Multiple sequence alignment - TraesCS1A01G116900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G116900 chr1A 100.000 2853 0 0 1 2853 124182682 124179830 0.000000e+00 5269.0
1 TraesCS1A01G116900 chr1A 83.333 396 48 10 1085 1471 124787273 124786887 1.630000e-92 350.0
2 TraesCS1A01G116900 chr1D 89.911 1348 77 27 563 1884 114065682 114064368 0.000000e+00 1681.0
3 TraesCS1A01G116900 chr1D 80.702 399 59 10 1085 1471 114313702 114313310 7.730000e-76 294.0
4 TraesCS1A01G116900 chr1D 77.490 502 59 27 1060 1519 114083665 114083176 4.720000e-63 252.0
5 TraesCS1A01G116900 chr1D 87.135 171 16 1 2689 2853 114064252 114064082 3.750000e-44 189.0
6 TraesCS1A01G116900 chr1B 88.101 1143 67 28 753 1884 174763819 174762735 0.000000e+00 1293.0
7 TraesCS1A01G116900 chr1B 90.038 261 20 5 1 261 289118217 289118471 1.640000e-87 333.0
8 TraesCS1A01G116900 chr1B 80.046 436 55 18 1053 1471 175275907 175275487 7.730000e-76 294.0
9 TraesCS1A01G116900 chr1B 78.555 429 47 23 1060 1450 174784298 174783877 1.020000e-59 241.0
10 TraesCS1A01G116900 chr1B 87.432 183 9 5 2581 2763 174762735 174762567 6.230000e-47 198.0
11 TraesCS1A01G116900 chr1B 93.694 111 7 0 563 673 174764369 174764259 1.760000e-37 167.0
12 TraesCS1A01G116900 chr1B 91.818 110 8 1 396 505 174765021 174764913 4.920000e-33 152.0
13 TraesCS1A01G116900 chr1B 92.063 63 5 0 338 400 174765422 174765360 3.920000e-14 89.8
14 TraesCS1A01G116900 chr2B 93.803 710 41 3 1881 2588 553608182 553608890 0.000000e+00 1064.0
15 TraesCS1A01G116900 chr2B 89.675 707 67 5 1884 2585 30128688 30127983 0.000000e+00 896.0
16 TraesCS1A01G116900 chrUn 93.575 716 38 3 1871 2585 338026783 338027491 0.000000e+00 1061.0
17 TraesCS1A01G116900 chrUn 93.689 713 37 3 1874 2585 368231781 368231076 0.000000e+00 1061.0
18 TraesCS1A01G116900 chrUn 93.689 713 37 3 1874 2585 368292213 368291508 0.000000e+00 1061.0
19 TraesCS1A01G116900 chr4B 93.575 716 38 3 1871 2585 40552235 40552943 0.000000e+00 1061.0
20 TraesCS1A01G116900 chr3A 93.201 706 46 2 1881 2585 60763280 60763984 0.000000e+00 1037.0
21 TraesCS1A01G116900 chr3A 91.729 266 13 4 1 259 742609413 742609676 7.510000e-96 361.0
22 TraesCS1A01G116900 chr3A 90.909 99 9 0 1328 1426 102554902 102555000 1.780000e-27 134.0
23 TraesCS1A01G116900 chr3D 92.057 705 50 6 1885 2588 536213034 536212335 0.000000e+00 987.0
24 TraesCS1A01G116900 chr3D 90.909 99 9 0 1328 1426 86237179 86237277 1.780000e-27 134.0
25 TraesCS1A01G116900 chr4D 88.857 350 18 5 2240 2585 505032974 505032642 7.360000e-111 411.0
26 TraesCS1A01G116900 chr4D 89.085 284 25 5 1 279 40176245 40175963 5.850000e-92 348.0
27 TraesCS1A01G116900 chr7D 89.928 278 21 3 1 275 91115722 91115995 4.520000e-93 351.0
28 TraesCS1A01G116900 chr7D 90.299 268 19 7 1 263 390914591 390914326 7.570000e-91 344.0
29 TraesCS1A01G116900 chr7D 88.000 75 9 0 2773 2847 101792300 101792226 3.920000e-14 89.8
30 TraesCS1A01G116900 chr5D 91.538 260 15 4 1 259 432767200 432766947 4.520000e-93 351.0
31 TraesCS1A01G116900 chr7B 91.188 261 15 3 1 259 479203603 479203349 5.850000e-92 348.0
32 TraesCS1A01G116900 chr7B 89.811 265 18 5 1 263 535452410 535452153 5.890000e-87 331.0
33 TraesCS1A01G116900 chr3B 89.781 274 23 4 3 271 107604882 107604609 2.100000e-91 346.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G116900 chr1A 124179830 124182682 2852 True 5269.00 5269 100.0000 1 2853 1 chr1A.!!$R1 2852
1 TraesCS1A01G116900 chr1D 114064082 114065682 1600 True 935.00 1681 88.5230 563 2853 2 chr1D.!!$R3 2290
2 TraesCS1A01G116900 chr1B 174762567 174765422 2855 True 379.96 1293 90.6216 338 2763 5 chr1B.!!$R3 2425
3 TraesCS1A01G116900 chr2B 553608182 553608890 708 False 1064.00 1064 93.8030 1881 2588 1 chr2B.!!$F1 707
4 TraesCS1A01G116900 chr2B 30127983 30128688 705 True 896.00 896 89.6750 1884 2585 1 chr2B.!!$R1 701
5 TraesCS1A01G116900 chrUn 338026783 338027491 708 False 1061.00 1061 93.5750 1871 2585 1 chrUn.!!$F1 714
6 TraesCS1A01G116900 chrUn 368231076 368231781 705 True 1061.00 1061 93.6890 1874 2585 1 chrUn.!!$R1 711
7 TraesCS1A01G116900 chrUn 368291508 368292213 705 True 1061.00 1061 93.6890 1874 2585 1 chrUn.!!$R2 711
8 TraesCS1A01G116900 chr4B 40552235 40552943 708 False 1061.00 1061 93.5750 1871 2585 1 chr4B.!!$F1 714
9 TraesCS1A01G116900 chr3A 60763280 60763984 704 False 1037.00 1037 93.2010 1881 2585 1 chr3A.!!$F1 704
10 TraesCS1A01G116900 chr3D 536212335 536213034 699 True 987.00 987 92.0570 1885 2588 1 chr3D.!!$R1 703

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
90 91 0.039437 TTCGTTCCAGTCTCTGCGTC 60.039 55.0 0.0 0.0 0.00 5.19 F
167 168 0.108585 TTGTGTCTTGAGCCCACCTC 59.891 55.0 0.0 0.0 41.15 3.85 F
170 171 0.116342 TGTCTTGAGCCCACCTCCTA 59.884 55.0 0.0 0.0 39.98 2.94 F
200 201 0.331616 ATAGTTGAGGTTGTGGCCCC 59.668 55.0 0.0 0.0 0.00 5.80 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1110 2326 0.036010 AGGAAACCACGGATGCTGAG 60.036 55.000 0.00 0.0 0.00 3.35 R
1304 2523 0.879765 GACGAACGTCTTCTCCTCCA 59.120 55.000 18.12 0.0 41.57 3.86 R
1510 2729 1.005037 AGCACGGCGAGAAACATGA 60.005 52.632 16.62 0.0 0.00 3.07 R
2134 3365 1.138247 GTACGCCGGAGTCGTCATT 59.862 57.895 16.27 0.0 37.98 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.377370 CCATGTTCCGACTGCACA 57.623 55.556 0.00 0.00 0.00 4.57
18 19 2.627791 CCATGTTCCGACTGCACAA 58.372 52.632 0.00 0.00 0.00 3.33
19 20 0.238289 CCATGTTCCGACTGCACAAC 59.762 55.000 0.00 0.00 0.00 3.32
20 21 0.943673 CATGTTCCGACTGCACAACA 59.056 50.000 0.00 0.00 33.42 3.33
41 42 4.456280 AGTTCGCTGATGTGATGACTAA 57.544 40.909 0.00 0.00 32.25 2.24
42 43 4.428209 AGTTCGCTGATGTGATGACTAAG 58.572 43.478 0.00 0.00 32.25 2.18
43 44 3.443099 TCGCTGATGTGATGACTAAGG 57.557 47.619 0.00 0.00 0.00 2.69
44 45 2.101415 TCGCTGATGTGATGACTAAGGG 59.899 50.000 0.00 0.00 0.00 3.95
45 46 2.101415 CGCTGATGTGATGACTAAGGGA 59.899 50.000 0.00 0.00 0.00 4.20
46 47 3.462021 GCTGATGTGATGACTAAGGGAC 58.538 50.000 0.00 0.00 0.00 4.46
48 49 4.691175 CTGATGTGATGACTAAGGGACTG 58.309 47.826 0.00 0.00 40.86 3.51
49 50 3.118629 TGATGTGATGACTAAGGGACTGC 60.119 47.826 0.00 0.00 40.86 4.40
50 51 1.555075 TGTGATGACTAAGGGACTGCC 59.445 52.381 0.00 0.00 40.86 4.85
51 52 0.824109 TGATGACTAAGGGACTGCCG 59.176 55.000 0.00 0.00 40.86 5.69
52 53 1.112113 GATGACTAAGGGACTGCCGA 58.888 55.000 0.00 0.00 40.86 5.54
53 54 0.824759 ATGACTAAGGGACTGCCGAC 59.175 55.000 0.00 0.00 40.86 4.79
54 55 0.251653 TGACTAAGGGACTGCCGACT 60.252 55.000 0.00 0.00 40.86 4.18
55 56 0.896226 GACTAAGGGACTGCCGACTT 59.104 55.000 0.00 0.00 40.86 3.01
56 57 0.896226 ACTAAGGGACTGCCGACTTC 59.104 55.000 0.00 0.00 40.86 3.01
57 58 0.175989 CTAAGGGACTGCCGACTTCC 59.824 60.000 0.00 0.00 40.86 3.46
58 59 0.543410 TAAGGGACTGCCGACTTCCA 60.543 55.000 0.00 0.00 40.86 3.53
59 60 1.201429 AAGGGACTGCCGACTTCCAT 61.201 55.000 0.00 0.00 40.86 3.41
60 61 1.153349 GGGACTGCCGACTTCCATC 60.153 63.158 0.00 0.00 33.83 3.51
61 62 1.617947 GGGACTGCCGACTTCCATCT 61.618 60.000 0.00 0.00 33.83 2.90
62 63 0.250513 GGACTGCCGACTTCCATCTT 59.749 55.000 0.00 0.00 0.00 2.40
63 64 1.646189 GACTGCCGACTTCCATCTTC 58.354 55.000 0.00 0.00 0.00 2.87
64 65 0.108615 ACTGCCGACTTCCATCTTCG 60.109 55.000 0.00 0.00 0.00 3.79
65 66 0.173481 CTGCCGACTTCCATCTTCGA 59.827 55.000 0.00 0.00 34.62 3.71
66 67 0.173481 TGCCGACTTCCATCTTCGAG 59.827 55.000 0.00 0.00 34.62 4.04
67 68 0.528684 GCCGACTTCCATCTTCGAGG 60.529 60.000 0.00 0.00 34.62 4.63
68 69 1.103803 CCGACTTCCATCTTCGAGGA 58.896 55.000 0.00 0.00 34.62 3.71
69 70 1.066303 CCGACTTCCATCTTCGAGGAG 59.934 57.143 2.89 0.00 34.91 3.69
70 71 1.746220 CGACTTCCATCTTCGAGGAGT 59.254 52.381 2.89 0.00 34.91 3.85
71 72 2.164624 CGACTTCCATCTTCGAGGAGTT 59.835 50.000 2.89 0.00 34.91 3.01
72 73 3.367498 CGACTTCCATCTTCGAGGAGTTT 60.367 47.826 2.89 0.00 34.91 2.66
73 74 4.177783 GACTTCCATCTTCGAGGAGTTTC 58.822 47.826 2.89 0.00 34.91 2.78
74 75 2.941453 TCCATCTTCGAGGAGTTTCG 57.059 50.000 2.89 0.00 41.79 3.46
75 76 2.168496 TCCATCTTCGAGGAGTTTCGT 58.832 47.619 2.89 0.00 41.22 3.85
76 77 2.561419 TCCATCTTCGAGGAGTTTCGTT 59.439 45.455 2.89 0.00 41.22 3.85
77 78 2.924290 CCATCTTCGAGGAGTTTCGTTC 59.076 50.000 2.89 0.00 41.22 3.95
78 79 2.719426 TCTTCGAGGAGTTTCGTTCC 57.281 50.000 0.00 0.00 41.22 3.62
79 80 1.958579 TCTTCGAGGAGTTTCGTTCCA 59.041 47.619 0.00 0.00 41.22 3.53
80 81 2.030185 TCTTCGAGGAGTTTCGTTCCAG 60.030 50.000 0.00 0.00 41.22 3.86
81 82 1.325355 TCGAGGAGTTTCGTTCCAGT 58.675 50.000 0.00 0.00 41.22 4.00
82 83 1.268899 TCGAGGAGTTTCGTTCCAGTC 59.731 52.381 0.00 0.00 41.22 3.51
83 84 1.269998 CGAGGAGTTTCGTTCCAGTCT 59.730 52.381 0.00 0.00 37.18 3.24
84 85 2.668834 CGAGGAGTTTCGTTCCAGTCTC 60.669 54.545 0.00 0.00 37.18 3.36
85 86 2.559231 GAGGAGTTTCGTTCCAGTCTCT 59.441 50.000 0.00 0.00 37.18 3.10
86 87 2.297597 AGGAGTTTCGTTCCAGTCTCTG 59.702 50.000 0.00 0.00 37.18 3.35
87 88 2.062519 GAGTTTCGTTCCAGTCTCTGC 58.937 52.381 0.00 0.00 0.00 4.26
88 89 0.784778 GTTTCGTTCCAGTCTCTGCG 59.215 55.000 0.00 0.00 0.00 5.18
89 90 0.387929 TTTCGTTCCAGTCTCTGCGT 59.612 50.000 0.00 0.00 0.00 5.24
90 91 0.039437 TTCGTTCCAGTCTCTGCGTC 60.039 55.000 0.00 0.00 0.00 5.19
91 92 0.889638 TCGTTCCAGTCTCTGCGTCT 60.890 55.000 0.00 0.00 0.00 4.18
92 93 0.455295 CGTTCCAGTCTCTGCGTCTC 60.455 60.000 0.00 0.00 0.00 3.36
93 94 0.109039 GTTCCAGTCTCTGCGTCTCC 60.109 60.000 0.00 0.00 0.00 3.71
94 95 0.539669 TTCCAGTCTCTGCGTCTCCA 60.540 55.000 0.00 0.00 0.00 3.86
95 96 0.962855 TCCAGTCTCTGCGTCTCCAG 60.963 60.000 0.00 0.00 0.00 3.86
96 97 1.153862 CAGTCTCTGCGTCTCCAGC 60.154 63.158 0.00 0.00 32.87 4.85
97 98 2.202544 GTCTCTGCGTCTCCAGCG 60.203 66.667 0.00 0.00 37.44 5.18
128 129 3.961414 GGGAGCGGGGGTGTTGAA 61.961 66.667 0.00 0.00 0.00 2.69
129 130 2.355115 GGAGCGGGGGTGTTGAAT 59.645 61.111 0.00 0.00 0.00 2.57
130 131 1.605453 GGAGCGGGGGTGTTGAATA 59.395 57.895 0.00 0.00 0.00 1.75
131 132 0.182775 GGAGCGGGGGTGTTGAATAT 59.817 55.000 0.00 0.00 0.00 1.28
132 133 1.418637 GGAGCGGGGGTGTTGAATATA 59.581 52.381 0.00 0.00 0.00 0.86
133 134 2.039879 GGAGCGGGGGTGTTGAATATAT 59.960 50.000 0.00 0.00 0.00 0.86
134 135 3.497942 GGAGCGGGGGTGTTGAATATATT 60.498 47.826 0.00 0.00 0.00 1.28
135 136 3.486383 AGCGGGGGTGTTGAATATATTG 58.514 45.455 1.78 0.00 0.00 1.90
136 137 3.117663 AGCGGGGGTGTTGAATATATTGT 60.118 43.478 1.78 0.00 0.00 2.71
137 138 3.004315 GCGGGGGTGTTGAATATATTGTG 59.996 47.826 1.78 0.00 0.00 3.33
138 139 4.204012 CGGGGGTGTTGAATATATTGTGT 58.796 43.478 1.78 0.00 0.00 3.72
139 140 5.369833 CGGGGGTGTTGAATATATTGTGTA 58.630 41.667 1.78 0.00 0.00 2.90
140 141 5.237779 CGGGGGTGTTGAATATATTGTGTAC 59.762 44.000 1.78 0.00 0.00 2.90
141 142 6.123651 GGGGGTGTTGAATATATTGTGTACA 58.876 40.000 1.78 0.00 0.00 2.90
142 143 6.775629 GGGGGTGTTGAATATATTGTGTACAT 59.224 38.462 1.78 0.00 0.00 2.29
143 144 7.255451 GGGGGTGTTGAATATATTGTGTACATG 60.255 40.741 1.78 0.00 0.00 3.21
144 145 7.284489 GGGGTGTTGAATATATTGTGTACATGT 59.716 37.037 2.69 2.69 0.00 3.21
145 146 9.332502 GGGTGTTGAATATATTGTGTACATGTA 57.667 33.333 1.78 0.08 0.00 2.29
158 159 9.665719 ATTGTGTACATGTATATTGTGTCTTGA 57.334 29.630 9.18 0.00 0.00 3.02
159 160 8.702163 TGTGTACATGTATATTGTGTCTTGAG 57.298 34.615 9.18 0.00 0.00 3.02
160 161 7.277760 TGTGTACATGTATATTGTGTCTTGAGC 59.722 37.037 9.18 0.00 0.00 4.26
161 162 6.761242 TGTACATGTATATTGTGTCTTGAGCC 59.239 38.462 9.18 0.00 0.00 4.70
162 163 5.126067 ACATGTATATTGTGTCTTGAGCCC 58.874 41.667 0.00 0.00 0.00 5.19
163 164 4.835284 TGTATATTGTGTCTTGAGCCCA 57.165 40.909 0.00 0.00 0.00 5.36
164 165 4.513442 TGTATATTGTGTCTTGAGCCCAC 58.487 43.478 0.00 0.00 0.00 4.61
165 166 2.489938 TATTGTGTCTTGAGCCCACC 57.510 50.000 0.00 0.00 0.00 4.61
166 167 0.773644 ATTGTGTCTTGAGCCCACCT 59.226 50.000 0.00 0.00 0.00 4.00
167 168 0.108585 TTGTGTCTTGAGCCCACCTC 59.891 55.000 0.00 0.00 41.15 3.85
168 169 1.003233 GTGTCTTGAGCCCACCTCC 60.003 63.158 0.00 0.00 39.98 4.30
169 170 1.152030 TGTCTTGAGCCCACCTCCT 60.152 57.895 0.00 0.00 39.98 3.69
170 171 0.116342 TGTCTTGAGCCCACCTCCTA 59.884 55.000 0.00 0.00 39.98 2.94
171 172 0.827368 GTCTTGAGCCCACCTCCTAG 59.173 60.000 0.00 0.00 39.98 3.02
172 173 0.413832 TCTTGAGCCCACCTCCTAGT 59.586 55.000 0.00 0.00 39.98 2.57
173 174 1.203313 TCTTGAGCCCACCTCCTAGTT 60.203 52.381 0.00 0.00 39.98 2.24
174 175 1.208293 CTTGAGCCCACCTCCTAGTTC 59.792 57.143 0.00 0.00 39.98 3.01
175 176 0.116342 TGAGCCCACCTCCTAGTTCA 59.884 55.000 0.00 0.00 39.98 3.18
176 177 1.273838 TGAGCCCACCTCCTAGTTCAT 60.274 52.381 0.00 0.00 39.98 2.57
177 178 2.023404 TGAGCCCACCTCCTAGTTCATA 60.023 50.000 0.00 0.00 39.98 2.15
178 179 3.243724 GAGCCCACCTCCTAGTTCATAT 58.756 50.000 0.00 0.00 34.35 1.78
179 180 2.975489 AGCCCACCTCCTAGTTCATATG 59.025 50.000 0.00 0.00 0.00 1.78
180 181 2.706190 GCCCACCTCCTAGTTCATATGT 59.294 50.000 1.90 0.00 0.00 2.29
181 182 3.901844 GCCCACCTCCTAGTTCATATGTA 59.098 47.826 1.90 0.00 0.00 2.29
182 183 4.532521 GCCCACCTCCTAGTTCATATGTAT 59.467 45.833 1.90 0.00 0.00 2.29
183 184 5.720041 GCCCACCTCCTAGTTCATATGTATA 59.280 44.000 1.90 0.00 0.00 1.47
184 185 6.127310 GCCCACCTCCTAGTTCATATGTATAG 60.127 46.154 1.90 4.04 0.00 1.31
185 186 6.954684 CCCACCTCCTAGTTCATATGTATAGT 59.045 42.308 1.90 0.00 0.00 2.12
186 187 7.455008 CCCACCTCCTAGTTCATATGTATAGTT 59.545 40.741 1.90 0.00 0.00 2.24
187 188 8.307483 CCACCTCCTAGTTCATATGTATAGTTG 58.693 40.741 1.90 0.36 0.00 3.16
188 189 9.078990 CACCTCCTAGTTCATATGTATAGTTGA 57.921 37.037 1.90 0.00 0.00 3.18
189 190 9.303116 ACCTCCTAGTTCATATGTATAGTTGAG 57.697 37.037 1.90 6.71 0.00 3.02
190 191 8.744652 CCTCCTAGTTCATATGTATAGTTGAGG 58.255 40.741 1.90 10.78 0.00 3.86
191 192 9.303116 CTCCTAGTTCATATGTATAGTTGAGGT 57.697 37.037 1.90 0.00 0.00 3.85
192 193 9.656323 TCCTAGTTCATATGTATAGTTGAGGTT 57.344 33.333 1.90 0.00 0.00 3.50
193 194 9.698309 CCTAGTTCATATGTATAGTTGAGGTTG 57.302 37.037 1.90 0.00 0.00 3.77
195 196 8.948631 AGTTCATATGTATAGTTGAGGTTGTG 57.051 34.615 1.90 0.00 0.00 3.33
196 197 7.987458 AGTTCATATGTATAGTTGAGGTTGTGG 59.013 37.037 1.90 0.00 0.00 4.17
197 198 6.288294 TCATATGTATAGTTGAGGTTGTGGC 58.712 40.000 1.90 0.00 0.00 5.01
198 199 3.343941 TGTATAGTTGAGGTTGTGGCC 57.656 47.619 0.00 0.00 0.00 5.36
199 200 2.026636 TGTATAGTTGAGGTTGTGGCCC 60.027 50.000 0.00 0.00 0.00 5.80
200 201 0.331616 ATAGTTGAGGTTGTGGCCCC 59.668 55.000 0.00 0.00 0.00 5.80
201 202 1.785353 TAGTTGAGGTTGTGGCCCCC 61.785 60.000 0.00 0.00 0.00 5.40
202 203 2.780924 TTGAGGTTGTGGCCCCCT 60.781 61.111 0.00 0.00 0.00 4.79
203 204 2.840753 TTGAGGTTGTGGCCCCCTC 61.841 63.158 16.83 16.83 44.16 4.30
204 205 4.048470 GAGGTTGTGGCCCCCTCC 62.048 72.222 14.03 6.36 39.10 4.30
205 206 4.938756 AGGTTGTGGCCCCCTCCA 62.939 66.667 0.00 0.00 0.00 3.86
206 207 3.672503 GGTTGTGGCCCCCTCCAT 61.673 66.667 0.00 0.00 38.57 3.41
207 208 2.313427 GGTTGTGGCCCCCTCCATA 61.313 63.158 0.00 0.00 38.57 2.74
208 209 1.076995 GTTGTGGCCCCCTCCATAC 60.077 63.158 0.00 0.00 38.57 2.39
209 210 1.542628 TTGTGGCCCCCTCCATACA 60.543 57.895 0.00 0.00 38.57 2.29
210 211 0.923729 TTGTGGCCCCCTCCATACAT 60.924 55.000 0.00 0.00 38.57 2.29
211 212 1.352622 TGTGGCCCCCTCCATACATC 61.353 60.000 0.00 0.00 38.57 3.06
212 213 1.005423 TGGCCCCCTCCATACATCA 59.995 57.895 0.00 0.00 0.00 3.07
213 214 0.403304 TGGCCCCCTCCATACATCAT 60.403 55.000 0.00 0.00 0.00 2.45
214 215 1.132234 TGGCCCCCTCCATACATCATA 60.132 52.381 0.00 0.00 0.00 2.15
215 216 2.208872 GGCCCCCTCCATACATCATAT 58.791 52.381 0.00 0.00 0.00 1.78
216 217 3.246684 TGGCCCCCTCCATACATCATATA 60.247 47.826 0.00 0.00 0.00 0.86
217 218 3.983410 GGCCCCCTCCATACATCATATAT 59.017 47.826 0.00 0.00 0.00 0.86
218 219 5.162637 GGCCCCCTCCATACATCATATATA 58.837 45.833 0.00 0.00 0.00 0.86
219 220 5.013183 GGCCCCCTCCATACATCATATATAC 59.987 48.000 0.00 0.00 0.00 1.47
220 221 5.606749 GCCCCCTCCATACATCATATATACA 59.393 44.000 0.00 0.00 0.00 2.29
221 222 6.273260 GCCCCCTCCATACATCATATATACAT 59.727 42.308 0.00 0.00 0.00 2.29
222 223 7.683578 CCCCCTCCATACATCATATATACATG 58.316 42.308 0.00 0.00 0.00 3.21
223 224 7.164122 CCCCTCCATACATCATATATACATGC 58.836 42.308 0.00 0.00 0.00 4.06
224 225 7.164122 CCCTCCATACATCATATATACATGCC 58.836 42.308 0.00 0.00 0.00 4.40
225 226 7.016957 CCCTCCATACATCATATATACATGCCT 59.983 40.741 0.00 0.00 0.00 4.75
226 227 7.876582 CCTCCATACATCATATATACATGCCTG 59.123 40.741 0.00 0.00 0.00 4.85
227 228 7.738847 TCCATACATCATATATACATGCCTGG 58.261 38.462 13.14 13.14 0.00 4.45
228 229 7.348011 TCCATACATCATATATACATGCCTGGT 59.652 37.037 15.96 0.00 0.00 4.00
229 230 7.443272 CCATACATCATATATACATGCCTGGTG 59.557 40.741 0.00 4.62 0.00 4.17
230 231 5.188434 ACATCATATATACATGCCTGGTGC 58.812 41.667 0.00 0.00 41.77 5.01
239 240 2.359850 GCCTGGTGCACCGATCAA 60.360 61.111 30.07 12.05 40.77 2.57
240 241 1.971167 GCCTGGTGCACCGATCAAA 60.971 57.895 30.07 11.27 40.77 2.69
241 242 1.926511 GCCTGGTGCACCGATCAAAG 61.927 60.000 30.07 19.93 40.77 2.77
242 243 1.503542 CTGGTGCACCGATCAAAGC 59.496 57.895 30.07 4.16 39.43 3.51
243 244 1.228094 TGGTGCACCGATCAAAGCA 60.228 52.632 30.07 7.05 39.43 3.91
244 245 0.821301 TGGTGCACCGATCAAAGCAA 60.821 50.000 30.07 6.24 38.91 3.91
245 246 0.527565 GGTGCACCGATCAAAGCAAT 59.472 50.000 22.49 0.00 38.91 3.56
246 247 1.067635 GGTGCACCGATCAAAGCAATT 60.068 47.619 22.49 0.00 38.91 2.32
247 248 1.987770 GTGCACCGATCAAAGCAATTG 59.012 47.619 5.22 0.00 38.91 2.32
248 249 1.612950 TGCACCGATCAAAGCAATTGT 59.387 42.857 7.40 0.00 40.11 2.71
249 250 1.987770 GCACCGATCAAAGCAATTGTG 59.012 47.619 7.40 0.00 40.11 3.33
250 251 2.607771 GCACCGATCAAAGCAATTGTGT 60.608 45.455 7.40 0.00 40.11 3.72
251 252 3.641648 CACCGATCAAAGCAATTGTGTT 58.358 40.909 7.40 0.00 40.11 3.32
252 253 3.426191 CACCGATCAAAGCAATTGTGTTG 59.574 43.478 7.40 11.37 40.11 3.33
253 254 2.409378 CCGATCAAAGCAATTGTGTTGC 59.591 45.455 7.40 4.68 45.22 4.17
257 258 3.188492 TCAAAGCAATTGTGTTGCACAG 58.812 40.909 14.33 4.33 45.39 3.66
258 259 1.574134 AAGCAATTGTGTTGCACAGC 58.426 45.000 14.33 2.17 45.39 4.40
259 260 0.460722 AGCAATTGTGTTGCACAGCA 59.539 45.000 14.33 0.00 45.39 4.41
260 261 1.069513 AGCAATTGTGTTGCACAGCAT 59.930 42.857 14.33 0.00 45.39 3.79
261 262 1.868498 GCAATTGTGTTGCACAGCATT 59.132 42.857 7.40 0.00 45.39 3.56
262 263 2.096614 GCAATTGTGTTGCACAGCATTC 60.097 45.455 7.40 0.00 45.39 2.67
263 264 2.443887 ATTGTGTTGCACAGCATTCC 57.556 45.000 2.17 0.00 45.39 3.01
264 265 1.109609 TTGTGTTGCACAGCATTCCA 58.890 45.000 2.17 0.00 45.39 3.53
265 266 0.669619 TGTGTTGCACAGCATTCCAG 59.330 50.000 0.00 0.00 39.62 3.86
266 267 0.670162 GTGTTGCACAGCATTCCAGT 59.330 50.000 0.00 0.00 38.76 4.00
267 268 0.953727 TGTTGCACAGCATTCCAGTC 59.046 50.000 0.00 0.00 38.76 3.51
268 269 1.242076 GTTGCACAGCATTCCAGTCT 58.758 50.000 0.00 0.00 38.76 3.24
269 270 1.610522 GTTGCACAGCATTCCAGTCTT 59.389 47.619 0.00 0.00 38.76 3.01
270 271 1.527034 TGCACAGCATTCCAGTCTTC 58.473 50.000 0.00 0.00 31.71 2.87
271 272 0.807496 GCACAGCATTCCAGTCTTCC 59.193 55.000 0.00 0.00 0.00 3.46
272 273 1.883638 GCACAGCATTCCAGTCTTCCA 60.884 52.381 0.00 0.00 0.00 3.53
273 274 1.808945 CACAGCATTCCAGTCTTCCAC 59.191 52.381 0.00 0.00 0.00 4.02
274 275 1.421268 ACAGCATTCCAGTCTTCCACA 59.579 47.619 0.00 0.00 0.00 4.17
275 276 2.158623 ACAGCATTCCAGTCTTCCACAA 60.159 45.455 0.00 0.00 0.00 3.33
276 277 2.227388 CAGCATTCCAGTCTTCCACAAC 59.773 50.000 0.00 0.00 0.00 3.32
277 278 2.158623 AGCATTCCAGTCTTCCACAACA 60.159 45.455 0.00 0.00 0.00 3.33
278 279 2.622942 GCATTCCAGTCTTCCACAACAA 59.377 45.455 0.00 0.00 0.00 2.83
279 280 3.304928 GCATTCCAGTCTTCCACAACAAG 60.305 47.826 0.00 0.00 0.00 3.16
280 281 3.924114 TTCCAGTCTTCCACAACAAGA 57.076 42.857 0.00 0.00 0.00 3.02
281 282 3.475566 TCCAGTCTTCCACAACAAGAG 57.524 47.619 0.00 0.00 30.32 2.85
282 283 2.771943 TCCAGTCTTCCACAACAAGAGT 59.228 45.455 0.00 0.00 34.42 3.24
283 284 3.199946 TCCAGTCTTCCACAACAAGAGTT 59.800 43.478 0.00 0.00 38.88 3.01
294 295 3.971245 AACAAGAGTTGAGGCTAGGAG 57.029 47.619 0.00 0.00 36.39 3.69
295 296 1.552792 ACAAGAGTTGAGGCTAGGAGC 59.447 52.381 0.00 0.00 41.46 4.70
296 297 1.552337 CAAGAGTTGAGGCTAGGAGCA 59.448 52.381 0.21 0.00 44.75 4.26
297 298 1.944177 AGAGTTGAGGCTAGGAGCAA 58.056 50.000 0.21 0.00 44.75 3.91
298 299 2.476199 AGAGTTGAGGCTAGGAGCAAT 58.524 47.619 0.21 0.00 44.75 3.56
299 300 2.170187 AGAGTTGAGGCTAGGAGCAATG 59.830 50.000 0.21 0.00 44.75 2.82
300 301 2.169352 GAGTTGAGGCTAGGAGCAATGA 59.831 50.000 0.21 0.00 44.75 2.57
301 302 2.170187 AGTTGAGGCTAGGAGCAATGAG 59.830 50.000 0.21 0.00 44.75 2.90
302 303 0.467384 TGAGGCTAGGAGCAATGAGC 59.533 55.000 0.21 0.00 44.75 4.26
314 315 3.022607 GCAATGAGCTGAAGCAAAAGT 57.977 42.857 4.90 0.00 45.16 2.66
315 316 4.164822 GCAATGAGCTGAAGCAAAAGTA 57.835 40.909 4.90 0.00 45.16 2.24
316 317 3.916776 GCAATGAGCTGAAGCAAAAGTAC 59.083 43.478 4.90 0.00 45.16 2.73
317 318 4.479619 CAATGAGCTGAAGCAAAAGTACC 58.520 43.478 4.90 0.00 45.16 3.34
318 319 3.207265 TGAGCTGAAGCAAAAGTACCA 57.793 42.857 4.90 0.00 45.16 3.25
319 320 3.550820 TGAGCTGAAGCAAAAGTACCAA 58.449 40.909 4.90 0.00 45.16 3.67
320 321 3.315191 TGAGCTGAAGCAAAAGTACCAAC 59.685 43.478 4.90 0.00 45.16 3.77
321 322 3.287222 AGCTGAAGCAAAAGTACCAACA 58.713 40.909 4.90 0.00 45.16 3.33
322 323 3.066760 AGCTGAAGCAAAAGTACCAACAC 59.933 43.478 4.90 0.00 45.16 3.32
323 324 3.181491 GCTGAAGCAAAAGTACCAACACA 60.181 43.478 0.00 0.00 41.59 3.72
324 325 4.499696 GCTGAAGCAAAAGTACCAACACAT 60.500 41.667 0.00 0.00 41.59 3.21
325 326 5.278266 GCTGAAGCAAAAGTACCAACACATA 60.278 40.000 0.00 0.00 41.59 2.29
326 327 6.701145 TGAAGCAAAAGTACCAACACATAA 57.299 33.333 0.00 0.00 0.00 1.90
327 328 7.101652 TGAAGCAAAAGTACCAACACATAAA 57.898 32.000 0.00 0.00 0.00 1.40
328 329 7.548097 TGAAGCAAAAGTACCAACACATAAAA 58.452 30.769 0.00 0.00 0.00 1.52
329 330 8.200792 TGAAGCAAAAGTACCAACACATAAAAT 58.799 29.630 0.00 0.00 0.00 1.82
330 331 9.685828 GAAGCAAAAGTACCAACACATAAAATA 57.314 29.630 0.00 0.00 0.00 1.40
368 369 7.761409 TGTGAATACTAACATTTCTCATTGCC 58.239 34.615 0.00 0.00 0.00 4.52
370 371 8.125448 GTGAATACTAACATTTCTCATTGCCTC 58.875 37.037 0.00 0.00 0.00 4.70
371 372 6.851222 ATACTAACATTTCTCATTGCCTCG 57.149 37.500 0.00 0.00 0.00 4.63
400 401 4.137543 AGAAAGTACTTGCAACAAGAGGG 58.862 43.478 16.18 0.00 0.00 4.30
401 402 3.857157 AAGTACTTGCAACAAGAGGGA 57.143 42.857 7.48 0.00 0.00 4.20
402 403 3.857157 AGTACTTGCAACAAGAGGGAA 57.143 42.857 13.94 0.00 0.00 3.97
429 772 3.756963 GGCTCGGGTGATTTAAGTTTCTT 59.243 43.478 0.00 0.00 0.00 2.52
505 848 3.771216 ACCTTTTCAAGCCATCATCACT 58.229 40.909 0.00 0.00 0.00 3.41
506 849 4.922206 ACCTTTTCAAGCCATCATCACTA 58.078 39.130 0.00 0.00 0.00 2.74
507 850 4.946157 ACCTTTTCAAGCCATCATCACTAG 59.054 41.667 0.00 0.00 0.00 2.57
508 851 5.188434 CCTTTTCAAGCCATCATCACTAGA 58.812 41.667 0.00 0.00 0.00 2.43
509 852 5.826737 CCTTTTCAAGCCATCATCACTAGAT 59.173 40.000 0.00 0.00 33.87 1.98
512 855 8.806429 TTTTCAAGCCATCATCACTAGATAAA 57.194 30.769 0.00 0.00 31.88 1.40
514 857 8.806429 TTCAAGCCATCATCACTAGATAAAAA 57.194 30.769 0.00 0.00 31.88 1.94
515 858 8.985315 TCAAGCCATCATCACTAGATAAAAAT 57.015 30.769 0.00 0.00 31.88 1.82
516 859 8.843262 TCAAGCCATCATCACTAGATAAAAATG 58.157 33.333 0.00 0.00 31.88 2.32
518 861 8.757982 AGCCATCATCACTAGATAAAAATGTT 57.242 30.769 0.00 0.00 31.88 2.71
519 862 9.851686 AGCCATCATCACTAGATAAAAATGTTA 57.148 29.630 0.00 0.00 31.88 2.41
577 1406 6.814506 ATCATCATAAGCTTTGTCATAGGC 57.185 37.500 3.20 0.00 0.00 3.93
593 1422 7.255569 TGTCATAGGCTAATATCGAATTACCG 58.744 38.462 0.00 0.00 0.00 4.02
726 1587 1.877443 GTGGTGAATTTAGGTGCGTGT 59.123 47.619 0.00 0.00 0.00 4.49
750 1611 1.005867 TCCCGGTCGGAAAAACTCG 60.006 57.895 11.39 0.00 37.88 4.18
755 1944 0.883370 GGTCGGAAAAACTCGGTGCT 60.883 55.000 0.00 0.00 0.00 4.40
777 1966 2.049433 ACGCCCTCGAAGAACGTG 60.049 61.111 0.00 0.00 38.77 4.49
779 1968 1.153823 CGCCCTCGAAGAACGTGAT 60.154 57.895 0.00 0.00 43.13 3.06
780 1969 1.413767 CGCCCTCGAAGAACGTGATG 61.414 60.000 0.00 0.00 43.13 3.07
789 1978 2.230892 GAACGTGATGTTCGTGGCA 58.769 52.632 1.29 0.00 46.85 4.92
796 1985 3.637432 GTGATGTTCGTGGCAAATGAAA 58.363 40.909 0.00 0.00 35.55 2.69
819 2008 4.619227 ACACCCGAACGGCCAGTG 62.619 66.667 2.24 15.50 33.27 3.66
938 2141 1.338769 GCGCCGGTATAAATCTCCCAT 60.339 52.381 1.90 0.00 0.00 4.00
946 2150 0.679505 TAAATCTCCCATCCCTCGCG 59.320 55.000 0.00 0.00 0.00 5.87
961 2165 2.877691 GCGCCAACAACTCCATCC 59.122 61.111 0.00 0.00 0.00 3.51
964 2168 0.680921 CGCCAACAACTCCATCCCAT 60.681 55.000 0.00 0.00 0.00 4.00
965 2169 1.106285 GCCAACAACTCCATCCCATC 58.894 55.000 0.00 0.00 0.00 3.51
966 2170 1.341383 GCCAACAACTCCATCCCATCT 60.341 52.381 0.00 0.00 0.00 2.90
968 2172 2.025981 CCAACAACTCCATCCCATCTCA 60.026 50.000 0.00 0.00 0.00 3.27
969 2173 3.012518 CAACAACTCCATCCCATCTCAC 58.987 50.000 0.00 0.00 0.00 3.51
970 2174 2.555664 ACAACTCCATCCCATCTCACT 58.444 47.619 0.00 0.00 0.00 3.41
971 2175 2.503356 ACAACTCCATCCCATCTCACTC 59.497 50.000 0.00 0.00 0.00 3.51
972 2176 1.799933 ACTCCATCCCATCTCACTCC 58.200 55.000 0.00 0.00 0.00 3.85
973 2177 1.055040 CTCCATCCCATCTCACTCCC 58.945 60.000 0.00 0.00 0.00 4.30
974 2178 0.644380 TCCATCCCATCTCACTCCCT 59.356 55.000 0.00 0.00 0.00 4.20
997 2201 1.013596 CGCAACACAGACCTCACAAA 58.986 50.000 0.00 0.00 0.00 2.83
998 2202 1.003545 CGCAACACAGACCTCACAAAG 60.004 52.381 0.00 0.00 0.00 2.77
999 2203 1.268743 GCAACACAGACCTCACAAAGC 60.269 52.381 0.00 0.00 0.00 3.51
1000 2204 2.016318 CAACACAGACCTCACAAAGCA 58.984 47.619 0.00 0.00 0.00 3.91
1001 2205 1.668419 ACACAGACCTCACAAAGCAC 58.332 50.000 0.00 0.00 0.00 4.40
1002 2206 1.065491 ACACAGACCTCACAAAGCACA 60.065 47.619 0.00 0.00 0.00 4.57
1003 2207 2.224606 CACAGACCTCACAAAGCACAT 58.775 47.619 0.00 0.00 0.00 3.21
1004 2208 2.225019 CACAGACCTCACAAAGCACATC 59.775 50.000 0.00 0.00 0.00 3.06
1005 2209 2.105477 ACAGACCTCACAAAGCACATCT 59.895 45.455 0.00 0.00 0.00 2.90
1006 2210 2.740981 CAGACCTCACAAAGCACATCTC 59.259 50.000 0.00 0.00 0.00 2.75
1007 2211 2.636893 AGACCTCACAAAGCACATCTCT 59.363 45.455 0.00 0.00 0.00 3.10
1008 2212 2.999355 GACCTCACAAAGCACATCTCTC 59.001 50.000 0.00 0.00 0.00 3.20
1009 2213 1.998315 CCTCACAAAGCACATCTCTCG 59.002 52.381 0.00 0.00 0.00 4.04
1010 2214 2.611473 CCTCACAAAGCACATCTCTCGT 60.611 50.000 0.00 0.00 0.00 4.18
1011 2215 2.665537 CTCACAAAGCACATCTCTCGTC 59.334 50.000 0.00 0.00 0.00 4.20
1012 2216 2.297315 TCACAAAGCACATCTCTCGTCT 59.703 45.455 0.00 0.00 0.00 4.18
1013 2217 2.665537 CACAAAGCACATCTCTCGTCTC 59.334 50.000 0.00 0.00 0.00 3.36
1014 2218 2.297315 ACAAAGCACATCTCTCGTCTCA 59.703 45.455 0.00 0.00 0.00 3.27
1024 2238 1.521006 CTCTCGTCTCATCTCGTCTCG 59.479 57.143 0.00 0.00 0.00 4.04
1029 2243 1.297967 CTCATCTCGTCTCGCCGTG 60.298 63.158 0.00 0.00 0.00 4.94
1101 2317 1.512230 GCCGAGCAAATCAATGGCA 59.488 52.632 0.00 0.00 42.03 4.92
1110 2326 0.542805 AATCAATGGCAATGGCACCC 59.457 50.000 12.83 0.00 41.84 4.61
1122 2338 2.821366 GCACCCTCAGCATCCGTG 60.821 66.667 0.00 0.00 0.00 4.94
1125 2341 2.224159 ACCCTCAGCATCCGTGGTT 61.224 57.895 0.00 0.00 32.81 3.67
1254 2470 2.923035 CCACTGGTCGGGTGGTCT 60.923 66.667 4.87 0.00 46.42 3.85
1257 2473 2.603473 CTGGTCGGGTGGTCTGGA 60.603 66.667 0.00 0.00 0.00 3.86
1269 2485 2.125961 GTCTGGACGGGCGGACTAT 61.126 63.158 0.00 0.00 0.00 2.12
1304 2523 4.353437 GACGCCGGTGGTCGAAGT 62.353 66.667 21.14 0.00 42.43 3.01
1341 2560 2.646175 CGGCCTGACGGAGGAGAAA 61.646 63.158 0.00 0.00 46.33 2.52
1345 2564 1.595993 CCTGACGGAGGAGAAAGCGA 61.596 60.000 0.00 0.00 46.33 4.93
1482 2701 2.515057 GCCGACACCACCACACAA 60.515 61.111 0.00 0.00 0.00 3.33
1483 2702 2.115911 GCCGACACCACCACACAAA 61.116 57.895 0.00 0.00 0.00 2.83
1485 2704 0.746563 CCGACACCACCACACAAACT 60.747 55.000 0.00 0.00 0.00 2.66
1486 2705 0.376852 CGACACCACCACACAAACTG 59.623 55.000 0.00 0.00 0.00 3.16
1487 2706 0.738389 GACACCACCACACAAACTGG 59.262 55.000 0.00 0.00 34.62 4.00
1510 2729 4.210537 GTGTTCAGTGCGTTTGTACATAGT 59.789 41.667 0.00 0.00 32.48 2.12
1547 2766 2.546795 GCTGTAATCATGGAGGAGACGG 60.547 54.545 0.00 0.00 0.00 4.79
1548 2767 1.412710 TGTAATCATGGAGGAGACGGC 59.587 52.381 0.00 0.00 0.00 5.68
1549 2768 0.673985 TAATCATGGAGGAGACGGCG 59.326 55.000 4.80 4.80 0.00 6.46
1550 2769 1.043116 AATCATGGAGGAGACGGCGA 61.043 55.000 16.62 0.00 0.00 5.54
1551 2770 1.459455 ATCATGGAGGAGACGGCGAG 61.459 60.000 16.62 0.00 0.00 5.03
1552 2771 2.121538 CATGGAGGAGACGGCGAGA 61.122 63.158 16.62 0.00 0.00 4.04
1553 2772 2.122167 ATGGAGGAGACGGCGAGAC 61.122 63.158 16.62 4.50 0.00 3.36
1554 2773 3.878519 GGAGGAGACGGCGAGACG 61.879 72.222 16.62 0.00 40.31 4.18
1660 2881 6.347563 CCATGTGCAAATGTTTCCATGTAAAC 60.348 38.462 15.77 6.93 39.35 2.01
1706 2928 4.400529 TGTCGCCATCACTATATGTGTT 57.599 40.909 0.00 0.00 46.27 3.32
1717 2939 6.754193 TCACTATATGTGTTGTGTTGTGAGA 58.246 36.000 0.00 0.00 46.27 3.27
1721 2943 2.279741 TGTGTTGTGTTGTGAGAGAGC 58.720 47.619 0.00 0.00 0.00 4.09
1730 2952 3.067601 TGTTGTGAGAGAGCGTTTACAGA 59.932 43.478 0.00 0.00 0.00 3.41
1734 2956 3.670991 GTGAGAGAGCGTTTACAGACTTG 59.329 47.826 0.00 0.00 0.00 3.16
1740 2962 3.284617 AGCGTTTACAGACTTGGGTTTT 58.715 40.909 0.00 0.00 0.00 2.43
1751 2973 3.760684 GACTTGGGTTTTCAGATGATGCT 59.239 43.478 0.00 0.00 0.00 3.79
1752 2974 4.922206 ACTTGGGTTTTCAGATGATGCTA 58.078 39.130 0.00 0.00 0.00 3.49
1758 2980 5.591877 GGGTTTTCAGATGATGCTAGTCAAT 59.408 40.000 0.00 0.00 0.00 2.57
1789 3011 2.943449 GGATACCGCTATCAGGCTAC 57.057 55.000 0.40 0.00 31.63 3.58
1813 3035 6.159988 CGGATTTATTCTGGATCTGGAGTAC 58.840 44.000 0.00 0.00 0.00 2.73
1814 3036 6.015010 CGGATTTATTCTGGATCTGGAGTACT 60.015 42.308 0.00 0.00 0.00 2.73
1815 3037 7.382898 GGATTTATTCTGGATCTGGAGTACTC 58.617 42.308 14.87 14.87 0.00 2.59
1816 3038 7.234577 GGATTTATTCTGGATCTGGAGTACTCT 59.765 40.741 21.88 2.22 0.00 3.24
1817 3039 9.303116 GATTTATTCTGGATCTGGAGTACTCTA 57.697 37.037 21.88 15.60 0.00 2.43
1821 3043 5.875224 TCTGGATCTGGAGTACTCTATCAG 58.125 45.833 21.88 19.12 0.00 2.90
1831 3053 6.381133 TGGAGTACTCTATCAGATCTGCAAAA 59.619 38.462 21.88 0.59 0.00 2.44
1861 3088 2.442878 TGCAATACCCCTGTGATGCTAT 59.557 45.455 0.00 0.00 37.90 2.97
1863 3090 4.256920 GCAATACCCCTGTGATGCTATAG 58.743 47.826 0.00 0.00 35.63 1.31
1918 3145 8.134202 TGGATAATGGAGATTAGCGATAAGAA 57.866 34.615 0.00 0.00 32.18 2.52
2102 3333 1.874562 CTTTCCCTCGACGACTCGT 59.125 57.895 3.08 3.08 45.10 4.18
2134 3365 4.827481 GGCATCGACCGCTTCTTA 57.173 55.556 8.43 0.00 0.00 2.10
2135 3366 3.059603 GGCATCGACCGCTTCTTAA 57.940 52.632 8.43 0.00 0.00 1.85
2217 3448 1.166531 GGCAGTGAACGCTTCCACTT 61.167 55.000 0.00 0.00 41.26 3.16
2324 3555 0.767375 GGCCATCCAAGCTCCTGATA 59.233 55.000 0.00 0.00 0.00 2.15
2544 3776 1.329256 AGGCGGTTATGCGAGTCTAT 58.671 50.000 0.00 0.00 35.06 1.98
2591 3823 5.186198 GTGTATCCAAACAAGGCTACTGAT 58.814 41.667 0.00 0.00 32.75 2.90
2642 3874 6.354938 ACACTGATACTGCAATGATTCTGAT 58.645 36.000 0.00 0.00 0.00 2.90
2675 3928 3.688673 GCGTAGTCTACTCTACACCAACT 59.311 47.826 8.37 0.00 39.92 3.16
2677 3930 5.352569 GCGTAGTCTACTCTACACCAACTAA 59.647 44.000 8.37 0.00 39.92 2.24
2678 3931 6.674278 GCGTAGTCTACTCTACACCAACTAAC 60.674 46.154 8.37 0.00 39.92 2.34
2679 3932 6.183360 CGTAGTCTACTCTACACCAACTAACC 60.183 46.154 8.37 0.00 39.92 2.85
2680 3933 5.890049 AGTCTACTCTACACCAACTAACCT 58.110 41.667 0.00 0.00 0.00 3.50
2681 3934 5.711036 AGTCTACTCTACACCAACTAACCTG 59.289 44.000 0.00 0.00 0.00 4.00
2682 3935 5.709164 GTCTACTCTACACCAACTAACCTGA 59.291 44.000 0.00 0.00 0.00 3.86
2683 3936 5.944599 TCTACTCTACACCAACTAACCTGAG 59.055 44.000 0.00 0.00 0.00 3.35
2684 3937 3.833070 ACTCTACACCAACTAACCTGAGG 59.167 47.826 0.00 0.00 0.00 3.86
2685 3938 3.833070 CTCTACACCAACTAACCTGAGGT 59.167 47.826 0.00 0.00 37.65 3.85
2781 4040 3.028130 TCTACACCCATGCGTCTCATAA 58.972 45.455 0.00 0.00 33.19 1.90
2790 4049 4.021981 CCATGCGTCTCATAAGTCTGGATA 60.022 45.833 0.00 0.00 33.19 2.59
2817 4076 0.601576 CGGTCATTGTCCGGTCACAA 60.602 55.000 13.59 10.80 43.68 3.33
2824 4083 5.046529 TCATTGTCCGGTCACAAAATTTTG 58.953 37.500 25.73 25.73 39.69 2.44
2827 4086 3.697045 TGTCCGGTCACAAAATTTTGACT 59.303 39.130 32.20 12.38 41.65 3.41
2832 4091 5.278463 CCGGTCACAAAATTTTGACTCAGAT 60.278 40.000 32.20 9.63 41.65 2.90
2833 4092 6.072728 CCGGTCACAAAATTTTGACTCAGATA 60.073 38.462 32.20 9.21 41.65 1.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.238289 GTTGTGCAGTCGGAACATGG 59.762 55.000 0.00 0.00 34.10 3.66
1 2 0.943673 TGTTGTGCAGTCGGAACATG 59.056 50.000 0.00 0.00 34.10 3.21
2 3 1.229428 CTGTTGTGCAGTCGGAACAT 58.771 50.000 0.00 0.00 40.27 2.71
3 4 2.689083 CTGTTGTGCAGTCGGAACA 58.311 52.632 0.00 0.00 40.27 3.18
12 13 0.587768 CATCAGCGAACTGTTGTGCA 59.412 50.000 14.45 0.00 44.77 4.57
13 14 3.373020 CATCAGCGAACTGTTGTGC 57.627 52.632 0.00 1.74 44.77 4.57
16 17 2.738314 TCATCACATCAGCGAACTGTTG 59.262 45.455 0.00 3.25 45.35 3.33
17 18 2.738846 GTCATCACATCAGCGAACTGTT 59.261 45.455 0.00 0.00 44.77 3.16
18 19 2.028658 AGTCATCACATCAGCGAACTGT 60.029 45.455 0.00 0.00 44.77 3.55
19 20 2.614779 AGTCATCACATCAGCGAACTG 58.385 47.619 0.00 0.00 45.95 3.16
20 21 4.428209 CTTAGTCATCACATCAGCGAACT 58.572 43.478 0.00 0.00 0.00 3.01
21 22 3.553511 CCTTAGTCATCACATCAGCGAAC 59.446 47.826 0.00 0.00 0.00 3.95
22 23 3.430790 CCCTTAGTCATCACATCAGCGAA 60.431 47.826 0.00 0.00 0.00 4.70
23 24 2.101415 CCCTTAGTCATCACATCAGCGA 59.899 50.000 0.00 0.00 0.00 4.93
24 25 2.101415 TCCCTTAGTCATCACATCAGCG 59.899 50.000 0.00 0.00 0.00 5.18
25 26 3.133721 AGTCCCTTAGTCATCACATCAGC 59.866 47.826 0.00 0.00 0.00 4.26
26 27 4.691175 CAGTCCCTTAGTCATCACATCAG 58.309 47.826 0.00 0.00 0.00 2.90
27 28 3.118629 GCAGTCCCTTAGTCATCACATCA 60.119 47.826 0.00 0.00 0.00 3.07
28 29 3.462021 GCAGTCCCTTAGTCATCACATC 58.538 50.000 0.00 0.00 0.00 3.06
29 30 2.171448 GGCAGTCCCTTAGTCATCACAT 59.829 50.000 0.00 0.00 0.00 3.21
30 31 1.555075 GGCAGTCCCTTAGTCATCACA 59.445 52.381 0.00 0.00 0.00 3.58
31 32 1.471676 CGGCAGTCCCTTAGTCATCAC 60.472 57.143 0.00 0.00 0.00 3.06
32 33 0.824109 CGGCAGTCCCTTAGTCATCA 59.176 55.000 0.00 0.00 0.00 3.07
33 34 1.112113 TCGGCAGTCCCTTAGTCATC 58.888 55.000 0.00 0.00 0.00 2.92
34 35 0.824759 GTCGGCAGTCCCTTAGTCAT 59.175 55.000 0.00 0.00 0.00 3.06
35 36 0.251653 AGTCGGCAGTCCCTTAGTCA 60.252 55.000 0.00 0.00 0.00 3.41
36 37 0.896226 AAGTCGGCAGTCCCTTAGTC 59.104 55.000 0.00 0.00 0.00 2.59
37 38 0.896226 GAAGTCGGCAGTCCCTTAGT 59.104 55.000 0.00 0.00 0.00 2.24
38 39 0.175989 GGAAGTCGGCAGTCCCTTAG 59.824 60.000 0.00 0.00 0.00 2.18
39 40 0.543410 TGGAAGTCGGCAGTCCCTTA 60.543 55.000 7.24 0.00 0.00 2.69
40 41 1.201429 ATGGAAGTCGGCAGTCCCTT 61.201 55.000 7.24 0.00 0.00 3.95
41 42 1.613630 ATGGAAGTCGGCAGTCCCT 60.614 57.895 7.24 0.00 0.00 4.20
42 43 1.153349 GATGGAAGTCGGCAGTCCC 60.153 63.158 7.24 0.00 0.00 4.46
43 44 0.250513 AAGATGGAAGTCGGCAGTCC 59.749 55.000 2.93 2.93 0.00 3.85
44 45 1.646189 GAAGATGGAAGTCGGCAGTC 58.354 55.000 0.00 0.00 0.00 3.51
45 46 0.108615 CGAAGATGGAAGTCGGCAGT 60.109 55.000 0.00 0.00 0.00 4.40
46 47 0.173481 TCGAAGATGGAAGTCGGCAG 59.827 55.000 0.00 0.00 35.51 4.85
47 48 0.173481 CTCGAAGATGGAAGTCGGCA 59.827 55.000 0.00 0.00 35.51 5.69
48 49 0.528684 CCTCGAAGATGGAAGTCGGC 60.529 60.000 0.00 0.00 35.51 5.54
49 50 1.066303 CTCCTCGAAGATGGAAGTCGG 59.934 57.143 0.00 0.00 34.45 4.79
50 51 1.746220 ACTCCTCGAAGATGGAAGTCG 59.254 52.381 0.00 0.00 34.45 4.18
51 52 3.878160 AACTCCTCGAAGATGGAAGTC 57.122 47.619 0.00 0.00 34.45 3.01
52 53 3.367498 CGAAACTCCTCGAAGATGGAAGT 60.367 47.826 0.00 0.00 41.44 3.01
53 54 3.182967 CGAAACTCCTCGAAGATGGAAG 58.817 50.000 0.00 0.00 41.44 3.46
54 55 2.561419 ACGAAACTCCTCGAAGATGGAA 59.439 45.455 0.00 0.00 41.44 3.53
55 56 2.168496 ACGAAACTCCTCGAAGATGGA 58.832 47.619 0.00 0.00 41.44 3.41
56 57 2.656560 ACGAAACTCCTCGAAGATGG 57.343 50.000 0.00 0.00 41.44 3.51
57 58 2.924290 GGAACGAAACTCCTCGAAGATG 59.076 50.000 0.00 0.00 41.44 2.90
58 59 2.561419 TGGAACGAAACTCCTCGAAGAT 59.439 45.455 0.00 0.00 41.44 2.40
59 60 1.958579 TGGAACGAAACTCCTCGAAGA 59.041 47.619 0.00 0.00 41.44 2.87
60 61 2.288273 ACTGGAACGAAACTCCTCGAAG 60.288 50.000 0.00 0.00 41.44 3.79
61 62 1.684983 ACTGGAACGAAACTCCTCGAA 59.315 47.619 0.00 0.00 41.44 3.71
62 63 1.268899 GACTGGAACGAAACTCCTCGA 59.731 52.381 0.00 0.00 41.44 4.04
63 64 1.269998 AGACTGGAACGAAACTCCTCG 59.730 52.381 0.00 0.00 44.50 4.63
64 65 2.559231 AGAGACTGGAACGAAACTCCTC 59.441 50.000 0.00 0.00 33.77 3.71
65 66 2.297597 CAGAGACTGGAACGAAACTCCT 59.702 50.000 0.00 0.00 33.77 3.69
66 67 2.678324 CAGAGACTGGAACGAAACTCC 58.322 52.381 0.00 0.00 0.00 3.85
67 68 2.062519 GCAGAGACTGGAACGAAACTC 58.937 52.381 0.00 0.00 31.21 3.01
68 69 1.603172 CGCAGAGACTGGAACGAAACT 60.603 52.381 0.00 0.00 31.21 2.66
69 70 0.784778 CGCAGAGACTGGAACGAAAC 59.215 55.000 0.00 0.00 31.21 2.78
70 71 0.387929 ACGCAGAGACTGGAACGAAA 59.612 50.000 0.00 0.00 31.21 3.46
71 72 0.039437 GACGCAGAGACTGGAACGAA 60.039 55.000 0.00 0.00 31.21 3.85
72 73 0.889638 AGACGCAGAGACTGGAACGA 60.890 55.000 0.00 0.00 31.21 3.85
73 74 0.455295 GAGACGCAGAGACTGGAACG 60.455 60.000 0.00 0.00 31.21 3.95
74 75 0.109039 GGAGACGCAGAGACTGGAAC 60.109 60.000 0.00 0.00 31.21 3.62
75 76 0.539669 TGGAGACGCAGAGACTGGAA 60.540 55.000 0.00 0.00 31.21 3.53
76 77 0.962855 CTGGAGACGCAGAGACTGGA 60.963 60.000 0.00 0.00 31.21 3.86
77 78 1.510383 CTGGAGACGCAGAGACTGG 59.490 63.158 0.00 0.00 31.21 4.00
78 79 1.153862 GCTGGAGACGCAGAGACTG 60.154 63.158 0.00 0.00 34.12 3.51
79 80 2.695759 CGCTGGAGACGCAGAGACT 61.696 63.158 0.00 0.00 0.00 3.24
80 81 2.202544 CGCTGGAGACGCAGAGAC 60.203 66.667 0.00 0.00 0.00 3.36
111 112 1.917336 TATTCAACACCCCCGCTCCC 61.917 60.000 0.00 0.00 0.00 4.30
112 113 0.182775 ATATTCAACACCCCCGCTCC 59.817 55.000 0.00 0.00 0.00 4.70
113 114 2.922740 TATATTCAACACCCCCGCTC 57.077 50.000 0.00 0.00 0.00 5.03
114 115 3.117663 ACAATATATTCAACACCCCCGCT 60.118 43.478 0.00 0.00 0.00 5.52
115 116 3.004315 CACAATATATTCAACACCCCCGC 59.996 47.826 0.00 0.00 0.00 6.13
116 117 4.204012 ACACAATATATTCAACACCCCCG 58.796 43.478 0.00 0.00 0.00 5.73
117 118 6.123651 TGTACACAATATATTCAACACCCCC 58.876 40.000 0.00 0.00 0.00 5.40
118 119 7.284489 ACATGTACACAATATATTCAACACCCC 59.716 37.037 0.00 0.00 0.00 4.95
119 120 8.220755 ACATGTACACAATATATTCAACACCC 57.779 34.615 0.00 0.00 0.00 4.61
132 133 9.665719 TCAAGACACAATATACATGTACACAAT 57.334 29.630 7.96 0.00 0.00 2.71
133 134 9.150348 CTCAAGACACAATATACATGTACACAA 57.850 33.333 7.96 0.00 0.00 3.33
134 135 7.277760 GCTCAAGACACAATATACATGTACACA 59.722 37.037 7.96 0.00 0.00 3.72
135 136 7.254455 GGCTCAAGACACAATATACATGTACAC 60.254 40.741 7.96 0.00 0.00 2.90
136 137 6.761242 GGCTCAAGACACAATATACATGTACA 59.239 38.462 7.96 0.00 0.00 2.90
137 138 6.202954 GGGCTCAAGACACAATATACATGTAC 59.797 42.308 7.96 0.00 0.00 2.90
138 139 6.126911 TGGGCTCAAGACACAATATACATGTA 60.127 38.462 8.27 8.27 0.00 2.29
139 140 5.126067 GGGCTCAAGACACAATATACATGT 58.874 41.667 2.69 2.69 0.00 3.21
140 141 5.008019 GTGGGCTCAAGACACAATATACATG 59.992 44.000 0.00 0.00 35.30 3.21
141 142 5.126067 GTGGGCTCAAGACACAATATACAT 58.874 41.667 0.00 0.00 35.30 2.29
142 143 4.513442 GTGGGCTCAAGACACAATATACA 58.487 43.478 0.00 0.00 35.30 2.29
143 144 3.877508 GGTGGGCTCAAGACACAATATAC 59.122 47.826 0.00 0.00 36.87 1.47
144 145 3.780294 AGGTGGGCTCAAGACACAATATA 59.220 43.478 0.00 0.00 36.87 0.86
145 146 2.578021 AGGTGGGCTCAAGACACAATAT 59.422 45.455 0.00 0.00 36.87 1.28
146 147 1.985159 AGGTGGGCTCAAGACACAATA 59.015 47.619 0.00 0.00 36.87 1.90
147 148 0.773644 AGGTGGGCTCAAGACACAAT 59.226 50.000 0.00 0.00 36.87 2.71
148 149 0.108585 GAGGTGGGCTCAAGACACAA 59.891 55.000 0.00 0.00 36.87 3.33
149 150 1.754745 GAGGTGGGCTCAAGACACA 59.245 57.895 0.00 0.00 36.87 3.72
150 151 1.003233 GGAGGTGGGCTCAAGACAC 60.003 63.158 0.00 0.00 0.00 3.67
151 152 0.116342 TAGGAGGTGGGCTCAAGACA 59.884 55.000 0.00 0.00 0.00 3.41
152 153 0.827368 CTAGGAGGTGGGCTCAAGAC 59.173 60.000 0.00 0.00 0.00 3.01
153 154 0.413832 ACTAGGAGGTGGGCTCAAGA 59.586 55.000 0.00 0.00 0.00 3.02
154 155 1.208293 GAACTAGGAGGTGGGCTCAAG 59.792 57.143 0.00 0.00 0.00 3.02
155 156 1.276622 GAACTAGGAGGTGGGCTCAA 58.723 55.000 0.00 0.00 0.00 3.02
156 157 0.116342 TGAACTAGGAGGTGGGCTCA 59.884 55.000 0.00 0.00 0.00 4.26
157 158 1.501582 ATGAACTAGGAGGTGGGCTC 58.498 55.000 0.00 0.00 0.00 4.70
158 159 2.868964 TATGAACTAGGAGGTGGGCT 57.131 50.000 0.00 0.00 0.00 5.19
159 160 2.706190 ACATATGAACTAGGAGGTGGGC 59.294 50.000 10.38 0.00 0.00 5.36
160 161 6.954684 ACTATACATATGAACTAGGAGGTGGG 59.045 42.308 10.38 0.00 0.00 4.61
161 162 8.307483 CAACTATACATATGAACTAGGAGGTGG 58.693 40.741 10.38 0.00 0.00 4.61
162 163 9.078990 TCAACTATACATATGAACTAGGAGGTG 57.921 37.037 10.38 5.64 0.00 4.00
163 164 9.303116 CTCAACTATACATATGAACTAGGAGGT 57.697 37.037 10.38 0.00 0.00 3.85
164 165 8.744652 CCTCAACTATACATATGAACTAGGAGG 58.255 40.741 10.38 12.35 0.00 4.30
165 166 9.303116 ACCTCAACTATACATATGAACTAGGAG 57.697 37.037 10.38 7.64 0.00 3.69
166 167 9.656323 AACCTCAACTATACATATGAACTAGGA 57.344 33.333 10.38 0.00 0.00 2.94
167 168 9.698309 CAACCTCAACTATACATATGAACTAGG 57.302 37.037 10.38 7.30 0.00 3.02
170 171 7.987458 CCACAACCTCAACTATACATATGAACT 59.013 37.037 10.38 0.00 0.00 3.01
171 172 7.254795 GCCACAACCTCAACTATACATATGAAC 60.255 40.741 10.38 0.00 0.00 3.18
172 173 6.765989 GCCACAACCTCAACTATACATATGAA 59.234 38.462 10.38 0.00 0.00 2.57
173 174 6.288294 GCCACAACCTCAACTATACATATGA 58.712 40.000 10.38 0.00 0.00 2.15
174 175 5.470098 GGCCACAACCTCAACTATACATATG 59.530 44.000 0.00 0.00 0.00 1.78
175 176 5.456186 GGGCCACAACCTCAACTATACATAT 60.456 44.000 4.39 0.00 0.00 1.78
176 177 4.141574 GGGCCACAACCTCAACTATACATA 60.142 45.833 4.39 0.00 0.00 2.29
177 178 3.371595 GGGCCACAACCTCAACTATACAT 60.372 47.826 4.39 0.00 0.00 2.29
178 179 2.026636 GGGCCACAACCTCAACTATACA 60.027 50.000 4.39 0.00 0.00 2.29
179 180 2.640184 GGGCCACAACCTCAACTATAC 58.360 52.381 4.39 0.00 0.00 1.47
180 181 1.562475 GGGGCCACAACCTCAACTATA 59.438 52.381 4.39 0.00 0.00 1.31
181 182 0.331616 GGGGCCACAACCTCAACTAT 59.668 55.000 4.39 0.00 0.00 2.12
182 183 1.765074 GGGGCCACAACCTCAACTA 59.235 57.895 4.39 0.00 0.00 2.24
183 184 2.520968 GGGGCCACAACCTCAACT 59.479 61.111 4.39 0.00 0.00 3.16
184 185 2.600470 GGGGGCCACAACCTCAAC 60.600 66.667 7.65 0.00 0.00 3.18
185 186 2.780924 AGGGGGCCACAACCTCAA 60.781 61.111 9.35 0.00 0.00 3.02
188 189 2.798760 TATGGAGGGGGCCACAACCT 62.799 60.000 19.80 13.14 41.56 3.50
189 190 2.313427 TATGGAGGGGGCCACAACC 61.313 63.158 9.35 12.18 41.56 3.77
190 191 1.076995 GTATGGAGGGGGCCACAAC 60.077 63.158 9.35 0.00 41.56 3.32
191 192 0.923729 ATGTATGGAGGGGGCCACAA 60.924 55.000 9.35 0.00 41.56 3.33
192 193 1.308657 ATGTATGGAGGGGGCCACA 60.309 57.895 9.35 0.00 41.56 4.17
193 194 1.352622 TGATGTATGGAGGGGGCCAC 61.353 60.000 4.39 0.00 41.56 5.01
194 195 0.403304 ATGATGTATGGAGGGGGCCA 60.403 55.000 4.39 0.00 43.23 5.36
195 196 1.668826 TATGATGTATGGAGGGGGCC 58.331 55.000 0.00 0.00 0.00 5.80
196 197 5.606749 TGTATATATGATGTATGGAGGGGGC 59.393 44.000 0.00 0.00 0.00 5.80
197 198 7.683578 CATGTATATATGATGTATGGAGGGGG 58.316 42.308 3.48 0.00 0.00 5.40
198 199 7.164122 GCATGTATATATGATGTATGGAGGGG 58.836 42.308 13.18 0.00 0.00 4.79
199 200 7.016957 AGGCATGTATATATGATGTATGGAGGG 59.983 40.741 13.18 0.00 0.00 4.30
200 201 7.876582 CAGGCATGTATATATGATGTATGGAGG 59.123 40.741 13.18 0.00 0.00 4.30
201 202 7.876582 CCAGGCATGTATATATGATGTATGGAG 59.123 40.741 13.18 0.00 31.59 3.86
202 203 7.348011 ACCAGGCATGTATATATGATGTATGGA 59.652 37.037 22.41 0.00 33.02 3.41
203 204 7.443272 CACCAGGCATGTATATATGATGTATGG 59.557 40.741 13.18 18.45 34.03 2.74
204 205 7.041576 GCACCAGGCATGTATATATGATGTATG 60.042 40.741 13.18 10.91 43.97 2.39
205 206 6.994496 GCACCAGGCATGTATATATGATGTAT 59.006 38.462 13.18 0.29 43.97 2.29
206 207 6.348498 GCACCAGGCATGTATATATGATGTA 58.652 40.000 13.18 0.00 43.97 2.29
207 208 5.188434 GCACCAGGCATGTATATATGATGT 58.812 41.667 13.18 1.76 43.97 3.06
208 209 5.746307 GCACCAGGCATGTATATATGATG 57.254 43.478 13.18 9.98 43.97 3.07
222 223 1.926511 CTTTGATCGGTGCACCAGGC 61.927 60.000 34.16 21.79 45.13 4.85
223 224 1.926511 GCTTTGATCGGTGCACCAGG 61.927 60.000 34.16 19.77 35.14 4.45
224 225 1.236616 TGCTTTGATCGGTGCACCAG 61.237 55.000 34.16 25.45 35.14 4.00
225 226 0.821301 TTGCTTTGATCGGTGCACCA 60.821 50.000 34.16 21.66 35.01 4.17
226 227 0.527565 ATTGCTTTGATCGGTGCACC 59.472 50.000 26.78 26.78 35.01 5.01
227 228 1.987770 CAATTGCTTTGATCGGTGCAC 59.012 47.619 8.80 8.80 37.53 4.57
228 229 1.612950 ACAATTGCTTTGATCGGTGCA 59.387 42.857 5.05 2.83 38.76 4.57
229 230 1.987770 CACAATTGCTTTGATCGGTGC 59.012 47.619 5.05 0.00 38.76 5.01
230 231 3.287312 ACACAATTGCTTTGATCGGTG 57.713 42.857 5.05 0.00 38.76 4.94
231 232 3.641648 CAACACAATTGCTTTGATCGGT 58.358 40.909 5.05 0.00 38.76 4.69
232 233 2.409378 GCAACACAATTGCTTTGATCGG 59.591 45.455 19.07 0.00 41.87 4.18
233 234 3.051327 TGCAACACAATTGCTTTGATCG 58.949 40.909 19.07 2.55 45.13 3.69
234 235 3.803231 TGTGCAACACAATTGCTTTGATC 59.197 39.130 19.07 12.45 45.67 2.92
235 236 3.794717 TGTGCAACACAATTGCTTTGAT 58.205 36.364 19.07 0.00 45.67 2.57
236 237 3.188492 CTGTGCAACACAATTGCTTTGA 58.812 40.909 19.07 6.00 45.67 2.69
237 238 2.285950 GCTGTGCAACACAATTGCTTTG 60.286 45.455 5.05 10.05 45.67 2.77
238 239 1.935199 GCTGTGCAACACAATTGCTTT 59.065 42.857 5.05 0.00 45.67 3.51
239 240 1.134759 TGCTGTGCAACACAATTGCTT 60.135 42.857 5.05 0.00 45.67 3.91
240 241 0.460722 TGCTGTGCAACACAATTGCT 59.539 45.000 5.05 0.00 45.67 3.91
241 242 1.504359 ATGCTGTGCAACACAATTGC 58.496 45.000 5.05 4.68 45.67 3.56
242 243 2.477375 GGAATGCTGTGCAACACAATTG 59.523 45.455 3.24 3.24 45.67 2.32
243 244 2.102757 TGGAATGCTGTGCAACACAATT 59.897 40.909 1.64 0.06 45.67 2.32
244 245 1.687660 TGGAATGCTGTGCAACACAAT 59.312 42.857 1.64 0.00 45.67 2.71
245 246 1.067364 CTGGAATGCTGTGCAACACAA 59.933 47.619 1.64 0.00 45.67 3.33
246 247 0.669619 CTGGAATGCTGTGCAACACA 59.330 50.000 0.00 0.00 45.67 3.72
247 248 0.670162 ACTGGAATGCTGTGCAACAC 59.330 50.000 0.00 0.00 45.67 3.32
249 250 1.242076 AGACTGGAATGCTGTGCAAC 58.758 50.000 0.00 0.00 43.62 4.17
250 251 1.881973 GAAGACTGGAATGCTGTGCAA 59.118 47.619 0.00 0.00 43.62 4.08
251 252 1.527034 GAAGACTGGAATGCTGTGCA 58.473 50.000 0.00 0.00 44.86 4.57
252 253 0.807496 GGAAGACTGGAATGCTGTGC 59.193 55.000 0.00 0.00 0.00 4.57
253 254 1.808945 GTGGAAGACTGGAATGCTGTG 59.191 52.381 0.00 0.00 0.00 3.66
254 255 1.421268 TGTGGAAGACTGGAATGCTGT 59.579 47.619 0.00 0.00 0.00 4.40
255 256 2.189594 TGTGGAAGACTGGAATGCTG 57.810 50.000 0.00 0.00 0.00 4.41
256 257 2.158623 TGTTGTGGAAGACTGGAATGCT 60.159 45.455 0.00 0.00 0.00 3.79
257 258 2.229792 TGTTGTGGAAGACTGGAATGC 58.770 47.619 0.00 0.00 0.00 3.56
258 259 4.136796 TCTTGTTGTGGAAGACTGGAATG 58.863 43.478 0.00 0.00 0.00 2.67
259 260 4.141390 ACTCTTGTTGTGGAAGACTGGAAT 60.141 41.667 0.00 0.00 0.00 3.01
260 261 3.199946 ACTCTTGTTGTGGAAGACTGGAA 59.800 43.478 0.00 0.00 0.00 3.53
261 262 2.771943 ACTCTTGTTGTGGAAGACTGGA 59.228 45.455 0.00 0.00 0.00 3.86
262 263 3.199880 ACTCTTGTTGTGGAAGACTGG 57.800 47.619 0.00 0.00 0.00 4.00
263 264 4.542662 CAACTCTTGTTGTGGAAGACTG 57.457 45.455 1.22 0.00 46.08 3.51
272 273 6.606456 GCTCCTAGCCTCAACTCTTGTTGT 62.606 50.000 8.47 0.00 43.40 3.32
273 274 4.172073 GCTCCTAGCCTCAACTCTTGTTG 61.172 52.174 2.83 2.83 43.83 3.33
274 275 2.027653 GCTCCTAGCCTCAACTCTTGTT 60.028 50.000 0.00 0.00 34.48 2.83
275 276 1.552792 GCTCCTAGCCTCAACTCTTGT 59.447 52.381 0.00 0.00 34.48 3.16
276 277 1.552337 TGCTCCTAGCCTCAACTCTTG 59.448 52.381 0.00 0.00 41.51 3.02
277 278 1.944177 TGCTCCTAGCCTCAACTCTT 58.056 50.000 0.00 0.00 41.51 2.85
278 279 1.944177 TTGCTCCTAGCCTCAACTCT 58.056 50.000 0.00 0.00 41.51 3.24
279 280 2.169352 TCATTGCTCCTAGCCTCAACTC 59.831 50.000 0.00 0.00 41.51 3.01
280 281 2.170187 CTCATTGCTCCTAGCCTCAACT 59.830 50.000 0.00 0.00 41.51 3.16
281 282 2.559440 CTCATTGCTCCTAGCCTCAAC 58.441 52.381 0.00 0.00 41.51 3.18
282 283 1.134280 GCTCATTGCTCCTAGCCTCAA 60.134 52.381 0.00 0.00 41.51 3.02
283 284 0.467384 GCTCATTGCTCCTAGCCTCA 59.533 55.000 0.00 0.00 41.51 3.86
284 285 3.304041 GCTCATTGCTCCTAGCCTC 57.696 57.895 0.00 0.00 41.51 4.70
294 295 3.022607 ACTTTTGCTTCAGCTCATTGC 57.977 42.857 0.00 0.00 42.66 3.56
295 296 4.022935 TGGTACTTTTGCTTCAGCTCATTG 60.023 41.667 0.00 0.00 42.66 2.82
296 297 4.144297 TGGTACTTTTGCTTCAGCTCATT 58.856 39.130 0.00 0.00 42.66 2.57
297 298 3.754965 TGGTACTTTTGCTTCAGCTCAT 58.245 40.909 0.00 0.00 42.66 2.90
298 299 3.207265 TGGTACTTTTGCTTCAGCTCA 57.793 42.857 0.00 0.00 42.66 4.26
299 300 3.315191 TGTTGGTACTTTTGCTTCAGCTC 59.685 43.478 0.00 0.00 42.66 4.09
300 301 3.066760 GTGTTGGTACTTTTGCTTCAGCT 59.933 43.478 0.00 0.00 42.66 4.24
301 302 3.181491 TGTGTTGGTACTTTTGCTTCAGC 60.181 43.478 0.00 0.00 42.50 4.26
302 303 4.630894 TGTGTTGGTACTTTTGCTTCAG 57.369 40.909 0.00 0.00 0.00 3.02
303 304 6.701145 TTATGTGTTGGTACTTTTGCTTCA 57.299 33.333 0.00 0.00 0.00 3.02
304 305 7.995463 TTTTATGTGTTGGTACTTTTGCTTC 57.005 32.000 0.00 0.00 0.00 3.86
341 342 9.229784 GCAATGAGAAATGTTAGTATTCACATG 57.770 33.333 0.00 0.00 35.51 3.21
361 362 4.012138 TCGTCTCCGAGGCAATGA 57.988 55.556 0.03 0.00 38.40 2.57
370 371 2.251893 GCAAGTACTTTCTCGTCTCCG 58.748 52.381 5.07 0.00 0.00 4.63
371 372 3.299340 TGCAAGTACTTTCTCGTCTCC 57.701 47.619 5.07 0.00 0.00 3.71
402 403 4.149598 ACTTAAATCACCCGAGCCTTTTT 58.850 39.130 0.00 0.00 0.00 1.94
466 809 7.281549 TGAAAAGGTTAACTTCTAAGACACACC 59.718 37.037 5.42 0.00 38.85 4.16
542 885 9.826574 AAAGCTTATGATGATATTGCACAAATT 57.173 25.926 0.00 0.00 0.00 1.82
543 886 9.256477 CAAAGCTTATGATGATATTGCACAAAT 57.744 29.630 0.00 0.00 0.00 2.32
544 887 8.252417 ACAAAGCTTATGATGATATTGCACAAA 58.748 29.630 0.00 0.00 0.00 2.83
545 888 7.774134 ACAAAGCTTATGATGATATTGCACAA 58.226 30.769 0.00 0.00 0.00 3.33
546 889 7.067251 TGACAAAGCTTATGATGATATTGCACA 59.933 33.333 0.00 0.00 0.00 4.57
547 890 7.420002 TGACAAAGCTTATGATGATATTGCAC 58.580 34.615 0.00 0.00 0.00 4.57
548 891 7.571080 TGACAAAGCTTATGATGATATTGCA 57.429 32.000 0.00 0.00 0.00 4.08
549 892 9.770503 CTATGACAAAGCTTATGATGATATTGC 57.229 33.333 0.00 0.00 0.00 3.56
551 894 8.954350 GCCTATGACAAAGCTTATGATGATATT 58.046 33.333 0.00 0.00 0.00 1.28
553 896 7.683578 AGCCTATGACAAAGCTTATGATGATA 58.316 34.615 0.00 0.78 29.27 2.15
555 898 5.933617 AGCCTATGACAAAGCTTATGATGA 58.066 37.500 0.00 0.00 29.27 2.92
556 899 7.734924 TTAGCCTATGACAAAGCTTATGATG 57.265 36.000 0.00 0.00 36.79 3.07
558 901 9.658799 GATATTAGCCTATGACAAAGCTTATGA 57.341 33.333 0.00 0.00 36.79 2.15
561 904 7.892609 TCGATATTAGCCTATGACAAAGCTTA 58.107 34.615 0.00 0.00 36.79 3.09
577 1406 5.100259 ACGCCATCGGTAATTCGATATTAG 58.900 41.667 2.11 0.00 46.59 1.73
593 1422 0.106708 TCCTGCCAAGATACGCCATC 59.893 55.000 0.00 0.00 0.00 3.51
597 1426 0.940126 CACATCCTGCCAAGATACGC 59.060 55.000 0.00 0.00 0.00 4.42
599 1428 4.408182 ACTACACATCCTGCCAAGATAC 57.592 45.455 0.00 0.00 0.00 2.24
777 1966 2.663119 GCTTTCATTTGCCACGAACATC 59.337 45.455 0.00 0.00 0.00 3.06
779 1968 1.406898 TGCTTTCATTTGCCACGAACA 59.593 42.857 0.00 0.00 0.00 3.18
780 1969 1.786579 GTGCTTTCATTTGCCACGAAC 59.213 47.619 0.00 0.00 0.00 3.95
789 1978 0.673437 CGGGTGTGGTGCTTTCATTT 59.327 50.000 0.00 0.00 0.00 2.32
796 1985 4.619227 CCGTTCGGGTGTGGTGCT 62.619 66.667 3.04 0.00 0.00 4.40
938 2141 3.876589 GAGTTGTTGGCGCGAGGGA 62.877 63.158 12.10 0.00 0.00 4.20
946 2150 1.106285 GATGGGATGGAGTTGTTGGC 58.894 55.000 0.00 0.00 0.00 4.52
961 2165 1.440893 CGCTGAGGGAGTGAGATGG 59.559 63.158 0.00 0.00 33.59 3.51
964 2168 1.908299 TTGCGCTGAGGGAGTGAGA 60.908 57.895 9.73 0.00 33.59 3.27
965 2169 1.739562 GTTGCGCTGAGGGAGTGAG 60.740 63.158 9.73 0.00 33.59 3.51
966 2170 2.343758 GTTGCGCTGAGGGAGTGA 59.656 61.111 9.73 0.00 33.59 3.41
968 2172 2.031163 GTGTTGCGCTGAGGGAGT 59.969 61.111 9.73 0.00 0.00 3.85
969 2173 2.031012 TGTGTTGCGCTGAGGGAG 59.969 61.111 9.73 0.00 0.00 4.30
970 2174 2.031012 CTGTGTTGCGCTGAGGGA 59.969 61.111 9.73 0.00 0.00 4.20
971 2175 2.031012 TCTGTGTTGCGCTGAGGG 59.969 61.111 9.73 0.00 0.00 4.30
972 2176 2.320587 GGTCTGTGTTGCGCTGAGG 61.321 63.158 9.73 0.00 0.00 3.86
973 2177 1.287730 GAGGTCTGTGTTGCGCTGAG 61.288 60.000 9.73 0.00 0.00 3.35
974 2178 1.300931 GAGGTCTGTGTTGCGCTGA 60.301 57.895 9.73 0.00 0.00 4.26
997 2201 2.618241 GAGATGAGACGAGAGATGTGCT 59.382 50.000 0.00 0.00 0.00 4.40
998 2202 2.601979 CGAGATGAGACGAGAGATGTGC 60.602 54.545 0.00 0.00 0.00 4.57
999 2203 2.611751 ACGAGATGAGACGAGAGATGTG 59.388 50.000 0.00 0.00 0.00 3.21
1000 2204 2.869801 GACGAGATGAGACGAGAGATGT 59.130 50.000 0.00 0.00 0.00 3.06
1001 2205 3.130633 AGACGAGATGAGACGAGAGATG 58.869 50.000 0.00 0.00 0.00 2.90
1002 2206 3.390135 GAGACGAGATGAGACGAGAGAT 58.610 50.000 0.00 0.00 0.00 2.75
1003 2207 2.796735 CGAGACGAGATGAGACGAGAGA 60.797 54.545 0.00 0.00 0.00 3.10
1004 2208 1.521006 CGAGACGAGATGAGACGAGAG 59.479 57.143 0.00 0.00 0.00 3.20
1005 2209 1.562017 CGAGACGAGATGAGACGAGA 58.438 55.000 0.00 0.00 0.00 4.04
1006 2210 0.042535 GCGAGACGAGATGAGACGAG 60.043 60.000 0.00 0.00 0.00 4.18
1007 2211 1.429927 GGCGAGACGAGATGAGACGA 61.430 60.000 0.00 0.00 0.00 4.20
1008 2212 1.010574 GGCGAGACGAGATGAGACG 60.011 63.158 0.00 0.00 0.00 4.18
1009 2213 1.010574 CGGCGAGACGAGATGAGAC 60.011 63.158 0.00 0.00 35.47 3.36
1010 2214 1.449778 ACGGCGAGACGAGATGAGA 60.450 57.895 16.62 0.00 37.61 3.27
1011 2215 1.297967 CACGGCGAGACGAGATGAG 60.298 63.158 16.62 0.00 37.61 2.90
1012 2216 2.791927 CACGGCGAGACGAGATGA 59.208 61.111 16.62 0.00 37.61 2.92
1013 2217 2.951745 GCACGGCGAGACGAGATG 60.952 66.667 16.62 0.00 37.61 2.90
1024 2238 3.712881 GTCCACTGAACGCACGGC 61.713 66.667 0.00 0.00 0.00 5.68
1029 2243 1.444553 CCTCGAGTCCACTGAACGC 60.445 63.158 12.31 0.00 0.00 4.84
1039 2253 1.578206 GCTGGGTTTTGCCTCGAGTC 61.578 60.000 12.31 0.00 37.43 3.36
1101 2317 1.076485 GGATGCTGAGGGTGCCATT 60.076 57.895 0.00 0.00 0.00 3.16
1110 2326 0.036010 AGGAAACCACGGATGCTGAG 60.036 55.000 0.00 0.00 0.00 3.35
1122 2338 2.436115 CGGGCGGAGAAGGAAACC 60.436 66.667 0.00 0.00 0.00 3.27
1239 2455 2.923035 CCAGACCACCCGACCAGT 60.923 66.667 0.00 0.00 0.00 4.00
1254 2470 1.183030 CCATATAGTCCGCCCGTCCA 61.183 60.000 0.00 0.00 0.00 4.02
1257 2473 0.898789 CCTCCATATAGTCCGCCCGT 60.899 60.000 0.00 0.00 0.00 5.28
1302 2521 0.882474 CGAACGTCTTCTCCTCCACT 59.118 55.000 0.00 0.00 0.00 4.00
1304 2523 0.879765 GACGAACGTCTTCTCCTCCA 59.120 55.000 18.12 0.00 41.57 3.86
1441 2660 2.551912 CGTTGGTTGGTGGCTGGTC 61.552 63.158 0.00 0.00 0.00 4.02
1485 2704 1.666700 GTACAAACGCACTGAACACCA 59.333 47.619 0.00 0.00 0.00 4.17
1486 2705 1.666700 TGTACAAACGCACTGAACACC 59.333 47.619 0.00 0.00 0.00 4.16
1487 2706 3.602390 ATGTACAAACGCACTGAACAC 57.398 42.857 0.00 0.00 0.00 3.32
1499 2718 5.350365 GGCGAGAAACATGACTATGTACAAA 59.650 40.000 0.00 0.00 46.54 2.83
1510 2729 1.005037 AGCACGGCGAGAAACATGA 60.005 52.632 16.62 0.00 0.00 3.07
1548 2767 3.219189 CGTATTCACATCTAGCGTCTCG 58.781 50.000 0.00 0.00 0.00 4.04
1549 2768 3.556513 CCGTATTCACATCTAGCGTCTC 58.443 50.000 0.00 0.00 0.00 3.36
1550 2769 2.293677 CCCGTATTCACATCTAGCGTCT 59.706 50.000 0.00 0.00 0.00 4.18
1551 2770 2.292569 TCCCGTATTCACATCTAGCGTC 59.707 50.000 0.00 0.00 0.00 5.19
1552 2771 2.293677 CTCCCGTATTCACATCTAGCGT 59.706 50.000 0.00 0.00 0.00 5.07
1553 2772 2.351835 CCTCCCGTATTCACATCTAGCG 60.352 54.545 0.00 0.00 0.00 4.26
1554 2773 2.028930 CCCTCCCGTATTCACATCTAGC 60.029 54.545 0.00 0.00 0.00 3.42
1697 2919 5.869344 GCTCTCTCACAACACAACACATATA 59.131 40.000 0.00 0.00 0.00 0.86
1706 2928 2.309528 AAACGCTCTCTCACAACACA 57.690 45.000 0.00 0.00 0.00 3.72
1717 2939 1.692519 ACCCAAGTCTGTAAACGCTCT 59.307 47.619 0.00 0.00 0.00 4.09
1721 2943 4.573201 TCTGAAAACCCAAGTCTGTAAACG 59.427 41.667 0.00 0.00 0.00 3.60
1730 2952 3.771216 AGCATCATCTGAAAACCCAAGT 58.229 40.909 0.00 0.00 0.00 3.16
1734 2956 4.517285 TGACTAGCATCATCTGAAAACCC 58.483 43.478 0.00 0.00 0.00 4.11
1740 2962 6.047231 CACTCAATTGACTAGCATCATCTGA 58.953 40.000 3.38 0.00 0.00 3.27
1751 2973 7.506114 GGTATCCCATTACACTCAATTGACTA 58.494 38.462 3.38 0.00 0.00 2.59
1752 2974 6.357367 GGTATCCCATTACACTCAATTGACT 58.643 40.000 3.38 0.00 0.00 3.41
1758 2980 2.769663 AGCGGTATCCCATTACACTCAA 59.230 45.455 0.00 0.00 0.00 3.02
1776 2998 2.440539 AAATCCGTAGCCTGATAGCG 57.559 50.000 0.00 0.00 38.01 4.26
1777 2999 5.578727 CAGAATAAATCCGTAGCCTGATAGC 59.421 44.000 0.00 0.00 0.00 2.97
1778 3000 6.071334 TCCAGAATAAATCCGTAGCCTGATAG 60.071 42.308 0.00 0.00 0.00 2.08
1779 3001 5.778241 TCCAGAATAAATCCGTAGCCTGATA 59.222 40.000 0.00 0.00 0.00 2.15
1780 3002 4.593206 TCCAGAATAAATCCGTAGCCTGAT 59.407 41.667 0.00 0.00 0.00 2.90
1781 3003 3.964688 TCCAGAATAAATCCGTAGCCTGA 59.035 43.478 0.00 0.00 0.00 3.86
1782 3004 4.336889 TCCAGAATAAATCCGTAGCCTG 57.663 45.455 0.00 0.00 0.00 4.85
1783 3005 4.841246 AGATCCAGAATAAATCCGTAGCCT 59.159 41.667 0.00 0.00 0.00 4.58
1789 3011 5.220710 ACTCCAGATCCAGAATAAATCCG 57.779 43.478 0.00 0.00 0.00 4.18
1831 3053 7.251321 TCACAGGGGTATTGCATTTTATTTT 57.749 32.000 0.00 0.00 0.00 1.82
1835 3057 4.099266 GCATCACAGGGGTATTGCATTTTA 59.901 41.667 0.00 0.00 35.37 1.52
1852 3079 3.692257 AGGGCATCACTATAGCATCAC 57.308 47.619 0.00 0.00 0.00 3.06
2134 3365 1.138247 GTACGCCGGAGTCGTCATT 59.862 57.895 16.27 0.00 37.98 2.57
2135 3366 2.796651 GTACGCCGGAGTCGTCAT 59.203 61.111 16.27 0.00 37.98 3.06
2338 3569 4.217334 TCTTTCGCAACAAATCCATTAGCA 59.783 37.500 0.00 0.00 0.00 3.49
2388 3619 3.604875 AACACGATCGTAGAAACCCAT 57.395 42.857 22.26 0.00 43.58 4.00
2431 3662 7.193595 CAGGAATCTACGTTTTGTGAAAAACT 58.806 34.615 11.15 3.20 39.74 2.66
2544 3776 7.496591 CACAGTTTTACCAGTACTAGTTTTCCA 59.503 37.037 0.00 0.00 0.00 3.53
2615 3847 7.823799 TCAGAATCATTGCAGTATCAGTGTAAA 59.176 33.333 0.00 0.00 27.40 2.01
2616 3848 7.330262 TCAGAATCATTGCAGTATCAGTGTAA 58.670 34.615 0.00 0.00 0.00 2.41
2621 3853 9.216117 TGATTATCAGAATCATTGCAGTATCAG 57.784 33.333 0.00 0.00 32.21 2.90
2622 3854 9.563748 TTGATTATCAGAATCATTGCAGTATCA 57.436 29.630 0.00 0.00 36.63 2.15
2623 3855 9.823098 GTTGATTATCAGAATCATTGCAGTATC 57.177 33.333 0.00 0.00 36.63 2.24
2626 3858 6.832384 AGGTTGATTATCAGAATCATTGCAGT 59.168 34.615 0.00 0.00 36.63 4.40
2629 3861 7.303998 GCTAGGTTGATTATCAGAATCATTGC 58.696 38.462 0.00 0.00 36.63 3.56
2642 3874 6.590068 AGAGTAGACTACGCTAGGTTGATTA 58.410 40.000 16.26 0.00 37.05 1.75
2675 3928 3.555117 ACCTCAGGTAACCTCAGGTTA 57.445 47.619 12.72 12.72 44.94 2.85
2677 3930 1.978580 CAACCTCAGGTAACCTCAGGT 59.021 52.381 0.00 0.00 41.06 4.00
2678 3931 2.234908 CTCAACCTCAGGTAACCTCAGG 59.765 54.545 0.00 0.00 33.12 3.86
2679 3932 2.234908 CCTCAACCTCAGGTAACCTCAG 59.765 54.545 0.00 0.00 33.12 3.35
2680 3933 2.257207 CCTCAACCTCAGGTAACCTCA 58.743 52.381 0.00 0.00 33.12 3.86
2681 3934 1.066071 GCCTCAACCTCAGGTAACCTC 60.066 57.143 0.00 0.00 33.12 3.85
2682 3935 0.984995 GCCTCAACCTCAGGTAACCT 59.015 55.000 0.00 0.00 33.12 3.50
2683 3936 0.690762 TGCCTCAACCTCAGGTAACC 59.309 55.000 0.00 0.00 33.12 2.85
2684 3937 1.339151 CCTGCCTCAACCTCAGGTAAC 60.339 57.143 0.00 0.00 41.76 2.50
2685 3938 0.984230 CCTGCCTCAACCTCAGGTAA 59.016 55.000 0.00 0.00 41.76 2.85
2686 3939 2.683916 CCTGCCTCAACCTCAGGTA 58.316 57.895 0.00 0.00 41.76 3.08
2698 3951 0.692476 TCACTATGCACAACCTGCCT 59.308 50.000 0.00 0.00 46.51 4.75
2763 4022 1.555075 ACTTATGAGACGCATGGGTGT 59.445 47.619 21.40 16.95 41.32 4.16
2765 4024 2.111384 AGACTTATGAGACGCATGGGT 58.889 47.619 16.23 16.23 37.87 4.51
2766 4025 2.477825 CAGACTTATGAGACGCATGGG 58.522 52.381 8.44 8.44 37.87 4.00
2769 4028 5.048364 GTCTATCCAGACTTATGAGACGCAT 60.048 44.000 0.00 0.00 46.56 4.73
2770 4029 4.276183 GTCTATCCAGACTTATGAGACGCA 59.724 45.833 0.00 0.00 46.56 5.24
2771 4030 4.789784 GTCTATCCAGACTTATGAGACGC 58.210 47.826 0.00 0.00 46.56 5.19
2811 4070 6.803807 GCCTATCTGAGTCAAAATTTTGTGAC 59.196 38.462 25.98 19.39 43.70 3.67
2817 4076 3.378427 GGCGCCTATCTGAGTCAAAATTT 59.622 43.478 22.15 0.00 0.00 1.82
2824 4083 0.747255 TTGAGGCGCCTATCTGAGTC 59.253 55.000 32.97 15.50 0.00 3.36
2827 4086 0.179111 CGTTTGAGGCGCCTATCTGA 60.179 55.000 32.97 11.32 0.00 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.