Multiple sequence alignment - TraesCS1A01G121300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G121300 chr1A 100.000 7763 0 0 1 7763 134942548 134950310 0.000000e+00 14336.0
1 TraesCS1A01G121300 chr1A 89.005 382 27 7 6987 7353 310922331 310922712 7.100000e-125 459.0
2 TraesCS1A01G121300 chr1A 89.474 95 7 2 3567 3660 522462371 522462463 4.920000e-22 117.0
3 TraesCS1A01G121300 chr1A 94.595 37 1 1 6132 6167 252281641 252281677 1.000000e-03 56.5
4 TraesCS1A01G121300 chr1D 96.214 5098 131 30 901 5975 122767418 122772476 0.000000e+00 8288.0
5 TraesCS1A01G121300 chr1D 95.711 956 30 2 6035 6989 122772476 122773421 0.000000e+00 1528.0
6 TraesCS1A01G121300 chr1D 95.400 413 19 0 7351 7763 304848171 304847759 0.000000e+00 658.0
7 TraesCS1A01G121300 chr1D 90.600 500 37 8 1 499 122766701 122767191 0.000000e+00 654.0
8 TraesCS1A01G121300 chr1D 88.743 382 28 7 6987 7353 304848521 304848140 3.300000e-123 453.0
9 TraesCS1A01G121300 chr1D 88.743 382 27 8 6987 7353 457143149 457142769 3.300000e-123 453.0
10 TraesCS1A01G121300 chr1D 90.594 202 11 4 655 848 318726698 318726497 2.150000e-65 261.0
11 TraesCS1A01G121300 chr1D 88.750 160 15 3 500 658 122767234 122767391 7.950000e-45 193.0
12 TraesCS1A01G121300 chr1D 89.655 87 7 1 3566 3652 201306818 201306902 8.240000e-20 110.0
13 TraesCS1A01G121300 chr1B 95.971 3549 94 21 3470 6989 186799240 186802768 0.000000e+00 5716.0
14 TraesCS1A01G121300 chr1B 95.598 1363 26 6 2149 3485 186797523 186798877 0.000000e+00 2154.0
15 TraesCS1A01G121300 chr1B 96.693 1270 28 5 845 2112 186796269 186797526 0.000000e+00 2100.0
16 TraesCS1A01G121300 chr1B 93.705 413 26 0 7351 7763 180402677 180402265 3.080000e-173 619.0
17 TraesCS1A01G121300 chr1B 84.014 563 67 14 39 581 186788671 186789230 3.210000e-143 520.0
18 TraesCS1A01G121300 chr1B 88.451 381 30 11 6987 7353 117211577 117211197 1.540000e-121 448.0
19 TraesCS1A01G121300 chr1B 95.506 89 3 1 3565 3653 669035882 669035969 2.920000e-29 141.0
20 TraesCS1A01G121300 chr1B 100.000 44 0 0 1 44 186777570 186777613 1.800000e-11 82.4
21 TraesCS1A01G121300 chr1B 95.652 46 1 1 5719 5763 7511955 7511910 1.080000e-08 73.1
22 TraesCS1A01G121300 chr1B 95.652 46 1 1 5719 5763 7515382 7515337 1.080000e-08 73.1
23 TraesCS1A01G121300 chr3D 90.244 574 27 11 7190 7763 313315907 313315363 0.000000e+00 723.0
24 TraesCS1A01G121300 chr3D 91.489 94 5 1 3560 3653 76229518 76229428 8.180000e-25 126.0
25 TraesCS1A01G121300 chr3D 92.135 89 7 0 3566 3654 582913404 582913492 8.180000e-25 126.0
26 TraesCS1A01G121300 chr2D 95.884 413 16 1 7351 7763 13360234 13360645 0.000000e+00 667.0
27 TraesCS1A01G121300 chr2D 87.368 380 34 11 6988 7353 97626946 97626567 2.590000e-114 424.0
28 TraesCS1A01G121300 chr2D 91.133 203 10 5 655 849 633559827 633559625 1.280000e-67 268.0
29 TraesCS1A01G121300 chr2D 95.556 90 3 1 3567 3656 102881862 102881950 8.120000e-30 143.0
30 TraesCS1A01G121300 chr2D 92.308 91 5 1 3566 3656 350745847 350745759 2.270000e-25 128.0
31 TraesCS1A01G121300 chr2D 83.740 123 8 8 500 614 569089018 569089136 1.070000e-18 106.0
32 TraesCS1A01G121300 chr2D 86.792 53 5 2 4877 4927 382457311 382457363 3.030000e-04 58.4
33 TraesCS1A01G121300 chr4D 95.400 413 19 0 7351 7763 50033826 50034238 0.000000e+00 658.0
34 TraesCS1A01G121300 chr4D 93.705 413 25 1 7351 7763 441480771 441480360 1.110000e-172 617.0
35 TraesCS1A01G121300 chr4D 89.378 386 26 7 6982 7353 50033473 50033857 9.120000e-129 472.0
36 TraesCS1A01G121300 chr4D 89.710 379 25 3 6989 7353 441481118 441480740 9.120000e-129 472.0
37 TraesCS1A01G121300 chr4D 88.391 379 30 6 6989 7353 439286245 439285867 1.990000e-120 444.0
38 TraesCS1A01G121300 chr4D 92.391 92 5 1 3567 3658 266952288 266952377 6.320000e-26 130.0
39 TraesCS1A01G121300 chr4D 93.258 89 4 1 3564 3652 291470249 291470163 6.320000e-26 130.0
40 TraesCS1A01G121300 chr4D 100.000 32 0 0 6139 6170 500048804 500048773 8.410000e-05 60.2
41 TraesCS1A01G121300 chr4D 100.000 29 0 0 3567 3595 32346568 32346540 4.000000e-03 54.7
42 TraesCS1A01G121300 chr4D 94.444 36 1 1 6134 6169 372357073 372357107 4.000000e-03 54.7
43 TraesCS1A01G121300 chr7D 93.705 413 26 0 7351 7763 532622866 532623278 3.080000e-173 619.0
44 TraesCS1A01G121300 chr7D 89.764 381 25 6 6987 7353 566542280 566542660 7.050000e-130 475.0
45 TraesCS1A01G121300 chr7D 100.000 28 0 0 4877 4904 611816925 611816898 1.400000e-02 52.8
46 TraesCS1A01G121300 chr7B 93.705 413 26 0 7351 7763 105886167 105885755 3.080000e-173 619.0
47 TraesCS1A01G121300 chr7B 89.268 205 14 3 655 851 380078367 380078163 4.650000e-62 250.0
48 TraesCS1A01G121300 chr7B 81.481 81 9 5 5681 5760 607319019 607319094 2.340000e-05 62.1
49 TraesCS1A01G121300 chr2A 93.720 414 24 2 7351 7763 431077386 431076974 3.080000e-173 619.0
50 TraesCS1A01G121300 chr2A 89.418 378 26 6 6988 7351 431077734 431077357 1.530000e-126 464.0
51 TraesCS1A01G121300 chr2A 86.792 53 6 1 4877 4928 591280042 591279990 3.030000e-04 58.4
52 TraesCS1A01G121300 chr5D 88.684 380 29 6 6988 7353 319732143 319731764 1.190000e-122 451.0
53 TraesCS1A01G121300 chr5D 90.148 203 12 5 655 849 514456115 514455913 2.780000e-64 257.0
54 TraesCS1A01G121300 chr5D 92.045 88 5 1 3567 3654 505460678 505460763 1.060000e-23 122.0
55 TraesCS1A01G121300 chr5D 92.045 88 5 1 3567 3654 543347379 543347294 1.060000e-23 122.0
56 TraesCS1A01G121300 chr5D 85.981 107 14 1 384 489 319534510 319534616 6.370000e-21 113.0
57 TraesCS1A01G121300 chr5D 97.619 42 0 1 3567 3608 59830423 59830383 3.890000e-08 71.3
58 TraesCS1A01G121300 chr5D 100.000 34 0 0 3566 3599 327984131 327984164 6.500000e-06 63.9
59 TraesCS1A01G121300 chr5B 88.654 379 28 6 6989 7353 640095552 640095929 1.540000e-121 448.0
60 TraesCS1A01G121300 chr5B 88.158 380 31 4 6988 7353 455335939 455336318 2.570000e-119 440.0
61 TraesCS1A01G121300 chr5B 94.000 50 3 0 5714 5763 510559318 510559269 8.350000e-10 76.8
62 TraesCS1A01G121300 chr4B 88.281 384 29 5 6986 7353 167946975 167946592 5.530000e-121 446.0
63 TraesCS1A01G121300 chr4B 89.274 317 23 2 7048 7353 387517373 387517689 3.400000e-103 387.0
64 TraesCS1A01G121300 chr4B 89.109 202 15 3 655 849 315477280 315477079 2.160000e-60 244.0
65 TraesCS1A01G121300 chr4B 79.227 207 33 7 384 581 38276767 38276972 1.360000e-27 135.0
66 TraesCS1A01G121300 chr4B 93.258 89 4 1 3565 3653 144280465 144280551 6.320000e-26 130.0
67 TraesCS1A01G121300 chr4B 90.426 94 7 1 3566 3659 97072391 97072300 1.060000e-23 122.0
68 TraesCS1A01G121300 chr4B 96.970 33 1 0 6140 6172 517059658 517059626 1.000000e-03 56.5
69 TraesCS1A01G121300 chr4B 94.444 36 1 1 6134 6169 457408314 457408348 4.000000e-03 54.7
70 TraesCS1A01G121300 chr3B 88.329 377 28 9 6988 7350 830314340 830314714 9.250000e-119 438.0
71 TraesCS1A01G121300 chr3B 87.798 377 30 9 6988 7350 830604543 830604917 2.000000e-115 427.0
72 TraesCS1A01G121300 chr3B 90.640 203 11 5 655 849 680757087 680757289 5.970000e-66 263.0
73 TraesCS1A01G121300 chr3B 81.281 203 30 7 383 578 766637349 766637148 2.900000e-34 158.0
74 TraesCS1A01G121300 chr3B 94.318 88 3 1 3567 3654 277085658 277085743 4.890000e-27 134.0
75 TraesCS1A01G121300 chr3B 89.796 98 7 3 500 596 496693864 496693959 1.060000e-23 122.0
76 TraesCS1A01G121300 chr3B 84.426 122 8 8 501 614 788266720 788266838 8.240000e-20 110.0
77 TraesCS1A01G121300 chr3B 94.000 50 2 1 5714 5763 119077485 119077533 3.000000e-09 75.0
78 TraesCS1A01G121300 chr3B 92.453 53 3 1 5711 5763 714106390 714106441 3.000000e-09 75.0
79 TraesCS1A01G121300 chrUn 90.099 202 12 3 655 848 37078454 37078655 1.000000e-63 255.0
80 TraesCS1A01G121300 chrUn 100.000 27 0 0 3567 3593 365199836 365199810 5.100000e-02 51.0
81 TraesCS1A01G121300 chr4A 89.163 203 14 3 655 849 710287345 710287547 6.020000e-61 246.0
82 TraesCS1A01G121300 chr4A 86.957 69 6 3 5696 5763 638169957 638170023 3.000000e-09 75.0
83 TraesCS1A01G121300 chr4A 97.143 35 0 1 6174 6208 709048629 709048596 3.030000e-04 58.4
84 TraesCS1A01G121300 chr6B 89.055 201 14 3 655 847 548388627 548388427 7.780000e-60 243.0
85 TraesCS1A01G121300 chr6B 89.773 88 7 2 500 586 561277503 561277589 2.290000e-20 111.0
86 TraesCS1A01G121300 chr6B 92.000 50 4 0 4877 4926 94049763 94049812 3.890000e-08 71.3
87 TraesCS1A01G121300 chr6B 100.000 31 0 0 6139 6169 266745699 266745669 3.030000e-04 58.4
88 TraesCS1A01G121300 chr6A 83.663 202 26 6 382 577 610910832 610911032 4.780000e-42 183.0
89 TraesCS1A01G121300 chr6D 91.398 93 6 1 3566 3658 424720009 424719919 8.180000e-25 126.0
90 TraesCS1A01G121300 chr6D 100.000 30 0 0 6139 6168 4262253 4262224 1.000000e-03 56.5
91 TraesCS1A01G121300 chr3A 88.119 101 7 4 500 596 8568367 8568268 1.770000e-21 115.0
92 TraesCS1A01G121300 chr3A 94.231 52 2 1 5713 5763 51753230 51753281 2.320000e-10 78.7
93 TraesCS1A01G121300 chr3A 97.059 34 0 1 6174 6207 44635999 44635967 1.000000e-03 56.5
94 TraesCS1A01G121300 chr2B 100.000 45 0 0 5719 5763 37714390 37714346 4.990000e-12 84.2
95 TraesCS1A01G121300 chr7A 97.222 36 0 1 6174 6209 25522311 25522345 8.410000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G121300 chr1A 134942548 134950310 7762 False 14336.000000 14336 100.000000 1 7763 1 chr1A.!!$F1 7762
1 TraesCS1A01G121300 chr1D 122766701 122773421 6720 False 2665.750000 8288 92.818750 1 6989 4 chr1D.!!$F2 6988
2 TraesCS1A01G121300 chr1D 304847759 304848521 762 True 555.500000 658 92.071500 6987 7763 2 chr1D.!!$R3 776
3 TraesCS1A01G121300 chr1B 186796269 186802768 6499 False 3323.333333 5716 96.087333 845 6989 3 chr1B.!!$F4 6144
4 TraesCS1A01G121300 chr1B 186788671 186789230 559 False 520.000000 520 84.014000 39 581 1 chr1B.!!$F2 542
5 TraesCS1A01G121300 chr3D 313315363 313315907 544 True 723.000000 723 90.244000 7190 7763 1 chr3D.!!$R2 573
6 TraesCS1A01G121300 chr4D 50033473 50034238 765 False 565.000000 658 92.389000 6982 7763 2 chr4D.!!$F3 781
7 TraesCS1A01G121300 chr4D 441480360 441481118 758 True 544.500000 617 91.707500 6989 7763 2 chr4D.!!$R5 774
8 TraesCS1A01G121300 chr2A 431076974 431077734 760 True 541.500000 619 91.569000 6988 7763 2 chr2A.!!$R2 775

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
192 195 0.340208 GAGAGGGAAGGGAAGGAGGA 59.660 60.000 0.00 0.00 0.00 3.71 F
512 576 0.535335 ATGCACCGGTGACTTCGTAT 59.465 50.000 38.30 12.03 0.00 3.06 F
1386 1458 0.029989 GGGAGATGGGTAAGGGAGGT 60.030 60.000 0.00 0.00 0.00 3.85 F
2554 2692 0.240945 CCTTTTAGGTGCGCCAACTG 59.759 55.000 20.59 4.27 31.86 3.16 F
4037 4564 0.095417 GCAGAAATTCAGTCGACGGC 59.905 55.000 11.11 0.00 0.00 5.68 F
5174 5705 1.985159 TCCTGAGTTGCACATAACCCT 59.015 47.619 0.00 0.00 0.00 4.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1268 1340 0.613853 TCTTGAAGGATCGGGGTCGT 60.614 55.0 0.00 0.00 37.69 4.34 R
1472 1544 2.611292 GGCAAGAGTACACATCATCAGC 59.389 50.0 0.00 0.00 0.00 4.26 R
3299 3438 0.235665 CACACAACTGACACGATGCC 59.764 55.0 0.00 0.00 0.00 4.40 R
4396 4923 2.118228 TGCGTTGTGTCAAATGCTTC 57.882 45.0 10.98 0.00 41.67 3.86 R
5302 5840 1.549243 TATTCAGGGCAGGCGTGTGA 61.549 55.0 15.60 7.16 0.00 3.58 R
7053 7604 0.179134 GTTCGCAGCGAGTGGTAGAT 60.179 55.0 18.62 0.00 37.14 1.98 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 1.515521 CGCTCTGGTGGTGGGAAAAC 61.516 60.000 0.00 0.00 0.00 2.43
50 51 2.567985 GGAAAACAACTCTCCCAACGA 58.432 47.619 0.00 0.00 0.00 3.85
65 66 3.057174 CCCAACGATAGGAGAGATAGTGC 60.057 52.174 0.00 0.00 43.77 4.40
81 82 6.016555 AGATAGTGCCAACATAAGGGTTTTT 58.983 36.000 0.00 0.00 0.00 1.94
84 85 2.288518 TGCCAACATAAGGGTTTTTCGC 60.289 45.455 0.00 0.00 0.00 4.70
114 116 2.061220 CTGGAGCAACAGGTGGAGA 58.939 57.895 0.10 0.00 34.84 3.71
120 122 0.908198 GCAACAGGTGGAGAGAGGAT 59.092 55.000 0.00 0.00 0.00 3.24
160 163 3.300009 CAAGAGTGATTGGCGTTGAAAC 58.700 45.455 0.00 0.00 0.00 2.78
180 183 0.687354 GTGCCAAAGTGAGAGAGGGA 59.313 55.000 0.00 0.00 0.00 4.20
181 184 1.072331 GTGCCAAAGTGAGAGAGGGAA 59.928 52.381 0.00 0.00 0.00 3.97
182 185 1.349026 TGCCAAAGTGAGAGAGGGAAG 59.651 52.381 0.00 0.00 0.00 3.46
183 186 1.339535 GCCAAAGTGAGAGAGGGAAGG 60.340 57.143 0.00 0.00 0.00 3.46
184 187 1.280421 CCAAAGTGAGAGAGGGAAGGG 59.720 57.143 0.00 0.00 0.00 3.95
185 188 2.260822 CAAAGTGAGAGAGGGAAGGGA 58.739 52.381 0.00 0.00 0.00 4.20
186 189 2.639839 CAAAGTGAGAGAGGGAAGGGAA 59.360 50.000 0.00 0.00 0.00 3.97
192 195 0.340208 GAGAGGGAAGGGAAGGAGGA 59.660 60.000 0.00 0.00 0.00 3.71
194 197 1.371415 AGAGGGAAGGGAAGGAGGAAT 59.629 52.381 0.00 0.00 0.00 3.01
211 231 1.649271 AATGGAGGGGGAGATGTGCC 61.649 60.000 0.00 0.00 0.00 5.01
215 235 2.520260 GGGGGAGATGTGCCATGC 60.520 66.667 1.98 0.00 35.30 4.06
261 282 1.303317 ACAAGCCAATGTCGACCCC 60.303 57.895 14.12 0.00 0.00 4.95
276 297 0.965363 ACCCCGTGTCATCCATTTGC 60.965 55.000 0.00 0.00 0.00 3.68
308 329 3.753272 GCAATGCACGGATATCCAACTAT 59.247 43.478 21.70 7.53 35.14 2.12
373 394 9.239551 GTAGGTTTACCTCAGGTCAAAATTATT 57.760 33.333 0.00 0.00 44.77 1.40
433 454 2.375174 TGGACAGTGGTATTTTCAGCCT 59.625 45.455 0.00 0.00 0.00 4.58
450 472 0.618981 CCTACCAGGGTTCAAGTCCC 59.381 60.000 0.00 0.00 44.90 4.46
481 503 8.408043 TCGCATTTATCCTGGATTTATTTCAT 57.592 30.769 15.55 0.00 0.00 2.57
491 513 7.782644 TCCTGGATTTATTTCATAATTTCCGGT 59.217 33.333 0.00 0.00 34.80 5.28
512 576 0.535335 ATGCACCGGTGACTTCGTAT 59.465 50.000 38.30 12.03 0.00 3.06
548 612 1.431440 CCGGCTCAGTCTCTCGAAG 59.569 63.158 0.00 0.00 0.00 3.79
554 618 1.543802 CTCAGTCTCTCGAAGGTGCTT 59.456 52.381 0.00 0.00 0.00 3.91
560 624 3.004944 GTCTCTCGAAGGTGCTTATAGGG 59.995 52.174 0.00 0.00 0.00 3.53
565 629 3.117398 TCGAAGGTGCTTATAGGGTAGGA 60.117 47.826 0.00 0.00 0.00 2.94
589 653 4.253685 GTGTGTTGTGTATATGAGCACCT 58.746 43.478 0.00 0.00 34.94 4.00
606 670 3.554960 GCACCTGTGTCTCTGTATTGACA 60.555 47.826 0.00 0.00 40.39 3.58
663 728 2.666317 CCCCCATACTTTTAGGCCTTG 58.334 52.381 12.58 0.00 0.00 3.61
664 729 2.024369 CCCCCATACTTTTAGGCCTTGT 60.024 50.000 12.58 8.12 0.00 3.16
665 730 3.203487 CCCCCATACTTTTAGGCCTTGTA 59.797 47.826 12.58 10.23 0.00 2.41
666 731 4.204799 CCCCATACTTTTAGGCCTTGTAC 58.795 47.826 12.58 0.00 0.00 2.90
667 732 4.324719 CCCCATACTTTTAGGCCTTGTACA 60.325 45.833 12.58 0.00 0.00 2.90
668 733 5.258051 CCCATACTTTTAGGCCTTGTACAA 58.742 41.667 12.58 8.28 0.00 2.41
669 734 5.891551 CCCATACTTTTAGGCCTTGTACAAT 59.108 40.000 12.58 0.00 0.00 2.71
670 735 6.183360 CCCATACTTTTAGGCCTTGTACAATG 60.183 42.308 12.58 7.68 0.00 2.82
671 736 6.183360 CCATACTTTTAGGCCTTGTACAATGG 60.183 42.308 12.58 14.48 0.00 3.16
672 737 4.993028 ACTTTTAGGCCTTGTACAATGGA 58.007 39.130 12.58 4.78 0.00 3.41
673 738 5.010282 ACTTTTAGGCCTTGTACAATGGAG 58.990 41.667 12.58 13.46 0.00 3.86
674 739 3.644966 TTAGGCCTTGTACAATGGAGG 57.355 47.619 12.58 15.10 0.00 4.30
675 740 1.372501 AGGCCTTGTACAATGGAGGT 58.627 50.000 21.28 7.45 0.00 3.85
676 741 1.004745 AGGCCTTGTACAATGGAGGTG 59.995 52.381 21.28 5.34 0.00 4.00
677 742 1.271926 GGCCTTGTACAATGGAGGTGT 60.272 52.381 21.28 0.00 0.00 4.16
678 743 2.514803 GCCTTGTACAATGGAGGTGTT 58.485 47.619 21.28 0.00 0.00 3.32
679 744 2.890945 GCCTTGTACAATGGAGGTGTTT 59.109 45.455 21.28 0.00 0.00 2.83
680 745 4.076394 GCCTTGTACAATGGAGGTGTTTA 58.924 43.478 21.28 0.00 0.00 2.01
681 746 4.156008 GCCTTGTACAATGGAGGTGTTTAG 59.844 45.833 21.28 2.69 0.00 1.85
682 747 5.556915 CCTTGTACAATGGAGGTGTTTAGA 58.443 41.667 9.13 0.00 0.00 2.10
683 748 5.643777 CCTTGTACAATGGAGGTGTTTAGAG 59.356 44.000 9.13 0.00 0.00 2.43
684 749 6.428083 TTGTACAATGGAGGTGTTTAGAGA 57.572 37.500 3.59 0.00 0.00 3.10
685 750 6.037786 TGTACAATGGAGGTGTTTAGAGAG 57.962 41.667 0.00 0.00 0.00 3.20
686 751 4.559862 ACAATGGAGGTGTTTAGAGAGG 57.440 45.455 0.00 0.00 0.00 3.69
687 752 3.910627 ACAATGGAGGTGTTTAGAGAGGT 59.089 43.478 0.00 0.00 0.00 3.85
688 753 4.256920 CAATGGAGGTGTTTAGAGAGGTG 58.743 47.826 0.00 0.00 0.00 4.00
689 754 1.623811 TGGAGGTGTTTAGAGAGGTGC 59.376 52.381 0.00 0.00 0.00 5.01
690 755 1.903183 GGAGGTGTTTAGAGAGGTGCT 59.097 52.381 0.00 0.00 0.00 4.40
691 756 2.303311 GGAGGTGTTTAGAGAGGTGCTT 59.697 50.000 0.00 0.00 0.00 3.91
692 757 3.514309 GGAGGTGTTTAGAGAGGTGCTTA 59.486 47.826 0.00 0.00 0.00 3.09
693 758 4.382147 GGAGGTGTTTAGAGAGGTGCTTAG 60.382 50.000 0.00 0.00 0.00 2.18
694 759 3.515901 AGGTGTTTAGAGAGGTGCTTAGG 59.484 47.826 0.00 0.00 0.00 2.69
695 760 3.514309 GGTGTTTAGAGAGGTGCTTAGGA 59.486 47.826 0.00 0.00 0.00 2.94
696 761 4.020485 GGTGTTTAGAGAGGTGCTTAGGAA 60.020 45.833 0.00 0.00 0.00 3.36
697 762 5.512576 GGTGTTTAGAGAGGTGCTTAGGAAA 60.513 44.000 0.00 0.00 0.00 3.13
698 763 5.995897 GTGTTTAGAGAGGTGCTTAGGAAAA 59.004 40.000 0.00 0.00 0.00 2.29
699 764 6.655425 GTGTTTAGAGAGGTGCTTAGGAAAAT 59.345 38.462 0.00 0.00 0.00 1.82
700 765 7.822822 GTGTTTAGAGAGGTGCTTAGGAAAATA 59.177 37.037 0.00 0.00 0.00 1.40
701 766 8.380099 TGTTTAGAGAGGTGCTTAGGAAAATAA 58.620 33.333 0.00 0.00 0.00 1.40
702 767 9.227777 GTTTAGAGAGGTGCTTAGGAAAATAAA 57.772 33.333 0.00 0.00 0.00 1.40
703 768 9.975218 TTTAGAGAGGTGCTTAGGAAAATAAAT 57.025 29.630 0.00 0.00 0.00 1.40
704 769 9.614792 TTAGAGAGGTGCTTAGGAAAATAAATC 57.385 33.333 0.00 0.00 0.00 2.17
705 770 6.763610 AGAGAGGTGCTTAGGAAAATAAATCG 59.236 38.462 0.00 0.00 0.00 3.34
706 771 6.650120 AGAGGTGCTTAGGAAAATAAATCGA 58.350 36.000 0.00 0.00 0.00 3.59
707 772 7.110155 AGAGGTGCTTAGGAAAATAAATCGAA 58.890 34.615 0.00 0.00 0.00 3.71
708 773 7.775561 AGAGGTGCTTAGGAAAATAAATCGAAT 59.224 33.333 0.00 0.00 0.00 3.34
709 774 8.293699 AGGTGCTTAGGAAAATAAATCGAATT 57.706 30.769 0.00 0.00 0.00 2.17
710 775 8.749354 AGGTGCTTAGGAAAATAAATCGAATTT 58.251 29.630 0.00 0.00 36.29 1.82
711 776 9.366216 GGTGCTTAGGAAAATAAATCGAATTTT 57.634 29.630 6.09 6.09 38.82 1.82
719 784 9.958285 GGAAAATAAATCGAATTTTTCTGAAGC 57.042 29.630 17.38 3.41 36.82 3.86
722 787 8.466086 AATAAATCGAATTTTTCTGAAGCACC 57.534 30.769 0.00 0.00 33.82 5.01
723 788 3.536158 TCGAATTTTTCTGAAGCACCG 57.464 42.857 0.00 0.00 0.00 4.94
724 789 2.225491 TCGAATTTTTCTGAAGCACCGG 59.775 45.455 0.00 0.00 0.00 5.28
725 790 2.031157 CGAATTTTTCTGAAGCACCGGT 60.031 45.455 0.00 0.00 0.00 5.28
726 791 3.187637 CGAATTTTTCTGAAGCACCGGTA 59.812 43.478 6.87 0.00 0.00 4.02
727 792 4.473199 GAATTTTTCTGAAGCACCGGTAC 58.527 43.478 6.87 0.00 0.00 3.34
728 793 1.886886 TTTTCTGAAGCACCGGTACC 58.113 50.000 6.87 0.16 0.00 3.34
729 794 1.053424 TTTCTGAAGCACCGGTACCT 58.947 50.000 6.87 3.46 0.00 3.08
730 795 1.927487 TTCTGAAGCACCGGTACCTA 58.073 50.000 6.87 0.00 0.00 3.08
731 796 2.154567 TCTGAAGCACCGGTACCTAT 57.845 50.000 6.87 0.00 0.00 2.57
732 797 2.463752 TCTGAAGCACCGGTACCTATT 58.536 47.619 6.87 0.00 0.00 1.73
733 798 2.835764 TCTGAAGCACCGGTACCTATTT 59.164 45.455 6.87 0.00 0.00 1.40
734 799 3.118884 TCTGAAGCACCGGTACCTATTTC 60.119 47.826 6.87 1.77 0.00 2.17
735 800 2.835764 TGAAGCACCGGTACCTATTTCT 59.164 45.455 6.87 0.00 0.00 2.52
736 801 4.025360 TGAAGCACCGGTACCTATTTCTA 58.975 43.478 6.87 0.00 0.00 2.10
737 802 4.142093 TGAAGCACCGGTACCTATTTCTAC 60.142 45.833 6.87 0.00 0.00 2.59
738 803 3.368248 AGCACCGGTACCTATTTCTACA 58.632 45.455 6.87 0.00 0.00 2.74
739 804 3.383825 AGCACCGGTACCTATTTCTACAG 59.616 47.826 6.87 0.00 0.00 2.74
740 805 3.382546 GCACCGGTACCTATTTCTACAGA 59.617 47.826 6.87 0.00 0.00 3.41
741 806 4.142093 GCACCGGTACCTATTTCTACAGAA 60.142 45.833 6.87 0.00 0.00 3.02
742 807 5.589192 CACCGGTACCTATTTCTACAGAAG 58.411 45.833 6.87 0.00 35.21 2.85
743 808 5.359009 CACCGGTACCTATTTCTACAGAAGA 59.641 44.000 6.87 0.00 35.21 2.87
744 809 5.593502 ACCGGTACCTATTTCTACAGAAGAG 59.406 44.000 4.49 0.00 35.05 2.85
745 810 5.826737 CCGGTACCTATTTCTACAGAAGAGA 59.173 44.000 10.90 0.00 35.05 3.10
746 811 6.238703 CCGGTACCTATTTCTACAGAAGAGAC 60.239 46.154 10.90 0.00 35.05 3.36
747 812 6.511444 CGGTACCTATTTCTACAGAAGAGACG 60.511 46.154 10.90 0.00 35.05 4.18
748 813 5.251601 ACCTATTTCTACAGAAGAGACGC 57.748 43.478 5.12 0.00 35.05 5.19
749 814 4.951094 ACCTATTTCTACAGAAGAGACGCT 59.049 41.667 5.12 0.00 35.05 5.07
750 815 5.419471 ACCTATTTCTACAGAAGAGACGCTT 59.581 40.000 0.00 0.00 40.25 4.68
751 816 6.602406 ACCTATTTCTACAGAAGAGACGCTTA 59.398 38.462 0.00 0.00 36.83 3.09
752 817 7.136119 CCTATTTCTACAGAAGAGACGCTTAG 58.864 42.308 0.00 0.00 36.83 2.18
753 818 5.961396 TTTCTACAGAAGAGACGCTTAGT 57.039 39.130 0.00 0.00 36.83 2.24
754 819 5.961396 TTCTACAGAAGAGACGCTTAGTT 57.039 39.130 0.00 0.00 36.83 2.24
755 820 7.444629 TTTCTACAGAAGAGACGCTTAGTTA 57.555 36.000 0.00 0.00 36.83 2.24
756 821 7.444629 TTCTACAGAAGAGACGCTTAGTTAA 57.555 36.000 0.00 0.00 36.83 2.01
757 822 7.074507 TCTACAGAAGAGACGCTTAGTTAAG 57.925 40.000 0.00 0.00 36.83 1.85
758 823 7.837732 TTCTACAGAAGAGACGCTTAGTTAAGC 60.838 40.741 12.72 12.72 44.03 3.09
772 837 7.024340 CTTAGTTAAGCGTCTATCCTGTACA 57.976 40.000 0.00 0.00 0.00 2.90
773 838 5.909621 AGTTAAGCGTCTATCCTGTACAA 57.090 39.130 0.00 0.00 0.00 2.41
774 839 6.276832 AGTTAAGCGTCTATCCTGTACAAA 57.723 37.500 0.00 0.00 0.00 2.83
775 840 6.875076 AGTTAAGCGTCTATCCTGTACAAAT 58.125 36.000 0.00 0.00 0.00 2.32
776 841 8.004087 AGTTAAGCGTCTATCCTGTACAAATA 57.996 34.615 0.00 0.00 0.00 1.40
777 842 8.472413 AGTTAAGCGTCTATCCTGTACAAATAA 58.528 33.333 0.00 0.00 0.00 1.40
778 843 8.753175 GTTAAGCGTCTATCCTGTACAAATAAG 58.247 37.037 0.00 0.00 0.00 1.73
779 844 5.290386 AGCGTCTATCCTGTACAAATAAGC 58.710 41.667 0.00 4.79 0.00 3.09
780 845 5.047847 GCGTCTATCCTGTACAAATAAGCA 58.952 41.667 0.00 0.00 0.00 3.91
781 846 5.050972 GCGTCTATCCTGTACAAATAAGCAC 60.051 44.000 0.00 0.00 0.00 4.40
782 847 5.462398 CGTCTATCCTGTACAAATAAGCACC 59.538 44.000 0.00 0.00 0.00 5.01
783 848 5.462398 GTCTATCCTGTACAAATAAGCACCG 59.538 44.000 0.00 0.00 0.00 4.94
784 849 2.980568 TCCTGTACAAATAAGCACCGG 58.019 47.619 0.00 0.00 0.00 5.28
785 850 2.303600 TCCTGTACAAATAAGCACCGGT 59.696 45.455 0.00 0.00 0.00 5.28
786 851 2.418628 CCTGTACAAATAAGCACCGGTG 59.581 50.000 30.66 30.66 0.00 4.94
799 864 3.007979 CACCGGTGCTTAAGAAAAACC 57.992 47.619 24.02 6.81 0.00 3.27
800 865 2.621526 CACCGGTGCTTAAGAAAAACCT 59.378 45.455 24.02 0.00 0.00 3.50
801 866 2.621526 ACCGGTGCTTAAGAAAAACCTG 59.378 45.455 6.12 6.78 0.00 4.00
802 867 2.030274 CCGGTGCTTAAGAAAAACCTGG 60.030 50.000 6.67 9.28 0.00 4.45
803 868 2.621526 CGGTGCTTAAGAAAAACCTGGT 59.378 45.455 6.67 0.00 0.00 4.00
804 869 3.067601 CGGTGCTTAAGAAAAACCTGGTT 59.932 43.478 6.18 6.18 0.00 3.67
805 870 4.440940 CGGTGCTTAAGAAAAACCTGGTTT 60.441 41.667 18.84 18.84 37.34 3.27
806 871 5.047847 GGTGCTTAAGAAAAACCTGGTTTC 58.952 41.667 24.02 13.54 34.43 2.78
807 872 5.163447 GGTGCTTAAGAAAAACCTGGTTTCT 60.163 40.000 24.02 15.56 45.14 2.52
808 873 5.977725 GTGCTTAAGAAAAACCTGGTTTCTC 59.022 40.000 24.02 19.95 43.00 2.87
809 874 5.891551 TGCTTAAGAAAAACCTGGTTTCTCT 59.108 36.000 24.02 21.84 43.00 3.10
810 875 7.012989 GTGCTTAAGAAAAACCTGGTTTCTCTA 59.987 37.037 24.34 11.92 43.00 2.43
811 876 7.558444 TGCTTAAGAAAAACCTGGTTTCTCTAA 59.442 33.333 24.34 17.43 43.00 2.10
812 877 8.076781 GCTTAAGAAAAACCTGGTTTCTCTAAG 58.923 37.037 24.34 23.67 43.00 2.18
813 878 6.392625 AAGAAAAACCTGGTTTCTCTAAGC 57.607 37.500 24.34 10.35 43.00 3.09
814 879 5.445964 AGAAAAACCTGGTTTCTCTAAGCA 58.554 37.500 23.18 0.00 40.50 3.91
815 880 5.299531 AGAAAAACCTGGTTTCTCTAAGCAC 59.700 40.000 23.18 8.98 40.50 4.40
816 881 2.861147 ACCTGGTTTCTCTAAGCACC 57.139 50.000 0.00 0.00 39.21 5.01
817 882 1.351350 ACCTGGTTTCTCTAAGCACCC 59.649 52.381 0.00 0.00 39.21 4.61
818 883 1.340114 CCTGGTTTCTCTAAGCACCCC 60.340 57.143 0.00 0.00 39.21 4.95
819 884 1.630878 CTGGTTTCTCTAAGCACCCCT 59.369 52.381 0.00 0.00 39.21 4.79
820 885 2.838202 CTGGTTTCTCTAAGCACCCCTA 59.162 50.000 0.00 0.00 39.21 3.53
821 886 3.253220 TGGTTTCTCTAAGCACCCCTAA 58.747 45.455 0.00 0.00 39.21 2.69
822 887 3.653836 TGGTTTCTCTAAGCACCCCTAAA 59.346 43.478 0.00 0.00 39.21 1.85
823 888 4.008330 GGTTTCTCTAAGCACCCCTAAAC 58.992 47.826 0.00 0.00 34.37 2.01
824 889 4.506095 GGTTTCTCTAAGCACCCCTAAACA 60.506 45.833 0.00 0.00 34.37 2.83
825 890 5.254115 GTTTCTCTAAGCACCCCTAAACAT 58.746 41.667 0.00 0.00 0.00 2.71
826 891 4.755266 TCTCTAAGCACCCCTAAACATC 57.245 45.455 0.00 0.00 0.00 3.06
827 892 4.362677 TCTCTAAGCACCCCTAAACATCT 58.637 43.478 0.00 0.00 0.00 2.90
828 893 4.406003 TCTCTAAGCACCCCTAAACATCTC 59.594 45.833 0.00 0.00 0.00 2.75
829 894 2.808906 AAGCACCCCTAAACATCTCC 57.191 50.000 0.00 0.00 0.00 3.71
830 895 0.919710 AGCACCCCTAAACATCTCCC 59.080 55.000 0.00 0.00 0.00 4.30
831 896 0.623723 GCACCCCTAAACATCTCCCA 59.376 55.000 0.00 0.00 0.00 4.37
832 897 1.215423 GCACCCCTAAACATCTCCCAT 59.785 52.381 0.00 0.00 0.00 4.00
833 898 2.358195 GCACCCCTAAACATCTCCCATT 60.358 50.000 0.00 0.00 0.00 3.16
834 899 3.290710 CACCCCTAAACATCTCCCATTG 58.709 50.000 0.00 0.00 0.00 2.82
835 900 2.926329 ACCCCTAAACATCTCCCATTGT 59.074 45.455 0.00 0.00 0.00 2.71
836 901 4.080015 CACCCCTAAACATCTCCCATTGTA 60.080 45.833 0.00 0.00 0.00 2.41
837 902 4.079958 ACCCCTAAACATCTCCCATTGTAC 60.080 45.833 0.00 0.00 0.00 2.90
838 903 4.080015 CCCCTAAACATCTCCCATTGTACA 60.080 45.833 0.00 0.00 0.00 2.90
839 904 5.505780 CCCTAAACATCTCCCATTGTACAA 58.494 41.667 11.41 11.41 0.00 2.41
840 905 5.590259 CCCTAAACATCTCCCATTGTACAAG 59.410 44.000 14.65 6.30 0.00 3.16
841 906 6.414732 CCTAAACATCTCCCATTGTACAAGA 58.585 40.000 14.65 5.55 0.00 3.02
842 907 6.316390 CCTAAACATCTCCCATTGTACAAGAC 59.684 42.308 14.65 0.00 0.00 3.01
843 908 4.222124 ACATCTCCCATTGTACAAGACC 57.778 45.455 14.65 0.00 0.00 3.85
895 960 4.941609 CATCCGACTTGGGTGGAG 57.058 61.111 0.00 0.00 45.93 3.86
896 961 1.450312 CATCCGACTTGGGTGGAGC 60.450 63.158 0.00 0.00 45.93 4.70
897 962 1.918293 ATCCGACTTGGGTGGAGCA 60.918 57.895 0.00 0.00 38.76 4.26
898 963 1.903877 ATCCGACTTGGGTGGAGCAG 61.904 60.000 0.00 0.00 38.76 4.24
899 964 2.743928 CGACTTGGGTGGAGCAGC 60.744 66.667 0.00 0.00 0.00 5.25
1071 1142 2.927856 ACCTCCACCGGCATCACA 60.928 61.111 0.00 0.00 0.00 3.58
1268 1340 7.094720 GCAGCTACTATCCTCTATCGAAAACTA 60.095 40.741 0.00 0.00 0.00 2.24
1272 1344 7.188468 ACTATCCTCTATCGAAAACTACGAC 57.812 40.000 0.00 0.00 42.37 4.34
1305 1377 2.359975 GGCAGGAAGGTGGTTCGG 60.360 66.667 0.00 0.00 35.80 4.30
1386 1458 0.029989 GGGAGATGGGTAAGGGAGGT 60.030 60.000 0.00 0.00 0.00 3.85
1472 1544 4.406003 ACCCTTAGTCTTAGCCATGTACTG 59.594 45.833 0.00 0.00 0.00 2.74
1508 1582 4.275936 ACTCTTGCCATTAGTTTGACACAC 59.724 41.667 0.00 0.00 0.00 3.82
1509 1583 4.203226 TCTTGCCATTAGTTTGACACACA 58.797 39.130 0.00 0.00 0.00 3.72
1568 1642 8.826710 TCAAAATTGGAAGTACATGATACGATC 58.173 33.333 0.00 3.35 0.00 3.69
1710 1785 5.181690 TGTTTACATGGCTTGTTGACTTC 57.818 39.130 11.53 0.00 39.87 3.01
1741 1816 2.497273 GGCTTCCAGCAAATATGTGGTT 59.503 45.455 0.00 0.00 44.75 3.67
1768 1843 9.986833 GCTTTATTTTGGCAAGTAATATTTTGG 57.013 29.630 0.00 0.00 0.00 3.28
2108 2184 9.620259 ATTTCCTATTATTCTTGTGAGTTCCTC 57.380 33.333 0.00 0.00 0.00 3.71
2109 2185 7.979786 TCCTATTATTCTTGTGAGTTCCTCT 57.020 36.000 0.00 0.00 0.00 3.69
2110 2186 8.380742 TCCTATTATTCTTGTGAGTTCCTCTT 57.619 34.615 0.00 0.00 0.00 2.85
2111 2187 8.826765 TCCTATTATTCTTGTGAGTTCCTCTTT 58.173 33.333 0.00 0.00 0.00 2.52
2118 2194 8.833231 TTCTTGTGAGTTCCTCTTTAGTAATG 57.167 34.615 0.00 0.00 0.00 1.90
2119 2195 7.963532 TCTTGTGAGTTCCTCTTTAGTAATGT 58.036 34.615 0.00 0.00 0.00 2.71
2120 2196 7.872993 TCTTGTGAGTTCCTCTTTAGTAATGTG 59.127 37.037 0.00 0.00 0.00 3.21
2121 2197 6.464222 TGTGAGTTCCTCTTTAGTAATGTGG 58.536 40.000 9.53 9.53 0.00 4.17
2122 2198 5.351740 GTGAGTTCCTCTTTAGTAATGTGGC 59.648 44.000 10.55 1.31 0.00 5.01
2123 2199 4.844884 AGTTCCTCTTTAGTAATGTGGCC 58.155 43.478 0.00 0.00 0.00 5.36
2124 2200 4.536489 AGTTCCTCTTTAGTAATGTGGCCT 59.464 41.667 3.32 7.22 0.00 5.19
2125 2201 5.014228 AGTTCCTCTTTAGTAATGTGGCCTT 59.986 40.000 3.32 0.00 0.00 4.35
2126 2202 5.514500 TCCTCTTTAGTAATGTGGCCTTT 57.486 39.130 3.32 0.00 0.00 3.11
2127 2203 5.253330 TCCTCTTTAGTAATGTGGCCTTTG 58.747 41.667 3.32 0.00 0.00 2.77
2128 2204 4.142381 CCTCTTTAGTAATGTGGCCTTTGC 60.142 45.833 3.32 0.00 0.00 3.68
2129 2205 4.402829 TCTTTAGTAATGTGGCCTTTGCA 58.597 39.130 3.32 0.00 40.13 4.08
2130 2206 5.016173 TCTTTAGTAATGTGGCCTTTGCAT 58.984 37.500 3.32 0.25 40.13 3.96
2131 2207 5.480073 TCTTTAGTAATGTGGCCTTTGCATT 59.520 36.000 3.32 11.80 40.13 3.56
2132 2208 3.874392 AGTAATGTGGCCTTTGCATTC 57.126 42.857 3.32 4.77 40.13 2.67
2133 2209 3.434309 AGTAATGTGGCCTTTGCATTCT 58.566 40.909 3.32 6.66 40.13 2.40
2134 2210 3.834231 AGTAATGTGGCCTTTGCATTCTT 59.166 39.130 3.32 0.00 40.13 2.52
2135 2211 3.775261 AATGTGGCCTTTGCATTCTTT 57.225 38.095 3.32 0.00 40.13 2.52
2136 2212 3.775261 ATGTGGCCTTTGCATTCTTTT 57.225 38.095 3.32 0.00 40.13 2.27
2137 2213 3.110447 TGTGGCCTTTGCATTCTTTTC 57.890 42.857 3.32 0.00 40.13 2.29
2138 2214 2.699846 TGTGGCCTTTGCATTCTTTTCT 59.300 40.909 3.32 0.00 40.13 2.52
2139 2215 3.243839 TGTGGCCTTTGCATTCTTTTCTC 60.244 43.478 3.32 0.00 40.13 2.87
2140 2216 3.006217 GTGGCCTTTGCATTCTTTTCTCT 59.994 43.478 3.32 0.00 40.13 3.10
2141 2217 3.256631 TGGCCTTTGCATTCTTTTCTCTC 59.743 43.478 3.32 0.00 40.13 3.20
2142 2218 3.509184 GGCCTTTGCATTCTTTTCTCTCT 59.491 43.478 0.00 0.00 40.13 3.10
2143 2219 4.380339 GGCCTTTGCATTCTTTTCTCTCTC 60.380 45.833 0.00 0.00 40.13 3.20
2144 2220 4.458642 GCCTTTGCATTCTTTTCTCTCTCT 59.541 41.667 0.00 0.00 37.47 3.10
2145 2221 5.048154 GCCTTTGCATTCTTTTCTCTCTCTT 60.048 40.000 0.00 0.00 37.47 2.85
2146 2222 6.516360 GCCTTTGCATTCTTTTCTCTCTCTTT 60.516 38.462 0.00 0.00 37.47 2.52
2147 2223 7.432059 CCTTTGCATTCTTTTCTCTCTCTTTT 58.568 34.615 0.00 0.00 0.00 2.27
2295 2409 3.065648 TGGACGAATCACATGATGCATTG 59.934 43.478 0.00 0.00 34.49 2.82
2487 2625 7.582435 TTTCTTTGCTAAGTACTCATCTTCG 57.418 36.000 7.77 0.00 32.98 3.79
2554 2692 0.240945 CCTTTTAGGTGCGCCAACTG 59.759 55.000 20.59 4.27 31.86 3.16
2660 2798 5.569413 TGCGACAACTTCTTTTTCTTCTTC 58.431 37.500 0.00 0.00 0.00 2.87
2839 2977 7.755822 CCTACTTCTAGACATTATTGATACGCC 59.244 40.741 0.00 0.00 0.00 5.68
2878 3016 6.792326 AGTTTTCAGTTACTTTGTGTTAGCC 58.208 36.000 0.00 0.00 0.00 3.93
2879 3017 6.602009 AGTTTTCAGTTACTTTGTGTTAGCCT 59.398 34.615 0.00 0.00 0.00 4.58
2880 3018 6.371809 TTTCAGTTACTTTGTGTTAGCCTG 57.628 37.500 0.00 0.00 0.00 4.85
2881 3019 5.031066 TCAGTTACTTTGTGTTAGCCTGT 57.969 39.130 0.00 0.00 0.00 4.00
2882 3020 5.433526 TCAGTTACTTTGTGTTAGCCTGTT 58.566 37.500 0.00 0.00 0.00 3.16
2883 3021 6.584488 TCAGTTACTTTGTGTTAGCCTGTTA 58.416 36.000 0.00 0.00 0.00 2.41
2884 3022 6.704493 TCAGTTACTTTGTGTTAGCCTGTTAG 59.296 38.462 0.00 0.00 0.00 2.34
3283 3422 6.127758 GCCCATGTCACTTTGTGTTGATTATA 60.128 38.462 0.00 0.00 34.79 0.98
3299 3438 8.034215 TGTTGATTATACCAGCAAAATTTCCTG 58.966 33.333 10.36 10.36 0.00 3.86
3336 3476 4.082679 TGTGTGTGGTCAAACAAACTTACC 60.083 41.667 0.00 0.00 38.66 2.85
3392 3532 4.922206 TGTTTTTGCAGGAGTATCAGGAT 58.078 39.130 0.00 0.00 36.25 3.24
3495 4013 5.550232 TTATGCTTGTGTAATGCTCACAG 57.450 39.130 0.00 0.00 44.71 3.66
3679 4197 3.118629 TGCTCTTCTCGAAACTGCCATAT 60.119 43.478 0.00 0.00 0.00 1.78
3838 4356 4.709397 AGAGCTCTCTTGCTGTAAGTACAT 59.291 41.667 11.45 0.00 44.17 2.29
3869 4387 0.100503 AGTTCCGCACTGCAAAACAC 59.899 50.000 14.63 0.00 32.83 3.32
3878 4396 1.134175 ACTGCAAAACACCTGTTTCCG 59.866 47.619 3.92 0.92 46.47 4.30
4037 4564 0.095417 GCAGAAATTCAGTCGACGGC 59.905 55.000 11.11 0.00 0.00 5.68
4159 4686 4.697828 TGTTGTGTGCAGAAAGAACAGTTA 59.302 37.500 3.40 0.00 36.09 2.24
4329 4856 6.969043 TGGTTTGATTGTCATATAGGAGGTT 58.031 36.000 0.00 0.00 0.00 3.50
4396 4923 4.058124 TGATAATTACGCAGGCTGCTAAG 58.942 43.478 34.17 22.41 42.25 2.18
4600 5127 7.144722 TGACAAGATTAGGTGCAATAACTTG 57.855 36.000 19.67 19.67 39.17 3.16
4869 5399 8.403236 ACTAAATAGAAGACGTTTGCAAAAACT 58.597 29.630 14.67 10.46 0.00 2.66
5027 5558 5.367945 TCACTTAGAAAGGGTTCTGTTGT 57.632 39.130 0.00 0.00 44.12 3.32
5083 5614 3.441572 CCAACAAACTCTGCTGGGAATAG 59.558 47.826 0.00 0.00 37.59 1.73
5150 5681 3.056962 ACGCAATTGTGTGATAAATGCCA 60.057 39.130 23.26 0.00 38.69 4.92
5174 5705 1.985159 TCCTGAGTTGCACATAACCCT 59.015 47.619 0.00 0.00 0.00 4.34
5302 5840 5.777802 TGCACAAATTCACAATTACCGAAT 58.222 33.333 0.00 0.00 0.00 3.34
5448 5987 5.762179 ATTCCTTCAGTATGGTGAGTTCA 57.238 39.130 0.00 0.00 36.16 3.18
5674 6216 2.618709 GACCTTTATGTGTAGGCCATGC 59.381 50.000 5.01 0.00 34.79 4.06
5731 6273 3.178539 GCGTTTGCAGCTACTCCC 58.821 61.111 0.00 0.00 42.15 4.30
5733 6275 1.362406 GCGTTTGCAGCTACTCCCTC 61.362 60.000 0.00 0.00 42.15 4.30
5734 6276 0.741221 CGTTTGCAGCTACTCCCTCC 60.741 60.000 0.00 0.00 0.00 4.30
5735 6277 0.741221 GTTTGCAGCTACTCCCTCCG 60.741 60.000 0.00 0.00 0.00 4.63
5738 6280 1.142097 GCAGCTACTCCCTCCGTTC 59.858 63.158 0.00 0.00 0.00 3.95
5739 6281 1.817209 CAGCTACTCCCTCCGTTCC 59.183 63.158 0.00 0.00 0.00 3.62
5741 6283 0.252103 AGCTACTCCCTCCGTTCCAA 60.252 55.000 0.00 0.00 0.00 3.53
5742 6284 0.611714 GCTACTCCCTCCGTTCCAAA 59.388 55.000 0.00 0.00 0.00 3.28
5743 6285 1.002773 GCTACTCCCTCCGTTCCAAAA 59.997 52.381 0.00 0.00 0.00 2.44
5746 6288 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
5749 6291 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
5750 6292 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
5751 6293 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
5752 6294 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
5753 6295 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
5754 6296 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
5755 6297 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
5756 6298 4.142469 CCGTTCCAAAATAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
5757 6299 4.700213 CGTTCCAAAATAGATGACCCAACT 59.300 41.667 0.00 0.00 0.00 3.16
5758 6300 5.183140 CGTTCCAAAATAGATGACCCAACTT 59.817 40.000 0.00 0.00 0.00 2.66
5759 6301 6.294508 CGTTCCAAAATAGATGACCCAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
5760 6302 6.588719 TCCAAAATAGATGACCCAACTTTG 57.411 37.500 0.00 0.00 0.00 2.77
5761 6303 6.074648 TCCAAAATAGATGACCCAACTTTGT 58.925 36.000 0.00 0.00 0.00 2.83
5762 6304 7.235079 TCCAAAATAGATGACCCAACTTTGTA 58.765 34.615 0.00 0.00 0.00 2.41
5941 6487 2.760092 GGAAGGCATTAAACCATCAGCA 59.240 45.455 5.74 0.00 0.00 4.41
6025 6571 7.401080 CCTGTTTACTTTTCTTTGCAATGTTG 58.599 34.615 11.67 4.36 0.00 3.33
6044 6590 6.509418 TGTTGTCCCTTGATATAAACAAGC 57.491 37.500 13.91 5.47 42.03 4.01
6212 6758 3.970842 AGGACAGAGGGAGTAGTAACAG 58.029 50.000 0.00 0.00 0.00 3.16
6412 6958 7.847096 TGTGCAGATATGGTCTCTTTTAACTA 58.153 34.615 0.00 0.00 34.00 2.24
6509 7055 5.977129 CGTTGAAGTCTGCCAACTAATTTTT 59.023 36.000 13.33 0.00 40.17 1.94
6526 7072 2.438800 TTTTTCGGGGTTGGTGAGAA 57.561 45.000 0.00 0.00 0.00 2.87
6567 7114 9.070179 GTTACTTAGTGGAACATTTAAAGGGAA 57.930 33.333 4.70 0.00 44.52 3.97
6648 7195 9.986833 GAAGTGCTGTTTGTTAAATTTGAAAAT 57.013 25.926 0.00 0.00 0.00 1.82
6665 7212 4.688879 TGAAAATGTGTGCGAAGTAGTAGG 59.311 41.667 0.00 0.00 0.00 3.18
6750 7297 7.775397 ATACTTGCCGTAAATAAATGTACGT 57.225 32.000 10.85 0.00 41.13 3.57
6846 7393 3.660111 ACGAAAAGGCTGCCGTGC 61.660 61.111 13.96 2.99 33.69 5.34
7101 7653 0.464916 GACCAACTCCACACCGGTTT 60.465 55.000 2.97 0.00 35.57 3.27
7102 7654 0.033894 ACCAACTCCACACCGGTTTT 60.034 50.000 2.97 0.00 35.57 2.43
7108 7660 3.354467 ACTCCACACCGGTTTTTACAAA 58.646 40.909 2.97 0.00 35.57 2.83
7132 7684 3.068873 ACAACCAAACACAACAACACAGT 59.931 39.130 0.00 0.00 0.00 3.55
7169 7721 3.636231 CCAACACCGAGCCCCTCA 61.636 66.667 0.00 0.00 0.00 3.86
7171 7723 2.526873 AACACCGAGCCCCTCACT 60.527 61.111 0.00 0.00 0.00 3.41
7197 7759 1.138069 TCAGCCGACACTGAAGAACAA 59.862 47.619 0.97 0.00 43.59 2.83
7275 7837 0.700564 ATCTGGGCAGTGGTGAACAT 59.299 50.000 0.00 0.00 0.00 2.71
7299 7861 1.153086 GAGCGCATCATGGGACCTT 60.153 57.895 11.47 0.00 31.21 3.50
7340 7902 4.683832 CTCCCAATAGAGTAACAACCTCG 58.316 47.826 0.00 0.00 34.08 4.63
7341 7903 4.346730 TCCCAATAGAGTAACAACCTCGA 58.653 43.478 0.00 0.00 34.08 4.04
7342 7904 4.773674 TCCCAATAGAGTAACAACCTCGAA 59.226 41.667 0.00 0.00 34.08 3.71
7343 7905 5.105473 TCCCAATAGAGTAACAACCTCGAAG 60.105 44.000 0.00 0.00 34.08 3.79
7344 7906 5.105473 CCCAATAGAGTAACAACCTCGAAGA 60.105 44.000 0.00 0.00 34.08 2.87
7345 7907 5.805994 CCAATAGAGTAACAACCTCGAAGAC 59.194 44.000 0.00 0.00 34.08 3.01
7346 7908 3.555917 AGAGTAACAACCTCGAAGACG 57.444 47.619 0.00 0.00 41.26 4.18
7347 7909 2.883386 AGAGTAACAACCTCGAAGACGT 59.117 45.455 0.00 0.00 40.69 4.34
7348 7910 3.317430 AGAGTAACAACCTCGAAGACGTT 59.683 43.478 0.00 0.00 36.26 3.99
7351 7913 1.860078 CAACCTCGAAGACGTTGCC 59.140 57.895 0.00 0.00 43.84 4.52
7352 7914 0.878523 CAACCTCGAAGACGTTGCCA 60.879 55.000 0.00 0.00 43.84 4.92
7353 7915 0.179067 AACCTCGAAGACGTTGCCAA 60.179 50.000 0.00 0.00 34.68 4.52
7354 7916 0.034896 ACCTCGAAGACGTTGCCAAT 59.965 50.000 0.00 0.00 40.69 3.16
7355 7917 1.274167 ACCTCGAAGACGTTGCCAATA 59.726 47.619 0.00 0.00 40.69 1.90
7356 7918 1.927174 CCTCGAAGACGTTGCCAATAG 59.073 52.381 0.00 0.00 40.69 1.73
7357 7919 2.416836 CCTCGAAGACGTTGCCAATAGA 60.417 50.000 0.00 0.00 40.69 1.98
7358 7920 2.854777 CTCGAAGACGTTGCCAATAGAG 59.145 50.000 0.00 0.00 40.69 2.43
7359 7921 2.230508 TCGAAGACGTTGCCAATAGAGT 59.769 45.455 0.00 0.00 40.69 3.24
7360 7922 3.441222 TCGAAGACGTTGCCAATAGAGTA 59.559 43.478 0.00 0.00 40.69 2.59
7361 7923 4.082625 TCGAAGACGTTGCCAATAGAGTAA 60.083 41.667 0.00 0.00 40.69 2.24
7362 7924 4.031426 CGAAGACGTTGCCAATAGAGTAAC 59.969 45.833 0.00 0.00 34.56 2.50
7363 7925 4.530710 AGACGTTGCCAATAGAGTAACA 57.469 40.909 0.00 0.00 0.00 2.41
7364 7926 4.890088 AGACGTTGCCAATAGAGTAACAA 58.110 39.130 0.00 0.00 0.00 2.83
7365 7927 4.689345 AGACGTTGCCAATAGAGTAACAAC 59.311 41.667 0.00 0.00 35.28 3.32
7366 7928 3.749609 ACGTTGCCAATAGAGTAACAACC 59.250 43.478 0.00 0.00 35.20 3.77
7367 7929 4.000988 CGTTGCCAATAGAGTAACAACCT 58.999 43.478 0.00 0.00 35.20 3.50
7368 7930 4.092968 CGTTGCCAATAGAGTAACAACCTC 59.907 45.833 0.00 0.00 35.20 3.85
7448 8010 0.379669 GATACGAGGTCGCGAGGAAA 59.620 55.000 10.24 0.00 44.43 3.13
7587 8150 2.041265 AAGATCCCGGCCAGTCCT 59.959 61.111 2.24 0.00 0.00 3.85
7626 8189 1.662438 CCGCCACCACAACAACTTGT 61.662 55.000 0.00 0.00 41.61 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 6.212388 CCTTATGTTGGCACTATCTCTCCTAT 59.788 42.308 0.00 0.00 0.00 2.57
65 66 2.353307 GGGCGAAAAACCCTTATGTTGG 60.353 50.000 0.00 0.00 44.68 3.77
84 85 4.463879 CTCCAGCAGCGTGAGGGG 62.464 72.222 6.38 0.00 0.00 4.79
142 144 1.950472 CGTTTCAACGCCAATCACTC 58.050 50.000 0.00 0.00 46.06 3.51
154 156 2.354510 CTCTCACTTTGGCACGTTTCAA 59.645 45.455 0.00 0.00 0.00 2.69
160 163 0.671781 CCCTCTCTCACTTTGGCACG 60.672 60.000 0.00 0.00 0.00 5.34
180 183 1.601248 CCTCCATTCCTCCTTCCCTT 58.399 55.000 0.00 0.00 0.00 3.95
181 184 0.327964 CCCTCCATTCCTCCTTCCCT 60.328 60.000 0.00 0.00 0.00 4.20
182 185 1.356494 CCCCTCCATTCCTCCTTCCC 61.356 65.000 0.00 0.00 0.00 3.97
183 186 1.356494 CCCCCTCCATTCCTCCTTCC 61.356 65.000 0.00 0.00 0.00 3.46
184 187 0.327576 TCCCCCTCCATTCCTCCTTC 60.328 60.000 0.00 0.00 0.00 3.46
185 188 0.327964 CTCCCCCTCCATTCCTCCTT 60.328 60.000 0.00 0.00 0.00 3.36
186 189 1.238896 TCTCCCCCTCCATTCCTCCT 61.239 60.000 0.00 0.00 0.00 3.69
192 195 1.649271 GGCACATCTCCCCCTCCATT 61.649 60.000 0.00 0.00 0.00 3.16
194 197 2.692368 GGCACATCTCCCCCTCCA 60.692 66.667 0.00 0.00 0.00 3.86
261 282 2.995466 AACAGCAAATGGATGACACG 57.005 45.000 0.00 0.00 36.11 4.49
276 297 1.854664 GTGCATTGCCGCAAAACAG 59.145 52.632 10.42 2.14 45.14 3.16
405 426 5.072600 TGAAAATACCACTGTCCACCTAACT 59.927 40.000 0.00 0.00 0.00 2.24
433 454 0.178926 TCGGGACTTGAACCCTGGTA 60.179 55.000 0.00 0.00 44.72 3.25
491 513 1.374125 CGAAGTCACCGGTGCATCA 60.374 57.895 30.25 9.97 0.00 3.07
512 576 4.223700 AGCCGGCATATCATCTTGAGATTA 59.776 41.667 31.54 0.00 31.21 1.75
548 612 3.646637 ACACATCCTACCCTATAAGCACC 59.353 47.826 0.00 0.00 0.00 5.01
554 618 5.027460 ACACAACACACATCCTACCCTATA 58.973 41.667 0.00 0.00 0.00 1.31
560 624 6.201044 GCTCATATACACAACACACATCCTAC 59.799 42.308 0.00 0.00 0.00 3.18
565 629 4.635765 GGTGCTCATATACACAACACACAT 59.364 41.667 0.00 0.00 38.57 3.21
645 710 4.850680 TGTACAAGGCCTAAAAGTATGGG 58.149 43.478 5.16 0.00 0.00 4.00
646 711 6.183360 CCATTGTACAAGGCCTAAAAGTATGG 60.183 42.308 14.66 12.26 0.00 2.74
647 712 6.601613 TCCATTGTACAAGGCCTAAAAGTATG 59.398 38.462 14.66 0.00 0.00 2.39
650 715 4.993028 TCCATTGTACAAGGCCTAAAAGT 58.007 39.130 14.66 5.42 0.00 2.66
651 716 4.399303 CCTCCATTGTACAAGGCCTAAAAG 59.601 45.833 14.66 0.00 0.00 2.27
652 717 4.202631 ACCTCCATTGTACAAGGCCTAAAA 60.203 41.667 14.66 0.00 31.79 1.52
653 718 3.332485 ACCTCCATTGTACAAGGCCTAAA 59.668 43.478 14.66 0.00 31.79 1.85
654 719 2.916934 ACCTCCATTGTACAAGGCCTAA 59.083 45.455 14.66 0.00 31.79 2.69
655 720 2.238646 CACCTCCATTGTACAAGGCCTA 59.761 50.000 14.66 1.91 31.79 3.93
656 721 1.004745 CACCTCCATTGTACAAGGCCT 59.995 52.381 14.66 0.00 31.79 5.19
657 722 1.271926 ACACCTCCATTGTACAAGGCC 60.272 52.381 14.66 0.00 31.79 5.19
658 723 2.200373 ACACCTCCATTGTACAAGGC 57.800 50.000 14.66 0.00 31.79 4.35
659 724 5.556915 TCTAAACACCTCCATTGTACAAGG 58.443 41.667 14.65 13.92 34.94 3.61
660 725 6.464222 TCTCTAAACACCTCCATTGTACAAG 58.536 40.000 14.65 6.30 0.00 3.16
661 726 6.428083 TCTCTAAACACCTCCATTGTACAA 57.572 37.500 11.41 11.41 0.00 2.41
662 727 5.046591 CCTCTCTAAACACCTCCATTGTACA 60.047 44.000 0.00 0.00 0.00 2.90
663 728 5.046520 ACCTCTCTAAACACCTCCATTGTAC 60.047 44.000 0.00 0.00 0.00 2.90
664 729 5.046591 CACCTCTCTAAACACCTCCATTGTA 60.047 44.000 0.00 0.00 0.00 2.41
665 730 3.910627 ACCTCTCTAAACACCTCCATTGT 59.089 43.478 0.00 0.00 0.00 2.71
666 731 4.256920 CACCTCTCTAAACACCTCCATTG 58.743 47.826 0.00 0.00 0.00 2.82
667 732 3.307762 GCACCTCTCTAAACACCTCCATT 60.308 47.826 0.00 0.00 0.00 3.16
668 733 2.237392 GCACCTCTCTAAACACCTCCAT 59.763 50.000 0.00 0.00 0.00 3.41
669 734 1.623811 GCACCTCTCTAAACACCTCCA 59.376 52.381 0.00 0.00 0.00 3.86
670 735 1.903183 AGCACCTCTCTAAACACCTCC 59.097 52.381 0.00 0.00 0.00 4.30
671 736 3.686916 AAGCACCTCTCTAAACACCTC 57.313 47.619 0.00 0.00 0.00 3.85
672 737 3.515901 CCTAAGCACCTCTCTAAACACCT 59.484 47.826 0.00 0.00 0.00 4.00
673 738 3.514309 TCCTAAGCACCTCTCTAAACACC 59.486 47.826 0.00 0.00 0.00 4.16
674 739 4.803098 TCCTAAGCACCTCTCTAAACAC 57.197 45.455 0.00 0.00 0.00 3.32
675 740 5.818678 TTTCCTAAGCACCTCTCTAAACA 57.181 39.130 0.00 0.00 0.00 2.83
676 741 8.788325 TTATTTTCCTAAGCACCTCTCTAAAC 57.212 34.615 0.00 0.00 0.00 2.01
677 742 9.975218 ATTTATTTTCCTAAGCACCTCTCTAAA 57.025 29.630 0.00 0.00 0.00 1.85
678 743 9.614792 GATTTATTTTCCTAAGCACCTCTCTAA 57.385 33.333 0.00 0.00 0.00 2.10
679 744 7.926555 CGATTTATTTTCCTAAGCACCTCTCTA 59.073 37.037 0.00 0.00 0.00 2.43
680 745 6.763610 CGATTTATTTTCCTAAGCACCTCTCT 59.236 38.462 0.00 0.00 0.00 3.10
681 746 6.761714 TCGATTTATTTTCCTAAGCACCTCTC 59.238 38.462 0.00 0.00 0.00 3.20
682 747 6.650120 TCGATTTATTTTCCTAAGCACCTCT 58.350 36.000 0.00 0.00 0.00 3.69
683 748 6.920569 TCGATTTATTTTCCTAAGCACCTC 57.079 37.500 0.00 0.00 0.00 3.85
684 749 7.881775 ATTCGATTTATTTTCCTAAGCACCT 57.118 32.000 0.00 0.00 0.00 4.00
685 750 8.926715 AAATTCGATTTATTTTCCTAAGCACC 57.073 30.769 0.00 0.00 0.00 5.01
693 758 9.958285 GCTTCAGAAAAATTCGATTTATTTTCC 57.042 29.630 15.71 3.10 40.77 3.13
696 761 8.925700 GGTGCTTCAGAAAAATTCGATTTATTT 58.074 29.630 0.00 0.00 34.02 1.40
697 762 7.273381 CGGTGCTTCAGAAAAATTCGATTTATT 59.727 33.333 0.00 0.00 34.02 1.40
698 763 6.747280 CGGTGCTTCAGAAAAATTCGATTTAT 59.253 34.615 0.00 0.00 34.02 1.40
699 764 6.083630 CGGTGCTTCAGAAAAATTCGATTTA 58.916 36.000 0.00 0.00 34.02 1.40
700 765 4.917415 CGGTGCTTCAGAAAAATTCGATTT 59.083 37.500 0.00 0.00 34.02 2.17
701 766 4.475944 CGGTGCTTCAGAAAAATTCGATT 58.524 39.130 0.00 0.00 34.02 3.34
702 767 3.119849 CCGGTGCTTCAGAAAAATTCGAT 60.120 43.478 0.00 0.00 34.02 3.59
703 768 2.225491 CCGGTGCTTCAGAAAAATTCGA 59.775 45.455 0.00 0.00 34.02 3.71
704 769 2.031157 ACCGGTGCTTCAGAAAAATTCG 60.031 45.455 6.12 0.00 34.02 3.34
705 770 3.643159 ACCGGTGCTTCAGAAAAATTC 57.357 42.857 6.12 0.00 0.00 2.17
706 771 3.254903 GGTACCGGTGCTTCAGAAAAATT 59.745 43.478 22.50 0.00 0.00 1.82
707 772 2.817844 GGTACCGGTGCTTCAGAAAAAT 59.182 45.455 22.50 0.00 0.00 1.82
708 773 2.158726 AGGTACCGGTGCTTCAGAAAAA 60.159 45.455 22.50 0.00 0.00 1.94
709 774 1.418637 AGGTACCGGTGCTTCAGAAAA 59.581 47.619 22.50 0.00 0.00 2.29
710 775 1.053424 AGGTACCGGTGCTTCAGAAA 58.947 50.000 22.50 0.00 0.00 2.52
711 776 1.927487 TAGGTACCGGTGCTTCAGAA 58.073 50.000 22.50 0.00 0.00 3.02
712 777 2.154567 ATAGGTACCGGTGCTTCAGA 57.845 50.000 22.50 0.00 0.00 3.27
713 778 2.981859 AATAGGTACCGGTGCTTCAG 57.018 50.000 22.50 0.00 0.00 3.02
714 779 2.835764 AGAAATAGGTACCGGTGCTTCA 59.164 45.455 22.50 8.15 0.00 3.02
715 780 3.538634 AGAAATAGGTACCGGTGCTTC 57.461 47.619 22.50 16.89 0.00 3.86
716 781 3.770933 TGTAGAAATAGGTACCGGTGCTT 59.229 43.478 22.50 17.73 0.00 3.91
717 782 3.368248 TGTAGAAATAGGTACCGGTGCT 58.632 45.455 22.50 10.83 0.00 4.40
718 783 3.382546 TCTGTAGAAATAGGTACCGGTGC 59.617 47.826 19.93 17.43 0.00 5.01
719 784 5.359009 TCTTCTGTAGAAATAGGTACCGGTG 59.641 44.000 19.93 0.00 33.07 4.94
720 785 5.513233 TCTTCTGTAGAAATAGGTACCGGT 58.487 41.667 13.98 13.98 33.07 5.28
721 786 5.826737 TCTCTTCTGTAGAAATAGGTACCGG 59.173 44.000 6.18 0.00 33.07 5.28
722 787 6.511444 CGTCTCTTCTGTAGAAATAGGTACCG 60.511 46.154 6.18 0.00 33.07 4.02
723 788 6.727215 CGTCTCTTCTGTAGAAATAGGTACC 58.273 44.000 2.73 2.73 33.07 3.34
724 789 6.038492 AGCGTCTCTTCTGTAGAAATAGGTAC 59.962 42.308 0.00 0.00 33.07 3.34
725 790 6.120905 AGCGTCTCTTCTGTAGAAATAGGTA 58.879 40.000 0.00 0.00 33.07 3.08
726 791 4.951094 AGCGTCTCTTCTGTAGAAATAGGT 59.049 41.667 0.00 0.00 33.07 3.08
727 792 5.508200 AGCGTCTCTTCTGTAGAAATAGG 57.492 43.478 0.00 0.00 33.07 2.57
728 793 7.699566 ACTAAGCGTCTCTTCTGTAGAAATAG 58.300 38.462 0.00 0.00 36.25 1.73
729 794 7.627298 ACTAAGCGTCTCTTCTGTAGAAATA 57.373 36.000 0.00 0.00 36.25 1.40
730 795 6.518208 ACTAAGCGTCTCTTCTGTAGAAAT 57.482 37.500 0.00 0.00 36.25 2.17
731 796 5.961396 ACTAAGCGTCTCTTCTGTAGAAA 57.039 39.130 0.00 0.00 36.25 2.52
732 797 5.961396 AACTAAGCGTCTCTTCTGTAGAA 57.039 39.130 0.00 0.00 36.25 2.10
733 798 7.074507 CTTAACTAAGCGTCTCTTCTGTAGA 57.925 40.000 0.00 0.00 36.25 2.59
748 813 7.024340 TGTACAGGATAGACGCTTAACTAAG 57.976 40.000 0.00 0.00 36.40 2.18
749 814 7.395190 TTGTACAGGATAGACGCTTAACTAA 57.605 36.000 0.00 0.00 0.00 2.24
750 815 7.395190 TTTGTACAGGATAGACGCTTAACTA 57.605 36.000 0.00 0.00 0.00 2.24
751 816 5.909621 TTGTACAGGATAGACGCTTAACT 57.090 39.130 0.00 0.00 0.00 2.24
752 817 8.638685 TTATTTGTACAGGATAGACGCTTAAC 57.361 34.615 0.00 0.00 0.00 2.01
753 818 7.437267 GCTTATTTGTACAGGATAGACGCTTAA 59.563 37.037 0.00 0.00 0.00 1.85
754 819 6.921857 GCTTATTTGTACAGGATAGACGCTTA 59.078 38.462 0.00 0.00 0.00 3.09
755 820 5.753921 GCTTATTTGTACAGGATAGACGCTT 59.246 40.000 0.00 0.00 0.00 4.68
756 821 5.163447 TGCTTATTTGTACAGGATAGACGCT 60.163 40.000 0.00 0.00 0.00 5.07
757 822 5.047847 TGCTTATTTGTACAGGATAGACGC 58.952 41.667 0.00 4.64 0.00 5.19
758 823 5.462398 GGTGCTTATTTGTACAGGATAGACG 59.538 44.000 0.00 0.00 0.00 4.18
759 824 5.462398 CGGTGCTTATTTGTACAGGATAGAC 59.538 44.000 0.00 0.00 0.00 2.59
760 825 5.452776 CCGGTGCTTATTTGTACAGGATAGA 60.453 44.000 0.00 0.00 39.37 1.98
761 826 4.750098 CCGGTGCTTATTTGTACAGGATAG 59.250 45.833 0.00 0.00 39.37 2.08
762 827 4.162698 ACCGGTGCTTATTTGTACAGGATA 59.837 41.667 6.12 0.00 39.37 2.59
763 828 3.054655 ACCGGTGCTTATTTGTACAGGAT 60.055 43.478 6.12 0.00 39.37 3.24
764 829 2.303600 ACCGGTGCTTATTTGTACAGGA 59.696 45.455 6.12 0.00 39.37 3.86
765 830 2.418628 CACCGGTGCTTATTTGTACAGG 59.581 50.000 24.02 0.00 41.71 4.00
766 831 3.740044 CACCGGTGCTTATTTGTACAG 57.260 47.619 24.02 0.00 0.00 2.74
779 844 2.621526 AGGTTTTTCTTAAGCACCGGTG 59.378 45.455 30.66 30.66 32.32 4.94
780 845 2.621526 CAGGTTTTTCTTAAGCACCGGT 59.378 45.455 0.00 0.00 32.32 5.28
781 846 2.030274 CCAGGTTTTTCTTAAGCACCGG 60.030 50.000 0.00 0.00 32.32 5.28
782 847 2.621526 ACCAGGTTTTTCTTAAGCACCG 59.378 45.455 0.00 0.00 32.32 4.94
783 848 4.665833 AACCAGGTTTTTCTTAAGCACC 57.334 40.909 0.00 1.55 0.00 5.01
784 849 5.902681 AGAAACCAGGTTTTTCTTAAGCAC 58.097 37.500 19.05 2.25 39.77 4.40
785 850 5.891551 AGAGAAACCAGGTTTTTCTTAAGCA 59.108 36.000 25.85 0.00 41.87 3.91
786 851 6.392625 AGAGAAACCAGGTTTTTCTTAAGC 57.607 37.500 25.85 9.51 41.87 3.09
787 852 8.076781 GCTTAGAGAAACCAGGTTTTTCTTAAG 58.923 37.037 32.61 29.01 41.87 1.85
788 853 7.558444 TGCTTAGAGAAACCAGGTTTTTCTTAA 59.442 33.333 32.61 23.79 41.87 1.85
789 854 7.012989 GTGCTTAGAGAAACCAGGTTTTTCTTA 59.987 37.037 32.61 25.40 41.87 2.10
790 855 5.891551 TGCTTAGAGAAACCAGGTTTTTCTT 59.108 36.000 32.61 20.81 41.87 2.52
791 856 5.299531 GTGCTTAGAGAAACCAGGTTTTTCT 59.700 40.000 31.04 31.04 44.92 2.52
792 857 5.507482 GGTGCTTAGAGAAACCAGGTTTTTC 60.507 44.000 22.74 22.74 37.05 2.29
793 858 4.341235 GGTGCTTAGAGAAACCAGGTTTTT 59.659 41.667 19.05 13.53 35.77 1.94
794 859 3.889538 GGTGCTTAGAGAAACCAGGTTTT 59.110 43.478 19.05 8.97 35.77 2.43
795 860 3.487372 GGTGCTTAGAGAAACCAGGTTT 58.513 45.455 18.10 18.10 38.54 3.27
796 861 2.224793 GGGTGCTTAGAGAAACCAGGTT 60.225 50.000 0.00 0.00 34.18 3.50
797 862 1.351350 GGGTGCTTAGAGAAACCAGGT 59.649 52.381 0.00 0.00 34.18 4.00
798 863 1.340114 GGGGTGCTTAGAGAAACCAGG 60.340 57.143 0.00 0.00 34.18 4.45
799 864 1.630878 AGGGGTGCTTAGAGAAACCAG 59.369 52.381 0.00 0.00 34.18 4.00
800 865 1.742308 AGGGGTGCTTAGAGAAACCA 58.258 50.000 0.00 0.00 34.18 3.67
801 866 3.994931 TTAGGGGTGCTTAGAGAAACC 57.005 47.619 0.00 0.00 0.00 3.27
802 867 4.648651 TGTTTAGGGGTGCTTAGAGAAAC 58.351 43.478 0.00 0.00 0.00 2.78
803 868 4.986054 TGTTTAGGGGTGCTTAGAGAAA 57.014 40.909 0.00 0.00 0.00 2.52
804 869 4.783227 AGATGTTTAGGGGTGCTTAGAGAA 59.217 41.667 0.00 0.00 0.00 2.87
805 870 4.362677 AGATGTTTAGGGGTGCTTAGAGA 58.637 43.478 0.00 0.00 0.00 3.10
806 871 4.443598 GGAGATGTTTAGGGGTGCTTAGAG 60.444 50.000 0.00 0.00 0.00 2.43
807 872 3.454812 GGAGATGTTTAGGGGTGCTTAGA 59.545 47.826 0.00 0.00 0.00 2.10
808 873 3.433740 GGGAGATGTTTAGGGGTGCTTAG 60.434 52.174 0.00 0.00 0.00 2.18
809 874 2.508300 GGGAGATGTTTAGGGGTGCTTA 59.492 50.000 0.00 0.00 0.00 3.09
810 875 1.285078 GGGAGATGTTTAGGGGTGCTT 59.715 52.381 0.00 0.00 0.00 3.91
811 876 0.919710 GGGAGATGTTTAGGGGTGCT 59.080 55.000 0.00 0.00 0.00 4.40
812 877 0.623723 TGGGAGATGTTTAGGGGTGC 59.376 55.000 0.00 0.00 0.00 5.01
813 878 3.290710 CAATGGGAGATGTTTAGGGGTG 58.709 50.000 0.00 0.00 0.00 4.61
814 879 2.926329 ACAATGGGAGATGTTTAGGGGT 59.074 45.455 0.00 0.00 0.00 4.95
815 880 3.669939 ACAATGGGAGATGTTTAGGGG 57.330 47.619 0.00 0.00 0.00 4.79
816 881 5.110814 TGTACAATGGGAGATGTTTAGGG 57.889 43.478 0.00 0.00 0.00 3.53
817 882 6.316390 GTCTTGTACAATGGGAGATGTTTAGG 59.684 42.308 9.13 0.00 0.00 2.69
818 883 6.316390 GGTCTTGTACAATGGGAGATGTTTAG 59.684 42.308 9.13 0.00 0.00 1.85
819 884 6.012858 AGGTCTTGTACAATGGGAGATGTTTA 60.013 38.462 9.13 0.00 0.00 2.01
820 885 5.010282 GGTCTTGTACAATGGGAGATGTTT 58.990 41.667 9.13 0.00 0.00 2.83
821 886 4.289672 AGGTCTTGTACAATGGGAGATGTT 59.710 41.667 9.13 0.00 0.00 2.71
822 887 3.846588 AGGTCTTGTACAATGGGAGATGT 59.153 43.478 9.13 0.00 0.00 3.06
823 888 4.494091 AGGTCTTGTACAATGGGAGATG 57.506 45.455 9.13 0.00 0.00 2.90
824 889 5.964477 TCTAAGGTCTTGTACAATGGGAGAT 59.036 40.000 9.13 0.00 0.00 2.75
825 890 5.187186 GTCTAAGGTCTTGTACAATGGGAGA 59.813 44.000 9.13 0.00 0.00 3.71
826 891 5.420409 GTCTAAGGTCTTGTACAATGGGAG 58.580 45.833 9.13 0.00 0.00 4.30
827 892 4.081862 CGTCTAAGGTCTTGTACAATGGGA 60.082 45.833 9.13 0.00 0.00 4.37
828 893 4.081862 TCGTCTAAGGTCTTGTACAATGGG 60.082 45.833 9.13 0.00 0.00 4.00
829 894 5.068234 TCGTCTAAGGTCTTGTACAATGG 57.932 43.478 9.13 0.00 0.00 3.16
830 895 7.117812 ACAAATCGTCTAAGGTCTTGTACAATG 59.882 37.037 9.13 3.87 0.00 2.82
831 896 7.159372 ACAAATCGTCTAAGGTCTTGTACAAT 58.841 34.615 9.13 0.00 0.00 2.71
832 897 6.518493 ACAAATCGTCTAAGGTCTTGTACAA 58.482 36.000 8.28 8.28 0.00 2.41
833 898 6.092955 ACAAATCGTCTAAGGTCTTGTACA 57.907 37.500 0.00 0.00 0.00 2.90
834 899 5.575995 GGACAAATCGTCTAAGGTCTTGTAC 59.424 44.000 0.00 0.00 44.70 2.90
835 900 5.620654 CGGACAAATCGTCTAAGGTCTTGTA 60.621 44.000 0.00 0.00 44.70 2.41
836 901 4.566987 GGACAAATCGTCTAAGGTCTTGT 58.433 43.478 0.00 0.00 44.70 3.16
837 902 3.612860 CGGACAAATCGTCTAAGGTCTTG 59.387 47.826 0.00 0.00 44.70 3.02
838 903 3.508793 TCGGACAAATCGTCTAAGGTCTT 59.491 43.478 0.00 0.00 44.70 3.01
839 904 3.087031 TCGGACAAATCGTCTAAGGTCT 58.913 45.455 0.00 0.00 44.70 3.85
840 905 3.177487 GTCGGACAAATCGTCTAAGGTC 58.823 50.000 2.62 0.00 44.70 3.85
841 906 2.559668 TGTCGGACAAATCGTCTAAGGT 59.440 45.455 8.68 0.00 44.70 3.50
842 907 3.226346 TGTCGGACAAATCGTCTAAGG 57.774 47.619 8.68 0.00 44.70 2.69
843 908 5.779806 AAATGTCGGACAAATCGTCTAAG 57.220 39.130 15.72 0.00 44.70 2.18
864 929 4.196193 AGTCGGATGTGTCTCAACAAAAA 58.804 39.130 0.00 0.00 37.08 1.94
869 934 2.069273 CCAAGTCGGATGTGTCTCAAC 58.931 52.381 0.00 0.00 36.56 3.18
872 937 0.608640 ACCCAAGTCGGATGTGTCTC 59.391 55.000 0.00 0.00 36.56 3.36
893 958 1.321743 CAAACTCGATACGTGCTGCTC 59.678 52.381 0.00 0.00 0.00 4.26
894 959 1.350193 CAAACTCGATACGTGCTGCT 58.650 50.000 0.00 0.00 0.00 4.24
895 960 0.247301 GCAAACTCGATACGTGCTGC 60.247 55.000 0.00 0.00 32.43 5.25
896 961 0.370273 GGCAAACTCGATACGTGCTG 59.630 55.000 0.00 0.00 35.53 4.41
897 962 0.739813 GGGCAAACTCGATACGTGCT 60.740 55.000 0.00 0.00 35.53 4.40
898 963 1.702491 GGGGCAAACTCGATACGTGC 61.702 60.000 0.00 0.00 34.42 5.34
899 964 1.418342 CGGGGCAAACTCGATACGTG 61.418 60.000 0.00 0.00 0.00 4.49
1268 1340 0.613853 TCTTGAAGGATCGGGGTCGT 60.614 55.000 0.00 0.00 37.69 4.34
1305 1377 8.882736 GGATCATCAAAACCAAATTATCCAAAC 58.117 33.333 0.00 0.00 32.42 2.93
1472 1544 2.611292 GGCAAGAGTACACATCATCAGC 59.389 50.000 0.00 0.00 0.00 4.26
1768 1843 5.049167 TCAAAACACATTTTCATGCTGGAC 58.951 37.500 0.00 0.00 35.79 4.02
1957 2033 7.755373 GGCAAAAGACATTTCTGTAGATTTACC 59.245 37.037 0.00 0.00 35.14 2.85
2107 2183 4.402829 TGCAAAGGCCACATTACTAAAGA 58.597 39.130 5.01 0.00 40.13 2.52
2108 2184 4.782019 TGCAAAGGCCACATTACTAAAG 57.218 40.909 5.01 0.00 40.13 1.85
2109 2185 5.480073 AGAATGCAAAGGCCACATTACTAAA 59.520 36.000 5.01 0.00 40.13 1.85
2110 2186 5.016173 AGAATGCAAAGGCCACATTACTAA 58.984 37.500 5.01 0.00 40.13 2.24
2111 2187 4.599041 AGAATGCAAAGGCCACATTACTA 58.401 39.130 5.01 0.00 40.13 1.82
2112 2188 3.434309 AGAATGCAAAGGCCACATTACT 58.566 40.909 5.01 6.30 40.13 2.24
2113 2189 3.874392 AGAATGCAAAGGCCACATTAC 57.126 42.857 5.01 4.28 40.13 1.89
2114 2190 4.888326 AAAGAATGCAAAGGCCACATTA 57.112 36.364 5.01 0.00 40.13 1.90
2115 2191 3.775261 AAAGAATGCAAAGGCCACATT 57.225 38.095 5.01 9.33 40.13 2.71
2116 2192 3.325716 AGAAAAGAATGCAAAGGCCACAT 59.674 39.130 5.01 0.00 40.13 3.21
2117 2193 2.699846 AGAAAAGAATGCAAAGGCCACA 59.300 40.909 5.01 0.00 40.13 4.17
2118 2194 3.006217 AGAGAAAAGAATGCAAAGGCCAC 59.994 43.478 5.01 0.00 40.13 5.01
2119 2195 3.233507 AGAGAAAAGAATGCAAAGGCCA 58.766 40.909 5.01 0.00 40.13 5.36
2120 2196 3.509184 AGAGAGAAAAGAATGCAAAGGCC 59.491 43.478 0.00 0.00 40.13 5.19
2121 2197 4.458642 AGAGAGAGAAAAGAATGCAAAGGC 59.541 41.667 0.00 0.00 41.68 4.35
2122 2198 6.572167 AAGAGAGAGAAAAGAATGCAAAGG 57.428 37.500 0.00 0.00 0.00 3.11
2123 2199 8.868635 AAAAAGAGAGAGAAAAGAATGCAAAG 57.131 30.769 0.00 0.00 0.00 2.77
2147 2223 5.649557 CATCCACAGTGTGAAGAACAAAAA 58.350 37.500 24.99 0.00 41.57 1.94
2509 2647 5.349817 CCAGAGTGTAAGTTTAGCATGACAG 59.650 44.000 0.00 0.00 0.00 3.51
2554 2692 0.868406 GATTGCGTACCTGCATAGCC 59.132 55.000 0.00 0.00 45.78 3.93
2695 2833 2.237392 AGCTATCCCTGGTCAGAAACAC 59.763 50.000 0.00 0.00 0.00 3.32
2702 2840 0.264657 TAGGCAGCTATCCCTGGTCA 59.735 55.000 9.38 0.00 33.44 4.02
2773 2911 1.370609 TGAAACGAACGGAAGCAACA 58.629 45.000 0.00 0.00 0.00 3.33
2877 3015 4.263506 ACCAAGAGAAATCCACCTAACAGG 60.264 45.833 0.00 0.00 42.49 4.00
2878 3016 4.697352 CACCAAGAGAAATCCACCTAACAG 59.303 45.833 0.00 0.00 0.00 3.16
2879 3017 4.506625 CCACCAAGAGAAATCCACCTAACA 60.507 45.833 0.00 0.00 0.00 2.41
2880 3018 4.010349 CCACCAAGAGAAATCCACCTAAC 58.990 47.826 0.00 0.00 0.00 2.34
2881 3019 3.655777 ACCACCAAGAGAAATCCACCTAA 59.344 43.478 0.00 0.00 0.00 2.69
2882 3020 3.256704 ACCACCAAGAGAAATCCACCTA 58.743 45.455 0.00 0.00 0.00 3.08
2883 3021 2.065799 ACCACCAAGAGAAATCCACCT 58.934 47.619 0.00 0.00 0.00 4.00
2884 3022 2.558359 CAACCACCAAGAGAAATCCACC 59.442 50.000 0.00 0.00 0.00 4.61
3299 3438 0.235665 CACACAACTGACACGATGCC 59.764 55.000 0.00 0.00 0.00 4.40
3336 3476 3.060540 GTCACAATGTATGTATGACGGCG 60.061 47.826 4.80 4.80 41.46 6.46
3392 3532 5.160607 ACAGTTGCTGCAGGTACTATTAA 57.839 39.130 17.12 0.00 32.60 1.40
3495 4013 6.935208 CCTATACTTTTGGCAGGTAAGGATAC 59.065 42.308 9.78 0.00 0.00 2.24
3659 4177 4.872691 ACAATATGGCAGTTTCGAGAAGAG 59.127 41.667 0.00 0.00 0.00 2.85
4159 4686 3.721087 AAGACCGAGGACCAATCAAAT 57.279 42.857 0.00 0.00 0.00 2.32
4396 4923 2.118228 TGCGTTGTGTCAAATGCTTC 57.882 45.000 10.98 0.00 41.67 3.86
4600 5127 9.571810 CATCTCTTGACAGATTATATAGACAGC 57.428 37.037 0.00 0.00 30.07 4.40
5027 5558 6.183360 ACGCAAACTAAAAAGGACCAACATAA 60.183 34.615 0.00 0.00 0.00 1.90
5083 5614 6.865205 AGCAATCTTTCAGTCTTTAAACATGC 59.135 34.615 0.00 0.00 0.00 4.06
5150 5681 3.307059 GGTTATGTGCAACTCAGGAGACT 60.307 47.826 2.79 0.00 38.99 3.24
5302 5840 1.549243 TATTCAGGGCAGGCGTGTGA 61.549 55.000 15.60 7.16 0.00 3.58
5727 6269 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
5729 6271 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
5730 6272 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
5731 6273 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
5733 6275 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
5734 6276 4.700213 AGTTGGGTCATCTATTTTGGAACG 59.300 41.667 0.00 0.00 0.00 3.95
5735 6277 6.590234 AAGTTGGGTCATCTATTTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
5738 6280 6.345096 ACAAAGTTGGGTCATCTATTTTGG 57.655 37.500 0.00 0.00 0.00 3.28
5739 6281 7.362920 CCCTACAAAGTTGGGTCATCTATTTTG 60.363 40.741 8.27 0.00 42.22 2.44
5741 6283 6.187682 CCCTACAAAGTTGGGTCATCTATTT 58.812 40.000 8.27 0.00 42.22 1.40
5742 6284 5.755849 CCCTACAAAGTTGGGTCATCTATT 58.244 41.667 8.27 0.00 42.22 1.73
5743 6285 5.373812 CCCTACAAAGTTGGGTCATCTAT 57.626 43.478 8.27 0.00 42.22 1.98
5752 6294 5.812286 AGTATTACCACCCTACAAAGTTGG 58.188 41.667 0.00 0.00 32.50 3.77
5753 6295 6.349033 GCAAGTATTACCACCCTACAAAGTTG 60.349 42.308 0.00 0.00 0.00 3.16
5754 6296 5.708697 GCAAGTATTACCACCCTACAAAGTT 59.291 40.000 0.00 0.00 0.00 2.66
5755 6297 5.221966 TGCAAGTATTACCACCCTACAAAGT 60.222 40.000 0.00 0.00 0.00 2.66
5756 6298 5.250200 TGCAAGTATTACCACCCTACAAAG 58.750 41.667 0.00 0.00 0.00 2.77
5757 6299 5.244189 TGCAAGTATTACCACCCTACAAA 57.756 39.130 0.00 0.00 0.00 2.83
5758 6300 4.839121 CTGCAAGTATTACCACCCTACAA 58.161 43.478 0.00 0.00 0.00 2.41
5759 6301 4.481368 CTGCAAGTATTACCACCCTACA 57.519 45.455 0.00 0.00 0.00 2.74
5941 6487 4.125703 TGCCAATTGTTTCAAATCGCTTT 58.874 34.783 4.43 0.00 0.00 3.51
5986 6532 3.418684 AAACAGGCTACCGTCAAATCT 57.581 42.857 0.00 0.00 0.00 2.40
5989 6535 3.756933 AGTAAACAGGCTACCGTCAAA 57.243 42.857 0.00 0.00 0.00 2.69
6044 6590 3.058160 CCACTCCAAAGCCCAGCG 61.058 66.667 0.00 0.00 0.00 5.18
6088 6634 6.909550 TGTTTTATAAAGGGACAGCATTGT 57.090 33.333 0.00 0.00 41.18 2.71
6212 6758 7.114529 GCAGCTTTGTATAAAATGCATGATCTC 59.885 37.037 14.19 0.00 37.96 2.75
6412 6958 7.735326 ATACTTATTTCAGTACAGGTCCAGT 57.265 36.000 0.00 0.00 31.92 4.00
6453 6999 1.388837 AAAACAGGGCACGGGTTGTC 61.389 55.000 0.00 0.00 0.00 3.18
6509 7055 2.235016 CATTTCTCACCAACCCCGAAA 58.765 47.619 0.00 0.00 0.00 3.46
6648 7195 3.415212 AGTACCTACTACTTCGCACACA 58.585 45.455 0.00 0.00 30.80 3.72
6665 7212 7.768807 ACATCTGGTCTAGATTCCATAGTAC 57.231 40.000 2.70 0.00 43.68 2.73
6746 7293 4.659111 TCAAGGAAACTGAAGTGACGTA 57.341 40.909 0.00 0.00 42.68 3.57
6750 7297 4.229304 TGGTTCAAGGAAACTGAAGTGA 57.771 40.909 0.00 0.00 42.68 3.41
6846 7393 1.824852 GGTAAATCAGCCAAAGTGGGG 59.175 52.381 0.00 0.00 38.19 4.96
7046 7597 3.845178 CAGCGAGTGGTAGATGTTGTTA 58.155 45.455 0.00 0.00 0.00 2.41
7053 7604 0.179134 GTTCGCAGCGAGTGGTAGAT 60.179 55.000 18.62 0.00 37.14 1.98
7101 7653 6.513180 TGTTGTGTTTGGTTGTCTTTGTAAA 58.487 32.000 0.00 0.00 0.00 2.01
7102 7654 6.085555 TGTTGTGTTTGGTTGTCTTTGTAA 57.914 33.333 0.00 0.00 0.00 2.41
7108 7660 3.319405 TGTGTTGTTGTGTTTGGTTGTCT 59.681 39.130 0.00 0.00 0.00 3.41
7132 7684 3.075884 GGGTAGGCATTTTGTGTCGTAA 58.924 45.455 0.00 0.00 37.56 3.18
7197 7759 1.140312 TCCAAGGAAGCTGGAGTTGT 58.860 50.000 0.00 0.00 38.07 3.32
7241 7803 0.826715 CAGATCTTTCTCCTCCGGCA 59.173 55.000 0.00 0.00 0.00 5.69
7259 7821 1.302431 CGATGTTCACCACTGCCCA 60.302 57.895 0.00 0.00 0.00 5.36
7275 7837 2.418777 CATGATGCGCTCCTCCGA 59.581 61.111 9.73 0.00 0.00 4.55
7299 7861 0.321919 GCATTGTGCTGGGAGACTCA 60.322 55.000 4.53 0.00 40.96 3.41
7325 7887 4.067896 ACGTCTTCGAGGTTGTTACTCTA 58.932 43.478 0.00 0.00 40.62 2.43
7340 7902 4.927425 TGTTACTCTATTGGCAACGTCTTC 59.073 41.667 0.00 0.00 42.51 2.87
7341 7903 4.890088 TGTTACTCTATTGGCAACGTCTT 58.110 39.130 0.00 0.00 42.51 3.01
7342 7904 4.530710 TGTTACTCTATTGGCAACGTCT 57.469 40.909 0.00 0.00 42.51 4.18
7343 7905 4.142966 GGTTGTTACTCTATTGGCAACGTC 60.143 45.833 0.00 0.00 37.61 4.34
7344 7906 3.749609 GGTTGTTACTCTATTGGCAACGT 59.250 43.478 0.00 0.15 37.61 3.99
7345 7907 4.000988 AGGTTGTTACTCTATTGGCAACG 58.999 43.478 0.00 0.00 37.61 4.10
7346 7908 5.001232 TGAGGTTGTTACTCTATTGGCAAC 58.999 41.667 0.00 0.00 35.98 4.17
7347 7909 5.235850 TGAGGTTGTTACTCTATTGGCAA 57.764 39.130 0.68 0.68 35.98 4.52
7348 7910 4.901197 TGAGGTTGTTACTCTATTGGCA 57.099 40.909 0.00 0.00 35.98 4.92
7349 7911 5.938125 TCTTTGAGGTTGTTACTCTATTGGC 59.062 40.000 0.00 0.00 35.98 4.52
7350 7912 6.090898 CGTCTTTGAGGTTGTTACTCTATTGG 59.909 42.308 0.00 0.00 35.98 3.16
7351 7913 6.645415 ACGTCTTTGAGGTTGTTACTCTATTG 59.355 38.462 0.00 0.00 35.98 1.90
7352 7914 6.756221 ACGTCTTTGAGGTTGTTACTCTATT 58.244 36.000 0.00 0.00 35.98 1.73
7353 7915 6.342338 ACGTCTTTGAGGTTGTTACTCTAT 57.658 37.500 0.00 0.00 35.98 1.98
7354 7916 5.779529 ACGTCTTTGAGGTTGTTACTCTA 57.220 39.130 0.00 0.00 35.98 2.43
7355 7917 4.667519 ACGTCTTTGAGGTTGTTACTCT 57.332 40.909 0.00 0.00 35.98 3.24
7356 7918 5.079397 CAACGTCTTTGAGGTTGTTACTC 57.921 43.478 18.93 0.00 46.55 2.59
7363 7925 1.981256 ATGGCAACGTCTTTGAGGTT 58.019 45.000 0.00 0.57 40.55 3.50
7364 7926 3.725754 ATGGCAACGTCTTTGAGGT 57.274 47.368 0.00 0.00 37.39 3.85
7419 7981 0.179171 ACCTCGTATCGACAACTGCG 60.179 55.000 0.00 0.00 0.00 5.18
7420 7982 1.546834 GACCTCGTATCGACAACTGC 58.453 55.000 0.00 0.00 0.00 4.40
7427 7989 2.242572 CCTCGCGACCTCGTATCGA 61.243 63.158 3.71 0.00 42.25 3.59
7448 8010 2.452813 CGCCGAGTGCAACGCTATT 61.453 57.895 8.71 0.00 45.86 1.73
7493 8055 1.965930 GGCGTTGATGACACCTGCA 60.966 57.895 0.00 0.00 0.00 4.41
7501 8063 4.444838 CCGGACCGGCGTTGATGA 62.445 66.667 22.37 0.00 41.17 2.92
7530 8092 3.261981 ACGCTACGGATGAAAATCCTT 57.738 42.857 3.40 0.00 38.57 3.36
7587 8150 1.144716 GGTGCGAGGCATCTGATCA 59.855 57.895 0.00 0.00 41.91 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.