3D 88.212 509 35 15 1054 1561 612291732 612291248 6.170000e-163 584.0
17 TraesCS1A01G126100 chr3D 95.385 260 12 0 3021 3280 612290550 612290291 8.560000e-112 414.0
18 TraesCS1A01G126100 chr3D 91.837 49 4 0 1084 1132 123517119 123517071 7.680000e-08 69.4
19 TraesCS1A01G126100 chr3B 88.385 551 39 18 1017 1562 826711443 826711973 1.300000e-179 640.0
20 TraesCS1A01G126100 chr3B 92.500 440 31 2 1654 2092 826712094 826712532 2.810000e-176 628.0
21 TraesCS1A01G126100 chr3B 97.368 228 6 0 1 228 742449932 742450159 5.190000e-104 388.0
22 TraesCS1A01G126100 chr3B 96.087 230 9 0 1 230 12175002 12174773 4.040000e-100 375.0
23 TraesCS1A01G126100 chr3B 95.690 232 10 0 1 232 661163918 661163687 1.450000e-99 374.0
24 TraesCS1A01G126100 chr3B 93.145 248 17 0 3033 3280 826712730 826712977 8.740000e-97 364.0
25 TraesCS1A01G126100 chr3A 92.711 439 32 0 1654 2092 746944720 746944282 6.040000e-178 634.0
26 TraesCS1A01G126100 chr3A 87.293 543 38 18 1022 1561 746945393 746944879 3.680000e-165 592.0
27 TraesCS1A01G126100 chr3A 93.066 274 13 2 3013 3280 746944115 746943842 3.100000e-106 396.0
28 TraesCS1A01G126100 chr7A 96.507 229 8 0 1 229 699150502 699150274 3.120000e-101 379.0
29 TraesCS1A01G126100 chr6A 96.507 229 8 0 1 229 79971831 79971603 3.120000e-101 379.0
30 TraesCS1A01G126100 chr6A 96.087 230 8 1 1 230 134947524 134947296 1.450000e-99 374.0
31 TraesCS1A01G126100 chr6A 83.965 343 31 12 3949 4279 170898780 170898450 1.490000e-79 307.0
32 TraesCS1A01G126100 chr2A 96.507 229 8 0 1 229 84977542 84977770 3.120000e-101 379.0
33 TraesCS1A01G126100 chr5A 96.491 228 8 0 1 228 678227664 678227891 1.120000e-100 377.0
34 TraesCS1A01G126100 chr4A 96.491 228 8 0 1 228 104748513 104748740 1.120000e-100 377.0
35 TraesCS1A01G126100 chr4A 77.778 198 34 10 2818 3007 685824563 685824368 3.500000e-21 113.0
36 TraesCS1A01G126100 chr7B 82.249 338 44 10 3943 4277 224065584 224065908 1.170000e-70 278.0
37 TraesCS1A01G126100 chr7B 84.444 135 16 3 4041 4175 20103791 20103920 1.250000e-25 128.0
38 TraesCS1A01G126100 chr7B 76.879 173 32 8 3063 3229 9752855 9753025 1.640000e-14 91.6
39 TraesCS1A01G126100 chr6D 83.539 243 29 8 4019 4254 7420459 7420221 2.590000e-52 217.0
40 TraesCS1A01G126100 chr7D 77.301 163 32 4 2824 2982 637533581 637533420 1.640000e-14 91.6
41 TraesCS1A01G126100 chrUn 77.011 174 28 7 3063 3228 218156143 218156312 5.890000e-14 89.8
42 TraesCS1A01G126100 chrUn 77.011 174 28 7 3063 3228 246422226 246422057 5.890000e-14 89.8
43 TraesCS1A01G126100 chr5B 96.875 32 1 0 3758 3789 677977829 677977860 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G126100 chr1A 150898761 150903039 4278 True 7902.000000 7902 100.000000 1 4279 1 chr1A.!!$R1 4278
1 TraesCS1A01G126100 chr1D 139978092 139982069 3977 False 1053.000000 2185 90.977750 406 4277 4 chr1D.!!$F1 3871
2 TraesCS1A01G126100 chr1B 198642636 198645907 3271 True 642.220000 1127 92.125800 465 3644 5 chr1B.!!$R2 3179
3 TraesCS1A01G126100 chr3D 612290291 612291732 1441 True 546.000000 640 92.178333 1054 3280 3 chr3D.!!$R2 2226
4 TraesCS1A01G126100 chr3B 826711443 826712977 1534 False 544.000000 640 91.343333 1017 3280 3 chr3B.!!$F2 2263
5 TraesCS1A01G126100 chr3A 746943842 746945393 1551 True 540.666667 634 91.023333 1022 3280 3 chr3A.!!$R1 2258

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
194 195 0.250770 AAAGTTGGACCTCGGGAAGC 60.251 55.0 0.00 0.00 0.00 3.86 F
247 248 0.250858 TGGGACATGCTTCCACACTG 60.251 55.0 4.85 0.00 37.40 3.66 F
248 249 0.250901 GGGACATGCTTCCACACTGT 60.251 55.0 4.85 0.00 37.40 3.55 F
827 1045 0.306533 GCGGCATAATTACCACCACG 59.693 55.0 0.00 0.00 0.00 4.94 F
2153 2758 0.321919 CTTGCTTCCTGGTGCTGCTA 60.322 55.0 13.47 2.86 0.00 3.49 F
2582 3250 0.461339 CTAACACCGGGTTCCATCCG 60.461 60.0 6.32 0.00 46.43 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1317 1784 0.110283 CGCACGCACACATCAATCAA 60.110 50.000 0.0 0.0 0.00 2.57 R
2129 2734 0.678048 GCACCAGGAAGCAAGTAGGG 60.678 60.000 0.0 0.0 0.00 3.53 R
2156 2761 1.375268 GAGAGCAGAGCACCCACAC 60.375 63.158 0.0 0.0 0.00 3.82 R
2393 3054 0.041238 TCCCCACTGTCCTACTCCTG 59.959 60.000 0.0 0.0 0.00 3.86 R
3024 3943 0.034574 TACCCTGCAATTCGCCACAT 60.035 50.000 0.0 0.0 41.33 3.21 R
3570 4547 0.732571 AGCCGACACAACAACAACAG 59.267 50.000 0.0 0.0 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.340814 CCACAATGTAGTGCTTCCTCT 57.659 47.619 0.00 0.00 38.18 3.69
21 22 4.471904 CCACAATGTAGTGCTTCCTCTA 57.528 45.455 0.00 0.00 38.18 2.43
22 23 5.028549 CCACAATGTAGTGCTTCCTCTAT 57.971 43.478 0.00 0.00 38.18 1.98
23 24 5.053145 CCACAATGTAGTGCTTCCTCTATC 58.947 45.833 0.00 0.00 38.18 2.08
24 25 5.053145 CACAATGTAGTGCTTCCTCTATCC 58.947 45.833 0.00 0.00 32.04 2.59
25 26 4.965532 ACAATGTAGTGCTTCCTCTATCCT 59.034 41.667 0.00 0.00 0.00 3.24
26 27 5.069781 ACAATGTAGTGCTTCCTCTATCCTC 59.930 44.000 0.00 0.00 0.00 3.71
27 28 3.215151 TGTAGTGCTTCCTCTATCCTCG 58.785 50.000 0.00 0.00 0.00 4.63
28 29 2.445682 AGTGCTTCCTCTATCCTCGT 57.554 50.000 0.00 0.00 0.00 4.18
29 30 2.028130 AGTGCTTCCTCTATCCTCGTG 58.972 52.381 0.00 0.00 0.00 4.35
30 31 0.747255 TGCTTCCTCTATCCTCGTGC 59.253 55.000 0.00 0.00 0.00 5.34
31 32 1.036707 GCTTCCTCTATCCTCGTGCT 58.963 55.000 0.00 0.00 0.00 4.40
32 33 1.410882 GCTTCCTCTATCCTCGTGCTT 59.589 52.381 0.00 0.00 0.00 3.91
33 34 2.544903 GCTTCCTCTATCCTCGTGCTTC 60.545 54.545 0.00 0.00 0.00 3.86
34 35 2.437085 TCCTCTATCCTCGTGCTTCA 57.563 50.000 0.00 0.00 0.00 3.02
35 36 2.735151 TCCTCTATCCTCGTGCTTCAA 58.265 47.619 0.00 0.00 0.00 2.69
36 37 2.427453 TCCTCTATCCTCGTGCTTCAAC 59.573 50.000 0.00 0.00 0.00 3.18
37 38 2.428890 CCTCTATCCTCGTGCTTCAACT 59.571 50.000 0.00 0.00 0.00 3.16
38 39 3.118956 CCTCTATCCTCGTGCTTCAACTT 60.119 47.826 0.00 0.00 0.00 2.66
39 40 4.499183 CTCTATCCTCGTGCTTCAACTTT 58.501 43.478 0.00 0.00 0.00 2.66
40 41 4.245660 TCTATCCTCGTGCTTCAACTTTG 58.754 43.478 0.00 0.00 0.00 2.77
41 42 2.613026 TCCTCGTGCTTCAACTTTGA 57.387 45.000 0.00 0.00 34.92 2.69
42 43 2.210116 TCCTCGTGCTTCAACTTTGAC 58.790 47.619 0.00 0.00 36.83 3.18
43 44 1.264288 CCTCGTGCTTCAACTTTGACC 59.736 52.381 0.00 0.00 36.83 4.02
44 45 0.934496 TCGTGCTTCAACTTTGACCG 59.066 50.000 0.00 0.00 36.83 4.79
45 46 0.655733 CGTGCTTCAACTTTGACCGT 59.344 50.000 0.00 0.00 36.83 4.83
46 47 1.862201 CGTGCTTCAACTTTGACCGTA 59.138 47.619 0.00 0.00 36.83 4.02
47 48 2.285756 CGTGCTTCAACTTTGACCGTAA 59.714 45.455 0.00 0.00 36.83 3.18
48 49 3.242478 CGTGCTTCAACTTTGACCGTAAA 60.242 43.478 0.00 0.00 36.83 2.01
49 50 4.553938 CGTGCTTCAACTTTGACCGTAAAT 60.554 41.667 0.00 0.00 36.83 1.40
50 51 5.278604 GTGCTTCAACTTTGACCGTAAATT 58.721 37.500 0.00 0.00 36.83 1.82
51 52 6.432107 GTGCTTCAACTTTGACCGTAAATTA 58.568 36.000 0.00 0.00 36.83 1.40
52 53 6.913673 GTGCTTCAACTTTGACCGTAAATTAA 59.086 34.615 0.00 0.00 36.83 1.40
53 54 7.432838 GTGCTTCAACTTTGACCGTAAATTAAA 59.567 33.333 0.00 0.00 36.83 1.52
54 55 7.432838 TGCTTCAACTTTGACCGTAAATTAAAC 59.567 33.333 0.00 0.00 36.83 2.01
55 56 7.646526 GCTTCAACTTTGACCGTAAATTAAACT 59.353 33.333 0.00 0.00 36.83 2.66
57 58 9.934190 TTCAACTTTGACCGTAAATTAAACTAC 57.066 29.630 0.00 0.00 36.83 2.73
58 59 8.558700 TCAACTTTGACCGTAAATTAAACTACC 58.441 33.333 0.00 0.00 31.01 3.18
59 60 8.344098 CAACTTTGACCGTAAATTAAACTACCA 58.656 33.333 0.00 0.00 0.00 3.25
60 61 8.449251 ACTTTGACCGTAAATTAAACTACCAA 57.551 30.769 0.00 0.00 0.00 3.67
61 62 8.562052 ACTTTGACCGTAAATTAAACTACCAAG 58.438 33.333 0.00 0.00 0.00 3.61
62 63 8.674263 TTTGACCGTAAATTAAACTACCAAGA 57.326 30.769 0.00 0.00 0.00 3.02
63 64 7.656707 TGACCGTAAATTAAACTACCAAGAC 57.343 36.000 0.00 0.00 0.00 3.01
64 65 6.650390 TGACCGTAAATTAAACTACCAAGACC 59.350 38.462 0.00 0.00 0.00 3.85
65 66 5.639082 ACCGTAAATTAAACTACCAAGACCG 59.361 40.000 0.00 0.00 0.00 4.79
66 67 5.868801 CCGTAAATTAAACTACCAAGACCGA 59.131 40.000 0.00 0.00 0.00 4.69
67 68 6.536224 CCGTAAATTAAACTACCAAGACCGAT 59.464 38.462 0.00 0.00 0.00 4.18
68 69 7.064966 CCGTAAATTAAACTACCAAGACCGATT 59.935 37.037 0.00 0.00 0.00 3.34
69 70 7.901377 CGTAAATTAAACTACCAAGACCGATTG 59.099 37.037 0.00 0.00 0.00 2.67
70 71 5.813080 ATTAAACTACCAAGACCGATTGC 57.187 39.130 0.00 0.00 0.00 3.56
71 72 1.722011 AACTACCAAGACCGATTGCG 58.278 50.000 0.00 0.00 37.24 4.85
99 100 9.965824 CGGGAGCAAAAATTATATCAGTAAATT 57.034 29.630 0.00 0.00 0.00 1.82
148 149 2.112297 TTTTTCTCCCGCCGCAGT 59.888 55.556 0.00 0.00 0.00 4.40
149 150 1.527380 TTTTTCTCCCGCCGCAGTT 60.527 52.632 0.00 0.00 0.00 3.16
150 151 1.791103 TTTTTCTCCCGCCGCAGTTG 61.791 55.000 0.00 0.00 0.00 3.16
151 152 4.697756 TTCTCCCGCCGCAGTTGG 62.698 66.667 0.00 0.00 0.00 3.77
157 158 4.379243 CGCCGCAGTTGGTCTCCT 62.379 66.667 0.00 0.00 0.00 3.69
158 159 2.032681 GCCGCAGTTGGTCTCCTT 59.967 61.111 0.00 0.00 0.00 3.36
159 160 2.328099 GCCGCAGTTGGTCTCCTTG 61.328 63.158 0.00 0.00 0.00 3.61
160 161 1.672356 CCGCAGTTGGTCTCCTTGG 60.672 63.158 0.00 0.00 0.00 3.61
161 162 1.071471 CGCAGTTGGTCTCCTTGGT 59.929 57.895 0.00 0.00 0.00 3.67
162 163 0.535102 CGCAGTTGGTCTCCTTGGTT 60.535 55.000 0.00 0.00 0.00 3.67
163 164 1.270625 CGCAGTTGGTCTCCTTGGTTA 60.271 52.381 0.00 0.00 0.00 2.85
164 165 2.808933 CGCAGTTGGTCTCCTTGGTTAA 60.809 50.000 0.00 0.00 0.00 2.01
165 166 3.219281 GCAGTTGGTCTCCTTGGTTAAA 58.781 45.455 0.00 0.00 0.00 1.52
166 167 3.826729 GCAGTTGGTCTCCTTGGTTAAAT 59.173 43.478 0.00 0.00 0.00 1.40
167 168 4.280929 GCAGTTGGTCTCCTTGGTTAAATT 59.719 41.667 0.00 0.00 0.00 1.82
168 169 5.221441 GCAGTTGGTCTCCTTGGTTAAATTT 60.221 40.000 0.00 0.00 0.00 1.82
169 170 6.015772 GCAGTTGGTCTCCTTGGTTAAATTTA 60.016 38.462 0.00 0.00 0.00 1.40
170 171 7.309805 GCAGTTGGTCTCCTTGGTTAAATTTAT 60.310 37.037 0.00 0.00 0.00 1.40
171 172 8.028938 CAGTTGGTCTCCTTGGTTAAATTTATG 58.971 37.037 0.00 0.00 0.00 1.90
172 173 7.178451 AGTTGGTCTCCTTGGTTAAATTTATGG 59.822 37.037 0.00 0.00 0.00 2.74
173 174 6.557568 TGGTCTCCTTGGTTAAATTTATGGT 58.442 36.000 0.00 0.00 0.00 3.55
174 175 6.661805 TGGTCTCCTTGGTTAAATTTATGGTC 59.338 38.462 0.00 0.00 0.00 4.02
175 176 6.661805 GGTCTCCTTGGTTAAATTTATGGTCA 59.338 38.462 0.00 0.00 0.00 4.02
176 177 7.177744 GGTCTCCTTGGTTAAATTTATGGTCAA 59.822 37.037 0.00 1.87 0.00 3.18
177 178 8.581578 GTCTCCTTGGTTAAATTTATGGTCAAA 58.418 33.333 0.00 0.00 0.00 2.69
178 179 8.802267 TCTCCTTGGTTAAATTTATGGTCAAAG 58.198 33.333 0.00 0.96 0.00 2.77
179 180 8.485578 TCCTTGGTTAAATTTATGGTCAAAGT 57.514 30.769 0.00 0.00 0.00 2.66
180 181 8.929487 TCCTTGGTTAAATTTATGGTCAAAGTT 58.071 29.630 0.00 0.00 31.36 2.66
181 182 8.987890 CCTTGGTTAAATTTATGGTCAAAGTTG 58.012 33.333 0.00 0.00 29.44 3.16
182 183 8.894768 TTGGTTAAATTTATGGTCAAAGTTGG 57.105 30.769 0.00 0.00 29.44 3.77
183 184 8.251383 TGGTTAAATTTATGGTCAAAGTTGGA 57.749 30.769 0.00 0.00 29.44 3.53
184 185 8.145122 TGGTTAAATTTATGGTCAAAGTTGGAC 58.855 33.333 1.31 1.31 29.44 4.02
190 191 2.928416 GTCAAAGTTGGACCTCGGG 58.072 57.895 0.00 0.00 0.00 5.14
191 192 0.395312 GTCAAAGTTGGACCTCGGGA 59.605 55.000 0.00 0.00 0.00 5.14
192 193 1.133363 TCAAAGTTGGACCTCGGGAA 58.867 50.000 0.00 0.00 0.00 3.97
193 194 1.071699 TCAAAGTTGGACCTCGGGAAG 59.928 52.381 0.00 0.00 0.00 3.46
194 195 0.250770 AAAGTTGGACCTCGGGAAGC 60.251 55.000 0.00 0.00 0.00 3.86
195 196 2.434359 GTTGGACCTCGGGAAGCG 60.434 66.667 0.00 0.00 0.00 4.68
196 197 4.388499 TTGGACCTCGGGAAGCGC 62.388 66.667 0.00 0.00 0.00 5.92
213 214 2.279250 CGCGGACGCACTATATTTTG 57.721 50.000 17.35 0.00 42.06 2.44
214 215 1.070843 CGCGGACGCACTATATTTTGG 60.071 52.381 17.35 0.00 42.06 3.28
215 216 2.206750 GCGGACGCACTATATTTTGGA 58.793 47.619 12.31 0.00 41.49 3.53
216 217 2.610374 GCGGACGCACTATATTTTGGAA 59.390 45.455 12.31 0.00 41.49 3.53
217 218 3.250040 GCGGACGCACTATATTTTGGAAT 59.750 43.478 12.31 0.00 41.49 3.01
218 219 4.772434 CGGACGCACTATATTTTGGAATG 58.228 43.478 0.00 0.00 0.00 2.67
219 220 4.319477 CGGACGCACTATATTTTGGAATGG 60.319 45.833 0.00 0.00 0.00 3.16
220 221 4.819630 GGACGCACTATATTTTGGAATGGA 59.180 41.667 0.00 0.00 0.00 3.41
221 222 5.049405 GGACGCACTATATTTTGGAATGGAG 60.049 44.000 0.00 0.00 0.00 3.86
222 223 5.437060 ACGCACTATATTTTGGAATGGAGT 58.563 37.500 0.00 0.00 0.00 3.85
223 224 5.296780 ACGCACTATATTTTGGAATGGAGTG 59.703 40.000 0.00 0.00 39.66 3.51
224 225 5.527214 CGCACTATATTTTGGAATGGAGTGA 59.473 40.000 14.32 0.00 39.36 3.41
225 226 6.293081 CGCACTATATTTTGGAATGGAGTGAG 60.293 42.308 14.32 9.88 39.36 3.51
226 227 6.543831 GCACTATATTTTGGAATGGAGTGAGT 59.456 38.462 14.32 0.00 39.36 3.41
227 228 7.715249 GCACTATATTTTGGAATGGAGTGAGTA 59.285 37.037 14.32 0.00 39.36 2.59
228 229 9.784531 CACTATATTTTGGAATGGAGTGAGTAT 57.215 33.333 0.00 0.00 39.36 2.12
229 230 9.784531 ACTATATTTTGGAATGGAGTGAGTATG 57.215 33.333 0.00 0.00 0.00 2.39
230 231 9.224267 CTATATTTTGGAATGGAGTGAGTATGG 57.776 37.037 0.00 0.00 0.00 2.74
231 232 3.931907 TTGGAATGGAGTGAGTATGGG 57.068 47.619 0.00 0.00 0.00 4.00
232 233 3.129262 TGGAATGGAGTGAGTATGGGA 57.871 47.619 0.00 0.00 0.00 4.37
233 234 2.771943 TGGAATGGAGTGAGTATGGGAC 59.228 50.000 0.00 0.00 0.00 4.46
245 246 4.819783 TGGGACATGCTTCCACAC 57.180 55.556 4.85 0.00 37.40 3.82
246 247 2.154139 TGGGACATGCTTCCACACT 58.846 52.632 4.85 0.00 37.40 3.55
247 248 0.250858 TGGGACATGCTTCCACACTG 60.251 55.000 4.85 0.00 37.40 3.66
248 249 0.250901 GGGACATGCTTCCACACTGT 60.251 55.000 4.85 0.00 37.40 3.55
249 250 1.003118 GGGACATGCTTCCACACTGTA 59.997 52.381 4.85 0.00 37.40 2.74
250 251 2.356125 GGGACATGCTTCCACACTGTAT 60.356 50.000 4.85 0.00 37.40 2.29
251 252 3.118408 GGGACATGCTTCCACACTGTATA 60.118 47.826 4.85 0.00 37.40 1.47
252 253 4.444876 GGGACATGCTTCCACACTGTATAT 60.445 45.833 4.85 0.00 37.40 0.86
253 254 5.221641 GGGACATGCTTCCACACTGTATATA 60.222 44.000 4.85 0.00 37.40 0.86
254 255 6.467677 GGACATGCTTCCACACTGTATATAT 58.532 40.000 0.00 0.00 35.49 0.86
255 256 6.369890 GGACATGCTTCCACACTGTATATATG 59.630 42.308 0.00 0.00 35.49 1.78
256 257 6.233434 ACATGCTTCCACACTGTATATATGG 58.767 40.000 0.00 0.00 0.00 2.74
257 258 4.641396 TGCTTCCACACTGTATATATGGC 58.359 43.478 0.00 0.00 0.00 4.40
258 259 4.102367 TGCTTCCACACTGTATATATGGCA 59.898 41.667 0.00 0.00 0.00 4.92
259 260 4.452455 GCTTCCACACTGTATATATGGCAC 59.548 45.833 0.00 0.00 0.00 5.01
260 261 5.743130 GCTTCCACACTGTATATATGGCACT 60.743 44.000 0.00 0.00 0.00 4.40
261 262 5.213891 TCCACACTGTATATATGGCACTG 57.786 43.478 0.00 0.00 0.00 3.66
262 263 4.653801 TCCACACTGTATATATGGCACTGT 59.346 41.667 0.00 0.00 0.00 3.55
263 264 5.836358 TCCACACTGTATATATGGCACTGTA 59.164 40.000 0.00 0.00 0.00 2.74
264 265 6.015434 TCCACACTGTATATATGGCACTGTAG 60.015 42.308 0.00 0.00 0.00 2.74
265 266 6.239317 CCACACTGTATATATGGCACTGTAGT 60.239 42.308 0.00 0.00 0.00 2.73
266 267 7.210174 CACACTGTATATATGGCACTGTAGTT 58.790 38.462 0.00 0.00 0.00 2.24
267 268 7.710907 CACACTGTATATATGGCACTGTAGTTT 59.289 37.037 0.00 0.00 0.00 2.66
268 269 8.920174 ACACTGTATATATGGCACTGTAGTTTA 58.080 33.333 0.00 0.00 0.00 2.01
269 270 9.929180 CACTGTATATATGGCACTGTAGTTTAT 57.071 33.333 0.00 0.00 0.00 1.40
280 281 9.169592 TGGCACTGTAGTTTATAAATAGTTTCC 57.830 33.333 0.31 7.97 0.00 3.13
281 282 9.392259 GGCACTGTAGTTTATAAATAGTTTCCT 57.608 33.333 0.31 0.00 0.00 3.36
296 297 8.786826 AATAGTTTCCTTCGTAAACATGATCA 57.213 30.769 0.00 0.00 38.92 2.92
297 298 8.786826 ATAGTTTCCTTCGTAAACATGATCAA 57.213 30.769 0.00 0.00 38.92 2.57
298 299 7.504924 AGTTTCCTTCGTAAACATGATCAAA 57.495 32.000 0.00 0.00 38.92 2.69
299 300 7.584987 AGTTTCCTTCGTAAACATGATCAAAG 58.415 34.615 0.00 0.00 38.92 2.77
300 301 7.228706 AGTTTCCTTCGTAAACATGATCAAAGT 59.771 33.333 0.00 0.00 38.92 2.66
301 302 7.504924 TTCCTTCGTAAACATGATCAAAGTT 57.495 32.000 0.00 5.23 0.00 2.66
302 303 7.129109 TCCTTCGTAAACATGATCAAAGTTC 57.871 36.000 14.84 5.58 0.00 3.01
303 304 6.708502 TCCTTCGTAAACATGATCAAAGTTCA 59.291 34.615 14.84 1.13 0.00 3.18
304 305 7.390440 TCCTTCGTAAACATGATCAAAGTTCAT 59.610 33.333 14.84 5.86 34.15 2.57
305 306 8.664798 CCTTCGTAAACATGATCAAAGTTCATA 58.335 33.333 14.84 5.08 32.63 2.15
309 310 9.825972 CGTAAACATGATCAAAGTTCATAAAGT 57.174 29.630 14.84 3.62 32.63 2.66
352 353 9.010029 AGTTATAAACACTACAAAACAGATGGG 57.990 33.333 0.00 0.00 0.00 4.00
353 354 9.005777 GTTATAAACACTACAAAACAGATGGGA 57.994 33.333 0.00 0.00 0.00 4.37
354 355 9.747898 TTATAAACACTACAAAACAGATGGGAT 57.252 29.630 0.00 0.00 0.00 3.85
355 356 6.976934 AAACACTACAAAACAGATGGGATT 57.023 33.333 0.00 0.00 0.00 3.01
356 357 5.964958 ACACTACAAAACAGATGGGATTG 57.035 39.130 0.00 0.00 0.00 2.67
357 358 5.385198 ACACTACAAAACAGATGGGATTGT 58.615 37.500 0.00 0.00 37.86 2.71
358 359 6.539173 ACACTACAAAACAGATGGGATTGTA 58.461 36.000 0.00 0.00 35.89 2.41
360 361 6.683974 CTACAAAACAGATGGGATTGTAGG 57.316 41.667 17.73 7.51 44.75 3.18
361 362 4.998051 ACAAAACAGATGGGATTGTAGGT 58.002 39.130 0.00 0.00 32.81 3.08
362 363 6.134535 ACAAAACAGATGGGATTGTAGGTA 57.865 37.500 0.00 0.00 32.81 3.08
363 364 6.731467 ACAAAACAGATGGGATTGTAGGTAT 58.269 36.000 0.00 0.00 32.81 2.73
364 365 7.867921 ACAAAACAGATGGGATTGTAGGTATA 58.132 34.615 0.00 0.00 32.81 1.47
365 366 8.333235 ACAAAACAGATGGGATTGTAGGTATAA 58.667 33.333 0.00 0.00 32.81 0.98
366 367 9.354673 CAAAACAGATGGGATTGTAGGTATAAT 57.645 33.333 0.00 0.00 0.00 1.28
367 368 9.936329 AAAACAGATGGGATTGTAGGTATAATT 57.064 29.630 0.00 0.00 0.00 1.40
368 369 9.936329 AAACAGATGGGATTGTAGGTATAATTT 57.064 29.630 0.00 0.00 0.00 1.82
369 370 9.936329 AACAGATGGGATTGTAGGTATAATTTT 57.064 29.630 0.00 0.00 0.00 1.82
370 371 9.936329 ACAGATGGGATTGTAGGTATAATTTTT 57.064 29.630 0.00 0.00 0.00 1.94
451 452 2.835431 AGTGCGCCGCTATCCTCT 60.835 61.111 11.67 0.00 0.00 3.69
492 493 5.824904 ATATTGAGTTTGCACATGGAGAC 57.175 39.130 0.00 0.00 0.00 3.36
561 562 3.493873 CCCCTTAACGGCTAGTGGATTAC 60.494 52.174 0.00 0.00 0.00 1.89
603 605 1.100510 TATCCCTTCCGTGTGAGTCG 58.899 55.000 0.00 0.00 0.00 4.18
605 607 1.372997 CCCTTCCGTGTGAGTCGTG 60.373 63.158 0.00 0.00 0.00 4.35
633 642 0.886490 CAGGTGACACAAGCCCTCAC 60.886 60.000 8.08 0.00 34.68 3.51
644 653 1.903404 GCCCTCACAAACCCACCAG 60.903 63.158 0.00 0.00 0.00 4.00
718 891 7.280652 ACGTACAGTACAACCTAAACAAACAAT 59.719 33.333 11.37 0.00 0.00 2.71
719 892 7.795272 CGTACAGTACAACCTAAACAAACAATC 59.205 37.037 11.37 0.00 0.00 2.67
725 915 7.360113 ACAACCTAAACAAACAATCTCCATT 57.640 32.000 0.00 0.00 0.00 3.16
727 917 7.069331 ACAACCTAAACAAACAATCTCCATTCA 59.931 33.333 0.00 0.00 0.00 2.57
750 940 2.158696 CCTTCCTTCCTTCCCATAGCTG 60.159 54.545 0.00 0.00 0.00 4.24
751 941 2.270434 TCCTTCCTTCCCATAGCTGT 57.730 50.000 0.00 0.00 0.00 4.40
752 942 2.562296 TCCTTCCTTCCCATAGCTGTT 58.438 47.619 0.00 0.00 0.00 3.16
753 943 2.919602 TCCTTCCTTCCCATAGCTGTTT 59.080 45.455 0.00 0.00 0.00 2.83
754 944 3.333680 TCCTTCCTTCCCATAGCTGTTTT 59.666 43.478 0.00 0.00 0.00 2.43
755 945 4.089361 CCTTCCTTCCCATAGCTGTTTTT 58.911 43.478 0.00 0.00 0.00 1.94
827 1045 0.306533 GCGGCATAATTACCACCACG 59.693 55.000 0.00 0.00 0.00 4.94
828 1046 1.658994 CGGCATAATTACCACCACGT 58.341 50.000 0.00 0.00 0.00 4.49
829 1047 2.823984 CGGCATAATTACCACCACGTA 58.176 47.619 0.00 0.00 0.00 3.57
832 1050 2.874086 GCATAATTACCACCACGTACCC 59.126 50.000 0.00 0.00 0.00 3.69
834 1052 4.374399 CATAATTACCACCACGTACCCTC 58.626 47.826 0.00 0.00 0.00 4.30
835 1053 0.819582 ATTACCACCACGTACCCTCG 59.180 55.000 0.00 0.00 0.00 4.63
836 1054 0.539438 TTACCACCACGTACCCTCGT 60.539 55.000 0.00 0.00 45.10 4.18
837 1055 0.326595 TACCACCACGTACCCTCGTA 59.673 55.000 0.00 0.00 42.27 3.43
838 1056 0.962356 ACCACCACGTACCCTCGTAG 60.962 60.000 0.00 0.00 42.27 3.51
839 1057 0.962356 CCACCACGTACCCTCGTAGT 60.962 60.000 0.00 0.00 42.27 2.73
840 1058 1.678728 CCACCACGTACCCTCGTAGTA 60.679 57.143 0.00 0.00 42.27 1.82
841 1059 1.667724 CACCACGTACCCTCGTAGTAG 59.332 57.143 0.00 0.00 42.27 2.57
842 1060 1.303309 CCACGTACCCTCGTAGTAGG 58.697 60.000 0.00 0.00 42.27 3.18
856 1074 7.418483 CCCTCGTAGTAGGAGTAGTAGTAAGTT 60.418 44.444 16.56 0.00 39.15 2.66
871 1089 4.270008 AGTAAGTTGTAATCCATGTGCCC 58.730 43.478 0.00 0.00 0.00 5.36
882 1100 5.722172 ATCCATGTGCCCTGCTATATAAT 57.278 39.130 0.00 0.00 0.00 1.28
885 1103 7.211897 TCCATGTGCCCTGCTATATAATAAT 57.788 36.000 0.00 0.00 0.00 1.28
886 1104 7.282585 TCCATGTGCCCTGCTATATAATAATC 58.717 38.462 0.00 0.00 0.00 1.75
887 1105 6.488006 CCATGTGCCCTGCTATATAATAATCC 59.512 42.308 0.00 0.00 0.00 3.01
888 1106 6.001449 TGTGCCCTGCTATATAATAATCCC 57.999 41.667 0.00 0.00 0.00 3.85
889 1107 5.104109 TGTGCCCTGCTATATAATAATCCCC 60.104 44.000 0.00 0.00 0.00 4.81
890 1108 5.132816 GTGCCCTGCTATATAATAATCCCCT 59.867 44.000 0.00 0.00 0.00 4.79
891 1109 6.329197 GTGCCCTGCTATATAATAATCCCCTA 59.671 42.308 0.00 0.00 0.00 3.53
892 1110 6.911992 TGCCCTGCTATATAATAATCCCCTAA 59.088 38.462 0.00 0.00 0.00 2.69
893 1111 7.072454 TGCCCTGCTATATAATAATCCCCTAAG 59.928 40.741 0.00 0.00 0.00 2.18
894 1112 7.454225 CCCTGCTATATAATAATCCCCTAAGC 58.546 42.308 0.00 0.00 0.00 3.09
895 1113 7.072454 CCCTGCTATATAATAATCCCCTAAGCA 59.928 40.741 0.00 0.00 35.21 3.91
896 1114 7.934120 CCTGCTATATAATAATCCCCTAAGCAC 59.066 40.741 0.00 0.00 33.15 4.40
897 1115 8.624019 TGCTATATAATAATCCCCTAAGCACT 57.376 34.615 0.00 0.00 31.78 4.40
898 1116 8.705594 TGCTATATAATAATCCCCTAAGCACTC 58.294 37.037 0.00 0.00 31.78 3.51
899 1117 8.929487 GCTATATAATAATCCCCTAAGCACTCT 58.071 37.037 0.00 0.00 0.00 3.24
902 1120 7.880265 ATAATAATCCCCTAAGCACTCTCTT 57.120 36.000 0.00 0.00 0.00 2.85
903 1121 6.582929 AATAATCCCCTAAGCACTCTCTTT 57.417 37.500 0.00 0.00 0.00 2.52
904 1122 4.936685 AATCCCCTAAGCACTCTCTTTT 57.063 40.909 0.00 0.00 0.00 2.27
905 1123 7.691993 ATAATCCCCTAAGCACTCTCTTTTA 57.308 36.000 0.00 0.00 0.00 1.52
906 1124 5.622346 ATCCCCTAAGCACTCTCTTTTAG 57.378 43.478 0.00 0.00 0.00 1.85
907 1125 3.197983 TCCCCTAAGCACTCTCTTTTAGC 59.802 47.826 0.00 0.00 0.00 3.09
908 1126 3.536570 CCCTAAGCACTCTCTTTTAGCC 58.463 50.000 0.00 0.00 0.00 3.93
909 1127 3.190874 CCTAAGCACTCTCTTTTAGCCG 58.809 50.000 0.00 0.00 0.00 5.52
910 1128 2.841442 AAGCACTCTCTTTTAGCCGT 57.159 45.000 0.00 0.00 0.00 5.68
911 1129 2.371910 AGCACTCTCTTTTAGCCGTC 57.628 50.000 0.00 0.00 0.00 4.79
912 1130 1.066787 AGCACTCTCTTTTAGCCGTCC 60.067 52.381 0.00 0.00 0.00 4.79
913 1131 1.337823 GCACTCTCTTTTAGCCGTCCA 60.338 52.381 0.00 0.00 0.00 4.02
914 1132 2.870435 GCACTCTCTTTTAGCCGTCCAA 60.870 50.000 0.00 0.00 0.00 3.53
915 1133 3.600388 CACTCTCTTTTAGCCGTCCAAT 58.400 45.455 0.00 0.00 0.00 3.16
916 1134 3.372206 CACTCTCTTTTAGCCGTCCAATG 59.628 47.826 0.00 0.00 0.00 2.82
917 1135 2.352960 CTCTCTTTTAGCCGTCCAATGC 59.647 50.000 0.00 0.00 0.00 3.56
918 1136 1.401905 CTCTTTTAGCCGTCCAATGCC 59.598 52.381 0.00 0.00 0.00 4.40
919 1137 1.004277 TCTTTTAGCCGTCCAATGCCT 59.996 47.619 0.00 0.00 0.00 4.75
920 1138 1.133025 CTTTTAGCCGTCCAATGCCTG 59.867 52.381 0.00 0.00 0.00 4.85
921 1139 1.312371 TTTAGCCGTCCAATGCCTGC 61.312 55.000 0.00 0.00 0.00 4.85
922 1140 2.196997 TTAGCCGTCCAATGCCTGCT 62.197 55.000 0.00 0.00 0.00 4.24
923 1141 2.593468 TAGCCGTCCAATGCCTGCTC 62.593 60.000 0.00 0.00 0.00 4.26
924 1142 2.825836 CCGTCCAATGCCTGCTCC 60.826 66.667 0.00 0.00 0.00 4.70
925 1143 2.825836 CGTCCAATGCCTGCTCCC 60.826 66.667 0.00 0.00 0.00 4.30
926 1144 2.440980 GTCCAATGCCTGCTCCCC 60.441 66.667 0.00 0.00 0.00 4.81
927 1145 3.743017 TCCAATGCCTGCTCCCCC 61.743 66.667 0.00 0.00 0.00 5.40
950 1299 4.325344 CCTCTCTCCCTCTCTCTTCTTTCT 60.325 50.000 0.00 0.00 0.00 2.52
979 1328 3.345808 GCGCGCTGTTTGGTGAGA 61.346 61.111 26.67 0.00 0.00 3.27
986 1335 0.954452 CTGTTTGGTGAGAGGCCAAC 59.046 55.000 5.01 0.00 44.70 3.77
1296 1763 3.062909 TGTTTACACGTGAGTTGCTGAAC 59.937 43.478 25.01 11.97 46.40 3.18
1308 1775 1.271127 TGCTGAACCGGATGGATGGA 61.271 55.000 9.46 0.00 39.21 3.41
1312 1779 0.890996 GAACCGGATGGATGGATGGC 60.891 60.000 9.46 0.00 39.21 4.40
1314 1781 1.303074 CCGGATGGATGGATGGCTG 60.303 63.158 0.00 0.00 37.49 4.85
1317 1784 0.702902 GGATGGATGGATGGCTGGAT 59.297 55.000 0.00 0.00 0.00 3.41
1587 2054 1.917273 TAGCGCCGCTAGTAAACAAG 58.083 50.000 15.99 0.00 40.44 3.16
1612 2162 5.399013 AGTTTTCTTGTCCGTTTCTTGTTG 58.601 37.500 0.00 0.00 0.00 3.33
1633 2226 6.889494 GTTGAAAACGAAAAACCAAAAAGGA 58.111 32.000 0.00 0.00 36.82 3.36
1635 2228 6.889494 TGAAAACGAAAAACCAAAAAGGAAC 58.111 32.000 0.00 0.00 41.22 3.62
1639 2232 3.548668 CGAAAAACCAAAAAGGAACCGAC 59.451 43.478 0.00 0.00 41.22 4.79
1640 2233 2.855660 AAACCAAAAAGGAACCGACG 57.144 45.000 0.00 0.00 41.22 5.12
1641 2234 2.041251 AACCAAAAAGGAACCGACGA 57.959 45.000 0.00 0.00 41.22 4.20
1642 2235 2.041251 ACCAAAAAGGAACCGACGAA 57.959 45.000 0.00 0.00 41.22 3.85
1643 2236 1.672363 ACCAAAAAGGAACCGACGAAC 59.328 47.619 0.00 0.00 41.22 3.95
1644 2237 1.944709 CCAAAAAGGAACCGACGAACT 59.055 47.619 0.00 0.00 41.22 3.01
1645 2238 2.032290 CCAAAAAGGAACCGACGAACTC 60.032 50.000 0.00 0.00 41.22 3.01
1646 2239 2.607631 AAAAGGAACCGACGAACTCA 57.392 45.000 0.00 0.00 0.00 3.41
1648 2241 1.861971 AAGGAACCGACGAACTCAAC 58.138 50.000 0.00 0.00 0.00 3.18
1649 2242 0.748450 AGGAACCGACGAACTCAACA 59.252 50.000 0.00 0.00 0.00 3.33
1650 2243 1.137479 AGGAACCGACGAACTCAACAA 59.863 47.619 0.00 0.00 0.00 2.83
1652 2245 2.157085 GGAACCGACGAACTCAACAATC 59.843 50.000 0.00 0.00 0.00 2.67
2122 2723 4.464244 CCTCCCTTTTCCTCCTTTGATTTC 59.536 45.833 0.00 0.00 0.00 2.17
2129 2734 7.763071 CCTTTTCCTCCTTTGATTTCATTGATC 59.237 37.037 0.00 0.00 0.00 2.92
2143 2748 3.782523 TCATTGATCCCTACTTGCTTCCT 59.217 43.478 0.00 0.00 0.00 3.36
2144 2749 3.634397 TTGATCCCTACTTGCTTCCTG 57.366 47.619 0.00 0.00 0.00 3.86
2145 2750 1.839994 TGATCCCTACTTGCTTCCTGG 59.160 52.381 0.00 0.00 0.00 4.45
2146 2751 1.840635 GATCCCTACTTGCTTCCTGGT 59.159 52.381 0.00 0.00 0.00 4.00
2147 2752 0.984230 TCCCTACTTGCTTCCTGGTG 59.016 55.000 0.00 0.00 0.00 4.17
2148 2753 0.678048 CCCTACTTGCTTCCTGGTGC 60.678 60.000 7.32 7.32 0.00 5.01
2149 2754 0.326264 CCTACTTGCTTCCTGGTGCT 59.674 55.000 13.47 0.05 0.00 4.40
2150 2755 1.446907 CTACTTGCTTCCTGGTGCTG 58.553 55.000 13.47 9.67 0.00 4.41
2151 2756 0.606401 TACTTGCTTCCTGGTGCTGC 60.606 55.000 13.47 0.00 0.00 5.25
2152 2757 1.602888 CTTGCTTCCTGGTGCTGCT 60.603 57.895 13.47 0.00 0.00 4.24
2153 2758 0.321919 CTTGCTTCCTGGTGCTGCTA 60.322 55.000 13.47 2.86 0.00 3.49
2154 2759 0.321919 TTGCTTCCTGGTGCTGCTAG 60.322 55.000 13.47 0.00 0.00 3.42
2155 2760 2.111582 GCTTCCTGGTGCTGCTAGC 61.112 63.158 8.10 8.10 42.82 3.42
2156 2761 1.812922 CTTCCTGGTGCTGCTAGCG 60.813 63.158 10.77 6.22 46.26 4.26
2157 2762 2.513026 CTTCCTGGTGCTGCTAGCGT 62.513 60.000 10.77 0.00 46.26 5.07
2158 2763 2.786539 TTCCTGGTGCTGCTAGCGTG 62.787 60.000 10.77 6.71 46.26 5.34
2193 2828 3.593328 TCTCCTCTGTTTCAATGGGGAAT 59.407 43.478 0.00 0.00 0.00 3.01
2277 2912 1.888215 AGCATGTCAGTTCCACACAG 58.112 50.000 0.00 0.00 0.00 3.66
2290 2925 4.717629 CACAGAAGACCGGCGCGA 62.718 66.667 12.10 0.00 0.00 5.87
2292 2927 4.421479 CAGAAGACCGGCGCGAGT 62.421 66.667 12.10 2.66 0.00 4.18
2302 2937 3.482783 GCGCGAGTGGTGAGCTTC 61.483 66.667 12.10 0.00 0.00 3.86
2316 2963 1.172812 AGCTTCCACCGTCCTTTTGC 61.173 55.000 0.00 0.00 0.00 3.68
2325 2972 4.083484 CCACCGTCCTTTTGCTAGTTTTAG 60.083 45.833 0.00 0.00 0.00 1.85
2326 2973 4.753107 CACCGTCCTTTTGCTAGTTTTAGA 59.247 41.667 0.00 0.00 0.00 2.10
2327 2974 5.411669 CACCGTCCTTTTGCTAGTTTTAGAT 59.588 40.000 0.00 0.00 0.00 1.98
2329 2976 5.642063 CCGTCCTTTTGCTAGTTTTAGATGA 59.358 40.000 0.00 0.00 0.00 2.92
2330 2977 6.183360 CCGTCCTTTTGCTAGTTTTAGATGAG 60.183 42.308 0.00 0.00 0.00 2.90
2331 2978 6.369065 CGTCCTTTTGCTAGTTTTAGATGAGT 59.631 38.462 0.00 0.00 0.00 3.41
2332 2979 7.522374 GTCCTTTTGCTAGTTTTAGATGAGTG 58.478 38.462 0.00 0.00 0.00 3.51
2377 3038 3.053828 CCAGGGCAACAAGGCAAG 58.946 61.111 0.00 0.00 46.44 4.01
2378 3039 2.576832 CCAGGGCAACAAGGCAAGG 61.577 63.158 0.00 0.00 46.44 3.61
2379 3040 2.919328 AGGGCAACAAGGCAAGGC 60.919 61.111 0.00 0.00 46.44 4.35
2393 3054 0.895559 CAAGGCTGGTGTTCCTTCCC 60.896 60.000 0.00 0.00 40.50 3.97
2518 3186 1.148157 CGCATAGCTGTTCCTCACGG 61.148 60.000 0.00 0.00 34.40 4.94
2523 3191 4.268687 CTGTTCCTCACGGCTCAC 57.731 61.111 0.00 0.00 0.00 3.51
2546 3214 1.411977 ACTGCTGGTGCTATCTGCTAG 59.588 52.381 0.00 0.00 43.37 3.42
2582 3250 0.461339 CTAACACCGGGTTCCATCCG 60.461 60.000 6.32 0.00 46.43 4.18
2654 3322 2.555757 GGGACATAAATGCCATCTGCTC 59.444 50.000 5.99 0.00 42.00 4.26
2666 3334 2.762887 CCATCTGCTCTACCTCACTGAA 59.237 50.000 0.00 0.00 0.00 3.02
2668 3336 2.171840 TCTGCTCTACCTCACTGAACC 58.828 52.381 0.00 0.00 0.00 3.62
2669 3337 1.895798 CTGCTCTACCTCACTGAACCA 59.104 52.381 0.00 0.00 0.00 3.67
2670 3338 1.618837 TGCTCTACCTCACTGAACCAC 59.381 52.381 0.00 0.00 0.00 4.16
2671 3339 1.402984 GCTCTACCTCACTGAACCACG 60.403 57.143 0.00 0.00 0.00 4.94
2672 3340 1.887198 CTCTACCTCACTGAACCACGT 59.113 52.381 0.00 0.00 0.00 4.49
2673 3341 3.079578 CTCTACCTCACTGAACCACGTA 58.920 50.000 0.00 0.00 0.00 3.57
2674 3342 3.079578 TCTACCTCACTGAACCACGTAG 58.920 50.000 0.00 0.00 0.00 3.51
2676 3344 2.867624 ACCTCACTGAACCACGTAGTA 58.132 47.619 0.00 0.00 41.61 1.82
2677 3345 3.428532 ACCTCACTGAACCACGTAGTAT 58.571 45.455 0.00 0.00 41.61 2.12
2678 3346 4.592942 ACCTCACTGAACCACGTAGTATA 58.407 43.478 0.00 0.00 41.61 1.47
2679 3347 4.397417 ACCTCACTGAACCACGTAGTATAC 59.603 45.833 0.00 0.00 41.61 1.47
2680 3348 4.201990 CCTCACTGAACCACGTAGTATACC 60.202 50.000 0.00 0.00 41.61 2.73
2681 3349 4.592942 TCACTGAACCACGTAGTATACCT 58.407 43.478 0.00 0.00 41.61 3.08
2682 3350 4.397103 TCACTGAACCACGTAGTATACCTG 59.603 45.833 0.00 0.00 41.61 4.00
2683 3351 4.397103 CACTGAACCACGTAGTATACCTGA 59.603 45.833 0.00 0.00 41.61 3.86
2684 3352 5.067413 CACTGAACCACGTAGTATACCTGAT 59.933 44.000 0.00 0.00 41.61 2.90
2685 3353 5.067413 ACTGAACCACGTAGTATACCTGATG 59.933 44.000 0.00 0.00 41.61 3.07
2686 3354 4.340097 TGAACCACGTAGTATACCTGATGG 59.660 45.833 10.71 10.71 41.61 3.51
2687 3355 3.907221 ACCACGTAGTATACCTGATGGT 58.093 45.455 11.72 11.72 45.95 3.55
2688 3356 3.887716 ACCACGTAGTATACCTGATGGTC 59.112 47.826 11.72 0.00 40.93 4.02
2689 3357 4.142790 CCACGTAGTATACCTGATGGTCT 58.857 47.826 0.00 0.00 40.93 3.85
2690 3358 4.583489 CCACGTAGTATACCTGATGGTCTT 59.417 45.833 0.00 0.00 40.93 3.01
2691 3359 5.766670 CCACGTAGTATACCTGATGGTCTTA 59.233 44.000 0.00 0.00 40.93 2.10
2692 3360 6.072618 CCACGTAGTATACCTGATGGTCTTAG 60.073 46.154 0.00 0.00 40.93 2.18
2693 3361 6.485984 CACGTAGTATACCTGATGGTCTTAGT 59.514 42.308 0.00 0.00 40.93 2.24
2694 3362 7.658982 CACGTAGTATACCTGATGGTCTTAGTA 59.341 40.741 0.00 0.00 40.93 1.82
2695 3363 7.659390 ACGTAGTATACCTGATGGTCTTAGTAC 59.341 40.741 0.00 0.00 43.46 2.73
2696 3364 7.877097 CGTAGTATACCTGATGGTCTTAGTACT 59.123 40.741 0.00 0.00 44.78 2.73
2697 3365 9.571816 GTAGTATACCTGATGGTCTTAGTACTT 57.428 37.037 0.00 0.00 44.78 2.24
2699 3367 9.490083 AGTATACCTGATGGTCTTAGTACTTTT 57.510 33.333 0.00 0.00 44.78 2.27
2730 3398 5.193124 TGAGGGAGTGATGGTCTTAGTACTA 59.807 44.000 0.00 0.00 0.00 1.82
2756 3594 2.500442 CGTCGCACGCTCACTCATC 61.500 63.158 0.00 0.00 33.65 2.92
2774 3612 5.050091 ACTCATCACGCAAAGACAACTTTAG 60.050 40.000 0.00 0.00 43.41 1.85
2775 3613 4.213270 TCATCACGCAAAGACAACTTTAGG 59.787 41.667 0.00 0.00 43.41 2.69
2776 3614 3.537580 TCACGCAAAGACAACTTTAGGT 58.462 40.909 0.00 0.00 43.41 3.08
2777 3615 4.695396 TCACGCAAAGACAACTTTAGGTA 58.305 39.130 0.00 0.00 43.41 3.08
2778 3616 4.508861 TCACGCAAAGACAACTTTAGGTAC 59.491 41.667 0.00 0.00 43.41 3.34
2780 3618 4.877251 ACGCAAAGACAACTTTAGGTACAA 59.123 37.500 0.00 0.00 43.41 2.41
2786 3630 9.413048 CAAAGACAACTTTAGGTACAAACAAAA 57.587 29.630 0.00 0.00 43.41 2.44
2788 3632 7.255569 AGACAACTTTAGGTACAAACAAAAGC 58.744 34.615 0.00 0.00 35.27 3.51
2789 3633 6.926313 ACAACTTTAGGTACAAACAAAAGCA 58.074 32.000 0.00 0.00 35.27 3.91
2820 3728 5.930569 ACAAAGAACGGGACAGAGTATTTAC 59.069 40.000 0.00 0.00 0.00 2.01
2823 3731 5.963594 AGAACGGGACAGAGTATTTACTTC 58.036 41.667 0.00 0.00 36.50 3.01
2824 3732 5.479375 AGAACGGGACAGAGTATTTACTTCA 59.521 40.000 0.00 0.00 36.50 3.02
2825 3733 5.733620 ACGGGACAGAGTATTTACTTCAA 57.266 39.130 0.00 0.00 36.50 2.69
2826 3734 5.721232 ACGGGACAGAGTATTTACTTCAAG 58.279 41.667 0.00 0.00 36.50 3.02
2827 3735 5.109903 CGGGACAGAGTATTTACTTCAAGG 58.890 45.833 0.00 0.00 36.50 3.61
2828 3736 5.429130 GGGACAGAGTATTTACTTCAAGGG 58.571 45.833 0.00 0.00 36.50 3.95
2830 3738 5.045797 GGACAGAGTATTTACTTCAAGGGGT 60.046 44.000 0.00 0.00 36.50 4.95
2831 3739 5.805728 ACAGAGTATTTACTTCAAGGGGTG 58.194 41.667 0.00 0.00 36.50 4.61
2832 3740 5.309806 ACAGAGTATTTACTTCAAGGGGTGT 59.690 40.000 0.00 0.00 36.50 4.16
2834 3742 7.042335 CAGAGTATTTACTTCAAGGGGTGTAG 58.958 42.308 0.00 0.00 36.50 2.74
2835 3743 5.742063 AGTATTTACTTCAAGGGGTGTAGC 58.258 41.667 0.00 0.00 31.13 3.58
2836 3744 4.929146 ATTTACTTCAAGGGGTGTAGCT 57.071 40.909 0.00 0.00 0.00 3.32
2837 3745 6.670902 AGTATTTACTTCAAGGGGTGTAGCTA 59.329 38.462 0.00 0.00 31.13 3.32
2839 3747 2.188817 ACTTCAAGGGGTGTAGCTAGG 58.811 52.381 0.00 0.00 0.00 3.02
2841 3749 1.861982 TCAAGGGGTGTAGCTAGGTC 58.138 55.000 0.00 0.00 0.00 3.85
2846 3754 1.217436 GGGGTGTAGCTAGGTCTAGGT 59.783 57.143 13.29 13.29 44.92 3.08
2847 3755 2.585330 GGGTGTAGCTAGGTCTAGGTC 58.415 57.143 12.29 6.41 42.28 3.85
2848 3756 2.091994 GGGTGTAGCTAGGTCTAGGTCA 60.092 54.545 12.29 8.47 42.28 4.02
2849 3757 3.626729 GGGTGTAGCTAGGTCTAGGTCAA 60.627 52.174 12.29 1.38 42.28 3.18
2850 3758 3.380954 GGTGTAGCTAGGTCTAGGTCAAC 59.619 52.174 12.29 11.48 42.28 3.18
2851 3759 4.271661 GTGTAGCTAGGTCTAGGTCAACT 58.728 47.826 12.29 1.30 42.28 3.16
2852 3760 4.096682 GTGTAGCTAGGTCTAGGTCAACTG 59.903 50.000 12.29 0.00 42.28 3.16
2853 3761 3.741245 AGCTAGGTCTAGGTCAACTGA 57.259 47.619 4.09 0.00 39.45 3.41
2854 3762 3.626930 AGCTAGGTCTAGGTCAACTGAG 58.373 50.000 4.09 0.00 39.45 3.35
2855 3763 3.267291 AGCTAGGTCTAGGTCAACTGAGA 59.733 47.826 4.09 0.00 39.45 3.27
2856 3764 4.079443 AGCTAGGTCTAGGTCAACTGAGAT 60.079 45.833 4.09 0.00 39.45 2.75
2857 3765 4.647399 GCTAGGTCTAGGTCAACTGAGATT 59.353 45.833 7.08 0.00 33.87 2.40
2858 3766 5.128008 GCTAGGTCTAGGTCAACTGAGATTT 59.872 44.000 7.08 0.00 33.87 2.17
2859 3767 6.321690 GCTAGGTCTAGGTCAACTGAGATTTA 59.678 42.308 7.08 0.00 33.87 1.40
2860 3768 6.783708 AGGTCTAGGTCAACTGAGATTTAG 57.216 41.667 0.00 0.00 0.00 1.85
2861 3769 5.128008 AGGTCTAGGTCAACTGAGATTTAGC 59.872 44.000 0.00 0.00 0.00 3.09
2862 3770 5.353111 GTCTAGGTCAACTGAGATTTAGCC 58.647 45.833 0.00 0.00 0.00 3.93
2863 3771 5.023452 TCTAGGTCAACTGAGATTTAGCCA 58.977 41.667 0.00 0.00 0.00 4.75
2864 3772 4.640771 AGGTCAACTGAGATTTAGCCAA 57.359 40.909 0.00 0.00 0.00 4.52
2865 3773 4.583871 AGGTCAACTGAGATTTAGCCAAG 58.416 43.478 0.00 0.00 0.00 3.61
2866 3774 4.042187 AGGTCAACTGAGATTTAGCCAAGT 59.958 41.667 0.00 0.00 0.00 3.16
2867 3775 4.762251 GGTCAACTGAGATTTAGCCAAGTT 59.238 41.667 0.00 0.00 0.00 2.66
2868 3776 5.241728 GGTCAACTGAGATTTAGCCAAGTTT 59.758 40.000 0.00 0.00 0.00 2.66
2869 3777 6.374578 GTCAACTGAGATTTAGCCAAGTTTC 58.625 40.000 0.00 0.00 0.00 2.78
2870 3778 6.017109 GTCAACTGAGATTTAGCCAAGTTTCA 60.017 38.462 0.00 0.00 0.00 2.69
2871 3779 6.205464 TCAACTGAGATTTAGCCAAGTTTCAG 59.795 38.462 6.43 6.43 38.10 3.02
2872 3780 5.625150 ACTGAGATTTAGCCAAGTTTCAGT 58.375 37.500 7.52 7.52 39.50 3.41
2873 3781 5.703130 ACTGAGATTTAGCCAAGTTTCAGTC 59.297 40.000 7.52 0.00 39.91 3.51
2874 3782 5.620206 TGAGATTTAGCCAAGTTTCAGTCA 58.380 37.500 0.00 0.00 0.00 3.41
2875 3783 6.061441 TGAGATTTAGCCAAGTTTCAGTCAA 58.939 36.000 0.00 0.00 0.00 3.18
2876 3784 6.205464 TGAGATTTAGCCAAGTTTCAGTCAAG 59.795 38.462 0.00 0.00 0.00 3.02
2877 3785 6.064717 AGATTTAGCCAAGTTTCAGTCAAGT 58.935 36.000 0.00 0.00 0.00 3.16
2878 3786 5.499139 TTTAGCCAAGTTTCAGTCAAGTG 57.501 39.130 0.00 0.00 0.00 3.16
2879 3787 3.281727 AGCCAAGTTTCAGTCAAGTGA 57.718 42.857 0.00 0.00 0.00 3.41
2880 3788 2.945668 AGCCAAGTTTCAGTCAAGTGAC 59.054 45.455 3.12 3.12 45.08 3.67
2926 3834 8.914328 AAAAACAGAAAGAAATTTTTGCATGG 57.086 26.923 0.00 0.00 33.99 3.66
2927 3835 7.862512 AAACAGAAAGAAATTTTTGCATGGA 57.137 28.000 0.00 0.00 0.00 3.41
2928 3836 8.454570 AAACAGAAAGAAATTTTTGCATGGAT 57.545 26.923 0.00 0.00 0.00 3.41
2929 3837 7.662604 ACAGAAAGAAATTTTTGCATGGATC 57.337 32.000 0.00 0.00 0.00 3.36
2930 3838 7.447594 ACAGAAAGAAATTTTTGCATGGATCT 58.552 30.769 0.00 0.00 0.00 2.75
2931 3839 7.601508 ACAGAAAGAAATTTTTGCATGGATCTC 59.398 33.333 0.00 0.00 0.00 2.75
2932 3840 7.064253 CAGAAAGAAATTTTTGCATGGATCTCC 59.936 37.037 0.00 0.00 0.00 3.71
2952 3860 5.551305 TCCATGTAGGATCGAATGAACAT 57.449 39.130 0.00 0.00 43.07 2.71
2953 3861 6.664428 TCCATGTAGGATCGAATGAACATA 57.336 37.500 0.00 0.00 43.07 2.29
2954 3862 7.061566 TCCATGTAGGATCGAATGAACATAA 57.938 36.000 0.00 0.00 43.07 1.90
2955 3863 6.929049 TCCATGTAGGATCGAATGAACATAAC 59.071 38.462 0.00 0.00 43.07 1.89
2956 3864 6.705825 CCATGTAGGATCGAATGAACATAACA 59.294 38.462 0.00 0.00 41.22 2.41
2957 3865 7.388776 CCATGTAGGATCGAATGAACATAACAT 59.611 37.037 0.00 0.00 41.22 2.71
2958 3866 8.777413 CATGTAGGATCGAATGAACATAACATT 58.223 33.333 0.00 0.00 40.08 2.71
2959 3867 8.141835 TGTAGGATCGAATGAACATAACATTG 57.858 34.615 0.00 0.00 37.96 2.82
2960 3868 7.984617 TGTAGGATCGAATGAACATAACATTGA 59.015 33.333 0.00 0.00 37.96 2.57
2961 3869 7.251704 AGGATCGAATGAACATAACATTGAC 57.748 36.000 0.00 0.00 37.96 3.18
2962 3870 7.050377 AGGATCGAATGAACATAACATTGACT 58.950 34.615 0.00 0.00 37.96 3.41
2963 3871 7.011763 AGGATCGAATGAACATAACATTGACTG 59.988 37.037 0.00 0.00 37.96 3.51
2964 3872 7.011389 GGATCGAATGAACATAACATTGACTGA 59.989 37.037 0.00 0.00 37.96 3.41
2965 3873 7.294676 TCGAATGAACATAACATTGACTGAG 57.705 36.000 0.00 0.00 37.96 3.35
2966 3874 7.096551 TCGAATGAACATAACATTGACTGAGA 58.903 34.615 0.00 0.00 37.96 3.27
2967 3875 7.063426 TCGAATGAACATAACATTGACTGAGAC 59.937 37.037 0.00 0.00 37.96 3.36
2968 3876 7.148590 CGAATGAACATAACATTGACTGAGACA 60.149 37.037 0.00 0.00 37.96 3.41
2969 3877 8.571461 AATGAACATAACATTGACTGAGACAT 57.429 30.769 0.00 0.00 36.74 3.06
2970 3878 9.671279 AATGAACATAACATTGACTGAGACATA 57.329 29.630 0.00 0.00 36.74 2.29
2971 3879 9.671279 ATGAACATAACATTGACTGAGACATAA 57.329 29.630 0.00 0.00 0.00 1.90
2972 3880 8.935844 TGAACATAACATTGACTGAGACATAAC 58.064 33.333 0.00 0.00 0.00 1.89
2973 3881 7.849804 ACATAACATTGACTGAGACATAACC 57.150 36.000 0.00 0.00 0.00 2.85
2974 3882 7.394016 ACATAACATTGACTGAGACATAACCA 58.606 34.615 0.00 0.00 0.00 3.67
2975 3883 7.882791 ACATAACATTGACTGAGACATAACCAA 59.117 33.333 0.00 0.00 0.00 3.67
2976 3884 8.896744 CATAACATTGACTGAGACATAACCAAT 58.103 33.333 0.00 0.00 0.00 3.16
2977 3885 7.765695 AACATTGACTGAGACATAACCAATT 57.234 32.000 0.00 0.00 0.00 2.32
2978 3886 7.383102 ACATTGACTGAGACATAACCAATTC 57.617 36.000 0.00 0.00 0.00 2.17
2979 3887 7.170965 ACATTGACTGAGACATAACCAATTCT 58.829 34.615 0.00 0.00 0.00 2.40
2980 3888 7.335422 ACATTGACTGAGACATAACCAATTCTC 59.665 37.037 0.00 0.00 35.93 2.87
2981 3889 6.358974 TGACTGAGACATAACCAATTCTCA 57.641 37.500 0.00 0.00 41.71 3.27
2982 3890 6.768483 TGACTGAGACATAACCAATTCTCAA 58.232 36.000 2.08 0.00 42.96 3.02
2983 3891 7.397221 TGACTGAGACATAACCAATTCTCAAT 58.603 34.615 2.08 0.00 42.96 2.57
2984 3892 7.550551 TGACTGAGACATAACCAATTCTCAATC 59.449 37.037 2.73 2.73 42.96 2.67
2985 3893 6.536582 ACTGAGACATAACCAATTCTCAATCG 59.463 38.462 2.08 0.00 42.96 3.34
2986 3894 6.639563 TGAGACATAACCAATTCTCAATCGA 58.360 36.000 0.00 0.00 41.16 3.59
2987 3895 6.535150 TGAGACATAACCAATTCTCAATCGAC 59.465 38.462 0.00 0.00 41.16 4.20
2988 3896 6.644347 AGACATAACCAATTCTCAATCGACT 58.356 36.000 0.00 0.00 0.00 4.18
2989 3897 6.536582 AGACATAACCAATTCTCAATCGACTG 59.463 38.462 0.00 0.00 0.00 3.51
2990 3898 6.406370 ACATAACCAATTCTCAATCGACTGA 58.594 36.000 0.00 0.00 0.00 3.41
2991 3899 6.536582 ACATAACCAATTCTCAATCGACTGAG 59.463 38.462 17.55 17.55 43.62 3.35
2997 3905 2.010497 TCTCAATCGACTGAGACTCGG 58.990 52.381 21.83 9.88 45.45 4.63
2998 3906 1.740585 CTCAATCGACTGAGACTCGGT 59.259 52.381 18.76 17.02 44.82 4.69
2999 3907 2.937149 CTCAATCGACTGAGACTCGGTA 59.063 50.000 18.76 3.09 44.82 4.02
3000 3908 3.340928 TCAATCGACTGAGACTCGGTAA 58.659 45.455 17.02 8.95 35.83 2.85
3001 3909 3.754850 TCAATCGACTGAGACTCGGTAAA 59.245 43.478 17.02 8.60 35.83 2.01
3002 3910 4.216902 TCAATCGACTGAGACTCGGTAAAA 59.783 41.667 17.02 6.18 35.83 1.52
3003 3911 3.549299 TCGACTGAGACTCGGTAAAAC 57.451 47.619 17.02 4.02 35.83 2.43
3004 3912 3.144506 TCGACTGAGACTCGGTAAAACT 58.855 45.455 17.02 0.00 35.83 2.66
3005 3913 3.058432 TCGACTGAGACTCGGTAAAACTG 60.058 47.826 17.02 3.93 35.83 3.16
3006 3914 3.304525 CGACTGAGACTCGGTAAAACTGT 60.305 47.826 17.02 0.00 35.83 3.55
3009 3917 3.973657 TGAGACTCGGTAAAACTGTCAC 58.026 45.455 0.00 0.00 0.00 3.67
3011 3925 4.228317 GAGACTCGGTAAAACTGTCACTC 58.772 47.826 0.00 0.00 0.00 3.51
3031 3959 6.923508 TCACTCTAATAACAAGATATGTGGCG 59.076 38.462 0.00 0.00 42.99 5.69
3034 3962 8.150945 ACTCTAATAACAAGATATGTGGCGAAT 58.849 33.333 0.00 0.00 42.99 3.34
3308 4256 8.495361 ACTACTGTTATTAACACAAACACACA 57.505 30.769 5.14 0.00 36.25 3.72
3309 4257 8.392612 ACTACTGTTATTAACACAAACACACAC 58.607 33.333 5.14 0.00 36.25 3.82
3310 4258 6.252281 ACTGTTATTAACACAAACACACACG 58.748 36.000 5.14 0.00 36.25 4.49
3311 4259 6.092396 ACTGTTATTAACACAAACACACACGA 59.908 34.615 5.14 0.00 36.25 4.35
3312 4260 7.017498 TGTTATTAACACAAACACACACGAT 57.983 32.000 5.14 0.00 36.25 3.73
3313 4261 6.907748 TGTTATTAACACAAACACACACGATG 59.092 34.615 5.14 0.00 36.25 3.84
3314 4262 5.743026 ATTAACACAAACACACACGATGA 57.257 34.783 0.00 0.00 0.00 2.92
3315 4263 5.743026 TTAACACAAACACACACGATGAT 57.257 34.783 0.00 0.00 0.00 2.45
3316 4264 3.878086 ACACAAACACACACGATGATC 57.122 42.857 0.00 0.00 0.00 2.92
3317 4265 2.548057 ACACAAACACACACGATGATCC 59.452 45.455 0.00 0.00 0.00 3.36
3318 4266 2.807967 CACAAACACACACGATGATCCT 59.192 45.455 0.00 0.00 0.00 3.24
3321 4269 3.401033 AACACACACGATGATCCTTCA 57.599 42.857 0.00 0.00 36.00 3.02
3392 4345 3.006940 TGAACCACGCCTTCATACAATC 58.993 45.455 0.00 0.00 0.00 2.67
3433 4401 9.184523 TGGTTTGTAATATGCTTAGCAAGTTAT 57.815 29.630 12.08 1.67 43.62 1.89
3482 4450 0.878416 CCAATCTTTTTGACGCCGGA 59.122 50.000 5.05 0.00 0.00 5.14
3484 4452 2.094752 CCAATCTTTTTGACGCCGGATT 60.095 45.455 5.05 0.00 0.00 3.01
3485 4453 2.916716 CAATCTTTTTGACGCCGGATTG 59.083 45.455 5.05 0.00 35.74 2.67
3531 4508 3.605634 TGAGTTGGGGACATTGTAATCG 58.394 45.455 0.00 0.00 42.32 3.34
3569 4546 7.087639 TGGCAAGTAAATCGATTAGGTTTTTG 58.912 34.615 11.83 11.06 34.50 2.44
3570 4547 6.034577 GGCAAGTAAATCGATTAGGTTTTTGC 59.965 38.462 11.83 18.45 42.00 3.68
3621 4605 3.478857 AATGTGTTCTCCGTGTTACCA 57.521 42.857 0.00 0.00 0.00 3.25
3626 4610 4.000988 GTGTTCTCCGTGTTACCAATGAT 58.999 43.478 0.00 0.00 0.00 2.45
3627 4611 4.000325 TGTTCTCCGTGTTACCAATGATG 59.000 43.478 0.00 0.00 0.00 3.07
3645 4629 2.543777 TGAACAAGTCCCTTCTTCGG 57.456 50.000 0.00 0.00 0.00 4.30
3649 4633 3.570912 ACAAGTCCCTTCTTCGGAAAA 57.429 42.857 0.00 0.00 33.12 2.29
3676 4660 7.924103 AATAACAAACATTTTCGGAGAACAC 57.076 32.000 0.00 0.00 45.90 3.32
3831 4815 8.178313 GGAACATTTTTGAATTTCCGAACAAAA 58.822 29.630 0.00 0.00 39.38 2.44
3841 4825 6.850752 ATTTCCGAACAAAATCCAATAGGT 57.149 33.333 0.00 0.00 35.89 3.08
3844 4828 3.425404 CGAACAAAATCCAATAGGTGCG 58.575 45.455 0.00 0.00 35.89 5.34
3845 4829 3.126171 CGAACAAAATCCAATAGGTGCGA 59.874 43.478 0.00 0.00 35.89 5.10
3847 4831 2.423538 ACAAAATCCAATAGGTGCGAGC 59.576 45.455 0.00 0.00 35.89 5.03
3848 4832 2.418368 AAATCCAATAGGTGCGAGCA 57.582 45.000 0.00 0.00 35.89 4.26
3849 4833 2.645838 AATCCAATAGGTGCGAGCAT 57.354 45.000 0.00 0.00 35.89 3.79
3852 4843 1.065491 TCCAATAGGTGCGAGCATTGT 60.065 47.619 0.00 0.00 35.89 2.71
3855 4846 0.175760 ATAGGTGCGAGCATTGTCGT 59.824 50.000 0.00 0.00 42.17 4.34
3893 4884 4.588951 AGGCCCGAGAATTTTTCTTTCTTT 59.411 37.500 0.00 0.00 40.87 2.52
4257 5256 2.578713 CTACACGGGCACGCTACG 60.579 66.667 9.12 0.00 46.04 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.340814 AGAGGAAGCACTACATTGTGG 57.659 47.619 0.00 0.00 38.31 4.17
1 2 5.053145 GGATAGAGGAAGCACTACATTGTG 58.947 45.833 0.00 0.00 40.62 3.33
2 3 4.965532 AGGATAGAGGAAGCACTACATTGT 59.034 41.667 0.00 0.00 0.00 2.71
3 4 5.537188 GAGGATAGAGGAAGCACTACATTG 58.463 45.833 0.00 0.00 0.00 2.82
4 5 4.279671 CGAGGATAGAGGAAGCACTACATT 59.720 45.833 0.00 0.00 0.00 2.71
5 6 3.823873 CGAGGATAGAGGAAGCACTACAT 59.176 47.826 0.00 0.00 0.00 2.29
6 7 3.215151 CGAGGATAGAGGAAGCACTACA 58.785 50.000 0.00 0.00 0.00 2.74
7 8 3.003897 CACGAGGATAGAGGAAGCACTAC 59.996 52.174 0.00 0.00 0.00 2.73
8 9 3.215151 CACGAGGATAGAGGAAGCACTA 58.785 50.000 0.00 0.00 0.00 2.74
9 10 2.028130 CACGAGGATAGAGGAAGCACT 58.972 52.381 0.00 0.00 0.00 4.40
10 11 1.537135 GCACGAGGATAGAGGAAGCAC 60.537 57.143 0.00 0.00 0.00 4.40
11 12 0.747255 GCACGAGGATAGAGGAAGCA 59.253 55.000 0.00 0.00 0.00 3.91
12 13 1.036707 AGCACGAGGATAGAGGAAGC 58.963 55.000 0.00 0.00 0.00 3.86
13 14 2.690497 TGAAGCACGAGGATAGAGGAAG 59.310 50.000 0.00 0.00 0.00 3.46
14 15 2.735151 TGAAGCACGAGGATAGAGGAA 58.265 47.619 0.00 0.00 0.00 3.36
15 16 2.427453 GTTGAAGCACGAGGATAGAGGA 59.573 50.000 0.00 0.00 0.00 3.71
16 17 2.428890 AGTTGAAGCACGAGGATAGAGG 59.571 50.000 0.00 0.00 0.00 3.69
17 18 3.791973 AGTTGAAGCACGAGGATAGAG 57.208 47.619 0.00 0.00 0.00 2.43
18 19 4.021456 TCAAAGTTGAAGCACGAGGATAGA 60.021 41.667 0.00 0.00 33.55 1.98
19 20 4.092091 GTCAAAGTTGAAGCACGAGGATAG 59.908 45.833 0.00 0.00 39.21 2.08
20 21 3.994392 GTCAAAGTTGAAGCACGAGGATA 59.006 43.478 0.00 0.00 39.21 2.59
21 22 2.808543 GTCAAAGTTGAAGCACGAGGAT 59.191 45.455 0.00 0.00 39.21 3.24
22 23 2.210116 GTCAAAGTTGAAGCACGAGGA 58.790 47.619 0.00 0.00 39.21 3.71
23 24 1.264288 GGTCAAAGTTGAAGCACGAGG 59.736 52.381 0.00 0.00 39.21 4.63
24 25 1.070577 CGGTCAAAGTTGAAGCACGAG 60.071 52.381 0.00 0.00 39.21 4.18
25 26 0.934496 CGGTCAAAGTTGAAGCACGA 59.066 50.000 0.00 0.00 39.21 4.35
26 27 0.655733 ACGGTCAAAGTTGAAGCACG 59.344 50.000 0.00 2.00 39.21 5.34
27 28 3.955771 TTACGGTCAAAGTTGAAGCAC 57.044 42.857 0.00 0.00 39.21 4.40
28 29 5.508200 AATTTACGGTCAAAGTTGAAGCA 57.492 34.783 0.00 0.00 39.21 3.91
29 30 7.646526 AGTTTAATTTACGGTCAAAGTTGAAGC 59.353 33.333 0.00 0.00 39.21 3.86
31 32 9.934190 GTAGTTTAATTTACGGTCAAAGTTGAA 57.066 29.630 0.00 0.00 39.21 2.69
32 33 8.558700 GGTAGTTTAATTTACGGTCAAAGTTGA 58.441 33.333 0.00 0.00 34.20 3.18
33 34 8.344098 TGGTAGTTTAATTTACGGTCAAAGTTG 58.656 33.333 0.00 0.00 0.00 3.16
34 35 8.449251 TGGTAGTTTAATTTACGGTCAAAGTT 57.551 30.769 0.00 0.00 0.00 2.66
35 36 8.449251 TTGGTAGTTTAATTTACGGTCAAAGT 57.551 30.769 0.00 0.00 0.00 2.66
36 37 8.776470 TCTTGGTAGTTTAATTTACGGTCAAAG 58.224 33.333 0.00 0.00 0.00 2.77
37 38 8.558700 GTCTTGGTAGTTTAATTTACGGTCAAA 58.441 33.333 0.00 0.00 0.00 2.69
38 39 7.173047 GGTCTTGGTAGTTTAATTTACGGTCAA 59.827 37.037 0.00 0.00 0.00 3.18
39 40 6.650390 GGTCTTGGTAGTTTAATTTACGGTCA 59.350 38.462 0.00 0.00 0.00 4.02
40 41 6.183360 CGGTCTTGGTAGTTTAATTTACGGTC 60.183 42.308 0.00 0.00 0.00 4.79
41 42 5.639082 CGGTCTTGGTAGTTTAATTTACGGT 59.361 40.000 0.00 0.00 0.00 4.83
42 43 5.868801 TCGGTCTTGGTAGTTTAATTTACGG 59.131 40.000 0.00 0.00 0.00 4.02
43 44 6.949578 TCGGTCTTGGTAGTTTAATTTACG 57.050 37.500 0.00 0.00 0.00 3.18
44 45 7.695201 GCAATCGGTCTTGGTAGTTTAATTTAC 59.305 37.037 0.00 0.00 0.00 2.01
45 46 7.413219 CGCAATCGGTCTTGGTAGTTTAATTTA 60.413 37.037 0.00 0.00 0.00 1.40
46 47 6.617879 GCAATCGGTCTTGGTAGTTTAATTT 58.382 36.000 0.00 0.00 0.00 1.82
47 48 5.163794 CGCAATCGGTCTTGGTAGTTTAATT 60.164 40.000 0.00 0.00 0.00 1.40
48 49 4.331717 CGCAATCGGTCTTGGTAGTTTAAT 59.668 41.667 0.00 0.00 0.00 1.40
49 50 3.680937 CGCAATCGGTCTTGGTAGTTTAA 59.319 43.478 0.00 0.00 0.00 1.52
50 51 3.255725 CGCAATCGGTCTTGGTAGTTTA 58.744 45.455 0.00 0.00 0.00 2.01
51 52 2.073816 CGCAATCGGTCTTGGTAGTTT 58.926 47.619 0.00 0.00 0.00 2.66
52 53 1.722011 CGCAATCGGTCTTGGTAGTT 58.278 50.000 0.00 0.00 0.00 2.24
53 54 3.436001 CGCAATCGGTCTTGGTAGT 57.564 52.632 0.00 0.00 0.00 2.73
65 66 2.485188 TTTTTGCTCCCGCCGCAATC 62.485 55.000 5.33 0.00 45.67 2.67
66 67 1.887344 ATTTTTGCTCCCGCCGCAAT 61.887 50.000 5.33 0.00 45.67 3.56
67 68 2.093537 AATTTTTGCTCCCGCCGCAA 62.094 50.000 0.00 0.00 44.83 4.85
68 69 1.244697 TAATTTTTGCTCCCGCCGCA 61.245 50.000 0.00 0.00 35.22 5.69
69 70 0.102300 ATAATTTTTGCTCCCGCCGC 59.898 50.000 0.00 0.00 34.43 6.53
70 71 3.252215 TGATATAATTTTTGCTCCCGCCG 59.748 43.478 0.00 0.00 34.43 6.46
71 72 4.278419 ACTGATATAATTTTTGCTCCCGCC 59.722 41.667 0.00 0.00 34.43 6.13
72 73 5.438761 ACTGATATAATTTTTGCTCCCGC 57.561 39.130 0.00 0.00 0.00 6.13
73 74 9.965824 AATTTACTGATATAATTTTTGCTCCCG 57.034 29.630 0.00 0.00 0.00 5.14
131 132 1.527380 AACTGCGGCGGGAGAAAAA 60.527 52.632 19.55 0.00 35.29 1.94
132 133 2.112297 AACTGCGGCGGGAGAAAA 59.888 55.556 19.55 0.00 35.29 2.29
133 134 2.668212 CAACTGCGGCGGGAGAAA 60.668 61.111 19.55 0.00 35.29 2.52
134 135 4.697756 CCAACTGCGGCGGGAGAA 62.698 66.667 19.55 0.00 35.29 2.87
140 141 3.883744 AAGGAGACCAACTGCGGCG 62.884 63.158 0.51 0.51 41.86 6.46
141 142 2.032681 AAGGAGACCAACTGCGGC 59.967 61.111 0.00 0.00 41.86 6.53
142 143 1.672356 CCAAGGAGACCAACTGCGG 60.672 63.158 0.00 0.00 41.86 5.69
143 144 0.535102 AACCAAGGAGACCAACTGCG 60.535 55.000 0.00 0.00 41.86 5.18
144 145 2.561478 TAACCAAGGAGACCAACTGC 57.439 50.000 0.00 0.00 37.22 4.40
145 146 6.405278 AAATTTAACCAAGGAGACCAACTG 57.595 37.500 0.00 0.00 0.00 3.16
146 147 7.178451 CCATAAATTTAACCAAGGAGACCAACT 59.822 37.037 1.21 0.00 0.00 3.16
147 148 7.039293 ACCATAAATTTAACCAAGGAGACCAAC 60.039 37.037 1.21 0.00 0.00 3.77
148 149 7.013834 ACCATAAATTTAACCAAGGAGACCAA 58.986 34.615 1.21 0.00 0.00 3.67
149 150 6.557568 ACCATAAATTTAACCAAGGAGACCA 58.442 36.000 1.21 0.00 0.00 4.02
150 151 6.661805 TGACCATAAATTTAACCAAGGAGACC 59.338 38.462 1.21 0.00 0.00 3.85
151 152 7.696992 TGACCATAAATTTAACCAAGGAGAC 57.303 36.000 1.21 0.34 0.00 3.36
152 153 8.713708 TTTGACCATAAATTTAACCAAGGAGA 57.286 30.769 1.21 0.00 0.00 3.71
153 154 8.585018 ACTTTGACCATAAATTTAACCAAGGAG 58.415 33.333 1.21 3.35 0.00 3.69
154 155 8.485578 ACTTTGACCATAAATTTAACCAAGGA 57.514 30.769 1.21 0.00 0.00 3.36
155 156 8.987890 CAACTTTGACCATAAATTTAACCAAGG 58.012 33.333 1.21 7.21 0.00 3.61
156 157 8.987890 CCAACTTTGACCATAAATTTAACCAAG 58.012 33.333 1.21 5.15 0.00 3.61
157 158 8.705594 TCCAACTTTGACCATAAATTTAACCAA 58.294 29.630 1.21 2.19 0.00 3.67
158 159 8.145122 GTCCAACTTTGACCATAAATTTAACCA 58.855 33.333 1.21 0.00 0.00 3.67
159 160 7.601130 GGTCCAACTTTGACCATAAATTTAACC 59.399 37.037 1.21 0.00 38.76 2.85
160 161 8.364894 AGGTCCAACTTTGACCATAAATTTAAC 58.635 33.333 13.24 0.00 41.22 2.01
161 162 8.485578 AGGTCCAACTTTGACCATAAATTTAA 57.514 30.769 13.24 0.00 41.22 1.52
162 163 7.094549 CGAGGTCCAACTTTGACCATAAATTTA 60.095 37.037 13.24 0.00 41.22 1.40
163 164 6.294508 CGAGGTCCAACTTTGACCATAAATTT 60.295 38.462 13.24 0.00 41.22 1.82
164 165 5.183140 CGAGGTCCAACTTTGACCATAAATT 59.817 40.000 13.24 0.00 41.22 1.82
165 166 4.700213 CGAGGTCCAACTTTGACCATAAAT 59.300 41.667 13.24 0.00 41.22 1.40
166 167 4.069304 CGAGGTCCAACTTTGACCATAAA 58.931 43.478 13.24 0.00 41.22 1.40
167 168 3.558321 CCGAGGTCCAACTTTGACCATAA 60.558 47.826 13.24 0.00 41.22 1.90
168 169 2.027561 CCGAGGTCCAACTTTGACCATA 60.028 50.000 13.24 0.00 41.22 2.74
169 170 1.271379 CCGAGGTCCAACTTTGACCAT 60.271 52.381 13.24 0.72 41.22 3.55
170 171 0.107831 CCGAGGTCCAACTTTGACCA 59.892 55.000 13.24 0.00 41.22 4.02
171 172 0.605589 CCCGAGGTCCAACTTTGACC 60.606 60.000 4.16 4.16 39.18 4.02
172 173 0.395312 TCCCGAGGTCCAACTTTGAC 59.605 55.000 0.00 0.00 0.00 3.18
173 174 1.071699 CTTCCCGAGGTCCAACTTTGA 59.928 52.381 0.00 0.00 0.00 2.69
174 175 1.523758 CTTCCCGAGGTCCAACTTTG 58.476 55.000 0.00 0.00 0.00 2.77
175 176 0.250770 GCTTCCCGAGGTCCAACTTT 60.251 55.000 0.00 0.00 0.00 2.66
176 177 1.375326 GCTTCCCGAGGTCCAACTT 59.625 57.895 0.00 0.00 0.00 2.66
177 178 2.943978 CGCTTCCCGAGGTCCAACT 61.944 63.158 0.00 0.00 40.02 3.16
178 179 2.434359 CGCTTCCCGAGGTCCAAC 60.434 66.667 0.00 0.00 40.02 3.77
179 180 4.388499 GCGCTTCCCGAGGTCCAA 62.388 66.667 0.00 0.00 40.02 3.53
194 195 1.070843 CCAAAATATAGTGCGTCCGCG 60.071 52.381 7.22 0.00 45.51 6.46
195 196 2.206750 TCCAAAATATAGTGCGTCCGC 58.793 47.619 4.42 4.42 42.35 5.54
196 197 4.319477 CCATTCCAAAATATAGTGCGTCCG 60.319 45.833 0.00 0.00 0.00 4.79
197 198 4.819630 TCCATTCCAAAATATAGTGCGTCC 59.180 41.667 0.00 0.00 0.00 4.79
198 199 5.527582 ACTCCATTCCAAAATATAGTGCGTC 59.472 40.000 0.00 0.00 0.00 5.19
199 200 5.296780 CACTCCATTCCAAAATATAGTGCGT 59.703 40.000 0.00 0.00 33.55 5.24
200 201 5.527214 TCACTCCATTCCAAAATATAGTGCG 59.473 40.000 0.00 0.00 37.06 5.34
201 202 6.543831 ACTCACTCCATTCCAAAATATAGTGC 59.456 38.462 0.00 0.00 37.06 4.40
202 203 9.784531 ATACTCACTCCATTCCAAAATATAGTG 57.215 33.333 0.00 0.00 37.74 2.74
203 204 9.784531 CATACTCACTCCATTCCAAAATATAGT 57.215 33.333 0.00 0.00 0.00 2.12
204 205 9.224267 CCATACTCACTCCATTCCAAAATATAG 57.776 37.037 0.00 0.00 0.00 1.31
205 206 8.163408 CCCATACTCACTCCATTCCAAAATATA 58.837 37.037 0.00 0.00 0.00 0.86
206 207 7.006509 CCCATACTCACTCCATTCCAAAATAT 58.993 38.462 0.00 0.00 0.00 1.28
207 208 6.159575 TCCCATACTCACTCCATTCCAAAATA 59.840 38.462 0.00 0.00 0.00 1.40
208 209 5.044179 TCCCATACTCACTCCATTCCAAAAT 60.044 40.000 0.00 0.00 0.00 1.82
209 210 4.290985 TCCCATACTCACTCCATTCCAAAA 59.709 41.667 0.00 0.00 0.00 2.44
210 211 3.849574 TCCCATACTCACTCCATTCCAAA 59.150 43.478 0.00 0.00 0.00 3.28
211 212 3.199946 GTCCCATACTCACTCCATTCCAA 59.800 47.826 0.00 0.00 0.00 3.53
212 213 2.771943 GTCCCATACTCACTCCATTCCA 59.228 50.000 0.00 0.00 0.00 3.53
213 214 2.771943 TGTCCCATACTCACTCCATTCC 59.228 50.000 0.00 0.00 0.00 3.01
214 215 4.384056 CATGTCCCATACTCACTCCATTC 58.616 47.826 0.00 0.00 0.00 2.67
215 216 3.434167 GCATGTCCCATACTCACTCCATT 60.434 47.826 0.00 0.00 0.00 3.16
216 217 2.105477 GCATGTCCCATACTCACTCCAT 59.895 50.000 0.00 0.00 0.00 3.41
217 218 1.486310 GCATGTCCCATACTCACTCCA 59.514 52.381 0.00 0.00 0.00 3.86
218 219 1.765314 AGCATGTCCCATACTCACTCC 59.235 52.381 0.00 0.00 0.00 3.85
219 220 3.462021 GAAGCATGTCCCATACTCACTC 58.538 50.000 0.00 0.00 0.00 3.51
220 221 2.171448 GGAAGCATGTCCCATACTCACT 59.829 50.000 0.00 0.00 0.00 3.41
221 222 2.092968 TGGAAGCATGTCCCATACTCAC 60.093 50.000 0.15 0.00 36.80 3.51
222 223 2.092968 GTGGAAGCATGTCCCATACTCA 60.093 50.000 6.22 0.00 36.80 3.41
223 224 2.092968 TGTGGAAGCATGTCCCATACTC 60.093 50.000 6.22 0.00 36.80 2.59
224 225 1.915489 TGTGGAAGCATGTCCCATACT 59.085 47.619 6.22 0.00 36.80 2.12
225 226 2.017049 GTGTGGAAGCATGTCCCATAC 58.983 52.381 11.73 11.73 36.80 2.39
226 227 1.915489 AGTGTGGAAGCATGTCCCATA 59.085 47.619 6.22 1.94 36.80 2.74
227 228 0.700564 AGTGTGGAAGCATGTCCCAT 59.299 50.000 6.22 0.00 36.80 4.00
228 229 0.250858 CAGTGTGGAAGCATGTCCCA 60.251 55.000 0.15 0.00 36.80 4.37
229 230 0.250901 ACAGTGTGGAAGCATGTCCC 60.251 55.000 0.00 0.00 36.80 4.46
230 231 2.472695 TACAGTGTGGAAGCATGTCC 57.527 50.000 5.88 0.00 38.27 4.02
231 232 6.369890 CCATATATACAGTGTGGAAGCATGTC 59.630 42.308 5.88 0.00 31.59 3.06
232 233 6.233434 CCATATATACAGTGTGGAAGCATGT 58.767 40.000 5.88 0.00 31.59 3.21
233 234 5.122869 GCCATATATACAGTGTGGAAGCATG 59.877 44.000 5.88 2.23 31.59 4.06
234 235 5.221904 TGCCATATATACAGTGTGGAAGCAT 60.222 40.000 5.88 0.00 31.59 3.79
235 236 4.102367 TGCCATATATACAGTGTGGAAGCA 59.898 41.667 5.88 3.21 31.59 3.91
236 237 4.452455 GTGCCATATATACAGTGTGGAAGC 59.548 45.833 5.88 0.52 31.59 3.86
237 238 5.698089 CAGTGCCATATATACAGTGTGGAAG 59.302 44.000 5.88 0.00 31.51 3.46
238 239 5.130311 ACAGTGCCATATATACAGTGTGGAA 59.870 40.000 19.95 0.00 44.21 3.53
239 240 4.653801 ACAGTGCCATATATACAGTGTGGA 59.346 41.667 19.95 0.00 44.21 4.02
240 241 4.960938 ACAGTGCCATATATACAGTGTGG 58.039 43.478 19.95 0.00 44.21 4.17
241 242 6.749139 ACTACAGTGCCATATATACAGTGTG 58.251 40.000 25.00 19.58 45.18 3.82
242 243 6.978674 ACTACAGTGCCATATATACAGTGT 57.021 37.500 22.39 22.39 46.70 3.55
243 244 9.929180 ATAAACTACAGTGCCATATATACAGTG 57.071 33.333 16.02 16.02 39.97 3.66
254 255 9.169592 GGAAACTATTTATAAACTACAGTGCCA 57.830 33.333 0.00 0.00 0.00 4.92
255 256 9.392259 AGGAAACTATTTATAAACTACAGTGCC 57.608 33.333 0.00 7.33 40.61 5.01
270 271 9.226606 TGATCATGTTTACGAAGGAAACTATTT 57.773 29.630 9.02 0.00 42.68 1.40
271 272 8.786826 TGATCATGTTTACGAAGGAAACTATT 57.213 30.769 9.02 0.00 42.68 1.73
272 273 8.786826 TTGATCATGTTTACGAAGGAAACTAT 57.213 30.769 9.02 1.45 42.68 2.12
273 274 8.610248 TTTGATCATGTTTACGAAGGAAACTA 57.390 30.769 9.02 0.00 42.68 2.24
275 276 7.360361 ACTTTGATCATGTTTACGAAGGAAAC 58.640 34.615 0.00 1.16 37.32 2.78
276 277 7.504924 ACTTTGATCATGTTTACGAAGGAAA 57.495 32.000 0.00 0.00 0.00 3.13
277 278 7.227711 TGAACTTTGATCATGTTTACGAAGGAA 59.772 33.333 13.50 0.00 0.00 3.36
278 279 6.708502 TGAACTTTGATCATGTTTACGAAGGA 59.291 34.615 13.50 0.00 0.00 3.36
279 280 6.898041 TGAACTTTGATCATGTTTACGAAGG 58.102 36.000 13.50 0.00 0.00 3.46
283 284 9.825972 ACTTTATGAACTTTGATCATGTTTACG 57.174 29.630 13.50 0.00 38.01 3.18
326 327 9.010029 CCCATCTGTTTTGTAGTGTTTATAACT 57.990 33.333 0.00 0.00 0.00 2.24
327 328 9.005777 TCCCATCTGTTTTGTAGTGTTTATAAC 57.994 33.333 0.00 0.00 0.00 1.89
328 329 9.747898 ATCCCATCTGTTTTGTAGTGTTTATAA 57.252 29.630 0.00 0.00 0.00 0.98
329 330 9.747898 AATCCCATCTGTTTTGTAGTGTTTATA 57.252 29.630 0.00 0.00 0.00 0.98
330 331 8.522830 CAATCCCATCTGTTTTGTAGTGTTTAT 58.477 33.333 0.00 0.00 0.00 1.40
331 332 7.504238 ACAATCCCATCTGTTTTGTAGTGTTTA 59.496 33.333 0.00 0.00 0.00 2.01
332 333 6.323739 ACAATCCCATCTGTTTTGTAGTGTTT 59.676 34.615 0.00 0.00 0.00 2.83
333 334 5.833131 ACAATCCCATCTGTTTTGTAGTGTT 59.167 36.000 0.00 0.00 0.00 3.32
334 335 5.385198 ACAATCCCATCTGTTTTGTAGTGT 58.615 37.500 0.00 0.00 0.00 3.55
335 336 5.964958 ACAATCCCATCTGTTTTGTAGTG 57.035 39.130 0.00 0.00 0.00 2.74
336 337 6.180472 CCTACAATCCCATCTGTTTTGTAGT 58.820 40.000 15.84 0.00 44.00 2.73
337 338 6.180472 ACCTACAATCCCATCTGTTTTGTAG 58.820 40.000 12.07 12.07 44.61 2.74
338 339 6.134535 ACCTACAATCCCATCTGTTTTGTA 57.865 37.500 0.00 0.00 33.03 2.41
339 340 4.998051 ACCTACAATCCCATCTGTTTTGT 58.002 39.130 0.00 0.00 35.00 2.83
340 341 8.746052 TTATACCTACAATCCCATCTGTTTTG 57.254 34.615 0.00 0.00 0.00 2.44
341 342 9.936329 AATTATACCTACAATCCCATCTGTTTT 57.064 29.630 0.00 0.00 0.00 2.43
342 343 9.936329 AAATTATACCTACAATCCCATCTGTTT 57.064 29.630 0.00 0.00 0.00 2.83
343 344 9.936329 AAAATTATACCTACAATCCCATCTGTT 57.064 29.630 0.00 0.00 0.00 3.16
344 345 9.936329 AAAAATTATACCTACAATCCCATCTGT 57.064 29.630 0.00 0.00 0.00 3.41
433 434 1.516365 TAGAGGATAGCGGCGCACTC 61.516 60.000 35.02 29.94 0.00 3.51
445 446 3.353557 TCTTGTACGCACAGTAGAGGAT 58.646 45.455 0.00 0.00 35.67 3.24
451 452 8.312896 TCAATATTTTTCTTGTACGCACAGTA 57.687 30.769 0.00 0.00 35.67 2.74
492 493 2.617250 AAAGCACATACACACATGCG 57.383 45.000 0.00 0.00 42.98 4.73
561 562 8.888579 ATATGTTATCACCTTCTTCTTAACCG 57.111 34.615 0.00 0.00 0.00 4.44
625 627 2.357593 CTGGTGGGTTTGTGAGGGCT 62.358 60.000 0.00 0.00 0.00 5.19
633 642 1.684386 TTGCTTGCCTGGTGGGTTTG 61.684 55.000 0.00 0.00 37.43 2.93
644 653 0.668401 GAACACATGCCTTGCTTGCC 60.668 55.000 0.00 0.00 37.23 4.52
671 685 1.017387 GCTTTGATGGGAAGGTAGCG 58.983 55.000 0.00 0.00 0.00 4.26
718 891 3.740780 AGGAAGGAAGGATGAATGGAGA 58.259 45.455 0.00 0.00 0.00 3.71
719 892 4.459330 GAAGGAAGGAAGGATGAATGGAG 58.541 47.826 0.00 0.00 0.00 3.86
725 915 2.359376 TGGGAAGGAAGGAAGGATGA 57.641 50.000 0.00 0.00 0.00 2.92
727 917 2.713708 GCTATGGGAAGGAAGGAAGGAT 59.286 50.000 0.00 0.00 0.00 3.24
753 943 5.103728 TGGGTGGCCTATGATCTATGAAAAA 60.104 40.000 3.32 0.00 0.00 1.94
754 944 4.415179 TGGGTGGCCTATGATCTATGAAAA 59.585 41.667 3.32 0.00 0.00 2.29
755 945 3.980022 TGGGTGGCCTATGATCTATGAAA 59.020 43.478 3.32 0.00 0.00 2.69
756 946 3.327757 GTGGGTGGCCTATGATCTATGAA 59.672 47.826 3.32 0.00 0.00 2.57
760 950 1.729586 GGTGGGTGGCCTATGATCTA 58.270 55.000 3.32 0.00 0.00 1.98
761 951 1.410850 CGGTGGGTGGCCTATGATCT 61.411 60.000 3.32 0.00 0.00 2.75
762 952 1.071471 CGGTGGGTGGCCTATGATC 59.929 63.158 3.32 0.00 0.00 2.92
827 1045 4.681074 ACTACTCCTACTACGAGGGTAC 57.319 50.000 0.00 0.00 37.20 3.34
828 1046 5.459505 ACTACTACTCCTACTACGAGGGTA 58.540 45.833 0.00 0.00 37.20 3.69
829 1047 4.294347 ACTACTACTCCTACTACGAGGGT 58.706 47.826 0.00 0.00 37.20 4.34
832 1050 7.978975 ACAACTTACTACTACTCCTACTACGAG 59.021 40.741 0.00 0.00 0.00 4.18
834 1052 9.587772 TTACAACTTACTACTACTCCTACTACG 57.412 37.037 0.00 0.00 0.00 3.51
837 1055 9.625747 GGATTACAACTTACTACTACTCCTACT 57.374 37.037 0.00 0.00 0.00 2.57
838 1056 9.401058 TGGATTACAACTTACTACTACTCCTAC 57.599 37.037 0.00 0.00 0.00 3.18
840 1058 8.915036 CATGGATTACAACTTACTACTACTCCT 58.085 37.037 0.00 0.00 0.00 3.69
841 1059 8.693625 ACATGGATTACAACTTACTACTACTCC 58.306 37.037 0.00 0.00 0.00 3.85
842 1060 9.517609 CACATGGATTACAACTTACTACTACTC 57.482 37.037 0.00 0.00 0.00 2.59
856 1074 0.625316 AGCAGGGCACATGGATTACA 59.375 50.000 0.00 0.00 0.00 2.41
871 1089 8.709308 AGTGCTTAGGGGATTATTATATAGCAG 58.291 37.037 0.00 0.00 35.80 4.24
882 1100 6.408206 GCTAAAAGAGAGTGCTTAGGGGATTA 60.408 42.308 0.00 0.00 0.00 1.75
885 1103 3.197983 GCTAAAAGAGAGTGCTTAGGGGA 59.802 47.826 0.00 0.00 0.00 4.81
886 1104 3.536570 GCTAAAAGAGAGTGCTTAGGGG 58.463 50.000 0.00 0.00 0.00 4.79
887 1105 3.536570 GGCTAAAAGAGAGTGCTTAGGG 58.463 50.000 0.00 0.00 0.00 3.53
888 1106 3.190874 CGGCTAAAAGAGAGTGCTTAGG 58.809 50.000 0.00 0.00 0.00 2.69
889 1107 3.851098 ACGGCTAAAAGAGAGTGCTTAG 58.149 45.455 0.00 0.00 0.00 2.18
890 1108 3.368116 GGACGGCTAAAAGAGAGTGCTTA 60.368 47.826 0.00 0.00 0.00 3.09
891 1109 2.613223 GGACGGCTAAAAGAGAGTGCTT 60.613 50.000 0.00 0.00 0.00 3.91
892 1110 1.066787 GGACGGCTAAAAGAGAGTGCT 60.067 52.381 0.00 0.00 0.00 4.40
893 1111 1.337823 TGGACGGCTAAAAGAGAGTGC 60.338 52.381 0.00 0.00 0.00 4.40
894 1112 2.743636 TGGACGGCTAAAAGAGAGTG 57.256 50.000 0.00 0.00 0.00 3.51
895 1113 3.600388 CATTGGACGGCTAAAAGAGAGT 58.400 45.455 0.00 0.00 0.00 3.24
896 1114 2.352960 GCATTGGACGGCTAAAAGAGAG 59.647 50.000 0.00 0.00 0.00 3.20
897 1115 2.356135 GCATTGGACGGCTAAAAGAGA 58.644 47.619 0.00 0.00 0.00 3.10
898 1116 1.401905 GGCATTGGACGGCTAAAAGAG 59.598 52.381 0.00 0.00 0.00 2.85
899 1117 1.004277 AGGCATTGGACGGCTAAAAGA 59.996 47.619 0.00 0.00 37.53 2.52
900 1118 1.133025 CAGGCATTGGACGGCTAAAAG 59.867 52.381 0.00 0.00 37.53 2.27
901 1119 1.173043 CAGGCATTGGACGGCTAAAA 58.827 50.000 0.00 0.00 37.53 1.52
902 1120 1.312371 GCAGGCATTGGACGGCTAAA 61.312 55.000 0.00 0.00 40.44 1.85
903 1121 1.748879 GCAGGCATTGGACGGCTAA 60.749 57.895 0.00 0.00 40.44 3.09
904 1122 2.124736 GCAGGCATTGGACGGCTA 60.125 61.111 0.00 0.00 40.44 3.93
906 1124 3.512516 GAGCAGGCATTGGACGGC 61.513 66.667 0.00 0.00 44.40 5.68
907 1125 2.825836 GGAGCAGGCATTGGACGG 60.826 66.667 0.00 0.00 0.00 4.79
908 1126 2.825836 GGGAGCAGGCATTGGACG 60.826 66.667 0.00 0.00 0.00 4.79
909 1127 2.440980 GGGGAGCAGGCATTGGAC 60.441 66.667 0.00 0.00 0.00 4.02
910 1128 3.743017 GGGGGAGCAGGCATTGGA 61.743 66.667 0.00 0.00 0.00 3.53
924 1142 0.998945 AGAGAGAGGGAGAGAGGGGG 60.999 65.000 0.00 0.00 0.00 5.40
925 1143 0.933700 AAGAGAGAGGGAGAGAGGGG 59.066 60.000 0.00 0.00 0.00 4.79
926 1144 1.852965 AGAAGAGAGAGGGAGAGAGGG 59.147 57.143 0.00 0.00 0.00 4.30
927 1145 3.669939 AAGAAGAGAGAGGGAGAGAGG 57.330 52.381 0.00 0.00 0.00 3.69
928 1146 4.860022 AGAAAGAAGAGAGAGGGAGAGAG 58.140 47.826 0.00 0.00 0.00 3.20
929 1147 4.325030 GGAGAAAGAAGAGAGAGGGAGAGA 60.325 50.000 0.00 0.00 0.00 3.10
930 1148 3.954258 GGAGAAAGAAGAGAGAGGGAGAG 59.046 52.174 0.00 0.00 0.00 3.20
931 1149 3.309556 GGGAGAAAGAAGAGAGAGGGAGA 60.310 52.174 0.00 0.00 0.00 3.71
932 1150 3.031013 GGGAGAAAGAAGAGAGAGGGAG 58.969 54.545 0.00 0.00 0.00 4.30
933 1151 2.621929 CGGGAGAAAGAAGAGAGAGGGA 60.622 54.545 0.00 0.00 0.00 4.20
934 1152 1.754226 CGGGAGAAAGAAGAGAGAGGG 59.246 57.143 0.00 0.00 0.00 4.30
935 1153 1.136110 GCGGGAGAAAGAAGAGAGAGG 59.864 57.143 0.00 0.00 0.00 3.69
936 1154 1.821753 TGCGGGAGAAAGAAGAGAGAG 59.178 52.381 0.00 0.00 0.00 3.20
937 1155 1.546476 GTGCGGGAGAAAGAAGAGAGA 59.454 52.381 0.00 0.00 0.00 3.10
938 1156 1.734047 CGTGCGGGAGAAAGAAGAGAG 60.734 57.143 0.00 0.00 0.00 3.20
939 1157 0.243907 CGTGCGGGAGAAAGAAGAGA 59.756 55.000 0.00 0.00 0.00 3.10
940 1158 1.355066 GCGTGCGGGAGAAAGAAGAG 61.355 60.000 0.00 0.00 0.00 2.85
1296 1763 1.303074 CAGCCATCCATCCATCCGG 60.303 63.158 0.00 0.00 0.00 5.14
1308 1775 3.383505 CACACATCAATCAATCCAGCCAT 59.616 43.478 0.00 0.00 0.00 4.40
1312 1779 2.421073 ACGCACACATCAATCAATCCAG 59.579 45.455 0.00 0.00 0.00 3.86
1314 1781 2.789208 CACGCACACATCAATCAATCC 58.211 47.619 0.00 0.00 0.00 3.01
1317 1784 0.110283 CGCACGCACACATCAATCAA 60.110 50.000 0.00 0.00 0.00 2.57
1562 2029 2.320805 TACTAGCGGCGCTAATTACG 57.679 50.000 37.16 27.91 40.82 3.18
1587 2054 4.095932 ACAAGAAACGGACAAGAAAACTCC 59.904 41.667 0.00 0.00 0.00 3.85
1612 2162 6.308675 GGTTCCTTTTTGGTTTTTCGTTTTC 58.691 36.000 0.00 0.00 37.07 2.29
1617 2210 3.548668 GTCGGTTCCTTTTTGGTTTTTCG 59.451 43.478 0.00 0.00 37.07 3.46
1618 2211 3.548668 CGTCGGTTCCTTTTTGGTTTTTC 59.451 43.478 0.00 0.00 37.07 2.29
1631 2224 1.574134 TTGTTGAGTTCGTCGGTTCC 58.426 50.000 0.00 0.00 0.00 3.62
1632 2225 3.057734 AGATTGTTGAGTTCGTCGGTTC 58.942 45.455 0.00 0.00 0.00 3.62
1633 2226 2.800544 CAGATTGTTGAGTTCGTCGGTT 59.199 45.455 0.00 0.00 0.00 4.44
1635 2228 1.126846 GCAGATTGTTGAGTTCGTCGG 59.873 52.381 0.00 0.00 0.00 4.79
1639 2232 3.062763 ACTCTGCAGATTGTTGAGTTCG 58.937 45.455 18.63 3.13 34.78 3.95
1640 2233 3.364764 GCACTCTGCAGATTGTTGAGTTC 60.365 47.826 28.44 11.51 44.26 3.01
1641 2234 2.551459 GCACTCTGCAGATTGTTGAGTT 59.449 45.455 28.44 2.14 44.26 3.01
1642 2235 2.149578 GCACTCTGCAGATTGTTGAGT 58.850 47.619 28.44 14.74 44.26 3.41
1643 2236 2.896243 GCACTCTGCAGATTGTTGAG 57.104 50.000 28.44 14.14 44.26 3.02
1686 2279 1.485943 GAACTCGCCGAACACGAAC 59.514 57.895 0.00 0.00 39.39 3.95
2094 2687 2.200955 AGGAGGAAAAGGGAGGTGATC 58.799 52.381 0.00 0.00 0.00 2.92
2095 2688 2.367947 AGGAGGAAAAGGGAGGTGAT 57.632 50.000 0.00 0.00 0.00 3.06
2096 2689 2.108250 CAAAGGAGGAAAAGGGAGGTGA 59.892 50.000 0.00 0.00 0.00 4.02
2098 2691 2.428901 TCAAAGGAGGAAAAGGGAGGT 58.571 47.619 0.00 0.00 0.00 3.85
2102 2695 6.014327 TCAATGAAATCAAAGGAGGAAAAGGG 60.014 38.462 0.00 0.00 0.00 3.95
2122 2723 3.881688 CAGGAAGCAAGTAGGGATCAATG 59.118 47.826 0.00 0.00 0.00 2.82
2129 2734 0.678048 GCACCAGGAAGCAAGTAGGG 60.678 60.000 0.00 0.00 0.00 3.53
2143 2748 2.357396 CACACGCTAGCAGCACCA 60.357 61.111 16.45 0.00 42.58 4.17
2144 2749 3.121030 CCACACGCTAGCAGCACC 61.121 66.667 16.45 0.00 42.58 5.01
2145 2750 3.121030 CCCACACGCTAGCAGCAC 61.121 66.667 16.45 0.00 42.58 4.40
2146 2751 3.625897 ACCCACACGCTAGCAGCA 61.626 61.111 16.45 0.00 42.58 4.41
2147 2752 3.121030 CACCCACACGCTAGCAGC 61.121 66.667 16.45 0.00 38.02 5.25
2148 2753 3.121030 GCACCCACACGCTAGCAG 61.121 66.667 16.45 9.13 0.00 4.24
2149 2754 3.589654 GAGCACCCACACGCTAGCA 62.590 63.158 16.45 0.00 38.99 3.49
2150 2755 2.815647 GAGCACCCACACGCTAGC 60.816 66.667 4.06 4.06 38.99 3.42
2151 2756 1.446792 CAGAGCACCCACACGCTAG 60.447 63.158 0.00 0.00 38.99 3.42
2152 2757 2.656646 CAGAGCACCCACACGCTA 59.343 61.111 0.00 0.00 38.99 4.26
2153 2758 4.996434 GCAGAGCACCCACACGCT 62.996 66.667 0.00 0.00 42.42 5.07
2154 2759 4.996434 AGCAGAGCACCCACACGC 62.996 66.667 0.00 0.00 0.00 5.34
2155 2760 2.740055 GAGCAGAGCACCCACACG 60.740 66.667 0.00 0.00 0.00 4.49
2156 2761 1.375268 GAGAGCAGAGCACCCACAC 60.375 63.158 0.00 0.00 0.00 3.82
2157 2762 2.587247 GGAGAGCAGAGCACCCACA 61.587 63.158 0.00 0.00 0.00 4.17
2158 2763 2.237534 GAGGAGAGCAGAGCACCCAC 62.238 65.000 0.00 0.00 0.00 4.61
2298 2933 1.172812 AGCAAAAGGACGGTGGAAGC 61.173 55.000 0.00 0.00 0.00 3.86
2299 2934 2.076863 CTAGCAAAAGGACGGTGGAAG 58.923 52.381 0.00 0.00 0.00 3.46
2300 2935 1.418637 ACTAGCAAAAGGACGGTGGAA 59.581 47.619 0.00 0.00 0.00 3.53
2302 2937 1.892209 AACTAGCAAAAGGACGGTGG 58.108 50.000 0.00 0.00 0.00 4.61
2316 2963 3.791887 CGACGCCACTCATCTAAAACTAG 59.208 47.826 0.00 0.00 0.00 2.57
2355 3011 2.763215 CTTGTTGCCCTGGCCCTA 59.237 61.111 5.57 0.00 41.09 3.53
2375 3036 1.360393 TGGGAAGGAACACCAGCCTT 61.360 55.000 0.00 0.00 46.74 4.35
2376 3037 1.774217 TGGGAAGGAACACCAGCCT 60.774 57.895 0.00 0.00 35.61 4.58
2377 3038 1.303643 CTGGGAAGGAACACCAGCC 60.304 63.158 0.00 0.00 44.55 4.85
2378 3039 4.404691 CTGGGAAGGAACACCAGC 57.595 61.111 0.00 0.00 44.55 4.85
2393 3054 0.041238 TCCCCACTGTCCTACTCCTG 59.959 60.000 0.00 0.00 0.00 3.86
2492 3153 2.886512 GAACAGCTATGCGTGCGTGC 62.887 60.000 0.00 0.00 35.28 5.34
2546 3214 1.808411 TAGTGTTGTGCCAAGCTAGC 58.192 50.000 6.62 6.62 0.00 3.42
2547 3215 3.058914 GTGTTAGTGTTGTGCCAAGCTAG 60.059 47.826 0.00 0.00 0.00 3.42
2548 3216 2.875933 GTGTTAGTGTTGTGCCAAGCTA 59.124 45.455 0.00 0.00 0.00 3.32
2549 3217 1.676006 GTGTTAGTGTTGTGCCAAGCT 59.324 47.619 0.00 0.00 0.00 3.74
2654 3322 2.818432 ACTACGTGGTTCAGTGAGGTAG 59.182 50.000 0.00 12.12 33.82 3.18
2702 3370 4.453480 AAGACCATCACTCCCTCAAAAA 57.547 40.909 0.00 0.00 0.00 1.94
2703 3371 4.597507 ACTAAGACCATCACTCCCTCAAAA 59.402 41.667 0.00 0.00 0.00 2.44
2704 3372 4.168101 ACTAAGACCATCACTCCCTCAAA 58.832 43.478 0.00 0.00 0.00 2.69
2705 3373 3.791320 ACTAAGACCATCACTCCCTCAA 58.209 45.455 0.00 0.00 0.00 3.02
2706 3374 3.474798 ACTAAGACCATCACTCCCTCA 57.525 47.619 0.00 0.00 0.00 3.86
2707 3375 4.538738 AGTACTAAGACCATCACTCCCTC 58.461 47.826 0.00 0.00 0.00 4.30
2708 3376 4.611564 AGTACTAAGACCATCACTCCCT 57.388 45.455 0.00 0.00 0.00 4.20
2709 3377 6.980416 ATTAGTACTAAGACCATCACTCCC 57.020 41.667 19.58 0.00 0.00 4.30
2710 3378 9.747293 GTTAATTAGTACTAAGACCATCACTCC 57.253 37.037 19.58 0.00 0.00 3.85
2713 3381 9.017669 CGTGTTAATTAGTACTAAGACCATCAC 57.982 37.037 19.58 18.61 0.00 3.06
2714 3382 8.742777 ACGTGTTAATTAGTACTAAGACCATCA 58.257 33.333 19.58 11.12 0.00 3.07
2715 3383 9.230932 GACGTGTTAATTAGTACTAAGACCATC 57.769 37.037 19.58 11.32 0.00 3.51
2716 3384 7.912250 CGACGTGTTAATTAGTACTAAGACCAT 59.088 37.037 19.58 0.95 0.00 3.55
2719 3387 6.742718 TGCGACGTGTTAATTAGTACTAAGAC 59.257 38.462 19.58 16.79 0.00 3.01
2730 3398 0.437295 GAGCGTGCGACGTGTTAATT 59.563 50.000 0.00 0.00 44.73 1.40
2756 3594 3.963383 ACCTAAAGTTGTCTTTGCGTG 57.037 42.857 3.85 0.00 42.86 5.34
2774 3612 5.154222 GTGCTCTATGCTTTTGTTTGTACC 58.846 41.667 0.00 0.00 43.37 3.34
2775 3613 5.757886 TGTGCTCTATGCTTTTGTTTGTAC 58.242 37.500 0.00 0.00 43.37 2.90
2776 3614 6.384258 TTGTGCTCTATGCTTTTGTTTGTA 57.616 33.333 0.00 0.00 43.37 2.41
2777 3615 4.916983 TGTGCTCTATGCTTTTGTTTGT 57.083 36.364 0.00 0.00 43.37 2.83
2778 3616 5.978919 TCTTTGTGCTCTATGCTTTTGTTTG 59.021 36.000 0.00 0.00 43.37 2.93
2780 3618 5.772825 TCTTTGTGCTCTATGCTTTTGTT 57.227 34.783 0.00 0.00 43.37 2.83
2786 3630 2.350522 CCGTTCTTTGTGCTCTATGCT 58.649 47.619 0.00 0.00 43.37 3.79
2788 3632 2.673368 GTCCCGTTCTTTGTGCTCTATG 59.327 50.000 0.00 0.00 0.00 2.23
2789 3633 2.301870 TGTCCCGTTCTTTGTGCTCTAT 59.698 45.455 0.00 0.00 0.00 1.98
2796 3640 4.618920 AATACTCTGTCCCGTTCTTTGT 57.381 40.909 0.00 0.00 0.00 2.83
2797 3641 6.164176 AGTAAATACTCTGTCCCGTTCTTTG 58.836 40.000 0.00 0.00 0.00 2.77
2804 3648 5.109903 CCTTGAAGTAAATACTCTGTCCCG 58.890 45.833 0.00 0.00 34.99 5.14
2820 3728 2.168728 GACCTAGCTACACCCCTTGAAG 59.831 54.545 0.00 0.00 0.00 3.02
2823 3731 1.867363 AGACCTAGCTACACCCCTTG 58.133 55.000 0.00 0.00 0.00 3.61
2824 3732 2.091222 CCTAGACCTAGCTACACCCCTT 60.091 54.545 0.00 0.00 31.95 3.95
2825 3733 1.499870 CCTAGACCTAGCTACACCCCT 59.500 57.143 0.00 0.00 31.95 4.79
2826 3734 1.217436 ACCTAGACCTAGCTACACCCC 59.783 57.143 0.00 0.00 31.95 4.95
2827 3735 2.091994 TGACCTAGACCTAGCTACACCC 60.092 54.545 0.00 0.00 31.95 4.61
2828 3736 3.294038 TGACCTAGACCTAGCTACACC 57.706 52.381 0.00 0.00 31.95 4.16
2830 3738 4.018688 TCAGTTGACCTAGACCTAGCTACA 60.019 45.833 0.00 0.00 31.95 2.74
2831 3739 4.525024 TCAGTTGACCTAGACCTAGCTAC 58.475 47.826 0.00 0.00 31.95 3.58
2832 3740 4.473922 TCTCAGTTGACCTAGACCTAGCTA 59.526 45.833 0.00 0.00 31.95 3.32
2834 3742 3.622630 TCTCAGTTGACCTAGACCTAGC 58.377 50.000 0.00 0.00 31.95 3.42
2835 3743 6.783708 AAATCTCAGTTGACCTAGACCTAG 57.216 41.667 0.00 0.00 0.00 3.02
2836 3744 6.321690 GCTAAATCTCAGTTGACCTAGACCTA 59.678 42.308 0.00 0.00 0.00 3.08
2837 3745 5.128008 GCTAAATCTCAGTTGACCTAGACCT 59.872 44.000 0.00 0.00 0.00 3.85
2839 3747 5.105310 TGGCTAAATCTCAGTTGACCTAGAC 60.105 44.000 0.00 0.00 0.00 2.59
2841 3749 5.344743 TGGCTAAATCTCAGTTGACCTAG 57.655 43.478 0.00 0.00 0.00 3.02
2846 3754 6.061441 TGAAACTTGGCTAAATCTCAGTTGA 58.939 36.000 0.00 0.00 0.00 3.18
2847 3755 6.016777 ACTGAAACTTGGCTAAATCTCAGTTG 60.017 38.462 11.98 0.00 31.70 3.16
2848 3756 6.064717 ACTGAAACTTGGCTAAATCTCAGTT 58.935 36.000 11.98 0.00 31.70 3.16
2849 3757 5.625150 ACTGAAACTTGGCTAAATCTCAGT 58.375 37.500 11.98 11.98 0.00 3.41
2850 3758 5.702670 TGACTGAAACTTGGCTAAATCTCAG 59.297 40.000 11.03 11.03 0.00 3.35
2851 3759 5.620206 TGACTGAAACTTGGCTAAATCTCA 58.380 37.500 0.00 0.00 0.00 3.27
2852 3760 6.205658 ACTTGACTGAAACTTGGCTAAATCTC 59.794 38.462 0.00 0.00 0.00 2.75
2853 3761 6.016777 CACTTGACTGAAACTTGGCTAAATCT 60.017 38.462 0.00 0.00 0.00 2.40
2854 3762 6.017109 TCACTTGACTGAAACTTGGCTAAATC 60.017 38.462 0.00 0.00 0.00 2.17
2855 3763 5.827797 TCACTTGACTGAAACTTGGCTAAAT 59.172 36.000 0.00 0.00 0.00 1.40
2856 3764 5.065988 GTCACTTGACTGAAACTTGGCTAAA 59.934 40.000 1.92 0.00 41.65 1.85
2857 3765 4.574828 GTCACTTGACTGAAACTTGGCTAA 59.425 41.667 1.92 0.00 41.65 3.09
2858 3766 4.127171 GTCACTTGACTGAAACTTGGCTA 58.873 43.478 1.92 0.00 41.65 3.93
2859 3767 2.945668 GTCACTTGACTGAAACTTGGCT 59.054 45.455 1.92 0.00 41.65 4.75
2860 3768 2.682856 TGTCACTTGACTGAAACTTGGC 59.317 45.455 10.63 0.00 44.99 4.52
2861 3769 5.760253 ACTATGTCACTTGACTGAAACTTGG 59.240 40.000 10.63 0.00 44.99 3.61
2862 3770 6.851222 ACTATGTCACTTGACTGAAACTTG 57.149 37.500 10.63 0.00 44.99 3.16
2901 3809 8.738106 TCCATGCAAAAATTTCTTTCTGTTTTT 58.262 25.926 0.00 0.00 34.98 1.94
2902 3810 8.278729 TCCATGCAAAAATTTCTTTCTGTTTT 57.721 26.923 0.00 0.00 0.00 2.43
2903 3811 7.862512 TCCATGCAAAAATTTCTTTCTGTTT 57.137 28.000 0.00 0.00 0.00 2.83
2904 3812 7.935210 AGATCCATGCAAAAATTTCTTTCTGTT 59.065 29.630 0.00 0.00 0.00 3.16
2905 3813 7.447594 AGATCCATGCAAAAATTTCTTTCTGT 58.552 30.769 0.00 0.00 0.00 3.41
2906 3814 7.064253 GGAGATCCATGCAAAAATTTCTTTCTG 59.936 37.037 0.00 0.00 35.64 3.02
2907 3815 7.101700 GGAGATCCATGCAAAAATTTCTTTCT 58.898 34.615 0.00 0.00 35.64 2.52
2908 3816 6.875195 TGGAGATCCATGCAAAAATTTCTTTC 59.125 34.615 0.00 0.00 42.01 2.62
2909 3817 6.771573 TGGAGATCCATGCAAAAATTTCTTT 58.228 32.000 0.00 0.00 42.01 2.52
2910 3818 6.363167 TGGAGATCCATGCAAAAATTTCTT 57.637 33.333 0.00 0.00 42.01 2.52
2931 3839 6.705825 TGTTATGTTCATTCGATCCTACATGG 59.294 38.462 11.64 0.00 37.10 3.66
2932 3840 7.713764 TGTTATGTTCATTCGATCCTACATG 57.286 36.000 11.64 0.00 0.00 3.21
2933 3841 8.777413 CAATGTTATGTTCATTCGATCCTACAT 58.223 33.333 8.25 8.25 33.92 2.29
2934 3842 7.984617 TCAATGTTATGTTCATTCGATCCTACA 59.015 33.333 0.00 0.00 33.92 2.74
2935 3843 8.276325 GTCAATGTTATGTTCATTCGATCCTAC 58.724 37.037 0.00 0.00 33.92 3.18
2936 3844 8.204160 AGTCAATGTTATGTTCATTCGATCCTA 58.796 33.333 0.00 0.00 33.92 2.94
2937 3845 7.011763 CAGTCAATGTTATGTTCATTCGATCCT 59.988 37.037 0.00 0.00 33.92 3.24
2938 3846 7.011389 TCAGTCAATGTTATGTTCATTCGATCC 59.989 37.037 0.00 0.00 33.92 3.36
2939 3847 7.909267 TCAGTCAATGTTATGTTCATTCGATC 58.091 34.615 0.00 0.00 33.92 3.69
2940 3848 7.765819 TCTCAGTCAATGTTATGTTCATTCGAT 59.234 33.333 0.00 0.00 33.92 3.59
2941 3849 7.063426 GTCTCAGTCAATGTTATGTTCATTCGA 59.937 37.037 0.00 0.00 33.92 3.71
2942 3850 7.148590 TGTCTCAGTCAATGTTATGTTCATTCG 60.149 37.037 0.00 0.00 33.92 3.34
2943 3851 8.032952 TGTCTCAGTCAATGTTATGTTCATTC 57.967 34.615 0.00 0.00 33.92 2.67
2944 3852 7.984422 TGTCTCAGTCAATGTTATGTTCATT 57.016 32.000 0.00 0.00 36.16 2.57
2945 3853 9.671279 TTATGTCTCAGTCAATGTTATGTTCAT 57.329 29.630 0.00 0.00 0.00 2.57
2946 3854 8.935844 GTTATGTCTCAGTCAATGTTATGTTCA 58.064 33.333 0.00 0.00 0.00 3.18
2947 3855 8.391106 GGTTATGTCTCAGTCAATGTTATGTTC 58.609 37.037 0.00 0.00 0.00 3.18
2948 3856 7.882791 TGGTTATGTCTCAGTCAATGTTATGTT 59.117 33.333 0.00 0.00 0.00 2.71
2949 3857 7.394016 TGGTTATGTCTCAGTCAATGTTATGT 58.606 34.615 0.00 0.00 0.00 2.29
2950 3858 7.848223 TGGTTATGTCTCAGTCAATGTTATG 57.152 36.000 0.00 0.00 0.00 1.90
2951 3859 9.466497 AATTGGTTATGTCTCAGTCAATGTTAT 57.534 29.630 0.00 0.00 0.00 1.89
2952 3860 8.862325 AATTGGTTATGTCTCAGTCAATGTTA 57.138 30.769 0.00 0.00 0.00 2.41
2953 3861 7.667219 AGAATTGGTTATGTCTCAGTCAATGTT 59.333 33.333 0.00 0.00 0.00 2.71
2954 3862 7.170965 AGAATTGGTTATGTCTCAGTCAATGT 58.829 34.615 0.00 0.00 0.00 2.71
2955 3863 7.335171 TGAGAATTGGTTATGTCTCAGTCAATG 59.665 37.037 0.00 0.00 41.13 2.82
2956 3864 7.397221 TGAGAATTGGTTATGTCTCAGTCAAT 58.603 34.615 0.00 0.00 41.13 2.57
2957 3865 6.768483 TGAGAATTGGTTATGTCTCAGTCAA 58.232 36.000 0.00 0.00 41.13 3.18
2958 3866 6.358974 TGAGAATTGGTTATGTCTCAGTCA 57.641 37.500 0.00 0.00 41.13 3.41
2959 3867 7.254252 CGATTGAGAATTGGTTATGTCTCAGTC 60.254 40.741 12.45 12.45 45.30 3.51
2960 3868 6.536582 CGATTGAGAATTGGTTATGTCTCAGT 59.463 38.462 2.79 0.44 45.30 3.41
2961 3869 6.758416 TCGATTGAGAATTGGTTATGTCTCAG 59.242 38.462 2.79 0.00 45.30 3.35
2962 3870 6.535150 GTCGATTGAGAATTGGTTATGTCTCA 59.465 38.462 0.00 0.00 43.58 3.27
2963 3871 6.758886 AGTCGATTGAGAATTGGTTATGTCTC 59.241 38.462 0.00 0.00 37.59 3.36
2964 3872 6.536582 CAGTCGATTGAGAATTGGTTATGTCT 59.463 38.462 0.86 0.00 0.00 3.41
2965 3873 6.535150 TCAGTCGATTGAGAATTGGTTATGTC 59.465 38.462 6.51 0.00 0.00 3.06
2966 3874 6.406370 TCAGTCGATTGAGAATTGGTTATGT 58.594 36.000 6.51 0.00 0.00 2.29
2967 3875 6.908870 TCAGTCGATTGAGAATTGGTTATG 57.091 37.500 6.51 0.00 0.00 1.90
2978 3886 1.740585 ACCGAGTCTCAGTCGATTGAG 59.259 52.381 27.00 27.00 43.33 3.02
2979 3887 1.822506 ACCGAGTCTCAGTCGATTGA 58.177 50.000 10.44 10.44 43.33 2.57
2980 3888 3.759527 TTACCGAGTCTCAGTCGATTG 57.240 47.619 0.68 0.68 43.33 2.67
2981 3889 4.217983 AGTTTTACCGAGTCTCAGTCGATT 59.782 41.667 0.00 0.00 43.33 3.34
2982 3890 3.757493 AGTTTTACCGAGTCTCAGTCGAT 59.243 43.478 0.00 0.00 43.33 3.59
2983 3891 3.058432 CAGTTTTACCGAGTCTCAGTCGA 60.058 47.826 0.00 0.00 43.33 4.20
2984 3892 3.235195 CAGTTTTACCGAGTCTCAGTCG 58.765 50.000 0.00 0.00 40.53 4.18
2985 3893 4.228317 GACAGTTTTACCGAGTCTCAGTC 58.772 47.826 0.00 0.00 0.00 3.51
2986 3894 3.635373 TGACAGTTTTACCGAGTCTCAGT 59.365 43.478 0.00 0.00 0.00 3.41
2987 3895 3.982058 GTGACAGTTTTACCGAGTCTCAG 59.018 47.826 0.00 0.00 0.00 3.35
2988 3896 3.635373 AGTGACAGTTTTACCGAGTCTCA 59.365 43.478 0.00 0.00 0.00 3.27
2989 3897 4.023021 AGAGTGACAGTTTTACCGAGTCTC 60.023 45.833 0.00 0.00 0.00 3.36
2990 3898 3.890147 AGAGTGACAGTTTTACCGAGTCT 59.110 43.478 0.00 0.00 0.00 3.24
2991 3899 4.240175 AGAGTGACAGTTTTACCGAGTC 57.760 45.455 0.00 0.00 0.00 3.36
2992 3900 5.779529 TTAGAGTGACAGTTTTACCGAGT 57.220 39.130 0.00 0.00 0.00 4.18
2993 3901 7.811236 TGTTATTAGAGTGACAGTTTTACCGAG 59.189 37.037 0.00 0.00 0.00 4.63
2994 3902 7.660112 TGTTATTAGAGTGACAGTTTTACCGA 58.340 34.615 0.00 0.00 0.00 4.69
2995 3903 7.878477 TGTTATTAGAGTGACAGTTTTACCG 57.122 36.000 0.00 0.00 0.00 4.02
2996 3904 9.485206 TCTTGTTATTAGAGTGACAGTTTTACC 57.515 33.333 0.00 0.00 0.00 2.85
3002 3910 9.809096 CACATATCTTGTTATTAGAGTGACAGT 57.191 33.333 0.00 0.00 36.00 3.55
3003 3911 9.254133 CCACATATCTTGTTATTAGAGTGACAG 57.746 37.037 0.00 0.00 36.00 3.51
3004 3912 7.710907 GCCACATATCTTGTTATTAGAGTGACA 59.289 37.037 0.00 0.00 36.00 3.58
3005 3913 7.096023 CGCCACATATCTTGTTATTAGAGTGAC 60.096 40.741 0.00 0.00 36.00 3.67
3006 3914 6.923508 CGCCACATATCTTGTTATTAGAGTGA 59.076 38.462 0.00 0.00 36.00 3.41
3009 3917 7.946655 TTCGCCACATATCTTGTTATTAGAG 57.053 36.000 0.00 0.00 36.00 2.43
3011 3925 7.535258 GCAATTCGCCACATATCTTGTTATTAG 59.465 37.037 0.00 0.00 36.00 1.73
3024 3943 0.034574 TACCCTGCAATTCGCCACAT 60.035 50.000 0.00 0.00 41.33 3.21
3031 3959 2.369394 CCCTCTTGTACCCTGCAATTC 58.631 52.381 0.00 0.00 0.00 2.17
3034 3962 0.474854 TCCCCTCTTGTACCCTGCAA 60.475 55.000 0.00 0.00 0.00 4.08
3080 4014 1.050204 TGTTGTAGTTGTACGGGCCT 58.950 50.000 0.84 0.00 30.95 5.19
3301 4249 3.401033 TGAAGGATCATCGTGTGTGTT 57.599 42.857 0.00 0.00 0.00 3.32
3312 4260 6.566079 AGTTTAGTCATGGATGAAGGATCA 57.434 37.500 0.00 0.00 38.75 2.92
3313 4261 7.439655 GTGTAGTTTAGTCATGGATGAAGGATC 59.560 40.741 0.00 0.00 38.75 3.36
3314 4262 7.275920 GTGTAGTTTAGTCATGGATGAAGGAT 58.724 38.462 0.00 0.00 38.75 3.24
3315 4263 6.351881 GGTGTAGTTTAGTCATGGATGAAGGA 60.352 42.308 0.00 0.00 38.75 3.36
3316 4264 5.817816 GGTGTAGTTTAGTCATGGATGAAGG 59.182 44.000 0.00 0.00 38.75 3.46
3317 4265 6.406370 TGGTGTAGTTTAGTCATGGATGAAG 58.594 40.000 0.00 0.00 38.75 3.02
3318 4266 6.367374 TGGTGTAGTTTAGTCATGGATGAA 57.633 37.500 0.00 0.00 38.75 2.57
3321 4269 6.097839 ACGTATGGTGTAGTTTAGTCATGGAT 59.902 38.462 0.00 0.00 0.00 3.41
3433 4401 4.270392 CGTGACACGGCCAATGTA 57.730 55.556 20.26 0.00 38.08 2.29
3488 4456 0.898326 TCAAGACAGTAGAGGCGCCA 60.898 55.000 31.54 4.59 0.00 5.69
3490 4458 1.407258 AGATCAAGACAGTAGAGGCGC 59.593 52.381 0.00 0.00 0.00 6.53
3491 4459 2.685388 TCAGATCAAGACAGTAGAGGCG 59.315 50.000 0.00 0.00 0.00 5.52
3531 4508 7.431084 CGATTTACTTGCCAATATACAACCAAC 59.569 37.037 0.00 0.00 0.00 3.77
3569 4546 0.865639 GCCGACACAACAACAACAGC 60.866 55.000 0.00 0.00 0.00 4.40
3570 4547 0.732571 AGCCGACACAACAACAACAG 59.267 50.000 0.00 0.00 0.00 3.16
3649 4633 9.372369 TGTTCTCCGAAAATGTTTGTTATTTTT 57.628 25.926 0.00 0.00 37.73 1.94
3652 4636 6.635239 CGTGTTCTCCGAAAATGTTTGTTATT 59.365 34.615 0.00 0.00 0.00 1.40
3707 4691 4.071423 TCATCTTTTGTTCGCATTCCTGA 58.929 39.130 0.00 0.00 0.00 3.86
3708 4692 4.424061 TCATCTTTTGTTCGCATTCCTG 57.576 40.909 0.00 0.00 0.00 3.86
3709 4693 5.452078 TTTCATCTTTTGTTCGCATTCCT 57.548 34.783 0.00 0.00 0.00 3.36
3710 4694 5.863397 TGATTTCATCTTTTGTTCGCATTCC 59.137 36.000 0.00 0.00 0.00 3.01
3711 4695 6.932901 TGATTTCATCTTTTGTTCGCATTC 57.067 33.333 0.00 0.00 0.00 2.67
3823 4807 3.126171 TCGCACCTATTGGATTTTGTTCG 59.874 43.478 0.00 0.00 37.04 3.95
3831 4815 2.224606 CAATGCTCGCACCTATTGGAT 58.775 47.619 0.00 0.00 37.04 3.41
3841 4825 1.218875 AAACGACGACAATGCTCGCA 61.219 50.000 0.00 0.00 37.15 5.10
3844 4828 3.423123 CCAACTAAACGACGACAATGCTC 60.423 47.826 0.00 0.00 0.00 4.26
3845 4829 2.478894 CCAACTAAACGACGACAATGCT 59.521 45.455 0.00 0.00 0.00 3.79
3847 4831 2.412325 GCCCAACTAAACGACGACAATG 60.412 50.000 0.00 0.00 0.00 2.82
3848 4832 1.802365 GCCCAACTAAACGACGACAAT 59.198 47.619 0.00 0.00 0.00 2.71
3849 4833 1.219646 GCCCAACTAAACGACGACAA 58.780 50.000 0.00 0.00 0.00 3.18
3852 4843 1.504359 CTTGCCCAACTAAACGACGA 58.496 50.000 0.00 0.00 0.00 4.20
3855 4846 0.891904 GGCCTTGCCCAACTAAACGA 60.892 55.000 0.00 0.00 44.06 3.85
4001 4999 9.549078 GGTATTTCAATTTTTGGAACAGGTTAA 57.451 29.630 0.00 0.00 42.39 2.01
4002 5000 8.705594 TGGTATTTCAATTTTTGGAACAGGTTA 58.294 29.630 0.00 0.00 42.39 2.85
4201 5200 8.984764 GGTGTGAAGGAAAATGGTATTTAAAAC 58.015 33.333 0.00 0.00 0.00 2.43
4209 5208 4.042311 TGCTAGGTGTGAAGGAAAATGGTA 59.958 41.667 0.00 0.00 0.00 3.25
4213 5212 4.019174 CCATGCTAGGTGTGAAGGAAAAT 58.981 43.478 0.00 0.00 0.00 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.