Multiple sequence alignment - TraesCS1A01G119300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G119300 chr1A 100.000 2895 0 0 618 3512 130148828 130151722 0.000000e+00 5347.0
1 TraesCS1A01G119300 chr1A 100.000 163 0 0 1 163 130148211 130148373 5.700000e-78 302.0
2 TraesCS1A01G119300 chr1D 94.323 2149 75 13 820 2960 118510298 118512407 0.000000e+00 3249.0
3 TraesCS1A01G119300 chr1D 91.026 312 27 1 3148 3459 118512466 118512776 1.510000e-113 420.0
4 TraesCS1A01G119300 chr1B 95.838 1970 52 13 822 2775 180405644 180407599 0.000000e+00 3157.0
5 TraesCS1A01G119300 chr1B 96.933 163 5 0 1 163 17524091 17524253 1.240000e-69 274.0
6 TraesCS1A01G119300 chr1B 89.865 148 8 4 2775 2915 180411602 180411749 2.150000e-42 183.0
7 TraesCS1A01G119300 chr1B 85.207 169 18 5 2970 3132 527287162 527287329 2.170000e-37 167.0
8 TraesCS1A01G119300 chr1B 79.348 92 9 7 3345 3433 270786811 270786895 4.900000e-04 56.5
9 TraesCS1A01G119300 chr3D 73.273 1448 268 88 1045 2455 75962138 75963503 1.510000e-113 420.0
10 TraesCS1A01G119300 chr3D 82.394 284 50 0 2115 2398 75947851 75948134 7.530000e-62 248.0
11 TraesCS1A01G119300 chr6A 98.773 163 2 0 1 163 593304225 593304063 1.230000e-74 291.0
12 TraesCS1A01G119300 chr7D 96.933 163 5 0 1 163 192036452 192036290 1.240000e-69 274.0
13 TraesCS1A01G119300 chr6D 96.933 163 5 0 1 163 471265429 471265267 1.240000e-69 274.0
14 TraesCS1A01G119300 chr6D 73.276 348 69 16 1734 2063 3038304 3037963 4.790000e-19 106.0
15 TraesCS1A01G119300 chr5D 96.933 163 5 0 1 163 14722486 14722648 1.240000e-69 274.0
16 TraesCS1A01G119300 chr5D 96.933 163 5 0 1 163 378650105 378650267 1.240000e-69 274.0
17 TraesCS1A01G119300 chr5D 96.933 163 5 0 1 163 538261940 538262102 1.240000e-69 274.0
18 TraesCS1A01G119300 chr5D 77.778 225 40 9 3200 3422 84007552 84007768 2.850000e-26 130.0
19 TraesCS1A01G119300 chr5D 85.333 75 10 1 648 722 405443958 405443885 3.760000e-10 76.8
20 TraesCS1A01G119300 chr5B 96.933 163 5 0 1 163 452683608 452683770 1.240000e-69 274.0
21 TraesCS1A01G119300 chr5B 84.242 165 20 6 2970 3128 514067824 514067988 4.690000e-34 156.0
22 TraesCS1A01G119300 chr5B 83.636 165 19 6 2970 3127 706766616 706766453 7.850000e-32 148.0
23 TraesCS1A01G119300 chr6B 97.484 159 4 0 1 159 79804027 79803869 4.470000e-69 272.0
24 TraesCS1A01G119300 chr6B 82.941 170 19 6 2970 3132 347599684 347599850 1.020000e-30 145.0
25 TraesCS1A01G119300 chr6B 69.937 958 201 64 1045 1963 6213362 6212453 3.730000e-15 93.5
26 TraesCS1A01G119300 chr3A 80.712 337 57 6 2123 2455 90365158 90365490 4.500000e-64 255.0
27 TraesCS1A01G119300 chr3A 79.710 345 62 6 2115 2455 90294356 90294696 3.500000e-60 243.0
28 TraesCS1A01G119300 chr3B 80.290 345 60 6 2115 2455 123034373 123034713 1.620000e-63 254.0
29 TraesCS1A01G119300 chr3B 80.986 284 54 0 2115 2398 122827321 122827604 3.530000e-55 226.0
30 TraesCS1A01G119300 chr7A 80.392 255 41 8 2127 2378 543432112 543432360 5.990000e-43 185.0
31 TraesCS1A01G119300 chr2B 83.529 170 20 6 2970 3132 150942316 150942484 6.070000e-33 152.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G119300 chr1A 130148211 130151722 3511 False 2824.5 5347 100.0000 1 3512 2 chr1A.!!$F1 3511
1 TraesCS1A01G119300 chr1D 118510298 118512776 2478 False 1834.5 3249 92.6745 820 3459 2 chr1D.!!$F1 2639
2 TraesCS1A01G119300 chr1B 180405644 180407599 1955 False 3157.0 3157 95.8380 822 2775 1 chr1B.!!$F2 1953
3 TraesCS1A01G119300 chr3D 75962138 75963503 1365 False 420.0 420 73.2730 1045 2455 1 chr3D.!!$F2 1410

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
812 813 0.038892 ATTCGGTGTCGTGCGTTAGT 60.039 50.0 0.0 0.0 37.69 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2568 2595 0.249868 CAGAATCTCCCGCGGCATTA 60.25 55.0 22.85 4.69 0.0 1.9 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.737830 TTCATCACCGTCGCACCA 59.262 55.556 0.00 0.00 0.00 4.17
18 19 1.069935 TTCATCACCGTCGCACCAA 59.930 52.632 0.00 0.00 0.00 3.67
19 20 0.948623 TTCATCACCGTCGCACCAAG 60.949 55.000 0.00 0.00 0.00 3.61
20 21 2.742372 ATCACCGTCGCACCAAGC 60.742 61.111 0.00 0.00 40.87 4.01
21 22 3.529341 ATCACCGTCGCACCAAGCA 62.529 57.895 0.00 0.00 46.13 3.91
22 23 4.012895 CACCGTCGCACCAAGCAC 62.013 66.667 0.00 0.00 46.13 4.40
23 24 4.539083 ACCGTCGCACCAAGCACA 62.539 61.111 0.00 0.00 46.13 4.57
24 25 3.049674 CCGTCGCACCAAGCACAT 61.050 61.111 0.00 0.00 46.13 3.21
25 26 2.616330 CCGTCGCACCAAGCACATT 61.616 57.895 0.00 0.00 46.13 2.71
26 27 1.440850 CGTCGCACCAAGCACATTG 60.441 57.895 0.00 0.00 46.13 2.82
27 28 1.840630 CGTCGCACCAAGCACATTGA 61.841 55.000 0.00 0.00 46.13 2.57
28 29 0.110056 GTCGCACCAAGCACATTGAG 60.110 55.000 0.00 0.00 46.13 3.02
29 30 1.443194 CGCACCAAGCACATTGAGC 60.443 57.895 0.00 0.00 46.13 4.26
30 31 1.859427 CGCACCAAGCACATTGAGCT 61.859 55.000 2.49 2.49 46.13 4.09
39 40 4.160642 AGCACATTGAGCTTGATATCCA 57.839 40.909 2.49 0.00 39.87 3.41
40 41 4.726583 AGCACATTGAGCTTGATATCCAT 58.273 39.130 2.49 0.00 39.87 3.41
41 42 5.138276 AGCACATTGAGCTTGATATCCATT 58.862 37.500 2.49 0.00 39.87 3.16
42 43 5.597182 AGCACATTGAGCTTGATATCCATTT 59.403 36.000 2.49 0.00 39.87 2.32
43 44 6.097839 AGCACATTGAGCTTGATATCCATTTT 59.902 34.615 2.49 0.00 39.87 1.82
44 45 6.200286 GCACATTGAGCTTGATATCCATTTTG 59.800 38.462 0.00 0.00 0.00 2.44
45 46 7.262772 CACATTGAGCTTGATATCCATTTTGT 58.737 34.615 0.00 0.00 0.00 2.83
46 47 7.762615 CACATTGAGCTTGATATCCATTTTGTT 59.237 33.333 0.00 0.00 0.00 2.83
47 48 7.977853 ACATTGAGCTTGATATCCATTTTGTTC 59.022 33.333 0.00 0.00 0.00 3.18
48 49 6.122850 TGAGCTTGATATCCATTTTGTTCG 57.877 37.500 0.00 0.00 0.00 3.95
49 50 5.066375 TGAGCTTGATATCCATTTTGTTCGG 59.934 40.000 0.00 0.00 0.00 4.30
50 51 4.339247 AGCTTGATATCCATTTTGTTCGGG 59.661 41.667 0.00 0.00 0.00 5.14
51 52 4.338118 GCTTGATATCCATTTTGTTCGGGA 59.662 41.667 0.00 0.00 0.00 5.14
52 53 5.010012 GCTTGATATCCATTTTGTTCGGGAT 59.990 40.000 0.00 0.00 42.55 3.85
53 54 6.633500 TTGATATCCATTTTGTTCGGGATC 57.367 37.500 0.00 0.00 40.49 3.36
54 55 5.689835 TGATATCCATTTTGTTCGGGATCA 58.310 37.500 0.00 0.00 40.49 2.92
55 56 5.764686 TGATATCCATTTTGTTCGGGATCAG 59.235 40.000 0.00 0.00 40.49 2.90
56 57 2.722094 TCCATTTTGTTCGGGATCAGG 58.278 47.619 0.00 0.00 0.00 3.86
57 58 2.041081 TCCATTTTGTTCGGGATCAGGT 59.959 45.455 0.00 0.00 0.00 4.00
58 59 2.164219 CCATTTTGTTCGGGATCAGGTG 59.836 50.000 0.00 0.00 0.00 4.00
59 60 1.904287 TTTTGTTCGGGATCAGGTGG 58.096 50.000 0.00 0.00 0.00 4.61
60 61 0.608035 TTTGTTCGGGATCAGGTGGC 60.608 55.000 0.00 0.00 0.00 5.01
61 62 1.488705 TTGTTCGGGATCAGGTGGCT 61.489 55.000 0.00 0.00 0.00 4.75
62 63 1.153349 GTTCGGGATCAGGTGGCTC 60.153 63.158 0.00 0.00 0.00 4.70
63 64 1.306141 TTCGGGATCAGGTGGCTCT 60.306 57.895 0.00 0.00 0.00 4.09
64 65 0.909610 TTCGGGATCAGGTGGCTCTT 60.910 55.000 0.00 0.00 0.00 2.85
65 66 1.153289 CGGGATCAGGTGGCTCTTG 60.153 63.158 0.00 0.00 0.00 3.02
66 67 1.225704 GGGATCAGGTGGCTCTTGG 59.774 63.158 0.00 0.00 0.00 3.61
67 68 1.452833 GGATCAGGTGGCTCTTGGC 60.453 63.158 0.00 0.00 40.90 4.52
76 77 2.665185 GCTCTTGGCCACGTTCGT 60.665 61.111 3.88 0.00 34.27 3.85
77 78 2.954753 GCTCTTGGCCACGTTCGTG 61.955 63.158 3.88 16.87 36.03 4.35
78 79 1.594293 CTCTTGGCCACGTTCGTGT 60.594 57.895 20.93 0.00 34.59 4.49
79 80 1.153329 TCTTGGCCACGTTCGTGTT 60.153 52.632 20.93 0.00 34.59 3.32
80 81 1.155424 TCTTGGCCACGTTCGTGTTC 61.155 55.000 20.93 13.82 34.59 3.18
81 82 1.153329 TTGGCCACGTTCGTGTTCT 60.153 52.632 20.93 0.00 34.59 3.01
82 83 1.433053 TTGGCCACGTTCGTGTTCTG 61.433 55.000 20.93 9.14 34.59 3.02
83 84 2.248431 GCCACGTTCGTGTTCTGC 59.752 61.111 20.93 14.27 34.59 4.26
84 85 2.530497 GCCACGTTCGTGTTCTGCA 61.530 57.895 20.93 0.00 34.59 4.41
85 86 1.275657 CCACGTTCGTGTTCTGCAC 59.724 57.895 20.93 0.00 44.36 4.57
92 93 4.134623 GTGTTCTGCACGTTCCCA 57.865 55.556 0.00 0.00 38.45 4.37
93 94 1.647084 GTGTTCTGCACGTTCCCAC 59.353 57.895 0.00 0.00 38.45 4.61
94 95 1.525077 TGTTCTGCACGTTCCCACC 60.525 57.895 0.00 0.00 0.00 4.61
95 96 1.227853 GTTCTGCACGTTCCCACCT 60.228 57.895 0.00 0.00 0.00 4.00
96 97 1.070786 TTCTGCACGTTCCCACCTC 59.929 57.895 0.00 0.00 0.00 3.85
97 98 2.358737 CTGCACGTTCCCACCTCC 60.359 66.667 0.00 0.00 0.00 4.30
98 99 3.901797 CTGCACGTTCCCACCTCCC 62.902 68.421 0.00 0.00 0.00 4.30
99 100 3.948719 GCACGTTCCCACCTCCCA 61.949 66.667 0.00 0.00 0.00 4.37
100 101 2.833227 CACGTTCCCACCTCCCAA 59.167 61.111 0.00 0.00 0.00 4.12
101 102 1.599797 CACGTTCCCACCTCCCAAC 60.600 63.158 0.00 0.00 0.00 3.77
102 103 2.073716 ACGTTCCCACCTCCCAACA 61.074 57.895 0.00 0.00 0.00 3.33
103 104 1.149627 CGTTCCCACCTCCCAACAA 59.850 57.895 0.00 0.00 0.00 2.83
104 105 0.251165 CGTTCCCACCTCCCAACAAT 60.251 55.000 0.00 0.00 0.00 2.71
105 106 1.821666 CGTTCCCACCTCCCAACAATT 60.822 52.381 0.00 0.00 0.00 2.32
106 107 2.325484 GTTCCCACCTCCCAACAATTT 58.675 47.619 0.00 0.00 0.00 1.82
107 108 3.502356 GTTCCCACCTCCCAACAATTTA 58.498 45.455 0.00 0.00 0.00 1.40
108 109 3.163616 TCCCACCTCCCAACAATTTAC 57.836 47.619 0.00 0.00 0.00 2.01
109 110 2.176045 CCCACCTCCCAACAATTTACC 58.824 52.381 0.00 0.00 0.00 2.85
110 111 1.816224 CCACCTCCCAACAATTTACCG 59.184 52.381 0.00 0.00 0.00 4.02
111 112 2.553466 CCACCTCCCAACAATTTACCGA 60.553 50.000 0.00 0.00 0.00 4.69
112 113 2.486592 CACCTCCCAACAATTTACCGAC 59.513 50.000 0.00 0.00 0.00 4.79
113 114 2.106857 ACCTCCCAACAATTTACCGACA 59.893 45.455 0.00 0.00 0.00 4.35
114 115 3.245122 ACCTCCCAACAATTTACCGACAT 60.245 43.478 0.00 0.00 0.00 3.06
115 116 3.377172 CCTCCCAACAATTTACCGACATC 59.623 47.826 0.00 0.00 0.00 3.06
116 117 4.006989 CTCCCAACAATTTACCGACATCA 58.993 43.478 0.00 0.00 0.00 3.07
117 118 4.594970 TCCCAACAATTTACCGACATCAT 58.405 39.130 0.00 0.00 0.00 2.45
118 119 4.397730 TCCCAACAATTTACCGACATCATG 59.602 41.667 0.00 0.00 0.00 3.07
119 120 4.397730 CCCAACAATTTACCGACATCATGA 59.602 41.667 0.00 0.00 0.00 3.07
120 121 5.331902 CCAACAATTTACCGACATCATGAC 58.668 41.667 0.00 0.00 0.00 3.06
121 122 5.331902 CAACAATTTACCGACATCATGACC 58.668 41.667 0.00 0.00 0.00 4.02
122 123 4.584874 ACAATTTACCGACATCATGACCA 58.415 39.130 0.00 0.00 0.00 4.02
123 124 5.007034 ACAATTTACCGACATCATGACCAA 58.993 37.500 0.00 0.00 0.00 3.67
124 125 5.475220 ACAATTTACCGACATCATGACCAAA 59.525 36.000 0.00 0.00 0.00 3.28
125 126 5.818136 ATTTACCGACATCATGACCAAAG 57.182 39.130 0.00 0.00 0.00 2.77
126 127 2.113860 ACCGACATCATGACCAAAGG 57.886 50.000 0.00 0.81 0.00 3.11
127 128 0.734889 CCGACATCATGACCAAAGGC 59.265 55.000 0.00 0.00 0.00 4.35
128 129 1.679944 CCGACATCATGACCAAAGGCT 60.680 52.381 0.00 0.00 0.00 4.58
129 130 2.086869 CGACATCATGACCAAAGGCTT 58.913 47.619 0.00 0.00 0.00 4.35
130 131 2.159476 CGACATCATGACCAAAGGCTTG 60.159 50.000 0.00 0.00 0.00 4.01
131 132 1.547372 ACATCATGACCAAAGGCTTGC 59.453 47.619 0.00 0.00 0.00 4.01
132 133 1.134907 CATCATGACCAAAGGCTTGCC 60.135 52.381 0.00 2.97 0.00 4.52
133 134 0.112995 TCATGACCAAAGGCTTGCCT 59.887 50.000 8.56 8.56 0.00 4.75
134 135 1.354031 TCATGACCAAAGGCTTGCCTA 59.646 47.619 15.12 0.00 0.00 3.93
135 136 1.474077 CATGACCAAAGGCTTGCCTAC 59.526 52.381 15.12 5.42 0.00 3.18
136 137 0.605319 TGACCAAAGGCTTGCCTACG 60.605 55.000 15.12 8.72 0.00 3.51
137 138 0.321298 GACCAAAGGCTTGCCTACGA 60.321 55.000 15.12 0.00 0.00 3.43
138 139 0.605589 ACCAAAGGCTTGCCTACGAC 60.606 55.000 15.12 0.00 0.00 4.34
139 140 1.635663 CCAAAGGCTTGCCTACGACG 61.636 60.000 15.12 0.00 0.00 5.12
140 141 0.949105 CAAAGGCTTGCCTACGACGT 60.949 55.000 15.12 5.52 0.00 4.34
141 142 0.669625 AAAGGCTTGCCTACGACGTC 60.670 55.000 15.12 5.18 0.00 4.34
142 143 1.533469 AAGGCTTGCCTACGACGTCT 61.533 55.000 15.12 3.37 0.00 4.18
143 144 1.080025 GGCTTGCCTACGACGTCTT 60.080 57.895 14.70 6.93 0.00 3.01
144 145 0.669625 GGCTTGCCTACGACGTCTTT 60.670 55.000 14.70 2.72 0.00 2.52
145 146 0.714439 GCTTGCCTACGACGTCTTTC 59.286 55.000 14.70 0.00 0.00 2.62
146 147 0.982673 CTTGCCTACGACGTCTTTCG 59.017 55.000 14.70 3.09 44.87 3.46
147 148 0.592637 TTGCCTACGACGTCTTTCGA 59.407 50.000 14.70 0.00 41.78 3.71
148 149 0.167470 TGCCTACGACGTCTTTCGAG 59.833 55.000 14.70 0.00 41.78 4.04
149 150 0.522915 GCCTACGACGTCTTTCGAGG 60.523 60.000 14.70 9.35 41.78 4.63
150 151 1.081892 CCTACGACGTCTTTCGAGGA 58.918 55.000 14.70 0.00 41.78 3.71
151 152 1.466167 CCTACGACGTCTTTCGAGGAA 59.534 52.381 14.70 0.00 41.78 3.36
152 153 2.097142 CCTACGACGTCTTTCGAGGAAT 59.903 50.000 14.70 0.00 41.78 3.01
153 154 2.719426 ACGACGTCTTTCGAGGAATT 57.281 45.000 14.70 0.00 41.78 2.17
154 155 2.593257 ACGACGTCTTTCGAGGAATTC 58.407 47.619 14.70 0.00 41.78 2.17
155 156 1.918609 CGACGTCTTTCGAGGAATTCC 59.081 52.381 17.31 17.31 41.78 3.01
156 157 1.918609 GACGTCTTTCGAGGAATTCCG 59.081 52.381 18.82 8.25 42.86 4.30
157 158 1.278238 CGTCTTTCGAGGAATTCCGG 58.722 55.000 18.82 14.61 42.86 5.14
158 159 1.403780 CGTCTTTCGAGGAATTCCGGT 60.404 52.381 18.82 1.95 42.86 5.28
159 160 2.269172 GTCTTTCGAGGAATTCCGGTC 58.731 52.381 18.82 10.93 42.08 4.79
160 161 1.206371 TCTTTCGAGGAATTCCGGTCC 59.794 52.381 18.82 0.22 42.08 4.46
161 162 0.978151 TTTCGAGGAATTCCGGTCCA 59.022 50.000 18.82 1.86 42.08 4.02
162 163 0.535335 TTCGAGGAATTCCGGTCCAG 59.465 55.000 18.82 7.96 42.08 3.86
636 637 1.276622 AGGACAGAATAAGGGCACGT 58.723 50.000 0.00 0.00 0.00 4.49
637 638 1.066143 AGGACAGAATAAGGGCACGTG 60.066 52.381 12.28 12.28 0.00 4.49
638 639 1.338769 GGACAGAATAAGGGCACGTGT 60.339 52.381 18.38 0.00 0.00 4.49
639 640 1.732259 GACAGAATAAGGGCACGTGTG 59.268 52.381 18.38 6.44 0.00 3.82
640 641 1.086696 CAGAATAAGGGCACGTGTGG 58.913 55.000 18.38 0.00 0.00 4.17
648 649 4.152625 GCACGTGTGGCTCGCATC 62.153 66.667 18.38 0.00 0.00 3.91
649 650 3.490759 CACGTGTGGCTCGCATCC 61.491 66.667 7.58 0.00 0.00 3.51
670 671 4.986587 CGTGTCCGTTCGACCGCA 62.987 66.667 0.00 0.00 41.18 5.69
671 672 2.659244 GTGTCCGTTCGACCGCAA 60.659 61.111 0.00 0.00 41.18 4.85
672 673 2.106534 TGTCCGTTCGACCGCAAA 59.893 55.556 0.00 0.00 41.18 3.68
673 674 2.239124 TGTCCGTTCGACCGCAAAC 61.239 57.895 0.00 0.00 41.18 2.93
674 675 1.952635 GTCCGTTCGACCGCAAACT 60.953 57.895 0.00 0.00 35.23 2.66
675 676 1.662446 TCCGTTCGACCGCAAACTC 60.662 57.895 0.00 0.00 0.00 3.01
676 677 2.464189 CGTTCGACCGCAAACTCG 59.536 61.111 0.00 0.00 0.00 4.18
683 684 3.739167 CCGCAAACTCGGTCCAAA 58.261 55.556 0.00 0.00 44.18 3.28
684 685 2.026522 CCGCAAACTCGGTCCAAAA 58.973 52.632 0.00 0.00 44.18 2.44
685 686 0.596082 CCGCAAACTCGGTCCAAAAT 59.404 50.000 0.00 0.00 44.18 1.82
686 687 1.000717 CCGCAAACTCGGTCCAAAATT 60.001 47.619 0.00 0.00 44.18 1.82
687 688 2.226912 CCGCAAACTCGGTCCAAAATTA 59.773 45.455 0.00 0.00 44.18 1.40
688 689 3.304794 CCGCAAACTCGGTCCAAAATTAA 60.305 43.478 0.00 0.00 44.18 1.40
689 690 4.291783 CGCAAACTCGGTCCAAAATTAAA 58.708 39.130 0.00 0.00 0.00 1.52
690 691 4.147479 CGCAAACTCGGTCCAAAATTAAAC 59.853 41.667 0.00 0.00 0.00 2.01
691 692 4.446385 GCAAACTCGGTCCAAAATTAAACC 59.554 41.667 0.00 0.00 0.00 3.27
700 701 6.277605 GGTCCAAAATTAAACCGATAATGGG 58.722 40.000 0.00 0.00 0.00 4.00
701 702 6.127281 GGTCCAAAATTAAACCGATAATGGGT 60.127 38.462 0.00 0.00 40.20 4.51
703 704 7.276878 GTCCAAAATTAAACCGATAATGGGTTG 59.723 37.037 2.45 0.00 46.75 3.77
704 705 7.178628 TCCAAAATTAAACCGATAATGGGTTGA 59.821 33.333 2.45 0.00 46.75 3.18
705 706 7.819900 CCAAAATTAAACCGATAATGGGTTGAA 59.180 33.333 2.45 2.26 46.75 2.69
706 707 9.209175 CAAAATTAAACCGATAATGGGTTGAAA 57.791 29.630 2.45 2.02 46.75 2.69
707 708 8.996024 AAATTAAACCGATAATGGGTTGAAAG 57.004 30.769 2.45 0.00 46.75 2.62
708 709 4.450082 AAACCGATAATGGGTTGAAAGC 57.550 40.909 2.45 0.00 46.75 3.51
709 710 2.014128 ACCGATAATGGGTTGAAAGCG 58.986 47.619 0.00 0.00 32.70 4.68
710 711 1.333619 CCGATAATGGGTTGAAAGCGG 59.666 52.381 0.00 0.00 0.00 5.52
711 712 2.285083 CGATAATGGGTTGAAAGCGGA 58.715 47.619 0.00 0.00 0.00 5.54
712 713 2.878406 CGATAATGGGTTGAAAGCGGAT 59.122 45.455 0.00 0.00 0.00 4.18
713 714 4.062293 CGATAATGGGTTGAAAGCGGATA 58.938 43.478 0.00 0.00 0.00 2.59
714 715 4.513692 CGATAATGGGTTGAAAGCGGATAA 59.486 41.667 0.00 0.00 0.00 1.75
715 716 5.008217 CGATAATGGGTTGAAAGCGGATAAA 59.992 40.000 0.00 0.00 0.00 1.40
716 717 6.459024 CGATAATGGGTTGAAAGCGGATAAAA 60.459 38.462 0.00 0.00 0.00 1.52
717 718 5.476091 AATGGGTTGAAAGCGGATAAAAA 57.524 34.783 0.00 0.00 0.00 1.94
742 743 3.971858 GACAGTCTGTCTACGACCG 57.028 57.895 23.25 0.00 43.73 4.79
743 744 0.179194 GACAGTCTGTCTACGACCGC 60.179 60.000 23.25 0.00 43.73 5.68
744 745 1.226046 CAGTCTGTCTACGACCGCG 60.226 63.158 0.00 0.00 44.79 6.46
745 746 2.576317 GTCTGTCTACGACCGCGC 60.576 66.667 0.00 0.00 42.48 6.86
746 747 4.156622 TCTGTCTACGACCGCGCG 62.157 66.667 25.67 25.67 42.48 6.86
748 749 3.940975 CTGTCTACGACCGCGCGTT 62.941 63.158 29.95 16.54 42.71 4.84
749 750 3.530104 GTCTACGACCGCGCGTTG 61.530 66.667 29.95 21.32 42.71 4.10
750 751 4.764336 TCTACGACCGCGCGTTGG 62.764 66.667 29.95 19.43 42.71 3.77
751 752 4.764336 CTACGACCGCGCGTTGGA 62.764 66.667 29.95 15.86 42.71 3.53
752 753 4.118995 TACGACCGCGCGTTGGAT 62.119 61.111 29.95 12.37 42.71 3.41
758 759 4.817063 CGCGCGTTGGATGGCTTG 62.817 66.667 24.19 0.00 0.00 4.01
759 760 3.737172 GCGCGTTGGATGGCTTGT 61.737 61.111 8.43 0.00 0.00 3.16
760 761 2.953821 CGCGTTGGATGGCTTGTT 59.046 55.556 0.00 0.00 0.00 2.83
761 762 1.285641 CGCGTTGGATGGCTTGTTT 59.714 52.632 0.00 0.00 0.00 2.83
762 763 0.318614 CGCGTTGGATGGCTTGTTTT 60.319 50.000 0.00 0.00 0.00 2.43
763 764 1.139163 GCGTTGGATGGCTTGTTTTG 58.861 50.000 0.00 0.00 0.00 2.44
764 765 1.537990 GCGTTGGATGGCTTGTTTTGT 60.538 47.619 0.00 0.00 0.00 2.83
765 766 2.393764 CGTTGGATGGCTTGTTTTGTC 58.606 47.619 0.00 0.00 0.00 3.18
766 767 2.754472 GTTGGATGGCTTGTTTTGTCC 58.246 47.619 0.00 0.00 0.00 4.02
767 768 0.958091 TGGATGGCTTGTTTTGTCCG 59.042 50.000 0.00 0.00 0.00 4.79
768 769 0.958822 GGATGGCTTGTTTTGTCCGT 59.041 50.000 0.00 0.00 0.00 4.69
769 770 1.339929 GGATGGCTTGTTTTGTCCGTT 59.660 47.619 0.00 0.00 0.00 4.44
770 771 2.223947 GGATGGCTTGTTTTGTCCGTTT 60.224 45.455 0.00 0.00 0.00 3.60
771 772 3.004944 GGATGGCTTGTTTTGTCCGTTTA 59.995 43.478 0.00 0.00 0.00 2.01
772 773 3.423996 TGGCTTGTTTTGTCCGTTTAC 57.576 42.857 0.00 0.00 0.00 2.01
773 774 2.099427 TGGCTTGTTTTGTCCGTTTACC 59.901 45.455 0.00 0.00 0.00 2.85
774 775 2.544277 GGCTTGTTTTGTCCGTTTACCC 60.544 50.000 0.00 0.00 0.00 3.69
775 776 2.099427 GCTTGTTTTGTCCGTTTACCCA 59.901 45.455 0.00 0.00 0.00 4.51
776 777 3.429135 GCTTGTTTTGTCCGTTTACCCAA 60.429 43.478 0.00 0.00 0.00 4.12
777 778 4.745649 CTTGTTTTGTCCGTTTACCCAAA 58.254 39.130 0.00 0.00 0.00 3.28
778 779 4.107363 TGTTTTGTCCGTTTACCCAAAC 57.893 40.909 0.00 0.00 40.60 2.93
786 787 0.587768 GTTTACCCAAACGGACACGG 59.412 55.000 0.00 0.00 46.48 4.94
787 788 0.467384 TTTACCCAAACGGACACGGA 59.533 50.000 0.00 0.00 46.48 4.69
788 789 0.249826 TTACCCAAACGGACACGGAC 60.250 55.000 0.00 0.00 46.48 4.79
789 790 2.419057 TACCCAAACGGACACGGACG 62.419 60.000 0.00 0.00 46.48 4.79
790 791 2.027897 CCAAACGGACACGGACGA 59.972 61.111 0.00 0.00 46.48 4.20
791 792 2.305127 CCAAACGGACACGGACGAC 61.305 63.158 0.00 0.00 46.48 4.34
792 793 2.028043 AAACGGACACGGACGACC 59.972 61.111 0.00 0.00 46.48 4.79
793 794 2.784356 AAACGGACACGGACGACCA 61.784 57.895 4.48 0.00 46.48 4.02
794 795 2.091102 AAACGGACACGGACGACCAT 62.091 55.000 4.48 0.00 46.48 3.55
795 796 2.091102 AACGGACACGGACGACCATT 62.091 55.000 4.48 0.00 46.48 3.16
796 797 1.804326 CGGACACGGACGACCATTC 60.804 63.158 4.48 0.00 36.18 2.67
807 808 2.736995 ACCATTCGGTGTCGTGCG 60.737 61.111 0.00 0.00 46.79 5.34
808 809 2.736995 CCATTCGGTGTCGTGCGT 60.737 61.111 0.00 0.00 37.69 5.24
809 810 2.314647 CCATTCGGTGTCGTGCGTT 61.315 57.895 0.00 0.00 37.69 4.84
810 811 1.009903 CCATTCGGTGTCGTGCGTTA 61.010 55.000 0.00 0.00 37.69 3.18
811 812 0.365523 CATTCGGTGTCGTGCGTTAG 59.634 55.000 0.00 0.00 37.69 2.34
812 813 0.038892 ATTCGGTGTCGTGCGTTAGT 60.039 50.000 0.00 0.00 37.69 2.24
813 814 0.935831 TTCGGTGTCGTGCGTTAGTG 60.936 55.000 0.00 0.00 37.69 2.74
814 815 2.369629 CGGTGTCGTGCGTTAGTGG 61.370 63.158 0.00 0.00 0.00 4.00
815 816 1.300388 GGTGTCGTGCGTTAGTGGT 60.300 57.895 0.00 0.00 0.00 4.16
816 817 1.554042 GGTGTCGTGCGTTAGTGGTG 61.554 60.000 0.00 0.00 0.00 4.17
817 818 1.952133 TGTCGTGCGTTAGTGGTGC 60.952 57.895 0.00 0.00 0.00 5.01
818 819 2.731721 TCGTGCGTTAGTGGTGCG 60.732 61.111 0.00 0.00 0.00 5.34
837 838 2.707849 TTAGTCGGCCGCCTGAGAC 61.708 63.158 20.89 11.94 0.00 3.36
862 865 1.154093 CGACTCGCGTCTAGCCAAA 60.154 57.895 5.77 0.00 44.76 3.28
879 882 3.126858 GCCAAAGTTGATATGCTTCGTCA 59.873 43.478 0.00 0.00 0.00 4.35
1018 1021 0.694771 AATGGAGCTGCAGGAAGACA 59.305 50.000 17.12 0.00 0.00 3.41
1019 1022 0.694771 ATGGAGCTGCAGGAAGACAA 59.305 50.000 17.12 0.00 0.00 3.18
1027 1030 2.357517 AGGAAGACAAGCGTGCCG 60.358 61.111 0.00 0.00 0.00 5.69
1518 1527 1.135286 GCCGCGTACTACCACTACTTT 60.135 52.381 4.92 0.00 0.00 2.66
1545 1557 3.151710 CGGGAGGCCGTCATGGTA 61.152 66.667 0.00 0.00 41.21 3.25
1764 1779 2.512515 GACGCCATGGAGCCTGAC 60.513 66.667 18.40 0.00 0.00 3.51
2114 2135 3.219603 CACGTACGACGACGACGC 61.220 66.667 24.41 3.67 46.05 5.19
2481 2508 1.144936 CCGGAGCCTGATGGAGTTC 59.855 63.158 0.00 0.00 34.57 3.01
2543 2570 2.830285 GCTGCACGTTTGTTCCGGT 61.830 57.895 0.00 0.00 0.00 5.28
2544 2571 1.725066 CTGCACGTTTGTTCCGGTT 59.275 52.632 0.00 0.00 0.00 4.44
2545 2572 0.938713 CTGCACGTTTGTTCCGGTTA 59.061 50.000 0.00 0.00 0.00 2.85
2557 2584 7.513132 GTTTGTTCCGGTTATTAGTTACTGTC 58.487 38.462 0.00 0.00 0.00 3.51
2567 2594 8.186821 GGTTATTAGTTACTGTCGTGAGTGTAT 58.813 37.037 0.00 0.00 0.00 2.29
2568 2595 9.565213 GTTATTAGTTACTGTCGTGAGTGTATT 57.435 33.333 0.00 0.00 0.00 1.89
2585 2612 1.523758 ATTAATGCCGCGGGAGATTC 58.476 50.000 29.38 9.52 0.00 2.52
2591 2618 1.735376 GCCGCGGGAGATTCTGACTA 61.735 60.000 29.38 0.00 0.00 2.59
2619 2646 3.912528 CCCATGGAAGGATAAGAGGATCA 59.087 47.826 15.22 0.00 37.82 2.92
2699 2730 2.432510 GGTCATTCTCAAGACGGAGGAT 59.567 50.000 0.00 0.00 33.22 3.24
2829 2865 3.684788 CACTCCAAGTGGGTTCTTAATCG 59.315 47.826 0.00 0.00 42.35 3.34
2837 2873 3.621715 GTGGGTTCTTAATCGTGTCATCC 59.378 47.826 0.00 0.00 0.00 3.51
2840 2876 2.218953 TCTTAATCGTGTCATCCGGC 57.781 50.000 0.00 0.00 0.00 6.13
2848 2884 1.335964 CGTGTCATCCGGCGATAGAAT 60.336 52.381 9.30 0.00 39.76 2.40
2907 2943 7.578310 AAGTATTGTCATCTAAGTAGCCGTA 57.422 36.000 0.00 0.00 0.00 4.02
2913 2949 5.184479 TGTCATCTAAGTAGCCGTACACTTT 59.816 40.000 2.07 0.00 36.44 2.66
2946 2992 1.153086 CAGCAAGCTATTCCGGCCT 60.153 57.895 0.00 0.00 0.00 5.19
2947 2993 1.147153 AGCAAGCTATTCCGGCCTC 59.853 57.895 0.00 0.00 0.00 4.70
2952 2998 3.118592 GCAAGCTATTCCGGCCTCTATAT 60.119 47.826 0.00 0.00 0.00 0.86
2960 3006 1.863662 CGGCCTCTATATGTCCGCGT 61.864 60.000 4.92 0.00 33.36 6.01
2962 3008 1.542915 GGCCTCTATATGTCCGCGTAA 59.457 52.381 4.92 0.00 0.00 3.18
2965 3011 3.231965 CCTCTATATGTCCGCGTAAACG 58.768 50.000 4.92 0.00 43.27 3.60
2968 3014 1.843992 ATATGTCCGCGTAAACGACC 58.156 50.000 4.92 0.00 43.02 4.79
2971 3017 4.418401 TCCGCGTAAACGACCGGG 62.418 66.667 17.43 8.28 40.38 5.73
2974 3020 2.356194 GCGTAAACGACCGGGTGT 60.356 61.111 3.30 0.00 43.02 4.16
2977 3023 0.875474 CGTAAACGACCGGGTGTGTT 60.875 55.000 3.30 6.48 43.02 3.32
2980 3026 1.378124 AAACGACCGGGTGTGTTTGG 61.378 55.000 20.35 0.00 33.59 3.28
2981 3027 2.203098 CGACCGGGTGTGTTTGGT 60.203 61.111 3.30 0.00 37.44 3.67
2982 3028 1.820481 CGACCGGGTGTGTTTGGTT 60.820 57.895 3.30 0.00 34.12 3.67
2983 3029 1.731093 GACCGGGTGTGTTTGGTTG 59.269 57.895 3.30 0.00 34.12 3.77
2986 3032 1.513158 CGGGTGTGTTTGGTTGCAA 59.487 52.632 0.00 0.00 0.00 4.08
2987 3033 0.108615 CGGGTGTGTTTGGTTGCAAA 60.109 50.000 0.00 0.00 0.00 3.68
2989 3035 1.650825 GGTGTGTTTGGTTGCAAAGG 58.349 50.000 0.00 0.00 0.00 3.11
2990 3036 1.205893 GGTGTGTTTGGTTGCAAAGGA 59.794 47.619 0.00 0.00 0.00 3.36
2991 3037 2.267426 GTGTGTTTGGTTGCAAAGGAC 58.733 47.619 0.00 0.00 0.00 3.85
2992 3038 2.094234 GTGTGTTTGGTTGCAAAGGACT 60.094 45.455 0.00 0.00 0.00 3.85
2993 3039 2.094286 TGTGTTTGGTTGCAAAGGACTG 60.094 45.455 0.00 0.00 0.00 3.51
2994 3040 2.165437 GTGTTTGGTTGCAAAGGACTGA 59.835 45.455 0.00 0.00 0.00 3.41
2995 3041 2.828520 TGTTTGGTTGCAAAGGACTGAA 59.171 40.909 0.00 0.00 0.00 3.02
2996 3042 3.186909 GTTTGGTTGCAAAGGACTGAAC 58.813 45.455 0.00 0.00 0.00 3.18
2997 3043 2.435372 TGGTTGCAAAGGACTGAACT 57.565 45.000 0.00 0.00 0.00 3.01
2999 3045 3.096092 TGGTTGCAAAGGACTGAACTTT 58.904 40.909 0.00 0.00 38.62 2.66
3000 3046 3.513515 TGGTTGCAAAGGACTGAACTTTT 59.486 39.130 0.00 0.00 36.09 2.27
3023 3069 7.439108 TTTTTGGTCCAAGGGATTAAAGAAA 57.561 32.000 4.09 0.00 32.73 2.52
3024 3070 7.439108 TTTTGGTCCAAGGGATTAAAGAAAA 57.561 32.000 4.09 0.00 32.73 2.29
3025 3071 7.439108 TTTGGTCCAAGGGATTAAAGAAAAA 57.561 32.000 4.09 0.00 32.73 1.94
3065 3111 6.370186 TTTTTCTAGTCCCTTAAGAGTCCC 57.630 41.667 3.36 0.00 0.00 4.46
3066 3112 4.969136 TTCTAGTCCCTTAAGAGTCCCT 57.031 45.455 3.36 0.00 0.00 4.20
3067 3113 4.523168 TCTAGTCCCTTAAGAGTCCCTC 57.477 50.000 3.36 0.00 0.00 4.30
3068 3114 2.553911 AGTCCCTTAAGAGTCCCTCC 57.446 55.000 3.36 0.00 0.00 4.30
3069 3115 2.012236 AGTCCCTTAAGAGTCCCTCCT 58.988 52.381 3.36 0.00 0.00 3.69
3070 3116 2.112190 GTCCCTTAAGAGTCCCTCCTG 58.888 57.143 3.36 0.00 0.00 3.86
3071 3117 1.722851 TCCCTTAAGAGTCCCTCCTGT 59.277 52.381 3.36 0.00 0.00 4.00
3072 3118 2.113777 TCCCTTAAGAGTCCCTCCTGTT 59.886 50.000 3.36 0.00 0.00 3.16
3073 3119 2.913617 CCCTTAAGAGTCCCTCCTGTTT 59.086 50.000 3.36 0.00 0.00 2.83
3074 3120 3.307762 CCCTTAAGAGTCCCTCCTGTTTG 60.308 52.174 3.36 0.00 0.00 2.93
3075 3121 3.307762 CCTTAAGAGTCCCTCCTGTTTGG 60.308 52.174 3.36 0.00 37.10 3.28
3076 3122 1.821088 AAGAGTCCCTCCTGTTTGGT 58.179 50.000 0.00 0.00 37.07 3.67
3077 3123 1.821088 AGAGTCCCTCCTGTTTGGTT 58.179 50.000 0.00 0.00 37.07 3.67
3078 3124 2.986050 AGAGTCCCTCCTGTTTGGTTA 58.014 47.619 0.00 0.00 37.07 2.85
3079 3125 2.638363 AGAGTCCCTCCTGTTTGGTTAC 59.362 50.000 0.00 0.00 37.07 2.50
3080 3126 2.370849 GAGTCCCTCCTGTTTGGTTACA 59.629 50.000 0.00 0.00 37.07 2.41
3081 3127 2.105993 AGTCCCTCCTGTTTGGTTACAC 59.894 50.000 0.00 0.00 37.07 2.90
3082 3128 2.128535 TCCCTCCTGTTTGGTTACACA 58.871 47.619 0.00 0.00 37.07 3.72
3083 3129 2.105821 TCCCTCCTGTTTGGTTACACAG 59.894 50.000 0.00 0.00 40.23 3.66
3084 3130 2.158667 CCCTCCTGTTTGGTTACACAGT 60.159 50.000 1.64 0.00 39.09 3.55
3085 3131 2.878406 CCTCCTGTTTGGTTACACAGTG 59.122 50.000 0.00 0.00 39.09 3.66
3086 3132 3.433031 CCTCCTGTTTGGTTACACAGTGA 60.433 47.826 7.81 0.00 39.09 3.41
3087 3133 4.389374 CTCCTGTTTGGTTACACAGTGAT 58.611 43.478 7.81 0.00 39.09 3.06
3088 3134 4.787551 TCCTGTTTGGTTACACAGTGATT 58.212 39.130 7.81 0.00 39.09 2.57
3089 3135 5.931294 TCCTGTTTGGTTACACAGTGATTA 58.069 37.500 7.81 0.00 39.09 1.75
3090 3136 6.358178 TCCTGTTTGGTTACACAGTGATTAA 58.642 36.000 7.81 0.00 39.09 1.40
3091 3137 6.829298 TCCTGTTTGGTTACACAGTGATTAAA 59.171 34.615 7.81 0.00 39.09 1.52
3092 3138 7.339721 TCCTGTTTGGTTACACAGTGATTAAAA 59.660 33.333 7.81 0.00 39.09 1.52
3093 3139 7.976734 CCTGTTTGGTTACACAGTGATTAAAAA 59.023 33.333 7.81 0.00 39.09 1.94
3123 3169 8.701908 TTTTTCTAGTCTAGTCTCTGTAACCA 57.298 34.615 6.77 0.00 0.00 3.67
3124 3170 8.701908 TTTTCTAGTCTAGTCTCTGTAACCAA 57.298 34.615 6.77 0.00 0.00 3.67
3125 3171 8.701908 TTTCTAGTCTAGTCTCTGTAACCAAA 57.298 34.615 6.77 0.00 0.00 3.28
3126 3172 7.684937 TCTAGTCTAGTCTCTGTAACCAAAC 57.315 40.000 6.77 0.00 0.00 2.93
3127 3173 7.229308 TCTAGTCTAGTCTCTGTAACCAAACA 58.771 38.462 6.77 0.00 0.00 2.83
3128 3174 6.334102 AGTCTAGTCTCTGTAACCAAACAG 57.666 41.667 0.00 0.00 46.78 3.16
3129 3175 5.244178 AGTCTAGTCTCTGTAACCAAACAGG 59.756 44.000 4.32 0.00 45.69 4.00
3131 3177 2.152016 GTCTCTGTAACCAAACAGGGC 58.848 52.381 4.32 0.00 45.87 5.19
3132 3178 1.771854 TCTCTGTAACCAAACAGGGCA 59.228 47.619 4.32 0.00 45.87 5.36
3133 3179 2.375174 TCTCTGTAACCAAACAGGGCAT 59.625 45.455 4.32 0.00 45.87 4.40
3134 3180 2.749621 CTCTGTAACCAAACAGGGCATC 59.250 50.000 4.32 0.00 45.69 3.91
3135 3181 2.107378 TCTGTAACCAAACAGGGCATCA 59.893 45.455 4.32 0.00 45.69 3.07
3136 3182 2.890311 CTGTAACCAAACAGGGCATCAA 59.110 45.455 0.00 0.00 42.63 2.57
3137 3183 3.300388 TGTAACCAAACAGGGCATCAAA 58.700 40.909 0.00 0.00 43.89 2.69
3138 3184 2.908688 AACCAAACAGGGCATCAAAC 57.091 45.000 0.00 0.00 43.89 2.93
3139 3185 1.786937 ACCAAACAGGGCATCAAACA 58.213 45.000 0.00 0.00 43.89 2.83
3140 3186 1.412343 ACCAAACAGGGCATCAAACAC 59.588 47.619 0.00 0.00 43.89 3.32
3141 3187 1.688197 CCAAACAGGGCATCAAACACT 59.312 47.619 0.00 0.00 0.00 3.55
3142 3188 2.288395 CCAAACAGGGCATCAAACACTC 60.288 50.000 0.00 0.00 0.00 3.51
3143 3189 2.361757 CAAACAGGGCATCAAACACTCA 59.638 45.455 0.00 0.00 0.00 3.41
3144 3190 2.592102 ACAGGGCATCAAACACTCAT 57.408 45.000 0.00 0.00 0.00 2.90
3145 3191 2.165167 ACAGGGCATCAAACACTCATG 58.835 47.619 0.00 0.00 0.00 3.07
3146 3192 2.224843 ACAGGGCATCAAACACTCATGA 60.225 45.455 0.00 0.00 0.00 3.07
3154 3200 1.237285 AAACACTCATGACCGCAGCC 61.237 55.000 0.00 0.00 0.00 4.85
3182 3228 6.201806 GCATCTCATGTCACCTAAATCTACAC 59.798 42.308 0.00 0.00 0.00 2.90
3187 3233 8.533569 TCATGTCACCTAAATCTACACTATGA 57.466 34.615 0.00 0.00 0.00 2.15
3189 3235 9.035607 CATGTCACCTAAATCTACACTATGAAC 57.964 37.037 0.00 0.00 0.00 3.18
3190 3236 7.553334 TGTCACCTAAATCTACACTATGAACC 58.447 38.462 0.00 0.00 0.00 3.62
3193 3239 6.761714 CACCTAAATCTACACTATGAACCCAC 59.238 42.308 0.00 0.00 0.00 4.61
3233 3279 8.495949 ACTATCGATGCAACCTAAAATAAATCG 58.504 33.333 8.54 0.00 37.58 3.34
3255 3301 9.698309 AATCGTATAGATCATCAACGAAATTCT 57.302 29.630 12.21 0.00 44.65 2.40
3256 3302 8.507470 TCGTATAGATCATCAACGAAATTCTG 57.493 34.615 7.27 0.00 39.40 3.02
3301 3347 4.694037 AGAACAAGCCGGTAGTTAATTCAC 59.306 41.667 1.90 0.00 0.00 3.18
3356 3402 3.278574 CCGGCAAATGGACAGAGATTTA 58.721 45.455 0.00 0.00 0.00 1.40
3401 3447 2.035632 ACAAAGATAGAGAGGGCCGAG 58.964 52.381 0.00 0.00 0.00 4.63
3409 3455 0.105778 GAGAGGGCCGAGGAATTCAG 59.894 60.000 7.93 0.00 0.00 3.02
3420 3466 0.729690 GGAATTCAGCACTTCCTCGC 59.270 55.000 7.93 0.00 38.31 5.03
3433 3479 4.394712 CTCGCCGGTCCTTTGCCT 62.395 66.667 1.90 0.00 0.00 4.75
3436 3482 2.650778 GCCGGTCCTTTGCCTTTG 59.349 61.111 1.90 0.00 0.00 2.77
3438 3484 1.659794 CCGGTCCTTTGCCTTTGTG 59.340 57.895 0.00 0.00 0.00 3.33
3448 3494 1.003718 GCCTTTGTGGTAGAGCGGT 60.004 57.895 0.00 0.00 38.35 5.68
3459 3505 0.822164 TAGAGCGGTTGTAGCCCTTC 59.178 55.000 0.00 0.00 34.64 3.46
3460 3506 1.192146 AGAGCGGTTGTAGCCCTTCA 61.192 55.000 0.00 0.00 34.64 3.02
3461 3507 0.107654 GAGCGGTTGTAGCCCTTCAT 60.108 55.000 0.00 0.00 34.64 2.57
3462 3508 0.392998 AGCGGTTGTAGCCCTTCATG 60.393 55.000 0.00 0.00 34.64 3.07
3463 3509 0.676782 GCGGTTGTAGCCCTTCATGT 60.677 55.000 0.00 0.00 0.00 3.21
3464 3510 1.406341 GCGGTTGTAGCCCTTCATGTA 60.406 52.381 0.00 0.00 0.00 2.29
3465 3511 2.550978 CGGTTGTAGCCCTTCATGTAG 58.449 52.381 0.00 0.00 0.00 2.74
3466 3512 2.741878 CGGTTGTAGCCCTTCATGTAGG 60.742 54.545 11.31 11.31 34.92 3.18
3470 3516 4.126524 GCCCTTCATGTAGGCGTC 57.873 61.111 12.74 1.03 36.84 5.19
3471 3517 1.220749 GCCCTTCATGTAGGCGTCA 59.779 57.895 12.74 0.00 36.84 4.35
3472 3518 0.392461 GCCCTTCATGTAGGCGTCAA 60.392 55.000 12.74 0.00 36.84 3.18
3473 3519 1.369625 CCCTTCATGTAGGCGTCAAC 58.630 55.000 12.74 0.00 33.73 3.18
3474 3520 1.338674 CCCTTCATGTAGGCGTCAACA 60.339 52.381 12.74 0.00 33.73 3.33
3475 3521 2.002586 CCTTCATGTAGGCGTCAACAG 58.997 52.381 5.33 0.00 0.00 3.16
3476 3522 1.394917 CTTCATGTAGGCGTCAACAGC 59.605 52.381 0.00 0.00 0.00 4.40
3477 3523 0.735978 TCATGTAGGCGTCAACAGCG 60.736 55.000 0.00 0.00 35.00 5.18
3478 3524 1.447838 ATGTAGGCGTCAACAGCGG 60.448 57.895 0.00 0.00 35.00 5.52
3479 3525 1.884075 ATGTAGGCGTCAACAGCGGA 61.884 55.000 0.00 0.00 35.00 5.54
3480 3526 1.373748 GTAGGCGTCAACAGCGGAA 60.374 57.895 0.00 0.00 35.00 4.30
3481 3527 1.080093 TAGGCGTCAACAGCGGAAG 60.080 57.895 0.00 0.00 35.00 3.46
3482 3528 2.501223 TAGGCGTCAACAGCGGAAGG 62.501 60.000 0.00 0.00 35.00 3.46
3483 3529 3.423154 GCGTCAACAGCGGAAGGG 61.423 66.667 0.00 0.00 0.00 3.95
3484 3530 2.742372 CGTCAACAGCGGAAGGGG 60.742 66.667 0.00 0.00 0.00 4.79
3485 3531 2.359975 GTCAACAGCGGAAGGGGG 60.360 66.667 0.00 0.00 0.00 5.40
3486 3532 2.852075 TCAACAGCGGAAGGGGGT 60.852 61.111 0.00 0.00 0.00 4.95
3487 3533 2.359975 CAACAGCGGAAGGGGGTC 60.360 66.667 0.00 0.00 0.00 4.46
3488 3534 2.852075 AACAGCGGAAGGGGGTCA 60.852 61.111 0.00 0.00 0.00 4.02
3489 3535 2.231380 AACAGCGGAAGGGGGTCAT 61.231 57.895 0.00 0.00 0.00 3.06
3490 3536 2.190578 CAGCGGAAGGGGGTCATC 59.809 66.667 0.00 0.00 0.00 2.92
3491 3537 3.470888 AGCGGAAGGGGGTCATCG 61.471 66.667 0.00 0.00 0.00 3.84
3492 3538 3.467226 GCGGAAGGGGGTCATCGA 61.467 66.667 0.00 0.00 0.00 3.59
3493 3539 3.026431 GCGGAAGGGGGTCATCGAA 62.026 63.158 0.00 0.00 0.00 3.71
3494 3540 1.153429 CGGAAGGGGGTCATCGAAC 60.153 63.158 0.00 0.00 0.00 3.95
3495 3541 1.223763 GGAAGGGGGTCATCGAACC 59.776 63.158 0.00 0.00 39.01 3.62
3506 3552 2.892640 TCGAACCCCGAGCATGAG 59.107 61.111 0.00 0.00 43.23 2.90
3507 3553 2.892425 CGAACCCCGAGCATGAGC 60.892 66.667 0.00 0.00 41.76 4.26
3508 3554 2.514824 GAACCCCGAGCATGAGCC 60.515 66.667 0.00 0.00 43.56 4.70
3509 3555 3.329542 GAACCCCGAGCATGAGCCA 62.330 63.158 0.00 0.00 43.56 4.75
3510 3556 2.615227 GAACCCCGAGCATGAGCCAT 62.615 60.000 0.00 0.00 43.56 4.40
3511 3557 2.194056 CCCCGAGCATGAGCCATT 59.806 61.111 0.00 0.00 43.56 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.948623 CTTGGTGCGACGGTGATGAA 60.949 55.000 0.00 0.00 0.00 2.57
1 2 1.374125 CTTGGTGCGACGGTGATGA 60.374 57.895 0.00 0.00 0.00 2.92
2 3 3.027170 GCTTGGTGCGACGGTGATG 62.027 63.158 0.00 0.00 0.00 3.07
3 4 2.742372 GCTTGGTGCGACGGTGAT 60.742 61.111 0.00 0.00 0.00 3.06
4 5 4.228567 TGCTTGGTGCGACGGTGA 62.229 61.111 0.00 0.00 46.63 4.02
5 6 4.012895 GTGCTTGGTGCGACGGTG 62.013 66.667 0.00 0.00 46.63 4.94
6 7 3.825160 ATGTGCTTGGTGCGACGGT 62.825 57.895 0.00 0.00 46.63 4.83
7 8 2.616330 AATGTGCTTGGTGCGACGG 61.616 57.895 0.00 0.00 46.63 4.79
8 9 1.440850 CAATGTGCTTGGTGCGACG 60.441 57.895 0.00 0.00 46.63 5.12
9 10 0.110056 CTCAATGTGCTTGGTGCGAC 60.110 55.000 0.00 0.00 46.63 5.19
10 11 1.855213 GCTCAATGTGCTTGGTGCGA 61.855 55.000 0.00 0.00 46.63 5.10
11 12 1.443194 GCTCAATGTGCTTGGTGCG 60.443 57.895 0.00 0.00 46.63 5.34
12 13 1.962144 AGCTCAATGTGCTTGGTGC 59.038 52.632 3.73 0.00 37.52 5.01
18 19 4.160642 TGGATATCAAGCTCAATGTGCT 57.839 40.909 3.73 3.73 43.32 4.40
19 20 5.449107 AATGGATATCAAGCTCAATGTGC 57.551 39.130 4.83 0.00 0.00 4.57
20 21 7.262772 ACAAAATGGATATCAAGCTCAATGTG 58.737 34.615 4.83 0.00 0.00 3.21
21 22 7.414222 ACAAAATGGATATCAAGCTCAATGT 57.586 32.000 4.83 0.00 0.00 2.71
22 23 7.166970 CGAACAAAATGGATATCAAGCTCAATG 59.833 37.037 4.83 0.00 0.00 2.82
23 24 7.198390 CGAACAAAATGGATATCAAGCTCAAT 58.802 34.615 4.83 0.00 0.00 2.57
24 25 6.404623 CCGAACAAAATGGATATCAAGCTCAA 60.405 38.462 4.83 0.00 0.00 3.02
25 26 5.066375 CCGAACAAAATGGATATCAAGCTCA 59.934 40.000 4.83 0.00 0.00 4.26
26 27 5.506317 CCCGAACAAAATGGATATCAAGCTC 60.506 44.000 4.83 0.00 0.00 4.09
27 28 4.339247 CCCGAACAAAATGGATATCAAGCT 59.661 41.667 4.83 0.00 0.00 3.74
28 29 4.338118 TCCCGAACAAAATGGATATCAAGC 59.662 41.667 4.83 0.00 0.00 4.01
29 30 6.262944 TGATCCCGAACAAAATGGATATCAAG 59.737 38.462 4.83 0.00 37.72 3.02
30 31 6.125719 TGATCCCGAACAAAATGGATATCAA 58.874 36.000 4.83 0.00 37.72 2.57
31 32 5.689835 TGATCCCGAACAAAATGGATATCA 58.310 37.500 4.83 0.00 37.72 2.15
32 33 5.182001 CCTGATCCCGAACAAAATGGATATC 59.818 44.000 0.00 0.00 37.72 1.63
33 34 5.072741 CCTGATCCCGAACAAAATGGATAT 58.927 41.667 0.00 0.00 37.72 1.63
34 35 4.080015 ACCTGATCCCGAACAAAATGGATA 60.080 41.667 0.00 0.00 37.72 2.59
35 36 3.290710 CCTGATCCCGAACAAAATGGAT 58.709 45.455 0.00 0.00 40.27 3.41
36 37 2.041081 ACCTGATCCCGAACAAAATGGA 59.959 45.455 0.00 0.00 0.00 3.41
37 38 2.164219 CACCTGATCCCGAACAAAATGG 59.836 50.000 0.00 0.00 0.00 3.16
38 39 2.164219 CCACCTGATCCCGAACAAAATG 59.836 50.000 0.00 0.00 0.00 2.32
39 40 2.446435 CCACCTGATCCCGAACAAAAT 58.554 47.619 0.00 0.00 0.00 1.82
40 41 1.904287 CCACCTGATCCCGAACAAAA 58.096 50.000 0.00 0.00 0.00 2.44
41 42 0.608035 GCCACCTGATCCCGAACAAA 60.608 55.000 0.00 0.00 0.00 2.83
42 43 1.002624 GCCACCTGATCCCGAACAA 60.003 57.895 0.00 0.00 0.00 2.83
43 44 1.899437 GAGCCACCTGATCCCGAACA 61.899 60.000 0.00 0.00 0.00 3.18
44 45 1.153349 GAGCCACCTGATCCCGAAC 60.153 63.158 0.00 0.00 0.00 3.95
45 46 0.909610 AAGAGCCACCTGATCCCGAA 60.910 55.000 0.00 0.00 0.00 4.30
46 47 1.306141 AAGAGCCACCTGATCCCGA 60.306 57.895 0.00 0.00 0.00 5.14
47 48 1.153289 CAAGAGCCACCTGATCCCG 60.153 63.158 0.00 0.00 0.00 5.14
48 49 1.225704 CCAAGAGCCACCTGATCCC 59.774 63.158 0.00 0.00 0.00 3.85
49 50 1.452833 GCCAAGAGCCACCTGATCC 60.453 63.158 0.00 0.00 34.35 3.36
50 51 4.232310 GCCAAGAGCCACCTGATC 57.768 61.111 0.00 0.00 34.35 2.92
59 60 2.665185 ACGAACGTGGCCAAGAGC 60.665 61.111 26.25 14.57 42.60 4.09
60 61 3.244105 CACGAACGTGGCCAAGAG 58.756 61.111 26.25 17.02 42.00 2.85
75 76 1.647084 GTGGGAACGTGCAGAACAC 59.353 57.895 0.00 0.00 46.45 3.32
76 77 1.525077 GGTGGGAACGTGCAGAACA 60.525 57.895 0.00 0.00 0.00 3.18
77 78 1.227853 AGGTGGGAACGTGCAGAAC 60.228 57.895 0.00 0.00 0.00 3.01
78 79 1.070786 GAGGTGGGAACGTGCAGAA 59.929 57.895 0.00 0.00 0.00 3.02
79 80 2.741092 GAGGTGGGAACGTGCAGA 59.259 61.111 0.00 0.00 0.00 4.26
80 81 2.358737 GGAGGTGGGAACGTGCAG 60.359 66.667 0.00 0.00 0.00 4.41
81 82 3.948719 GGGAGGTGGGAACGTGCA 61.949 66.667 0.00 0.00 0.00 4.57
82 83 3.485346 TTGGGAGGTGGGAACGTGC 62.485 63.158 0.00 0.00 0.00 5.34
83 84 1.599797 GTTGGGAGGTGGGAACGTG 60.600 63.158 0.00 0.00 0.00 4.49
84 85 1.637724 TTGTTGGGAGGTGGGAACGT 61.638 55.000 0.00 0.00 0.00 3.99
85 86 0.251165 ATTGTTGGGAGGTGGGAACG 60.251 55.000 0.00 0.00 0.00 3.95
86 87 2.009681 AATTGTTGGGAGGTGGGAAC 57.990 50.000 0.00 0.00 0.00 3.62
87 88 2.785357 AAATTGTTGGGAGGTGGGAA 57.215 45.000 0.00 0.00 0.00 3.97
88 89 2.225167 GGTAAATTGTTGGGAGGTGGGA 60.225 50.000 0.00 0.00 0.00 4.37
89 90 2.176045 GGTAAATTGTTGGGAGGTGGG 58.824 52.381 0.00 0.00 0.00 4.61
90 91 1.816224 CGGTAAATTGTTGGGAGGTGG 59.184 52.381 0.00 0.00 0.00 4.61
91 92 2.486592 GTCGGTAAATTGTTGGGAGGTG 59.513 50.000 0.00 0.00 0.00 4.00
92 93 2.106857 TGTCGGTAAATTGTTGGGAGGT 59.893 45.455 0.00 0.00 0.00 3.85
93 94 2.785562 TGTCGGTAAATTGTTGGGAGG 58.214 47.619 0.00 0.00 0.00 4.30
94 95 4.006989 TGATGTCGGTAAATTGTTGGGAG 58.993 43.478 0.00 0.00 0.00 4.30
95 96 4.022413 TGATGTCGGTAAATTGTTGGGA 57.978 40.909 0.00 0.00 0.00 4.37
96 97 4.397730 TCATGATGTCGGTAAATTGTTGGG 59.602 41.667 0.00 0.00 0.00 4.12
97 98 5.331902 GTCATGATGTCGGTAAATTGTTGG 58.668 41.667 0.00 0.00 0.00 3.77
98 99 5.106357 TGGTCATGATGTCGGTAAATTGTTG 60.106 40.000 0.00 0.00 0.00 3.33
99 100 5.007034 TGGTCATGATGTCGGTAAATTGTT 58.993 37.500 0.00 0.00 0.00 2.83
100 101 4.584874 TGGTCATGATGTCGGTAAATTGT 58.415 39.130 0.00 0.00 0.00 2.71
101 102 5.559427 TTGGTCATGATGTCGGTAAATTG 57.441 39.130 0.00 0.00 0.00 2.32
102 103 5.125417 CCTTTGGTCATGATGTCGGTAAATT 59.875 40.000 0.00 0.00 0.00 1.82
103 104 4.640201 CCTTTGGTCATGATGTCGGTAAAT 59.360 41.667 0.00 0.00 0.00 1.40
104 105 4.006989 CCTTTGGTCATGATGTCGGTAAA 58.993 43.478 0.00 0.00 0.00 2.01
105 106 3.605634 CCTTTGGTCATGATGTCGGTAA 58.394 45.455 0.00 0.00 0.00 2.85
106 107 2.679639 GCCTTTGGTCATGATGTCGGTA 60.680 50.000 0.00 0.00 0.00 4.02
107 108 1.950484 GCCTTTGGTCATGATGTCGGT 60.950 52.381 0.00 0.00 0.00 4.69
108 109 0.734889 GCCTTTGGTCATGATGTCGG 59.265 55.000 0.00 0.00 0.00 4.79
109 110 1.742761 AGCCTTTGGTCATGATGTCG 58.257 50.000 0.00 0.00 0.00 4.35
110 111 2.416431 GCAAGCCTTTGGTCATGATGTC 60.416 50.000 0.00 0.00 34.79 3.06
111 112 1.547372 GCAAGCCTTTGGTCATGATGT 59.453 47.619 0.00 0.00 34.79 3.06
112 113 1.134907 GGCAAGCCTTTGGTCATGATG 60.135 52.381 3.29 0.00 34.79 3.07
113 114 1.188863 GGCAAGCCTTTGGTCATGAT 58.811 50.000 3.29 0.00 34.79 2.45
114 115 0.112995 AGGCAAGCCTTTGGTCATGA 59.887 50.000 8.02 0.00 45.70 3.07
115 116 1.474077 GTAGGCAAGCCTTTGGTCATG 59.526 52.381 20.09 0.00 45.70 3.07
116 117 1.839424 GTAGGCAAGCCTTTGGTCAT 58.161 50.000 20.09 0.00 45.70 3.06
117 118 0.605319 CGTAGGCAAGCCTTTGGTCA 60.605 55.000 20.09 0.00 45.70 4.02
118 119 0.321298 TCGTAGGCAAGCCTTTGGTC 60.321 55.000 20.09 4.69 45.70 4.02
119 120 0.605589 GTCGTAGGCAAGCCTTTGGT 60.606 55.000 20.09 0.00 45.70 3.67
120 121 1.635663 CGTCGTAGGCAAGCCTTTGG 61.636 60.000 20.09 8.95 45.70 3.28
121 122 0.949105 ACGTCGTAGGCAAGCCTTTG 60.949 55.000 20.09 12.02 45.70 2.77
122 123 0.669625 GACGTCGTAGGCAAGCCTTT 60.670 55.000 20.09 0.00 45.70 3.11
123 124 1.080025 GACGTCGTAGGCAAGCCTT 60.080 57.895 20.09 0.00 45.70 4.35
125 126 0.669625 AAAGACGTCGTAGGCAAGCC 60.670 55.000 10.46 2.02 0.00 4.35
126 127 0.714439 GAAAGACGTCGTAGGCAAGC 59.286 55.000 10.46 0.00 0.00 4.01
127 128 0.982673 CGAAAGACGTCGTAGGCAAG 59.017 55.000 10.46 0.00 36.26 4.01
128 129 0.592637 TCGAAAGACGTCGTAGGCAA 59.407 50.000 10.46 0.00 41.80 4.52
129 130 0.167470 CTCGAAAGACGTCGTAGGCA 59.833 55.000 10.46 0.00 41.80 4.75
130 131 0.522915 CCTCGAAAGACGTCGTAGGC 60.523 60.000 10.46 0.00 41.80 3.93
131 132 1.081892 TCCTCGAAAGACGTCGTAGG 58.918 55.000 10.46 10.96 41.80 3.18
132 133 2.888513 TTCCTCGAAAGACGTCGTAG 57.111 50.000 10.46 5.27 41.80 3.51
133 134 3.426695 GGAATTCCTCGAAAGACGTCGTA 60.427 47.826 17.73 0.00 41.80 3.43
134 135 2.593257 GAATTCCTCGAAAGACGTCGT 58.407 47.619 10.46 3.44 41.80 4.34
135 136 1.918609 GGAATTCCTCGAAAGACGTCG 59.081 52.381 17.73 0.00 43.13 5.12
136 137 1.918609 CGGAATTCCTCGAAAGACGTC 59.081 52.381 22.05 7.70 43.13 4.34
137 138 1.403780 CCGGAATTCCTCGAAAGACGT 60.404 52.381 22.05 0.00 43.13 4.34
138 139 1.278238 CCGGAATTCCTCGAAAGACG 58.722 55.000 22.05 5.54 44.09 4.18
139 140 2.269172 GACCGGAATTCCTCGAAAGAC 58.731 52.381 22.05 2.02 35.39 3.01
140 141 1.206371 GGACCGGAATTCCTCGAAAGA 59.794 52.381 22.05 0.00 39.12 2.52
141 142 1.066430 TGGACCGGAATTCCTCGAAAG 60.066 52.381 22.05 5.43 33.84 2.62
142 143 0.978151 TGGACCGGAATTCCTCGAAA 59.022 50.000 22.05 2.64 33.84 3.46
143 144 0.535335 CTGGACCGGAATTCCTCGAA 59.465 55.000 22.05 5.47 33.84 3.71
144 145 2.199117 CTGGACCGGAATTCCTCGA 58.801 57.895 22.05 10.14 33.84 4.04
145 146 4.835927 CTGGACCGGAATTCCTCG 57.164 61.111 22.05 13.94 33.84 4.63
617 618 1.066143 CACGTGCCCTTATTCTGTCCT 60.066 52.381 0.82 0.00 0.00 3.85
618 619 1.338769 ACACGTGCCCTTATTCTGTCC 60.339 52.381 17.22 0.00 0.00 4.02
619 620 1.732259 CACACGTGCCCTTATTCTGTC 59.268 52.381 17.22 0.00 0.00 3.51
620 621 1.610624 CCACACGTGCCCTTATTCTGT 60.611 52.381 17.22 0.00 0.00 3.41
621 622 1.086696 CCACACGTGCCCTTATTCTG 58.913 55.000 17.22 2.52 0.00 3.02
622 623 0.676782 GCCACACGTGCCCTTATTCT 60.677 55.000 17.22 0.00 0.00 2.40
623 624 0.676782 AGCCACACGTGCCCTTATTC 60.677 55.000 17.22 0.00 0.00 1.75
624 625 0.676782 GAGCCACACGTGCCCTTATT 60.677 55.000 17.22 0.00 0.00 1.40
625 626 1.078426 GAGCCACACGTGCCCTTAT 60.078 57.895 17.22 0.00 0.00 1.73
626 627 2.345991 GAGCCACACGTGCCCTTA 59.654 61.111 17.22 0.00 0.00 2.69
627 628 4.988598 CGAGCCACACGTGCCCTT 62.989 66.667 17.22 0.00 0.00 3.95
631 632 4.152625 GATGCGAGCCACACGTGC 62.153 66.667 17.22 0.86 0.00 5.34
632 633 3.490759 GGATGCGAGCCACACGTG 61.491 66.667 15.48 15.48 0.00 4.49
656 657 1.883725 GAGTTTGCGGTCGAACGGAC 61.884 60.000 26.23 11.21 45.31 4.79
657 658 1.662446 GAGTTTGCGGTCGAACGGA 60.662 57.895 26.23 21.07 40.68 4.69
658 659 2.851104 GAGTTTGCGGTCGAACGG 59.149 61.111 26.23 6.46 40.68 4.44
659 660 2.464189 CGAGTTTGCGGTCGAACG 59.536 61.111 20.73 20.73 40.68 3.95
660 661 2.851104 CCGAGTTTGCGGTCGAAC 59.149 61.111 0.00 0.00 46.07 3.95
667 668 2.415697 AATTTTGGACCGAGTTTGCG 57.584 45.000 0.00 0.00 0.00 4.85
668 669 4.446385 GGTTTAATTTTGGACCGAGTTTGC 59.554 41.667 0.00 0.00 0.00 3.68
676 677 6.127281 ACCCATTATCGGTTTAATTTTGGACC 60.127 38.462 0.00 0.00 0.00 4.46
677 678 6.869695 ACCCATTATCGGTTTAATTTTGGAC 58.130 36.000 0.00 0.00 0.00 4.02
678 679 7.178628 TCAACCCATTATCGGTTTAATTTTGGA 59.821 33.333 0.00 0.00 41.78 3.53
679 680 7.324178 TCAACCCATTATCGGTTTAATTTTGG 58.676 34.615 0.00 0.00 41.78 3.28
680 681 8.764524 TTCAACCCATTATCGGTTTAATTTTG 57.235 30.769 0.00 0.00 41.78 2.44
681 682 9.430623 CTTTCAACCCATTATCGGTTTAATTTT 57.569 29.630 0.00 0.00 41.78 1.82
682 683 7.547722 GCTTTCAACCCATTATCGGTTTAATTT 59.452 33.333 0.00 0.00 41.78 1.82
683 684 7.039270 GCTTTCAACCCATTATCGGTTTAATT 58.961 34.615 0.00 0.00 41.78 1.40
684 685 6.569780 GCTTTCAACCCATTATCGGTTTAAT 58.430 36.000 0.00 0.00 41.78 1.40
685 686 5.392165 CGCTTTCAACCCATTATCGGTTTAA 60.392 40.000 0.00 0.00 41.78 1.52
686 687 4.095185 CGCTTTCAACCCATTATCGGTTTA 59.905 41.667 0.00 0.00 41.78 2.01
687 688 3.119637 CGCTTTCAACCCATTATCGGTTT 60.120 43.478 0.00 0.00 41.78 3.27
688 689 2.422127 CGCTTTCAACCCATTATCGGTT 59.578 45.455 0.00 0.00 44.60 4.44
689 690 2.014128 CGCTTTCAACCCATTATCGGT 58.986 47.619 0.00 0.00 34.07 4.69
690 691 1.333619 CCGCTTTCAACCCATTATCGG 59.666 52.381 0.00 0.00 0.00 4.18
691 692 2.285083 TCCGCTTTCAACCCATTATCG 58.715 47.619 0.00 0.00 0.00 2.92
692 693 6.385649 TTTATCCGCTTTCAACCCATTATC 57.614 37.500 0.00 0.00 0.00 1.75
693 694 6.783708 TTTTATCCGCTTTCAACCCATTAT 57.216 33.333 0.00 0.00 0.00 1.28
694 695 6.591750 TTTTTATCCGCTTTCAACCCATTA 57.408 33.333 0.00 0.00 0.00 1.90
695 696 5.476091 TTTTTATCCGCTTTCAACCCATT 57.524 34.783 0.00 0.00 0.00 3.16
733 734 4.764336 CCAACGCGCGGTCGTAGA 62.764 66.667 35.22 0.00 42.46 2.59
734 735 4.764336 TCCAACGCGCGGTCGTAG 62.764 66.667 35.22 15.96 42.46 3.51
735 736 4.118995 ATCCAACGCGCGGTCGTA 62.119 61.111 35.22 15.62 42.46 3.43
741 742 4.817063 CAAGCCATCCAACGCGCG 62.817 66.667 30.96 30.96 0.00 6.86
742 743 2.747507 AAACAAGCCATCCAACGCGC 62.748 55.000 5.73 0.00 0.00 6.86
743 744 0.318614 AAAACAAGCCATCCAACGCG 60.319 50.000 3.53 3.53 0.00 6.01
744 745 1.139163 CAAAACAAGCCATCCAACGC 58.861 50.000 0.00 0.00 0.00 4.84
745 746 2.393764 GACAAAACAAGCCATCCAACG 58.606 47.619 0.00 0.00 0.00 4.10
746 747 2.754472 GGACAAAACAAGCCATCCAAC 58.246 47.619 0.00 0.00 0.00 3.77
747 748 1.339610 CGGACAAAACAAGCCATCCAA 59.660 47.619 0.00 0.00 0.00 3.53
748 749 0.958091 CGGACAAAACAAGCCATCCA 59.042 50.000 0.00 0.00 0.00 3.41
749 750 0.958822 ACGGACAAAACAAGCCATCC 59.041 50.000 0.00 0.00 0.00 3.51
750 751 2.793278 AACGGACAAAACAAGCCATC 57.207 45.000 0.00 0.00 0.00 3.51
751 752 3.243602 GGTAAACGGACAAAACAAGCCAT 60.244 43.478 0.00 0.00 0.00 4.40
752 753 2.099427 GGTAAACGGACAAAACAAGCCA 59.901 45.455 0.00 0.00 0.00 4.75
753 754 2.544277 GGGTAAACGGACAAAACAAGCC 60.544 50.000 0.00 0.00 0.00 4.35
754 755 2.099427 TGGGTAAACGGACAAAACAAGC 59.901 45.455 0.00 0.00 0.00 4.01
755 756 4.373348 TTGGGTAAACGGACAAAACAAG 57.627 40.909 0.00 0.00 0.00 3.16
756 757 4.492611 GTTTGGGTAAACGGACAAAACAA 58.507 39.130 0.00 0.00 37.08 2.83
757 758 4.107363 GTTTGGGTAAACGGACAAAACA 57.893 40.909 0.00 0.00 37.08 2.83
767 768 0.587768 CCGTGTCCGTTTGGGTAAAC 59.412 55.000 0.00 0.00 42.14 2.01
768 769 0.467384 TCCGTGTCCGTTTGGGTAAA 59.533 50.000 0.00 0.00 37.00 2.01
769 770 0.249826 GTCCGTGTCCGTTTGGGTAA 60.250 55.000 0.00 0.00 37.00 2.85
770 771 1.367102 GTCCGTGTCCGTTTGGGTA 59.633 57.895 0.00 0.00 37.00 3.69
771 772 2.109593 GTCCGTGTCCGTTTGGGT 59.890 61.111 0.00 0.00 37.00 4.51
772 773 3.039588 CGTCCGTGTCCGTTTGGG 61.040 66.667 0.00 0.00 35.24 4.12
773 774 2.027897 TCGTCCGTGTCCGTTTGG 59.972 61.111 0.00 0.00 0.00 3.28
774 775 2.305127 GGTCGTCCGTGTCCGTTTG 61.305 63.158 0.00 0.00 0.00 2.93
775 776 2.028043 GGTCGTCCGTGTCCGTTT 59.972 61.111 0.00 0.00 0.00 3.60
776 777 2.091102 AATGGTCGTCCGTGTCCGTT 62.091 55.000 0.00 0.00 36.30 4.44
777 778 2.482296 GAATGGTCGTCCGTGTCCGT 62.482 60.000 0.00 0.00 36.30 4.69
778 779 1.804326 GAATGGTCGTCCGTGTCCG 60.804 63.158 0.00 0.00 36.30 4.79
779 780 1.804326 CGAATGGTCGTCCGTGTCC 60.804 63.158 0.00 0.00 42.53 4.02
780 781 1.804326 CCGAATGGTCGTCCGTGTC 60.804 63.158 0.00 0.00 46.21 3.67
781 782 2.260434 CCGAATGGTCGTCCGTGT 59.740 61.111 0.00 0.00 46.21 4.49
791 792 1.009903 TAACGCACGACACCGAATGG 61.010 55.000 0.00 0.00 42.84 3.16
792 793 0.365523 CTAACGCACGACACCGAATG 59.634 55.000 0.00 0.00 39.50 2.67
793 794 0.038892 ACTAACGCACGACACCGAAT 60.039 50.000 0.00 0.00 39.50 3.34
794 795 0.935831 CACTAACGCACGACACCGAA 60.936 55.000 0.00 0.00 39.50 4.30
795 796 1.370778 CACTAACGCACGACACCGA 60.371 57.895 0.00 0.00 39.50 4.69
796 797 2.369629 CCACTAACGCACGACACCG 61.370 63.158 0.00 0.00 42.50 4.94
797 798 1.300388 ACCACTAACGCACGACACC 60.300 57.895 0.00 0.00 0.00 4.16
798 799 1.850640 CACCACTAACGCACGACAC 59.149 57.895 0.00 0.00 0.00 3.67
799 800 1.952133 GCACCACTAACGCACGACA 60.952 57.895 0.00 0.00 0.00 4.35
800 801 2.851104 GCACCACTAACGCACGAC 59.149 61.111 0.00 0.00 0.00 4.34
801 802 2.731721 CGCACCACTAACGCACGA 60.732 61.111 0.00 0.00 0.00 4.35
802 803 1.276820 TAACGCACCACTAACGCACG 61.277 55.000 0.00 0.00 0.00 5.34
803 804 0.437295 CTAACGCACCACTAACGCAC 59.563 55.000 0.00 0.00 0.00 5.34
804 805 0.032403 ACTAACGCACCACTAACGCA 59.968 50.000 0.00 0.00 0.00 5.24
805 806 0.712222 GACTAACGCACCACTAACGC 59.288 55.000 0.00 0.00 0.00 4.84
806 807 0.979811 CGACTAACGCACCACTAACG 59.020 55.000 0.00 0.00 34.51 3.18
807 808 1.343506 CCGACTAACGCACCACTAAC 58.656 55.000 0.00 0.00 41.07 2.34
808 809 0.388907 GCCGACTAACGCACCACTAA 60.389 55.000 0.00 0.00 41.07 2.24
809 810 1.213537 GCCGACTAACGCACCACTA 59.786 57.895 0.00 0.00 41.07 2.74
810 811 2.048503 GCCGACTAACGCACCACT 60.049 61.111 0.00 0.00 41.07 4.00
811 812 3.116531 GGCCGACTAACGCACCAC 61.117 66.667 0.00 0.00 41.07 4.16
812 813 4.728102 CGGCCGACTAACGCACCA 62.728 66.667 24.07 0.00 41.07 4.17
817 818 4.124351 TCAGGCGGCCGACTAACG 62.124 66.667 37.66 23.12 42.18 3.18
818 819 2.202756 CTCAGGCGGCCGACTAAC 60.203 66.667 37.66 13.01 0.00 2.34
851 852 4.122776 AGCATATCAACTTTGGCTAGACG 58.877 43.478 0.00 0.00 0.00 4.18
862 865 3.525537 CTGGTGACGAAGCATATCAACT 58.474 45.455 0.00 0.00 35.27 3.16
974 977 3.124560 GGTAATAACTGGAGCGAGCTTC 58.875 50.000 0.00 0.00 0.00 3.86
980 983 0.179094 TGGCGGTAATAACTGGAGCG 60.179 55.000 0.00 0.00 37.16 5.03
985 988 2.290641 GCTCCATTGGCGGTAATAACTG 59.709 50.000 0.00 0.00 34.87 3.16
1027 1030 2.420890 CTGGCTCTCCTCATCCGC 59.579 66.667 0.00 0.00 0.00 5.54
1732 1747 2.542896 GTCGAACGTGTTGGCGAC 59.457 61.111 10.03 10.03 44.83 5.19
2497 2524 2.613691 ACAATTTCAGGTACTACCGCG 58.386 47.619 0.00 0.00 44.90 6.46
2536 2563 5.287035 CACGACAGTAACTAATAACCGGAAC 59.713 44.000 9.46 0.00 0.00 3.62
2557 2584 1.071502 CGCGGCATTAATACACTCACG 60.072 52.381 0.00 0.00 0.00 4.35
2567 2594 0.468226 AGAATCTCCCGCGGCATTAA 59.532 50.000 22.85 2.62 0.00 1.40
2568 2595 0.249868 CAGAATCTCCCGCGGCATTA 60.250 55.000 22.85 4.69 0.00 1.90
2569 2596 1.524621 CAGAATCTCCCGCGGCATT 60.525 57.895 22.85 17.04 0.00 3.56
2585 2612 0.982852 TCCATGGGCAGGGTAGTCAG 60.983 60.000 13.02 0.00 33.26 3.51
2591 2618 0.328450 TATCCTTCCATGGGCAGGGT 60.328 55.000 23.70 20.95 33.26 4.34
2619 2646 3.565482 TCAATCACTTCGCTTCAGCTTTT 59.435 39.130 0.00 0.00 39.32 2.27
2699 2730 1.550524 GCATCTCCATACATCGCCCTA 59.449 52.381 0.00 0.00 0.00 3.53
2779 2814 2.017049 GTACGGCTGCATTTCCAATCT 58.983 47.619 0.50 0.00 0.00 2.40
2783 2818 1.539388 CAAAGTACGGCTGCATTTCCA 59.461 47.619 0.50 0.00 0.00 3.53
2817 2853 2.864343 CGGATGACACGATTAAGAACCC 59.136 50.000 0.00 0.00 0.00 4.11
2829 2865 2.061773 CATTCTATCGCCGGATGACAC 58.938 52.381 5.05 0.00 34.00 3.67
2840 2876 6.571520 GCATTAGAAAAAGCGACATTCTATCG 59.428 38.462 0.00 0.00 42.55 2.92
2848 2884 4.455533 AGATGTGCATTAGAAAAAGCGACA 59.544 37.500 0.00 0.00 31.96 4.35
2882 2918 7.578310 ACGGCTACTTAGATGACAATACTTA 57.422 36.000 0.00 0.00 0.00 2.24
2883 2919 6.466885 ACGGCTACTTAGATGACAATACTT 57.533 37.500 0.00 0.00 0.00 2.24
2884 2920 6.544931 TGTACGGCTACTTAGATGACAATACT 59.455 38.462 0.00 0.00 0.00 2.12
2885 2921 6.636044 GTGTACGGCTACTTAGATGACAATAC 59.364 42.308 0.00 0.00 0.00 1.89
2888 2924 4.703575 AGTGTACGGCTACTTAGATGACAA 59.296 41.667 0.00 0.00 0.00 3.18
2889 2925 4.267536 AGTGTACGGCTACTTAGATGACA 58.732 43.478 0.00 0.00 0.00 3.58
2890 2926 4.897025 AGTGTACGGCTACTTAGATGAC 57.103 45.455 0.00 0.00 0.00 3.06
2891 2927 5.909621 AAAGTGTACGGCTACTTAGATGA 57.090 39.130 0.00 0.00 36.19 2.92
2892 2928 7.220300 CACTTAAAGTGTACGGCTACTTAGATG 59.780 40.741 0.00 0.00 41.19 2.90
2893 2929 7.256286 CACTTAAAGTGTACGGCTACTTAGAT 58.744 38.462 0.00 0.00 41.19 1.98
2894 2930 6.349611 CCACTTAAAGTGTACGGCTACTTAGA 60.350 42.308 0.00 0.00 44.50 2.10
2895 2931 5.803967 CCACTTAAAGTGTACGGCTACTTAG 59.196 44.000 0.00 0.00 44.50 2.18
2896 2932 5.476599 TCCACTTAAAGTGTACGGCTACTTA 59.523 40.000 0.00 0.00 44.50 2.24
2897 2933 4.281688 TCCACTTAAAGTGTACGGCTACTT 59.718 41.667 0.00 0.00 44.50 2.24
2898 2934 3.828451 TCCACTTAAAGTGTACGGCTACT 59.172 43.478 0.00 0.00 44.50 2.57
2899 2935 4.171754 CTCCACTTAAAGTGTACGGCTAC 58.828 47.826 0.00 0.00 44.50 3.58
2900 2936 3.367703 GCTCCACTTAAAGTGTACGGCTA 60.368 47.826 0.00 0.00 44.50 3.93
2907 2943 5.482908 CTGTAGATGCTCCACTTAAAGTGT 58.517 41.667 0.00 0.00 44.50 3.55
2913 2949 3.679917 GCTTGCTGTAGATGCTCCACTTA 60.680 47.826 0.00 0.00 0.00 2.24
2946 2992 3.303990 GGTCGTTTACGCGGACATATAGA 60.304 47.826 12.47 0.00 39.60 1.98
2947 2993 2.975851 GGTCGTTTACGCGGACATATAG 59.024 50.000 12.47 0.00 39.60 1.31
2952 2998 2.428902 CGGTCGTTTACGCGGACA 60.429 61.111 12.47 0.00 39.60 4.02
2960 3006 1.297664 CAAACACACCCGGTCGTTTA 58.702 50.000 12.32 0.00 32.91 2.01
2962 3008 1.820481 CCAAACACACCCGGTCGTT 60.820 57.895 0.00 0.00 0.00 3.85
2965 3011 1.731093 CAACCAAACACACCCGGTC 59.269 57.895 0.00 0.00 0.00 4.79
2968 3014 0.108615 TTTGCAACCAAACACACCCG 60.109 50.000 0.00 0.00 36.09 5.28
2971 3017 2.094234 AGTCCTTTGCAACCAAACACAC 60.094 45.455 0.00 0.00 36.09 3.82
2974 3020 2.451490 TCAGTCCTTTGCAACCAAACA 58.549 42.857 0.00 0.00 36.09 2.83
2977 3023 2.733956 AGTTCAGTCCTTTGCAACCAA 58.266 42.857 0.00 0.00 0.00 3.67
2999 3045 7.439108 TTTCTTTAATCCCTTGGACCAAAAA 57.561 32.000 8.59 4.04 32.98 1.94
3000 3046 7.439108 TTTTCTTTAATCCCTTGGACCAAAA 57.561 32.000 8.59 0.00 32.98 2.44
3042 3088 6.089502 AGGGACTCTTAAGGGACTAGAAAAA 58.910 40.000 9.99 0.00 38.49 1.94
3043 3089 5.662597 AGGGACTCTTAAGGGACTAGAAAA 58.337 41.667 9.99 0.00 38.49 2.29
3044 3090 5.286760 AGGGACTCTTAAGGGACTAGAAA 57.713 43.478 9.99 0.00 38.49 2.52
3045 3091 4.969136 AGGGACTCTTAAGGGACTAGAA 57.031 45.455 9.99 0.00 38.49 2.10
3060 3106 4.462730 TGTGTAACCAAACAGGAGGGACT 61.463 47.826 0.00 0.00 41.22 3.85
3061 3107 2.158726 TGTGTAACCAAACAGGAGGGAC 60.159 50.000 0.00 0.00 41.22 4.46
3062 3108 2.105821 CTGTGTAACCAAACAGGAGGGA 59.894 50.000 0.00 0.00 40.12 4.20
3063 3109 2.158667 ACTGTGTAACCAAACAGGAGGG 60.159 50.000 7.63 0.00 46.55 4.30
3064 3110 2.878406 CACTGTGTAACCAAACAGGAGG 59.122 50.000 7.63 0.00 46.55 4.30
3065 3111 3.804036 TCACTGTGTAACCAAACAGGAG 58.196 45.455 7.79 0.63 46.55 3.69
3066 3112 3.916359 TCACTGTGTAACCAAACAGGA 57.084 42.857 7.79 0.19 46.55 3.86
3067 3113 6.627395 TTAATCACTGTGTAACCAAACAGG 57.373 37.500 7.79 0.00 46.55 4.00
3097 3143 9.310449 TGGTTACAGAGACTAGACTAGAAAAAT 57.690 33.333 16.55 0.00 0.00 1.82
3098 3144 8.701908 TGGTTACAGAGACTAGACTAGAAAAA 57.298 34.615 16.55 0.00 0.00 1.94
3099 3145 8.701908 TTGGTTACAGAGACTAGACTAGAAAA 57.298 34.615 16.55 0.00 0.00 2.29
3100 3146 8.574737 GTTTGGTTACAGAGACTAGACTAGAAA 58.425 37.037 16.55 0.00 0.00 2.52
3101 3147 7.722728 TGTTTGGTTACAGAGACTAGACTAGAA 59.277 37.037 16.55 0.00 0.00 2.10
3102 3148 7.229308 TGTTTGGTTACAGAGACTAGACTAGA 58.771 38.462 16.55 0.00 0.00 2.43
3103 3149 7.362229 CCTGTTTGGTTACAGAGACTAGACTAG 60.362 44.444 8.00 8.00 46.72 2.57
3104 3150 6.433404 CCTGTTTGGTTACAGAGACTAGACTA 59.567 42.308 0.00 0.00 46.72 2.59
3105 3151 5.244178 CCTGTTTGGTTACAGAGACTAGACT 59.756 44.000 0.00 0.00 46.72 3.24
3106 3152 5.471257 CCTGTTTGGTTACAGAGACTAGAC 58.529 45.833 0.00 0.00 46.72 2.59
3107 3153 4.527038 CCCTGTTTGGTTACAGAGACTAGA 59.473 45.833 0.00 0.00 46.72 2.43
3108 3154 4.822026 CCCTGTTTGGTTACAGAGACTAG 58.178 47.826 5.39 0.00 46.72 2.57
3109 3155 3.007614 GCCCTGTTTGGTTACAGAGACTA 59.992 47.826 5.39 0.00 46.72 2.59
3110 3156 2.224548 GCCCTGTTTGGTTACAGAGACT 60.225 50.000 5.39 0.00 46.72 3.24
3111 3157 2.152016 GCCCTGTTTGGTTACAGAGAC 58.848 52.381 5.39 0.00 46.72 3.36
3112 3158 1.771854 TGCCCTGTTTGGTTACAGAGA 59.228 47.619 5.39 0.00 46.72 3.10
3113 3159 2.270352 TGCCCTGTTTGGTTACAGAG 57.730 50.000 5.39 0.00 46.72 3.35
3114 3160 2.107378 TGATGCCCTGTTTGGTTACAGA 59.893 45.455 5.39 0.00 46.72 3.41
3115 3161 2.513753 TGATGCCCTGTTTGGTTACAG 58.486 47.619 0.00 0.00 44.07 2.74
3116 3162 2.666272 TGATGCCCTGTTTGGTTACA 57.334 45.000 0.00 0.00 0.00 2.41
3117 3163 3.068873 TGTTTGATGCCCTGTTTGGTTAC 59.931 43.478 0.00 0.00 0.00 2.50
3118 3164 3.068873 GTGTTTGATGCCCTGTTTGGTTA 59.931 43.478 0.00 0.00 0.00 2.85
3119 3165 2.114616 TGTTTGATGCCCTGTTTGGTT 58.885 42.857 0.00 0.00 0.00 3.67
3120 3166 1.412343 GTGTTTGATGCCCTGTTTGGT 59.588 47.619 0.00 0.00 0.00 3.67
3121 3167 1.688197 AGTGTTTGATGCCCTGTTTGG 59.312 47.619 0.00 0.00 0.00 3.28
3122 3168 2.361757 TGAGTGTTTGATGCCCTGTTTG 59.638 45.455 0.00 0.00 0.00 2.93
3123 3169 2.665165 TGAGTGTTTGATGCCCTGTTT 58.335 42.857 0.00 0.00 0.00 2.83
3124 3170 2.363306 TGAGTGTTTGATGCCCTGTT 57.637 45.000 0.00 0.00 0.00 3.16
3125 3171 2.165167 CATGAGTGTTTGATGCCCTGT 58.835 47.619 0.00 0.00 0.00 4.00
3126 3172 2.163010 GTCATGAGTGTTTGATGCCCTG 59.837 50.000 0.00 0.00 0.00 4.45
3127 3173 2.440409 GTCATGAGTGTTTGATGCCCT 58.560 47.619 0.00 0.00 0.00 5.19
3128 3174 1.474077 GGTCATGAGTGTTTGATGCCC 59.526 52.381 0.00 0.00 0.00 5.36
3129 3175 1.131126 CGGTCATGAGTGTTTGATGCC 59.869 52.381 0.00 0.00 0.00 4.40
3130 3176 1.466360 GCGGTCATGAGTGTTTGATGC 60.466 52.381 0.00 0.00 0.00 3.91
3131 3177 1.805943 TGCGGTCATGAGTGTTTGATG 59.194 47.619 0.00 0.00 0.00 3.07
3132 3178 2.079158 CTGCGGTCATGAGTGTTTGAT 58.921 47.619 0.00 0.00 0.00 2.57
3133 3179 1.511850 CTGCGGTCATGAGTGTTTGA 58.488 50.000 0.00 0.00 0.00 2.69
3134 3180 0.110056 GCTGCGGTCATGAGTGTTTG 60.110 55.000 0.00 0.00 0.00 2.93
3135 3181 1.237285 GGCTGCGGTCATGAGTGTTT 61.237 55.000 0.00 0.00 0.00 2.83
3136 3182 1.672356 GGCTGCGGTCATGAGTGTT 60.672 57.895 0.00 0.00 0.00 3.32
3137 3183 2.046892 GGCTGCGGTCATGAGTGT 60.047 61.111 0.00 0.00 0.00 3.55
3138 3184 3.190849 CGGCTGCGGTCATGAGTG 61.191 66.667 0.00 0.00 0.00 3.51
3139 3185 3.695606 ACGGCTGCGGTCATGAGT 61.696 61.111 7.06 0.00 0.00 3.41
3140 3186 3.190849 CACGGCTGCGGTCATGAG 61.191 66.667 10.09 0.00 0.00 2.90
3154 3200 2.584492 TAGGTGACATGAGATGCACG 57.416 50.000 0.00 0.00 37.82 5.34
3160 3206 8.633561 CATAGTGTAGATTTAGGTGACATGAGA 58.366 37.037 0.00 0.00 0.00 3.27
3231 3277 7.595130 CCAGAATTTCGTTGATGATCTATACGA 59.405 37.037 11.73 11.73 39.21 3.43
3233 3279 8.818141 TCCAGAATTTCGTTGATGATCTATAC 57.182 34.615 0.00 0.00 0.00 1.47
3272 3318 2.167900 ACTACCGGCTTGTTCTATGTCC 59.832 50.000 0.00 0.00 0.00 4.02
3283 3329 4.839121 TGATGTGAATTAACTACCGGCTT 58.161 39.130 0.00 0.00 0.00 4.35
3321 3367 0.541392 TGCCGGCTGAACTATGATGT 59.459 50.000 29.70 0.00 0.00 3.06
3327 3373 0.326595 TCCATTTGCCGGCTGAACTA 59.673 50.000 29.70 1.94 0.00 2.24
3376 3422 3.129462 GGCCCTCTCTATCTTTGTTTTGC 59.871 47.826 0.00 0.00 0.00 3.68
3383 3429 1.218196 TCCTCGGCCCTCTCTATCTTT 59.782 52.381 0.00 0.00 0.00 2.52
3389 3435 0.325671 TGAATTCCTCGGCCCTCTCT 60.326 55.000 2.27 0.00 0.00 3.10
3401 3447 0.729690 GCGAGGAAGTGCTGAATTCC 59.270 55.000 2.27 0.00 44.49 3.01
3420 3466 1.659794 CACAAAGGCAAAGGACCGG 59.340 57.895 0.00 0.00 0.00 5.28
3433 3479 2.868839 GCTACAACCGCTCTACCACAAA 60.869 50.000 0.00 0.00 0.00 2.83
3436 3482 0.459759 GGCTACAACCGCTCTACCAC 60.460 60.000 0.00 0.00 0.00 4.16
3438 3484 1.143401 GGGCTACAACCGCTCTACC 59.857 63.158 0.00 0.00 0.00 3.18
3448 3494 1.134521 CGCCTACATGAAGGGCTACAA 60.135 52.381 19.61 0.00 43.29 2.41
3459 3505 1.695893 CCGCTGTTGACGCCTACATG 61.696 60.000 0.00 0.00 0.00 3.21
3460 3506 1.447838 CCGCTGTTGACGCCTACAT 60.448 57.895 0.00 0.00 0.00 2.29
3461 3507 2.048597 CCGCTGTTGACGCCTACA 60.049 61.111 0.00 0.00 0.00 2.74
3462 3508 1.352156 CTTCCGCTGTTGACGCCTAC 61.352 60.000 0.00 0.00 0.00 3.18
3463 3509 1.080093 CTTCCGCTGTTGACGCCTA 60.080 57.895 0.00 0.00 0.00 3.93
3464 3510 2.357517 CTTCCGCTGTTGACGCCT 60.358 61.111 0.00 0.00 0.00 5.52
3465 3511 3.423154 CCTTCCGCTGTTGACGCC 61.423 66.667 0.00 0.00 0.00 5.68
3466 3512 3.423154 CCCTTCCGCTGTTGACGC 61.423 66.667 0.00 0.00 0.00 5.19
3467 3513 2.742372 CCCCTTCCGCTGTTGACG 60.742 66.667 0.00 0.00 0.00 4.35
3468 3514 2.359975 CCCCCTTCCGCTGTTGAC 60.360 66.667 0.00 0.00 0.00 3.18
3469 3515 2.852075 ACCCCCTTCCGCTGTTGA 60.852 61.111 0.00 0.00 0.00 3.18
3470 3516 2.359975 GACCCCCTTCCGCTGTTG 60.360 66.667 0.00 0.00 0.00 3.33
3471 3517 2.198304 GATGACCCCCTTCCGCTGTT 62.198 60.000 0.00 0.00 0.00 3.16
3472 3518 2.610859 ATGACCCCCTTCCGCTGT 60.611 61.111 0.00 0.00 0.00 4.40
3473 3519 2.190578 GATGACCCCCTTCCGCTG 59.809 66.667 0.00 0.00 0.00 5.18
3474 3520 3.470888 CGATGACCCCCTTCCGCT 61.471 66.667 0.00 0.00 0.00 5.52
3475 3521 3.026431 TTCGATGACCCCCTTCCGC 62.026 63.158 0.00 0.00 0.00 5.54
3476 3522 1.153429 GTTCGATGACCCCCTTCCG 60.153 63.158 0.00 0.00 0.00 4.30
3477 3523 1.223763 GGTTCGATGACCCCCTTCC 59.776 63.158 0.00 0.00 33.41 3.46
3478 3524 4.957164 GGTTCGATGACCCCCTTC 57.043 61.111 0.00 0.00 33.41 3.46
3489 3535 2.892640 CTCATGCTCGGGGTTCGA 59.107 61.111 0.00 0.00 46.77 3.71
3490 3536 2.892425 GCTCATGCTCGGGGTTCG 60.892 66.667 0.00 0.00 40.90 3.95
3491 3537 2.514824 GGCTCATGCTCGGGGTTC 60.515 66.667 0.00 0.00 39.59 3.62
3492 3538 2.215451 AATGGCTCATGCTCGGGGTT 62.215 55.000 0.00 0.00 39.59 4.11
3493 3539 2.683465 AATGGCTCATGCTCGGGGT 61.683 57.895 0.00 0.00 39.59 4.95
3494 3540 2.194056 AATGGCTCATGCTCGGGG 59.806 61.111 0.00 0.00 39.59 5.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.