Multiple sequence alignment - TraesCS1A01G111900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G111900 chr1A 100.000 5178 0 0 1 5178 113542488 113537311 0.000000e+00 9563.0
1 TraesCS1A01G111900 chr1A 83.231 489 71 8 1 487 245123995 245123516 6.160000e-119 438.0
2 TraesCS1A01G111900 chr1D 91.127 2874 170 35 1 2826 109820054 109817218 0.000000e+00 3816.0
3 TraesCS1A01G111900 chr1D 93.306 1449 66 7 2898 4318 109817218 109815773 0.000000e+00 2109.0
4 TraesCS1A01G111900 chr1D 93.778 450 24 3 4504 4951 109815692 109815245 0.000000e+00 673.0
5 TraesCS1A01G111900 chr1D 82.213 506 77 10 1 502 196099448 196098952 1.720000e-114 424.0
6 TraesCS1A01G111900 chr1D 81.437 334 39 13 1490 1817 484188773 484189089 8.610000e-63 252.0
7 TraesCS1A01G111900 chr1D 94.444 72 4 0 4976 5047 109809650 109809579 1.520000e-20 111.0
8 TraesCS1A01G111900 chr1D 88.750 80 2 5 5052 5130 211305090 211305163 1.990000e-14 91.6
9 TraesCS1A01G111900 chr1B 91.470 2251 114 26 2151 4340 165818224 165815991 0.000000e+00 3022.0
10 TraesCS1A01G111900 chr1B 91.938 707 47 10 790 1493 165819694 165818995 0.000000e+00 981.0
11 TraesCS1A01G111900 chr1B 88.833 600 48 11 1558 2150 165818907 165818320 0.000000e+00 719.0
12 TraesCS1A01G111900 chr1B 88.889 450 31 10 4504 4951 165815993 165815561 2.120000e-148 536.0
13 TraesCS1A01G111900 chr1B 95.833 72 3 0 4976 5047 165804547 165804476 3.280000e-22 117.0
14 TraesCS1A01G111900 chr7B 83.164 493 67 8 12 502 313767340 313767818 2.210000e-118 436.0
15 TraesCS1A01G111900 chr7B 80.237 506 73 15 1 502 709317763 709317281 6.380000e-94 355.0
16 TraesCS1A01G111900 chr7B 83.602 372 58 3 1 370 450580907 450581277 3.840000e-91 346.0
17 TraesCS1A01G111900 chr7B 94.857 175 8 1 4342 4516 562382321 562382148 6.610000e-69 272.0
18 TraesCS1A01G111900 chr3A 80.357 504 79 8 1 502 638018484 638018969 1.060000e-96 364.0
19 TraesCS1A01G111900 chr2A 78.920 574 83 16 1 558 666839671 666840222 6.380000e-94 355.0
20 TraesCS1A01G111900 chr2A 97.576 165 4 0 4342 4506 158458644 158458808 3.050000e-72 283.0
21 TraesCS1A01G111900 chr2A 90.909 132 5 5 5049 5178 701060232 701060106 2.480000e-38 171.0
22 TraesCS1A01G111900 chr2A 86.466 133 10 4 5050 5178 606533570 606533698 6.990000e-29 139.0
23 TraesCS1A01G111900 chr2A 100.000 28 0 0 550 577 601806375 601806348 9.000000e-03 52.8
24 TraesCS1A01G111900 chr5B 81.250 432 72 5 8 431 105969069 105968639 1.790000e-89 340.0
25 TraesCS1A01G111900 chr4D 79.757 494 75 19 18 502 52211168 52211645 8.310000e-88 335.0
26 TraesCS1A01G111900 chr4D 94.857 175 8 1 4341 4515 403413074 403412901 6.610000e-69 272.0
27 TraesCS1A01G111900 chr2D 95.429 175 8 0 4339 4513 554128376 554128202 3.950000e-71 279.0
28 TraesCS1A01G111900 chr2D 96.250 80 3 0 5099 5178 561337979 561337900 1.170000e-26 132.0
29 TraesCS1A01G111900 chr6D 96.407 167 6 0 4342 4508 392897139 392896973 5.110000e-70 276.0
30 TraesCS1A01G111900 chr6D 95.833 168 7 0 4340 4507 206560440 206560273 6.610000e-69 272.0
31 TraesCS1A01G111900 chr6D 92.248 129 4 4 5051 5178 59743262 59743385 1.480000e-40 178.0
32 TraesCS1A01G111900 chr6D 91.473 129 6 2 5050 5178 381358295 381358172 6.890000e-39 172.0
33 TraesCS1A01G111900 chr5A 95.882 170 7 0 4341 4510 290391862 290391693 5.110000e-70 276.0
34 TraesCS1A01G111900 chr4B 95.882 170 7 0 4339 4508 80990646 80990815 5.110000e-70 276.0
35 TraesCS1A01G111900 chr3B 91.710 193 13 3 4321 4511 749522855 749523046 1.110000e-66 265.0
36 TraesCS1A01G111900 chr7D 81.437 334 39 12 1490 1817 564891695 564891379 8.610000e-63 252.0
37 TraesCS1A01G111900 chr7D 96.094 128 5 0 5051 5178 220179710 220179583 5.250000e-50 209.0
38 TraesCS1A01G111900 chr7D 90.476 126 9 3 5050 5174 533913605 533913728 4.150000e-36 163.0
39 TraesCS1A01G111900 chr3D 81.437 334 39 11 1490 1817 33324471 33324787 8.610000e-63 252.0
40 TraesCS1A01G111900 chr7A 95.312 128 6 0 5051 5178 422822229 422822356 2.440000e-48 204.0
41 TraesCS1A01G111900 chr6B 90.909 132 10 1 5049 5178 236400609 236400478 5.330000e-40 176.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G111900 chr1A 113537311 113542488 5177 True 9563.000000 9563 100.0000 1 5178 1 chr1A.!!$R1 5177
1 TraesCS1A01G111900 chr1D 109815245 109820054 4809 True 2199.333333 3816 92.7370 1 4951 3 chr1D.!!$R3 4950
2 TraesCS1A01G111900 chr1B 165815561 165819694 4133 True 1314.500000 3022 90.2825 790 4951 4 chr1B.!!$R2 4161
3 TraesCS1A01G111900 chr2A 666839671 666840222 551 False 355.000000 355 78.9200 1 558 1 chr2A.!!$F3 557

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
359 362 0.407918 AAGGGCAAAGATTCGGGGAA 59.592 50.0 0.0 0.0 0.00 3.97 F
1159 1177 0.181350 CCCGCCTCAAGCCTATTTCT 59.819 55.0 0.0 0.0 38.78 2.52 F
1280 1298 0.897863 CGGGTTTTGATGCCTTCCCA 60.898 55.0 0.0 0.0 35.08 4.37 F
2802 2998 1.698506 TGTGGGTGTTTTGGTGGATC 58.301 50.0 0.0 0.0 0.00 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1265 1283 0.544120 GGGGTGGGAAGGCATCAAAA 60.544 55.000 0.00 0.0 0.00 2.44 R
2908 3109 0.955919 GGAGCGACAAACAAGAGGGG 60.956 60.000 0.00 0.0 0.00 4.79 R
2912 3113 1.266718 GCATTGGAGCGACAAACAAGA 59.733 47.619 0.34 0.0 33.48 3.02 R
4294 4533 0.674895 AGAAGAACGTGCCATCAGCC 60.675 55.000 0.00 0.0 42.71 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 46 2.356793 GGCTCCTCGCATGGATCG 60.357 66.667 0.00 0.00 41.67 3.69
47 49 2.037053 CTCCTCGCATGGATCGACT 58.963 57.895 0.00 0.00 35.30 4.18
49 51 1.037579 TCCTCGCATGGATCGACTGT 61.038 55.000 0.00 0.00 32.08 3.55
59 61 2.049475 GATCGACTGTCGGTCCCTCG 62.049 65.000 28.23 3.67 43.73 4.63
76 78 4.194720 GCGACGGCGGAGACAGAT 62.195 66.667 15.06 0.00 38.16 2.90
175 177 2.603776 ACGGAGAAGGCTCGGGTT 60.604 61.111 0.00 0.00 43.52 4.11
246 249 2.045561 TCATCCTCTCTGACTCCGAC 57.954 55.000 0.00 0.00 0.00 4.79
261 264 2.498466 GACGACGACGACGGTGAC 60.498 66.667 22.36 8.29 44.46 3.67
286 289 3.257393 GAAAGCTGCATCTTCTTCTCGA 58.743 45.455 2.77 0.00 0.00 4.04
290 293 1.923204 CTGCATCTTCTTCTCGAACGG 59.077 52.381 0.00 0.00 0.00 4.44
317 320 4.988716 TCCACCAGCCTCGGACGT 62.989 66.667 0.00 0.00 0.00 4.34
334 337 3.370231 TCTACAGCTGCGCCGACA 61.370 61.111 15.27 0.00 0.00 4.35
355 358 3.996825 CGAAAGGGCAAAGATTCGG 57.003 52.632 0.00 0.00 40.55 4.30
359 362 0.407918 AAGGGCAAAGATTCGGGGAA 59.592 50.000 0.00 0.00 0.00 3.97
372 375 0.905357 CGGGGAAGAAGTGGTGATCT 59.095 55.000 0.00 0.00 0.00 2.75
487 504 7.203910 TGCAAAGTTTGTTAATATCCGTTTGT 58.796 30.769 16.70 0.00 0.00 2.83
490 507 9.887406 CAAAGTTTGTTAATATCCGTTTGTAGT 57.113 29.630 7.48 0.00 0.00 2.73
509 526 5.752472 TGTAGTCGATTTTTGTTGTCCGTTA 59.248 36.000 0.00 0.00 0.00 3.18
512 529 6.731164 AGTCGATTTTTGTTGTCCGTTATTT 58.269 32.000 0.00 0.00 0.00 1.40
513 530 6.854381 AGTCGATTTTTGTTGTCCGTTATTTC 59.146 34.615 0.00 0.00 0.00 2.17
524 541 5.712004 TGTCCGTTATTTCATCACGTAGAA 58.288 37.500 0.00 0.00 31.83 2.10
533 550 9.764363 TTATTTCATCACGTAGAATAGCTCAAT 57.236 29.630 0.00 0.00 0.00 2.57
540 557 6.750501 TCACGTAGAATAGCTCAATGTTACAC 59.249 38.462 0.00 0.00 0.00 2.90
583 600 8.985315 AATACCGGATATAAGATACGTGGATA 57.015 34.615 9.46 0.00 0.00 2.59
619 636 8.894768 AATATTAGTTCTGTCTATTCAGTGCC 57.105 34.615 0.00 0.00 36.85 5.01
620 637 3.618690 AGTTCTGTCTATTCAGTGCCC 57.381 47.619 0.00 0.00 36.85 5.36
621 638 2.093973 AGTTCTGTCTATTCAGTGCCCG 60.094 50.000 0.00 0.00 36.85 6.13
641 658 1.427819 GCATCCGCGTGTTTTAGGG 59.572 57.895 4.92 0.00 0.00 3.53
644 661 2.193087 ATCCGCGTGTTTTAGGGGCT 62.193 55.000 4.92 0.00 39.90 5.19
658 675 1.133792 AGGGGCTGAATTAACCCATCG 60.134 52.381 11.06 0.00 46.21 3.84
671 688 1.359117 CCATCGCGGTCGTAGATGT 59.641 57.895 6.13 0.00 40.67 3.06
681 698 4.489841 GCGGTCGTAGATGTTCTTAAAACG 60.490 45.833 0.00 0.00 40.67 3.60
686 703 4.925054 CGTAGATGTTCTTAAAACGGGACA 59.075 41.667 0.00 0.00 0.00 4.02
832 849 8.227791 CGCAGACAATTCTTTTAGCTAAGTTAA 58.772 33.333 6.24 2.97 0.00 2.01
880 897 5.957842 ATTTGTTAAACATCGAAGCCTGA 57.042 34.783 0.00 0.00 0.00 3.86
922 939 9.434420 CAGCCAGAAAAATCAAAACCAATATAA 57.566 29.630 0.00 0.00 0.00 0.98
932 949 7.897575 TCAAAACCAATATAAGCGCAAAAAT 57.102 28.000 11.47 0.00 0.00 1.82
933 950 7.737395 TCAAAACCAATATAAGCGCAAAAATG 58.263 30.769 11.47 0.72 0.00 2.32
934 951 7.600375 TCAAAACCAATATAAGCGCAAAAATGA 59.400 29.630 11.47 0.00 0.00 2.57
989 1007 0.477597 AACCCTTCCACTCCATCCCA 60.478 55.000 0.00 0.00 0.00 4.37
1097 1115 3.203412 CGTCCTCCTCCTCGTCCG 61.203 72.222 0.00 0.00 0.00 4.79
1148 1166 3.318384 TAAGCAGTGCCCGCCTCA 61.318 61.111 12.58 0.00 0.00 3.86
1149 1167 2.889606 TAAGCAGTGCCCGCCTCAA 61.890 57.895 12.58 0.00 0.00 3.02
1150 1168 2.803155 TAAGCAGTGCCCGCCTCAAG 62.803 60.000 12.58 0.00 0.00 3.02
1158 1176 1.448119 GCCCGCCTCAAGCCTATTTC 61.448 60.000 0.00 0.00 38.78 2.17
1159 1177 0.181350 CCCGCCTCAAGCCTATTTCT 59.819 55.000 0.00 0.00 38.78 2.52
1162 1180 2.356069 CCGCCTCAAGCCTATTTCTTTC 59.644 50.000 0.00 0.00 38.78 2.62
1180 1198 6.704512 TCTTTCTCTTTTTGTGTGTTTTGC 57.295 33.333 0.00 0.00 0.00 3.68
1188 1206 1.106351 TGTGTGTTTTGCCGCATCCT 61.106 50.000 0.00 0.00 0.00 3.24
1191 1209 1.137872 TGTGTTTTGCCGCATCCTTTT 59.862 42.857 0.00 0.00 0.00 2.27
1280 1298 0.897863 CGGGTTTTGATGCCTTCCCA 60.898 55.000 0.00 0.00 35.08 4.37
1446 1472 3.853831 TGTGCAATTAGATGCTGTTGG 57.146 42.857 0.00 0.00 46.54 3.77
1451 1477 3.676873 GCAATTAGATGCTGTTGGGTTGG 60.677 47.826 0.00 0.00 43.06 3.77
1522 1586 7.604927 TCCTTGAACAAATAGTACCATGTACAC 59.395 37.037 0.00 0.00 0.00 2.90
1527 1591 6.934056 ACAAATAGTACCATGTACACGGTTA 58.066 36.000 20.19 6.96 36.69 2.85
1601 1665 4.939052 TCTAGATTCTCCGATTTGTCCC 57.061 45.455 0.00 0.00 0.00 4.46
1629 1693 8.740123 TCTTCCATTTTAGTGTGTTAGTCAAA 57.260 30.769 0.00 0.00 0.00 2.69
1669 1733 6.875972 AGGTCAAGTAAAGTGGATCTATGT 57.124 37.500 0.00 0.00 0.00 2.29
1708 1774 7.620880 TGCAGTGAATTATTTCTACCACTAGT 58.379 34.615 0.00 0.00 34.01 2.57
1807 1873 2.899900 TCTTTTAGCTGCTCAGTGGAGA 59.100 45.455 4.91 0.00 44.26 3.71
1883 1950 3.466723 TGGATCACCATCATTATTGGGGT 59.533 43.478 0.00 0.00 41.77 4.95
1892 1963 5.699458 CCATCATTATTGGGGTCGTAGTTAC 59.301 44.000 0.00 0.00 0.00 2.50
1923 1994 7.384477 TGAACCCTTCTCTAGCTAGTTTTAAC 58.616 38.462 20.10 6.21 0.00 2.01
1952 2023 5.862924 TCACTAAATACAGTTTCTGCAGC 57.137 39.130 9.47 0.00 34.37 5.25
1975 2046 7.437869 GCATTAGCGATTCTTCTTTTAAACC 57.562 36.000 0.00 0.00 0.00 3.27
1982 2053 8.884726 AGCGATTCTTCTTTTAAACCTTATCTC 58.115 33.333 0.00 0.00 0.00 2.75
2155 2321 4.033990 GCTTTTAGCAGCCTACCATTTC 57.966 45.455 0.00 0.00 41.89 2.17
2370 2565 7.681939 TTTTGGAAAATACTTGCTCGTCTAT 57.318 32.000 0.00 0.00 0.00 1.98
2376 2571 8.966194 GGAAAATACTTGCTCGTCTATAGTTAC 58.034 37.037 0.00 0.00 0.00 2.50
2398 2593 5.500234 ACTAATTGCAGCAATAGTCCAAGA 58.500 37.500 21.15 0.00 32.43 3.02
2446 2641 7.360113 ACATTTACCTGGTTCAGTTGAATTT 57.640 32.000 3.84 0.00 36.33 1.82
2500 2695 2.906354 AGGTGAATCCTCGTATTGTGC 58.094 47.619 0.00 0.00 44.42 4.57
2501 2696 2.236146 AGGTGAATCCTCGTATTGTGCA 59.764 45.455 0.00 0.00 44.42 4.57
2541 2737 5.187772 TGTCATTACTGCCTCACTATTGACT 59.812 40.000 0.00 0.00 33.79 3.41
2561 2757 3.931468 ACTGACATCTGATGCTCTTTTCG 59.069 43.478 17.24 5.97 0.00 3.46
2670 2866 4.991056 AGTTGCATATTGCTATACGACCTG 59.009 41.667 0.75 0.00 45.31 4.00
2794 2990 5.773176 CCTTAGAAAGGTATGTGGGTGTTTT 59.227 40.000 0.00 0.00 43.95 2.43
2802 2998 1.698506 TGTGGGTGTTTTGGTGGATC 58.301 50.000 0.00 0.00 0.00 3.36
2804 3000 2.316108 GTGGGTGTTTTGGTGGATCTT 58.684 47.619 0.00 0.00 0.00 2.40
2806 3002 3.133901 GTGGGTGTTTTGGTGGATCTTTT 59.866 43.478 0.00 0.00 0.00 2.27
2807 3003 3.133721 TGGGTGTTTTGGTGGATCTTTTG 59.866 43.478 0.00 0.00 0.00 2.44
2808 3004 3.386402 GGGTGTTTTGGTGGATCTTTTGA 59.614 43.478 0.00 0.00 0.00 2.69
2809 3005 4.141824 GGGTGTTTTGGTGGATCTTTTGAA 60.142 41.667 0.00 0.00 0.00 2.69
2810 3006 4.808895 GGTGTTTTGGTGGATCTTTTGAAC 59.191 41.667 0.00 0.00 0.00 3.18
2814 3015 6.816140 TGTTTTGGTGGATCTTTTGAACTTTC 59.184 34.615 0.00 0.00 0.00 2.62
2836 3037 9.725019 CTTTCATACCAAGCCTACATTATCATA 57.275 33.333 0.00 0.00 0.00 2.15
2838 3039 9.671279 TTCATACCAAGCCTACATTATCATATG 57.329 33.333 0.00 0.00 0.00 1.78
2849 3050 9.017509 CCTACATTATCATATGGCAATTCAAGT 57.982 33.333 2.13 0.88 0.00 3.16
2912 3113 1.393468 ATGTTCCCTTTTAGCCCCCT 58.607 50.000 0.00 0.00 0.00 4.79
2954 3155 3.132289 CCTTCGCTTGAATAGGGTACTGA 59.868 47.826 0.00 0.00 37.99 3.41
3095 3296 7.543520 CAGAGTAAATTTCCTCCTTTTTGCATC 59.456 37.037 7.12 0.00 0.00 3.91
3096 3297 7.233348 AGAGTAAATTTCCTCCTTTTTGCATCA 59.767 33.333 7.12 0.00 0.00 3.07
3112 3313 5.606348 TGCATCAAGTAGGGTTTTGTTTT 57.394 34.783 0.00 0.00 0.00 2.43
3327 3533 4.157246 GTCACCCTTTTTAGTTCCCCAAT 58.843 43.478 0.00 0.00 0.00 3.16
3328 3534 4.219944 GTCACCCTTTTTAGTTCCCCAATC 59.780 45.833 0.00 0.00 0.00 2.67
3336 3542 6.584185 TTTTAGTTCCCCAATCTTTACTGC 57.416 37.500 0.00 0.00 0.00 4.40
3343 3549 3.944015 CCCCAATCTTTACTGCTCTGAAG 59.056 47.826 0.00 0.00 0.00 3.02
3352 3558 7.316640 TCTTTACTGCTCTGAAGAACATACTC 58.683 38.462 0.00 0.00 0.00 2.59
3354 3560 3.119316 ACTGCTCTGAAGAACATACTCCG 60.119 47.826 0.00 0.00 0.00 4.63
3366 3572 2.623889 ACATACTCCGTAGCTTAGGCAG 59.376 50.000 0.00 0.00 41.70 4.85
3383 3589 7.520614 GCTTAGGCAGATGGTGATTATTACAAC 60.521 40.741 0.00 0.00 38.54 3.32
3386 3592 6.891908 AGGCAGATGGTGATTATTACAACTTT 59.108 34.615 0.00 0.00 0.00 2.66
3416 3623 2.163818 TTCCTTGTCAACTACAGGCG 57.836 50.000 0.00 0.00 39.87 5.52
3437 3644 2.672961 TTGTGACCGATGAGGATGAC 57.327 50.000 0.00 0.00 45.00 3.06
3486 3693 0.609957 AGCTGCTGTTAAGGCATGCA 60.610 50.000 21.36 0.00 39.07 3.96
3510 3717 4.730949 TTCCCGACTACTAGTTGATTGG 57.269 45.455 11.43 8.80 31.05 3.16
3527 3734 1.009675 GGTGTTGCTGAACTGTGCG 60.010 57.895 0.00 0.00 32.79 5.34
3536 3752 2.736721 GCTGAACTGTGCGAAGAACATA 59.263 45.455 0.00 0.00 0.00 2.29
3537 3753 3.423645 GCTGAACTGTGCGAAGAACATAC 60.424 47.826 0.00 0.00 0.00 2.39
3538 3754 3.064207 TGAACTGTGCGAAGAACATACC 58.936 45.455 0.00 0.00 0.00 2.73
3539 3755 3.244078 TGAACTGTGCGAAGAACATACCT 60.244 43.478 0.00 0.00 0.00 3.08
3540 3756 2.960819 ACTGTGCGAAGAACATACCTC 58.039 47.619 0.00 0.00 0.00 3.85
3541 3757 2.563179 ACTGTGCGAAGAACATACCTCT 59.437 45.455 0.00 0.00 0.00 3.69
3542 3758 3.182967 CTGTGCGAAGAACATACCTCTC 58.817 50.000 0.00 0.00 0.00 3.20
3543 3759 2.560981 TGTGCGAAGAACATACCTCTCA 59.439 45.455 0.00 0.00 0.00 3.27
3544 3760 2.924290 GTGCGAAGAACATACCTCTCAC 59.076 50.000 0.00 0.00 0.00 3.51
3545 3761 2.560981 TGCGAAGAACATACCTCTCACA 59.439 45.455 0.00 0.00 0.00 3.58
3546 3762 3.195610 TGCGAAGAACATACCTCTCACAT 59.804 43.478 0.00 0.00 0.00 3.21
3547 3763 4.401202 TGCGAAGAACATACCTCTCACATA 59.599 41.667 0.00 0.00 0.00 2.29
3741 3958 5.012046 TGTTCCACTCAGTCACATATGTTCT 59.988 40.000 5.37 5.10 0.00 3.01
3782 4003 4.980590 TGCTTCTTGTGTGTAACTGTTTG 58.019 39.130 0.00 0.00 38.04 2.93
3928 4149 3.126831 GCAGATAATTGAGAGGTCACCG 58.873 50.000 0.00 0.00 30.10 4.94
3937 4158 2.203788 AGGTCACCGCCCAAGAGA 60.204 61.111 0.00 0.00 0.00 3.10
4014 4235 0.685097 TGTTCTTGAACCGCTAGCCT 59.315 50.000 9.66 0.00 0.00 4.58
4084 4308 5.314529 AGATAAGATAGTGGCGTAGTGCTA 58.685 41.667 0.00 0.00 45.43 3.49
4108 4332 0.172578 TAGCTGATCCCGTCGTGTTG 59.827 55.000 0.00 0.00 0.00 3.33
4146 4370 8.792633 AGATCTCTGAATGTAGTAGCTGTATTC 58.207 37.037 0.00 0.18 0.00 1.75
4147 4371 7.881775 TCTCTGAATGTAGTAGCTGTATTCA 57.118 36.000 0.00 4.82 36.60 2.57
4213 4452 6.817765 ATGGCGGTATCGAATTTATTCATT 57.182 33.333 0.00 0.00 39.00 2.57
4286 4525 2.398252 TGAGCTGCATTCTCTTGAGG 57.602 50.000 14.68 0.00 0.00 3.86
4294 4533 2.159599 GCATTCTCTTGAGGACGCTTTG 60.160 50.000 0.00 0.00 0.00 2.77
4318 4557 4.320202 GCTGATGGCACGTTCTTCTTTTAA 60.320 41.667 0.00 0.00 41.35 1.52
4336 4636 7.228590 TCTTTTAACTTAATACCTGCACCAGT 58.771 34.615 0.00 0.00 0.00 4.00
4340 4640 4.828829 ACTTAATACCTGCACCAGTGTAC 58.171 43.478 0.00 0.00 0.00 2.90
4341 4641 4.530946 ACTTAATACCTGCACCAGTGTACT 59.469 41.667 0.00 0.00 0.00 2.73
4342 4642 5.718130 ACTTAATACCTGCACCAGTGTACTA 59.282 40.000 0.00 0.00 0.00 1.82
4343 4643 4.467198 AATACCTGCACCAGTGTACTAC 57.533 45.455 0.00 0.00 0.00 2.73
4344 4644 2.011122 ACCTGCACCAGTGTACTACT 57.989 50.000 0.00 0.00 41.36 2.57
4345 4645 1.893801 ACCTGCACCAGTGTACTACTC 59.106 52.381 0.00 0.00 37.60 2.59
4346 4646 1.204941 CCTGCACCAGTGTACTACTCC 59.795 57.143 0.00 0.00 37.60 3.85
4347 4647 1.204941 CTGCACCAGTGTACTACTCCC 59.795 57.143 0.00 0.00 37.60 4.30
4348 4648 1.203137 TGCACCAGTGTACTACTCCCT 60.203 52.381 0.00 0.00 37.60 4.20
4349 4649 1.477295 GCACCAGTGTACTACTCCCTC 59.523 57.143 0.00 0.00 37.60 4.30
4350 4650 2.100989 CACCAGTGTACTACTCCCTCC 58.899 57.143 0.00 0.00 37.60 4.30
4351 4651 1.340795 ACCAGTGTACTACTCCCTCCG 60.341 57.143 0.00 0.00 37.60 4.63
4352 4652 1.340795 CCAGTGTACTACTCCCTCCGT 60.341 57.143 0.00 0.00 37.60 4.69
4353 4653 2.444421 CAGTGTACTACTCCCTCCGTT 58.556 52.381 0.00 0.00 37.60 4.44
4354 4654 2.422832 CAGTGTACTACTCCCTCCGTTC 59.577 54.545 0.00 0.00 37.60 3.95
4355 4655 1.747924 GTGTACTACTCCCTCCGTTCC 59.252 57.143 0.00 0.00 0.00 3.62
4356 4656 1.637553 TGTACTACTCCCTCCGTTCCT 59.362 52.381 0.00 0.00 0.00 3.36
4357 4657 2.846206 TGTACTACTCCCTCCGTTCCTA 59.154 50.000 0.00 0.00 0.00 2.94
4358 4658 3.266772 TGTACTACTCCCTCCGTTCCTAA 59.733 47.826 0.00 0.00 0.00 2.69
4359 4659 3.463048 ACTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
4360 4660 3.991683 ACTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
4361 4661 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
4362 4662 5.713807 ACTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
4363 4663 6.141790 ACTACTCCCTCCGTTCCTAAATATT 58.858 40.000 0.00 0.00 0.00 1.28
4364 4664 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
4365 4665 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
4366 4666 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
4367 4667 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
4368 4668 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
4369 4669 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
4370 4670 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
4371 4671 7.122204 CCCTCCGTTCCTAAATATTTGTCTTTT 59.878 37.037 11.05 0.00 0.00 2.27
4372 4672 8.520351 CCTCCGTTCCTAAATATTTGTCTTTTT 58.480 33.333 11.05 0.00 0.00 1.94
4375 4675 9.783256 CCGTTCCTAAATATTTGTCTTTTTAGG 57.217 33.333 11.05 12.11 46.30 2.69
4376 4676 9.783256 CGTTCCTAAATATTTGTCTTTTTAGGG 57.217 33.333 11.05 2.25 45.55 3.53
4389 4689 9.541143 TTGTCTTTTTAGGGATTTCAAATGAAC 57.459 29.630 0.00 0.00 33.13 3.18
4390 4690 8.923270 TGTCTTTTTAGGGATTTCAAATGAACT 58.077 29.630 0.00 0.00 33.13 3.01
4393 4693 9.639601 CTTTTTAGGGATTTCAAATGAACTACC 57.360 33.333 6.65 6.65 37.82 3.18
4394 4694 8.713708 TTTTAGGGATTTCAAATGAACTACCA 57.286 30.769 14.95 1.73 39.44 3.25
4395 4695 7.696992 TTAGGGATTTCAAATGAACTACCAC 57.303 36.000 14.95 5.67 39.44 4.16
4396 4696 5.640147 AGGGATTTCAAATGAACTACCACA 58.360 37.500 14.95 0.00 39.44 4.17
4397 4697 6.256053 AGGGATTTCAAATGAACTACCACAT 58.744 36.000 14.95 0.00 39.44 3.21
4398 4698 7.410174 AGGGATTTCAAATGAACTACCACATA 58.590 34.615 14.95 0.00 39.44 2.29
4399 4699 7.339466 AGGGATTTCAAATGAACTACCACATAC 59.661 37.037 14.95 0.00 39.44 2.39
4400 4700 7.186804 GGATTTCAAATGAACTACCACATACG 58.813 38.462 0.00 0.00 33.13 3.06
4401 4701 6.489127 TTTCAAATGAACTACCACATACGG 57.511 37.500 0.00 0.00 33.13 4.02
4402 4702 5.408880 TCAAATGAACTACCACATACGGA 57.591 39.130 0.00 0.00 0.00 4.69
4403 4703 5.984725 TCAAATGAACTACCACATACGGAT 58.015 37.500 0.00 0.00 0.00 4.18
4404 4704 5.815222 TCAAATGAACTACCACATACGGATG 59.185 40.000 5.94 5.94 39.16 3.51
4406 4706 6.474140 AATGAACTACCACATACGGATGTA 57.526 37.500 14.23 0.00 44.82 2.29
4407 4707 6.665992 ATGAACTACCACATACGGATGTAT 57.334 37.500 14.23 7.46 44.82 2.29
4408 4708 7.770366 ATGAACTACCACATACGGATGTATA 57.230 36.000 14.23 8.27 44.82 1.47
4409 4709 7.770366 TGAACTACCACATACGGATGTATAT 57.230 36.000 14.23 4.37 44.82 0.86
4410 4710 8.866970 TGAACTACCACATACGGATGTATATA 57.133 34.615 14.23 5.36 44.82 0.86
4411 4711 8.953313 TGAACTACCACATACGGATGTATATAG 58.047 37.037 14.23 16.35 44.82 1.31
4412 4712 9.170734 GAACTACCACATACGGATGTATATAGA 57.829 37.037 22.62 5.04 44.82 1.98
4413 4713 8.503458 ACTACCACATACGGATGTATATAGAC 57.497 38.462 22.62 0.00 44.82 2.59
4414 4714 8.105197 ACTACCACATACGGATGTATATAGACA 58.895 37.037 22.62 2.07 44.82 3.41
4415 4715 7.956328 ACCACATACGGATGTATATAGACAT 57.044 36.000 14.23 12.70 44.82 3.06
4417 4717 9.642343 ACCACATACGGATGTATATAGACATAT 57.358 33.333 14.23 5.08 44.82 1.78
4447 4747 9.282569 AGAGTATAGATTCATTCATTTTGCTCC 57.717 33.333 0.00 0.00 0.00 4.70
4448 4748 8.985315 AGTATAGATTCATTCATTTTGCTCCA 57.015 30.769 0.00 0.00 0.00 3.86
4449 4749 9.584008 AGTATAGATTCATTCATTTTGCTCCAT 57.416 29.630 0.00 0.00 0.00 3.41
4453 4753 8.246430 AGATTCATTCATTTTGCTCCATATGT 57.754 30.769 1.24 0.00 0.00 2.29
4454 4754 9.358406 AGATTCATTCATTTTGCTCCATATGTA 57.642 29.630 1.24 0.00 0.00 2.29
4455 4755 9.622004 GATTCATTCATTTTGCTCCATATGTAG 57.378 33.333 1.24 0.00 0.00 2.74
4456 4756 8.523915 TTCATTCATTTTGCTCCATATGTAGT 57.476 30.769 1.24 0.00 0.00 2.73
4457 4757 8.158169 TCATTCATTTTGCTCCATATGTAGTC 57.842 34.615 1.24 0.00 0.00 2.59
4458 4758 7.774625 TCATTCATTTTGCTCCATATGTAGTCA 59.225 33.333 1.24 0.00 0.00 3.41
4459 4759 6.925610 TCATTTTGCTCCATATGTAGTCAC 57.074 37.500 1.24 0.00 0.00 3.67
4460 4760 6.653020 TCATTTTGCTCCATATGTAGTCACT 58.347 36.000 1.24 0.00 0.00 3.41
4461 4761 7.112122 TCATTTTGCTCCATATGTAGTCACTT 58.888 34.615 1.24 0.00 0.00 3.16
4462 4762 6.741992 TTTTGCTCCATATGTAGTCACTTG 57.258 37.500 1.24 0.00 0.00 3.16
4463 4763 5.420725 TTGCTCCATATGTAGTCACTTGT 57.579 39.130 1.24 0.00 0.00 3.16
4464 4764 5.420725 TGCTCCATATGTAGTCACTTGTT 57.579 39.130 1.24 0.00 0.00 2.83
4465 4765 5.178061 TGCTCCATATGTAGTCACTTGTTG 58.822 41.667 1.24 0.00 0.00 3.33
4466 4766 5.046663 TGCTCCATATGTAGTCACTTGTTGA 60.047 40.000 1.24 0.00 0.00 3.18
4467 4767 5.874810 GCTCCATATGTAGTCACTTGTTGAA 59.125 40.000 1.24 0.00 35.39 2.69
4468 4768 6.371548 GCTCCATATGTAGTCACTTGTTGAAA 59.628 38.462 1.24 0.00 35.39 2.69
4469 4769 7.066284 GCTCCATATGTAGTCACTTGTTGAAAT 59.934 37.037 1.24 0.00 35.39 2.17
4470 4770 9.599866 CTCCATATGTAGTCACTTGTTGAAATA 57.400 33.333 1.24 0.00 35.39 1.40
4482 4782 9.996554 TCACTTGTTGAAATATCTAGAAAGACA 57.003 29.630 0.00 0.00 33.57 3.41
4497 4797 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
4498 4798 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
4499 4799 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
4500 4800 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
4501 4801 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
4502 4802 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
4503 4803 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
4504 4804 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
4505 4805 6.384886 ACAAATATTTAGGAACGGAGGGAGTA 59.615 38.462 0.00 0.00 0.00 2.59
4518 4818 3.294214 GAGGGAGTATTTCCTACACCGA 58.706 50.000 0.00 0.00 45.98 4.69
4520 4820 2.223665 GGGAGTATTTCCTACACCGACG 60.224 54.545 0.00 0.00 45.98 5.12
4588 4888 3.495753 CAGGTTGTGGGTTTCGTTAGTAC 59.504 47.826 0.00 0.00 0.00 2.73
4625 4925 9.426837 CCATCATGAAAAATGTGAAAACTATGT 57.573 29.630 0.00 0.00 0.00 2.29
4700 5000 1.800586 GAACTTTGACTCTGCATGCGA 59.199 47.619 14.09 12.21 0.00 5.10
4812 5114 5.059833 CAGCTCCCCTATGTATGAAAACTC 58.940 45.833 0.00 0.00 0.00 3.01
4876 5178 6.632834 CGGACGAATAAATGCAAAATCTTAGG 59.367 38.462 0.00 0.00 0.00 2.69
4896 5198 2.368548 GGTTGCTTGTTTTTCCCATCCT 59.631 45.455 0.00 0.00 0.00 3.24
4911 5213 3.191371 CCCATCCTTTGTTAGCAACAGTC 59.809 47.826 0.00 0.00 43.27 3.51
4924 5226 1.806542 CAACAGTCTGTGCCATGTACC 59.193 52.381 6.18 0.00 0.00 3.34
4926 5228 1.699634 ACAGTCTGTGCCATGTACCTT 59.300 47.619 4.21 0.00 0.00 3.50
4951 5253 4.393155 ACGATGCAAGCCGGAGCA 62.393 61.111 17.12 17.12 45.92 4.26
4952 5254 3.126879 CGATGCAAGCCGGAGCAA 61.127 61.111 18.39 5.05 44.88 3.91
4953 5255 2.475466 CGATGCAAGCCGGAGCAAT 61.475 57.895 18.39 8.95 44.88 3.56
4954 5256 1.065273 GATGCAAGCCGGAGCAATG 59.935 57.895 18.39 4.68 44.88 2.82
4955 5257 1.660560 GATGCAAGCCGGAGCAATGT 61.661 55.000 18.39 4.79 44.88 2.71
4956 5258 0.394216 ATGCAAGCCGGAGCAATGTA 60.394 50.000 18.39 3.65 44.88 2.29
4957 5259 1.305219 TGCAAGCCGGAGCAATGTAC 61.305 55.000 5.05 0.00 43.56 2.90
4958 5260 1.305219 GCAAGCCGGAGCAATGTACA 61.305 55.000 5.05 0.00 43.56 2.90
4959 5261 1.164411 CAAGCCGGAGCAATGTACAA 58.836 50.000 5.05 0.00 43.56 2.41
4960 5262 1.131126 CAAGCCGGAGCAATGTACAAG 59.869 52.381 5.05 0.00 43.56 3.16
4961 5263 1.026718 AGCCGGAGCAATGTACAAGC 61.027 55.000 5.05 13.95 43.56 4.01
4962 5264 1.026718 GCCGGAGCAATGTACAAGCT 61.027 55.000 21.75 21.75 42.17 3.74
4970 5272 5.909621 AGCAATGTACAAGCTCATTTCAT 57.090 34.783 17.53 0.00 32.05 2.57
4972 5274 7.395190 AGCAATGTACAAGCTCATTTCATAA 57.605 32.000 17.53 0.00 32.05 1.90
4973 5275 7.253422 AGCAATGTACAAGCTCATTTCATAAC 58.747 34.615 17.53 0.00 32.05 1.89
4974 5276 7.028962 GCAATGTACAAGCTCATTTCATAACA 58.971 34.615 14.38 0.00 32.85 2.41
4975 5277 7.541783 GCAATGTACAAGCTCATTTCATAACAA 59.458 33.333 14.38 0.00 32.85 2.83
4976 5278 9.409312 CAATGTACAAGCTCATTTCATAACAAA 57.591 29.630 0.00 0.00 32.85 2.83
4986 5288 9.884465 GCTCATTTCATAACAAATACTACATCC 57.116 33.333 0.00 0.00 0.00 3.51
4998 5300 9.295825 ACAAATACTACATCCAAAGATTGAACA 57.704 29.630 0.00 0.00 0.00 3.18
5001 5303 6.824305 ACTACATCCAAAGATTGAACAAGG 57.176 37.500 0.00 0.00 0.00 3.61
5002 5304 5.711976 ACTACATCCAAAGATTGAACAAGGG 59.288 40.000 0.00 0.00 0.00 3.95
5003 5305 4.739793 ACATCCAAAGATTGAACAAGGGA 58.260 39.130 0.00 0.00 0.00 4.20
5004 5306 4.768968 ACATCCAAAGATTGAACAAGGGAG 59.231 41.667 0.00 0.00 0.00 4.30
5005 5307 3.766545 TCCAAAGATTGAACAAGGGAGG 58.233 45.455 0.00 0.00 0.00 4.30
5006 5308 3.140144 TCCAAAGATTGAACAAGGGAGGT 59.860 43.478 0.00 0.00 0.00 3.85
5007 5309 3.507622 CCAAAGATTGAACAAGGGAGGTC 59.492 47.826 0.00 0.00 0.00 3.85
5008 5310 4.144297 CAAAGATTGAACAAGGGAGGTCA 58.856 43.478 0.00 0.00 0.00 4.02
5009 5311 4.453480 AAGATTGAACAAGGGAGGTCAA 57.547 40.909 0.00 0.00 0.00 3.18
5010 5312 3.756117 AGATTGAACAAGGGAGGTCAAC 58.244 45.455 0.00 0.00 0.00 3.18
5011 5313 3.138283 AGATTGAACAAGGGAGGTCAACA 59.862 43.478 0.00 0.00 0.00 3.33
5012 5314 3.374042 TTGAACAAGGGAGGTCAACAA 57.626 42.857 0.00 0.00 0.00 2.83
5013 5315 3.374042 TGAACAAGGGAGGTCAACAAA 57.626 42.857 0.00 0.00 0.00 2.83
5014 5316 3.909732 TGAACAAGGGAGGTCAACAAAT 58.090 40.909 0.00 0.00 0.00 2.32
5015 5317 5.055265 TGAACAAGGGAGGTCAACAAATA 57.945 39.130 0.00 0.00 0.00 1.40
5016 5318 5.450453 TGAACAAGGGAGGTCAACAAATAA 58.550 37.500 0.00 0.00 0.00 1.40
5017 5319 5.894393 TGAACAAGGGAGGTCAACAAATAAA 59.106 36.000 0.00 0.00 0.00 1.40
5018 5320 6.381420 TGAACAAGGGAGGTCAACAAATAAAA 59.619 34.615 0.00 0.00 0.00 1.52
5019 5321 6.156748 ACAAGGGAGGTCAACAAATAAAAC 57.843 37.500 0.00 0.00 0.00 2.43
5020 5322 5.659079 ACAAGGGAGGTCAACAAATAAAACA 59.341 36.000 0.00 0.00 0.00 2.83
5021 5323 6.155393 ACAAGGGAGGTCAACAAATAAAACAA 59.845 34.615 0.00 0.00 0.00 2.83
5022 5324 6.800072 AGGGAGGTCAACAAATAAAACAAA 57.200 33.333 0.00 0.00 0.00 2.83
5023 5325 7.373617 AGGGAGGTCAACAAATAAAACAAAT 57.626 32.000 0.00 0.00 0.00 2.32
5024 5326 7.801104 AGGGAGGTCAACAAATAAAACAAATT 58.199 30.769 0.00 0.00 0.00 1.82
5025 5327 8.271458 AGGGAGGTCAACAAATAAAACAAATTT 58.729 29.630 0.00 0.00 34.92 1.82
5026 5328 9.549078 GGGAGGTCAACAAATAAAACAAATTTA 57.451 29.630 0.00 0.00 37.86 1.40
5035 5337 9.462606 ACAAATAAAACAAATTTAACCAACCCA 57.537 25.926 0.00 0.00 37.06 4.51
5036 5338 9.723447 CAAATAAAACAAATTTAACCAACCCAC 57.277 29.630 0.00 0.00 37.06 4.61
5037 5339 9.462606 AAATAAAACAAATTTAACCAACCCACA 57.537 25.926 0.00 0.00 37.06 4.17
5038 5340 9.462606 AATAAAACAAATTTAACCAACCCACAA 57.537 25.926 0.00 0.00 37.06 3.33
5039 5341 7.946381 AAAACAAATTTAACCAACCCACAAT 57.054 28.000 0.00 0.00 0.00 2.71
5040 5342 7.561021 AAACAAATTTAACCAACCCACAATC 57.439 32.000 0.00 0.00 0.00 2.67
5041 5343 5.616270 ACAAATTTAACCAACCCACAATCC 58.384 37.500 0.00 0.00 0.00 3.01
5042 5344 5.131142 ACAAATTTAACCAACCCACAATCCA 59.869 36.000 0.00 0.00 0.00 3.41
5043 5345 6.183361 ACAAATTTAACCAACCCACAATCCAT 60.183 34.615 0.00 0.00 0.00 3.41
5044 5346 7.016661 ACAAATTTAACCAACCCACAATCCATA 59.983 33.333 0.00 0.00 0.00 2.74
5045 5347 5.986501 TTTAACCAACCCACAATCCATAC 57.013 39.130 0.00 0.00 0.00 2.39
5046 5348 3.825908 AACCAACCCACAATCCATACT 57.174 42.857 0.00 0.00 0.00 2.12
5047 5349 3.366052 ACCAACCCACAATCCATACTC 57.634 47.619 0.00 0.00 0.00 2.59
5048 5350 2.919602 ACCAACCCACAATCCATACTCT 59.080 45.455 0.00 0.00 0.00 3.24
5049 5351 3.333680 ACCAACCCACAATCCATACTCTT 59.666 43.478 0.00 0.00 0.00 2.85
5050 5352 4.202673 ACCAACCCACAATCCATACTCTTT 60.203 41.667 0.00 0.00 0.00 2.52
5051 5353 4.772100 CCAACCCACAATCCATACTCTTTT 59.228 41.667 0.00 0.00 0.00 2.27
5052 5354 5.245977 CCAACCCACAATCCATACTCTTTTT 59.754 40.000 0.00 0.00 0.00 1.94
5088 5390 6.990798 TGGCACACTTTATTCAATCAAATGA 58.009 32.000 0.00 0.00 0.00 2.57
5089 5391 7.440198 TGGCACACTTTATTCAATCAAATGAA 58.560 30.769 0.00 0.00 43.03 2.57
5090 5392 7.930325 TGGCACACTTTATTCAATCAAATGAAA 59.070 29.630 0.00 0.00 42.22 2.69
5091 5393 8.938906 GGCACACTTTATTCAATCAAATGAAAT 58.061 29.630 0.00 0.00 42.22 2.17
5117 5419 7.946655 TCTGTTACATCACTAACAAGTTCAG 57.053 36.000 0.00 0.00 36.42 3.02
5118 5420 6.423905 TCTGTTACATCACTAACAAGTTCAGC 59.576 38.462 0.00 0.00 36.42 4.26
5119 5421 6.288294 TGTTACATCACTAACAAGTTCAGCT 58.712 36.000 0.00 0.00 34.38 4.24
5120 5422 7.438564 TGTTACATCACTAACAAGTTCAGCTA 58.561 34.615 0.00 0.00 34.38 3.32
5121 5423 7.598869 TGTTACATCACTAACAAGTTCAGCTAG 59.401 37.037 0.00 0.00 34.38 3.42
5122 5424 5.482908 ACATCACTAACAAGTTCAGCTAGG 58.517 41.667 0.00 0.00 0.00 3.02
5123 5425 5.246203 ACATCACTAACAAGTTCAGCTAGGA 59.754 40.000 0.00 0.00 0.00 2.94
5124 5426 6.070538 ACATCACTAACAAGTTCAGCTAGGAT 60.071 38.462 0.00 0.00 0.00 3.24
5125 5427 7.124298 ACATCACTAACAAGTTCAGCTAGGATA 59.876 37.037 0.00 0.00 0.00 2.59
5126 5428 7.476540 TCACTAACAAGTTCAGCTAGGATAA 57.523 36.000 0.00 0.00 0.00 1.75
5127 5429 8.079211 TCACTAACAAGTTCAGCTAGGATAAT 57.921 34.615 0.00 0.00 0.00 1.28
5128 5430 8.198109 TCACTAACAAGTTCAGCTAGGATAATC 58.802 37.037 0.00 0.00 0.00 1.75
5129 5431 8.200792 CACTAACAAGTTCAGCTAGGATAATCT 58.799 37.037 0.00 0.00 0.00 2.40
5130 5432 8.200792 ACTAACAAGTTCAGCTAGGATAATCTG 58.799 37.037 0.00 0.00 0.00 2.90
5131 5433 5.363939 ACAAGTTCAGCTAGGATAATCTGC 58.636 41.667 0.00 0.00 0.00 4.26
5132 5434 4.250116 AGTTCAGCTAGGATAATCTGCG 57.750 45.455 0.00 0.00 0.00 5.18
5133 5435 3.006323 AGTTCAGCTAGGATAATCTGCGG 59.994 47.826 0.00 0.00 0.00 5.69
5134 5436 2.876581 TCAGCTAGGATAATCTGCGGA 58.123 47.619 0.00 0.00 0.00 5.54
5135 5437 2.822561 TCAGCTAGGATAATCTGCGGAG 59.177 50.000 0.00 0.00 0.00 4.63
5136 5438 2.094286 CAGCTAGGATAATCTGCGGAGG 60.094 54.545 3.37 0.00 0.00 4.30
5137 5439 2.171840 GCTAGGATAATCTGCGGAGGA 58.828 52.381 3.37 0.00 0.00 3.71
5138 5440 2.763448 GCTAGGATAATCTGCGGAGGAT 59.237 50.000 3.37 0.00 0.00 3.24
5139 5441 3.181480 GCTAGGATAATCTGCGGAGGATC 60.181 52.174 3.37 6.16 0.00 3.36
5140 5442 2.894731 AGGATAATCTGCGGAGGATCA 58.105 47.619 17.09 0.00 36.25 2.92
5141 5443 2.564947 AGGATAATCTGCGGAGGATCAC 59.435 50.000 17.09 9.38 36.25 3.06
5142 5444 2.354203 GGATAATCTGCGGAGGATCACC 60.354 54.545 17.09 0.00 36.25 4.02
5143 5445 1.048601 TAATCTGCGGAGGATCACCC 58.951 55.000 3.37 0.00 36.25 4.61
5152 5454 3.836945 AGGATCACCCTCCCAAGAA 57.163 52.632 0.00 0.00 43.31 2.52
5153 5455 2.059756 AGGATCACCCTCCCAAGAAA 57.940 50.000 0.00 0.00 43.31 2.52
5154 5456 2.577970 AGGATCACCCTCCCAAGAAAT 58.422 47.619 0.00 0.00 43.31 2.17
5155 5457 2.929043 AGGATCACCCTCCCAAGAAATT 59.071 45.455 0.00 0.00 43.31 1.82
5156 5458 4.119155 AGGATCACCCTCCCAAGAAATTA 58.881 43.478 0.00 0.00 43.31 1.40
5157 5459 4.079730 AGGATCACCCTCCCAAGAAATTAC 60.080 45.833 0.00 0.00 43.31 1.89
5158 5460 4.325030 GGATCACCCTCCCAAGAAATTACA 60.325 45.833 0.00 0.00 0.00 2.41
5159 5461 4.301072 TCACCCTCCCAAGAAATTACAG 57.699 45.455 0.00 0.00 0.00 2.74
5160 5462 3.913799 TCACCCTCCCAAGAAATTACAGA 59.086 43.478 0.00 0.00 0.00 3.41
5161 5463 4.352595 TCACCCTCCCAAGAAATTACAGAA 59.647 41.667 0.00 0.00 0.00 3.02
5162 5464 5.015178 TCACCCTCCCAAGAAATTACAGAAT 59.985 40.000 0.00 0.00 0.00 2.40
5163 5465 5.716703 CACCCTCCCAAGAAATTACAGAATT 59.283 40.000 0.00 0.00 36.82 2.17
5164 5466 6.889722 CACCCTCCCAAGAAATTACAGAATTA 59.110 38.462 0.00 0.00 34.01 1.40
5165 5467 7.067494 CACCCTCCCAAGAAATTACAGAATTAG 59.933 40.741 0.00 0.00 34.01 1.73
5166 5468 7.036863 ACCCTCCCAAGAAATTACAGAATTAGA 60.037 37.037 0.00 0.00 34.01 2.10
5167 5469 7.834181 CCCTCCCAAGAAATTACAGAATTAGAA 59.166 37.037 0.00 0.00 34.01 2.10
5168 5470 9.413734 CCTCCCAAGAAATTACAGAATTAGAAT 57.586 33.333 0.00 0.00 34.01 2.40
5170 5472 9.973661 TCCCAAGAAATTACAGAATTAGAATCA 57.026 29.630 0.00 0.00 34.01 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 1.077429 GTCCTCATTGGGCTCCACC 60.077 63.158 0.00 0.00 37.49 4.61
14 16 2.496817 GAGCCGCTCGTCCTCATT 59.503 61.111 4.23 0.00 0.00 2.57
44 46 4.477975 CGCGAGGGACCGACAGTC 62.478 72.222 0.00 0.00 45.51 3.51
59 61 4.194720 ATCTGTCTCCGCCGTCGC 62.195 66.667 0.00 0.00 0.00 5.19
76 78 1.005748 CCGTCAGAGACAGCAAGCA 60.006 57.895 0.00 0.00 32.09 3.91
85 87 1.176619 TGGCGTTCTTCCGTCAGAGA 61.177 55.000 0.00 0.00 37.56 3.10
89 91 1.301401 CCTTGGCGTTCTTCCGTCA 60.301 57.895 0.00 0.00 41.29 4.35
138 140 2.042831 GTTGCCTGCTTCGCCTCAT 61.043 57.895 0.00 0.00 0.00 2.90
175 177 1.600636 CTCCCGCTTCAACTTGGCA 60.601 57.895 0.00 0.00 0.00 4.92
196 198 2.052690 CCGACGGACCATCCTGTCT 61.053 63.158 8.64 0.00 37.67 3.41
203 205 1.686325 CCCTTCATCCGACGGACCAT 61.686 60.000 21.02 0.00 32.98 3.55
258 261 2.358615 ATGCAGCTTTCGCGGTCA 60.359 55.556 6.13 0.00 42.32 4.02
261 264 1.061570 GAAGATGCAGCTTTCGCGG 59.938 57.895 19.75 0.00 42.32 6.46
275 278 0.677288 TTGGCCGTTCGAGAAGAAGA 59.323 50.000 0.00 0.00 39.95 2.87
278 281 0.038526 GTCTTGGCCGTTCGAGAAGA 60.039 55.000 0.00 0.00 0.00 2.87
281 284 2.654877 GGTCTTGGCCGTTCGAGA 59.345 61.111 0.00 0.00 0.00 4.04
286 289 2.852075 TGGAGGGTCTTGGCCGTT 60.852 61.111 0.00 0.00 0.00 4.44
290 293 2.352805 CTGGTGGAGGGTCTTGGC 59.647 66.667 0.00 0.00 0.00 4.52
334 337 1.539827 CGAATCTTTGCCCTTTCGGTT 59.460 47.619 0.00 0.00 37.80 4.44
351 354 1.278127 GATCACCACTTCTTCCCCGAA 59.722 52.381 0.00 0.00 0.00 4.30
352 355 0.902531 GATCACCACTTCTTCCCCGA 59.097 55.000 0.00 0.00 0.00 5.14
355 358 1.740718 GCGAGATCACCACTTCTTCCC 60.741 57.143 0.00 0.00 0.00 3.97
359 362 1.617947 GGGGCGAGATCACCACTTCT 61.618 60.000 0.00 0.00 0.00 2.85
372 375 0.542938 CATATGAGGAGGAGGGGCGA 60.543 60.000 0.00 0.00 0.00 5.54
432 435 7.444183 TCCAAAAGATCAACTTAGTTCGTCATT 59.556 33.333 0.00 0.00 37.93 2.57
438 441 7.327032 GCAACATCCAAAAGATCAACTTAGTTC 59.673 37.037 0.00 0.00 37.93 3.01
487 504 7.424227 AATAACGGACAACAAAAATCGACTA 57.576 32.000 0.00 0.00 0.00 2.59
490 507 6.726230 TGAAATAACGGACAACAAAAATCGA 58.274 32.000 0.00 0.00 0.00 3.59
509 526 7.712639 ACATTGAGCTATTCTACGTGATGAAAT 59.287 33.333 0.00 0.00 0.00 2.17
512 529 6.149129 ACATTGAGCTATTCTACGTGATGA 57.851 37.500 0.00 0.00 0.00 2.92
513 530 6.834959 AACATTGAGCTATTCTACGTGATG 57.165 37.500 0.00 0.00 0.00 3.07
524 541 5.962433 ACTACACGTGTAACATTGAGCTAT 58.038 37.500 27.16 0.33 35.74 2.97
540 557 8.461222 TCCGGTATTTTATATCCATACTACACG 58.539 37.037 0.00 0.00 0.00 4.49
561 578 6.182627 TGTATCCACGTATCTTATATCCGGT 58.817 40.000 0.00 0.00 0.00 5.28
601 618 2.271800 CGGGCACTGAATAGACAGAAC 58.728 52.381 0.00 0.00 40.63 3.01
603 620 0.175760 GCGGGCACTGAATAGACAGA 59.824 55.000 0.00 0.00 40.63 3.41
604 621 1.148157 CGCGGGCACTGAATAGACAG 61.148 60.000 0.00 0.00 42.78 3.51
641 658 0.307760 CGCGATGGGTTAATTCAGCC 59.692 55.000 0.00 0.71 34.62 4.85
644 661 1.658994 GACCGCGATGGGTTAATTCA 58.341 50.000 8.23 0.00 44.64 2.57
658 675 4.489841 CGTTTTAAGAACATCTACGACCGC 60.490 45.833 0.00 0.00 29.07 5.68
671 688 1.515081 CCGCTGTCCCGTTTTAAGAA 58.485 50.000 0.00 0.00 0.00 2.52
695 712 6.380079 AATAGTTGAGAATTCAGGTGACCT 57.620 37.500 8.44 0.00 34.15 3.85
697 714 8.567948 TGAAAAATAGTTGAGAATTCAGGTGAC 58.432 33.333 8.44 0.00 34.15 3.67
698 715 8.567948 GTGAAAAATAGTTGAGAATTCAGGTGA 58.432 33.333 8.44 0.00 34.15 4.02
703 720 9.567776 TGTAGGTGAAAAATAGTTGAGAATTCA 57.432 29.630 8.44 0.00 0.00 2.57
795 812 8.492673 AAAGAATTGTCTGCGTAATTATCTCA 57.507 30.769 0.00 0.00 33.05 3.27
856 873 6.378582 TCAGGCTTCGATGTTTAACAAATTC 58.621 36.000 0.66 0.00 0.00 2.17
868 885 4.325472 GCAGAAATTTTTCAGGCTTCGATG 59.675 41.667 5.88 0.00 39.61 3.84
876 893 4.450080 GCTGGAAAGCAGAAATTTTTCAGG 59.550 41.667 5.88 0.00 39.61 3.86
880 897 4.101430 TCTGGCTGGAAAGCAGAAATTTTT 59.899 37.500 0.00 0.00 36.33 1.94
955 972 3.838244 AGGGTTTTCTTTTGGGCTTTC 57.162 42.857 0.00 0.00 0.00 2.62
959 977 1.765904 TGGAAGGGTTTTCTTTTGGGC 59.234 47.619 0.00 0.00 0.00 5.36
989 1007 1.955458 AAGAGGCGAGGGGGAGAGAT 61.955 60.000 0.00 0.00 0.00 2.75
1084 1102 3.578272 CGAGCGGACGAGGAGGAG 61.578 72.222 0.00 0.00 35.09 3.69
1145 1163 8.355913 ACAAAAAGAGAAAGAAATAGGCTTGAG 58.644 33.333 0.00 0.00 0.00 3.02
1148 1166 7.922811 CACACAAAAAGAGAAAGAAATAGGCTT 59.077 33.333 0.00 0.00 0.00 4.35
1149 1167 7.068716 ACACACAAAAAGAGAAAGAAATAGGCT 59.931 33.333 0.00 0.00 0.00 4.58
1150 1168 7.203218 ACACACAAAAAGAGAAAGAAATAGGC 58.797 34.615 0.00 0.00 0.00 3.93
1158 1176 5.444481 CGGCAAAACACACAAAAAGAGAAAG 60.444 40.000 0.00 0.00 0.00 2.62
1159 1177 4.387256 CGGCAAAACACACAAAAAGAGAAA 59.613 37.500 0.00 0.00 0.00 2.52
1162 1180 2.029124 GCGGCAAAACACACAAAAAGAG 59.971 45.455 0.00 0.00 0.00 2.85
1180 1198 3.019564 AGAAATCAGGAAAAGGATGCGG 58.980 45.455 0.00 0.00 0.00 5.69
1188 1206 6.512297 CGGAAAGGAAAAGAAATCAGGAAAA 58.488 36.000 0.00 0.00 0.00 2.29
1191 1209 3.506067 GCGGAAAGGAAAAGAAATCAGGA 59.494 43.478 0.00 0.00 0.00 3.86
1265 1283 0.544120 GGGGTGGGAAGGCATCAAAA 60.544 55.000 0.00 0.00 0.00 2.44
1280 1298 2.452491 ACTTTGCCTGGGAGGGGT 60.452 61.111 0.00 0.00 35.37 4.95
1351 1376 7.765307 TCAAGAAAGCTGCTTTATTAATCCAG 58.235 34.615 28.17 17.66 33.45 3.86
1451 1477 2.967615 GCCCGCACGGAGCTAATC 60.968 66.667 11.42 0.00 42.61 1.75
1522 1586 4.198028 AGCTAAAGTAACCCTGTAACCG 57.802 45.455 0.00 0.00 0.00 4.44
1527 1591 4.652822 CAAGGAAGCTAAAGTAACCCTGT 58.347 43.478 0.00 0.00 0.00 4.00
1601 1665 7.872993 TGACTAACACACTAAAATGGAAGAGAG 59.127 37.037 0.00 0.00 0.00 3.20
1629 1693 7.633789 ACTTGACCTAATTACATGAACCTCAT 58.366 34.615 0.00 0.00 37.65 2.90
1669 1733 4.350368 TCACTGCAGAACCATCAACTAA 57.650 40.909 23.35 0.00 0.00 2.24
1789 1855 2.899900 TCTTCTCCACTGAGCAGCTAAA 59.100 45.455 0.00 0.00 38.58 1.85
1892 1963 3.007398 AGCTAGAGAAGGGTTCAGTTGTG 59.993 47.826 0.00 0.00 0.00 3.33
1923 1994 5.699458 AGAAACTGTATTTAGTGAACCGGTG 59.301 40.000 8.52 0.00 0.00 4.94
2137 2208 4.019321 ACAGAGAAATGGTAGGCTGCTAAA 60.019 41.667 1.79 0.00 0.00 1.85
2144 2215 6.759497 AAACATAACAGAGAAATGGTAGGC 57.241 37.500 0.00 0.00 27.17 3.93
2149 2315 7.921786 TCCACTAAACATAACAGAGAAATGG 57.078 36.000 0.00 0.00 0.00 3.16
2155 2321 6.344500 AGCTCATCCACTAAACATAACAGAG 58.656 40.000 0.00 0.00 0.00 3.35
2326 2497 3.940209 ATGCCATTTCAAACACGATGT 57.060 38.095 0.00 0.00 0.00 3.06
2327 2498 5.375717 CAAAATGCCATTTCAAACACGATG 58.624 37.500 2.61 0.00 0.00 3.84
2328 2499 4.451774 CCAAAATGCCATTTCAAACACGAT 59.548 37.500 2.61 0.00 0.00 3.73
2329 2500 3.806521 CCAAAATGCCATTTCAAACACGA 59.193 39.130 2.61 0.00 0.00 4.35
2330 2501 3.806521 TCCAAAATGCCATTTCAAACACG 59.193 39.130 2.61 0.00 0.00 4.49
2370 2565 7.561251 TGGACTATTGCTGCAATTAGTAACTA 58.439 34.615 30.35 15.30 35.54 2.24
2376 2571 6.441093 TTCTTGGACTATTGCTGCAATTAG 57.559 37.500 30.35 24.31 35.54 1.73
2428 2623 6.183360 CCTGTAAAAATTCAACTGAACCAGGT 60.183 38.462 0.00 0.00 36.80 4.00
2465 2660 7.923414 GGATTCACCTACAAATGAAACTACT 57.077 36.000 0.00 0.00 38.29 2.57
2500 2695 3.925379 TGACATAGCGGCAACCTATATG 58.075 45.455 1.45 2.97 31.44 1.78
2501 2696 4.826274 ATGACATAGCGGCAACCTATAT 57.174 40.909 1.45 0.00 31.44 0.86
2541 2737 3.930336 ACGAAAAGAGCATCAGATGTCA 58.070 40.909 12.18 0.00 37.82 3.58
2561 2757 4.449405 GTCTGTGTCAGCCTTAAGAGAAAC 59.551 45.833 3.36 5.15 0.00 2.78
2664 2860 3.604875 AGTATGTGTTTACCCAGGTCG 57.395 47.619 0.00 0.00 0.00 4.79
2787 2983 4.664150 TCAAAAGATCCACCAAAACACC 57.336 40.909 0.00 0.00 0.00 4.16
2794 2990 6.208599 GGTATGAAAGTTCAAAAGATCCACCA 59.791 38.462 0.00 0.00 41.13 4.17
2802 2998 6.089249 AGGCTTGGTATGAAAGTTCAAAAG 57.911 37.500 0.00 2.31 41.13 2.27
2804 3000 6.065374 TGTAGGCTTGGTATGAAAGTTCAAA 58.935 36.000 0.00 0.00 41.13 2.69
2806 3002 5.235850 TGTAGGCTTGGTATGAAAGTTCA 57.764 39.130 0.00 0.00 42.14 3.18
2807 3003 6.759497 AATGTAGGCTTGGTATGAAAGTTC 57.241 37.500 0.00 0.00 0.00 3.01
2808 3004 8.052748 TGATAATGTAGGCTTGGTATGAAAGTT 58.947 33.333 0.00 0.00 0.00 2.66
2809 3005 7.573710 TGATAATGTAGGCTTGGTATGAAAGT 58.426 34.615 0.00 0.00 0.00 2.66
2810 3006 8.627208 ATGATAATGTAGGCTTGGTATGAAAG 57.373 34.615 0.00 0.00 0.00 2.62
2814 3015 7.012704 GCCATATGATAATGTAGGCTTGGTATG 59.987 40.741 3.65 0.00 37.67 2.39
2892 3093 2.512476 GAGGGGGCTAAAAGGGAACATA 59.488 50.000 0.00 0.00 0.00 2.29
2908 3109 0.955919 GGAGCGACAAACAAGAGGGG 60.956 60.000 0.00 0.00 0.00 4.79
2912 3113 1.266718 GCATTGGAGCGACAAACAAGA 59.733 47.619 0.34 0.00 33.48 3.02
2978 3179 4.466015 CCCAATACAAAACCTGGTAAGCAT 59.534 41.667 0.00 0.00 0.00 3.79
3071 3272 7.378181 TGATGCAAAAAGGAGGAAATTTACTC 58.622 34.615 20.53 20.53 37.42 2.59
3095 3296 9.280174 TCATAGAGTAAAACAAAACCCTACTTG 57.720 33.333 0.00 0.00 0.00 3.16
3112 3313 3.643320 CAGTCAGGGGCAATCATAGAGTA 59.357 47.826 0.00 0.00 0.00 2.59
3327 3533 7.233389 AGTATGTTCTTCAGAGCAGTAAAGA 57.767 36.000 0.00 0.00 38.62 2.52
3328 3534 6.533367 GGAGTATGTTCTTCAGAGCAGTAAAG 59.467 42.308 0.00 0.00 38.62 1.85
3336 3542 4.336993 AGCTACGGAGTATGTTCTTCAGAG 59.663 45.833 0.00 0.00 44.56 3.35
3343 3549 3.067742 TGCCTAAGCTACGGAGTATGTTC 59.932 47.826 0.00 0.00 44.56 3.18
3352 3558 0.753262 ACCATCTGCCTAAGCTACGG 59.247 55.000 0.00 0.00 40.80 4.02
3354 3560 3.760580 ATCACCATCTGCCTAAGCTAC 57.239 47.619 0.00 0.00 40.80 3.58
3393 3599 4.554723 CGCCTGTAGTTGACAAGGAAAAAG 60.555 45.833 0.00 0.00 37.70 2.27
3416 3623 3.126831 GTCATCCTCATCGGTCACAATC 58.873 50.000 0.00 0.00 0.00 2.67
3437 3644 4.965814 ACCTATGTGCTATTGACTCCATG 58.034 43.478 0.00 0.00 0.00 3.66
3486 3693 6.113411 CCAATCAACTAGTAGTCGGGAAAAT 58.887 40.000 2.58 0.00 0.00 1.82
3510 3717 0.376852 TTCGCACAGTTCAGCAACAC 59.623 50.000 0.00 0.00 34.60 3.32
3527 3734 7.497249 AGCAAATATGTGAGAGGTATGTTCTTC 59.503 37.037 0.00 0.00 0.00 2.87
3536 3752 5.627182 AGATCAGCAAATATGTGAGAGGT 57.373 39.130 0.00 0.00 0.00 3.85
3537 3753 6.289834 AGAAGATCAGCAAATATGTGAGAGG 58.710 40.000 0.00 0.00 0.00 3.69
3538 3754 7.211573 AGAGAAGATCAGCAAATATGTGAGAG 58.788 38.462 0.00 0.00 0.00 3.20
3539 3755 7.122138 AGAGAAGATCAGCAAATATGTGAGA 57.878 36.000 0.00 0.00 0.00 3.27
3540 3756 7.711772 AGAAGAGAAGATCAGCAAATATGTGAG 59.288 37.037 0.00 0.00 0.00 3.51
3541 3757 7.563020 AGAAGAGAAGATCAGCAAATATGTGA 58.437 34.615 0.00 0.00 0.00 3.58
3542 3758 7.789273 AGAAGAGAAGATCAGCAAATATGTG 57.211 36.000 0.00 0.00 0.00 3.21
3543 3759 7.282675 CCAAGAAGAGAAGATCAGCAAATATGT 59.717 37.037 0.00 0.00 0.00 2.29
3544 3760 7.640852 CCAAGAAGAGAAGATCAGCAAATATG 58.359 38.462 0.00 0.00 0.00 1.78
3545 3761 6.262720 GCCAAGAAGAGAAGATCAGCAAATAT 59.737 38.462 0.00 0.00 0.00 1.28
3546 3762 5.587844 GCCAAGAAGAGAAGATCAGCAAATA 59.412 40.000 0.00 0.00 0.00 1.40
3547 3763 4.398673 GCCAAGAAGAGAAGATCAGCAAAT 59.601 41.667 0.00 0.00 0.00 2.32
3741 3958 7.624549 AGAAGCATCTATTGACTTTCCTAACA 58.375 34.615 0.00 0.00 32.88 2.41
3782 4003 2.734492 GCTCGTACCTGTATGTCACCAC 60.734 54.545 0.00 0.00 0.00 4.16
3916 4137 2.525629 TTGGGCGGTGACCTCTCA 60.526 61.111 0.00 0.00 0.00 3.27
3928 4149 1.163554 CTGTCAGCTTTCTCTTGGGC 58.836 55.000 0.00 0.00 0.00 5.36
3937 4158 3.580458 AGATGGTGTCTACTGTCAGCTTT 59.420 43.478 0.00 0.00 34.69 3.51
3965 4186 4.011698 GGGAACCGGAGCAAAATAGTTAA 58.988 43.478 9.46 0.00 40.86 2.01
4084 4308 2.032620 ACGACGGGATCAGCTAAGATT 58.967 47.619 0.00 0.00 0.00 2.40
4146 4370 5.348451 CGGCAATTTTCTCCCTGTAATTTTG 59.652 40.000 0.00 0.00 0.00 2.44
4147 4371 5.478407 CGGCAATTTTCTCCCTGTAATTTT 58.522 37.500 0.00 0.00 0.00 1.82
4219 4458 7.710907 GTGCAATAGTCATCTCCATGTAACTTA 59.289 37.037 0.00 0.00 0.00 2.24
4286 4525 2.334946 TGCCATCAGCCAAAGCGTC 61.335 57.895 0.00 0.00 46.67 5.19
4294 4533 0.674895 AGAAGAACGTGCCATCAGCC 60.675 55.000 0.00 0.00 42.71 4.85
4318 4557 4.530946 AGTACACTGGTGCAGGTATTAAGT 59.469 41.667 0.00 0.00 35.51 2.24
4336 4636 1.637553 AGGAACGGAGGGAGTAGTACA 59.362 52.381 2.52 0.00 0.00 2.90
4340 4640 6.667558 AATATTTAGGAACGGAGGGAGTAG 57.332 41.667 0.00 0.00 0.00 2.57
4341 4641 6.384886 ACAAATATTTAGGAACGGAGGGAGTA 59.615 38.462 0.00 0.00 0.00 2.59
4342 4642 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
4343 4643 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
4344 4644 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
4345 4645 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
4346 4646 7.625828 AAAGACAAATATTTAGGAACGGAGG 57.374 36.000 0.00 0.00 0.00 4.30
4363 4663 9.541143 GTTCATTTGAAATCCCTAAAAAGACAA 57.459 29.630 0.00 0.00 35.58 3.18
4364 4664 8.923270 AGTTCATTTGAAATCCCTAAAAAGACA 58.077 29.630 0.00 0.00 35.58 3.41
4367 4667 9.639601 GGTAGTTCATTTGAAATCCCTAAAAAG 57.360 33.333 0.00 0.00 35.58 2.27
4368 4668 9.148879 TGGTAGTTCATTTGAAATCCCTAAAAA 57.851 29.630 4.40 0.00 35.58 1.94
4369 4669 8.581578 GTGGTAGTTCATTTGAAATCCCTAAAA 58.418 33.333 4.40 0.00 35.58 1.52
4370 4670 7.726291 TGTGGTAGTTCATTTGAAATCCCTAAA 59.274 33.333 4.40 0.00 35.58 1.85
4371 4671 7.235079 TGTGGTAGTTCATTTGAAATCCCTAA 58.765 34.615 4.40 0.00 35.58 2.69
4372 4672 6.785076 TGTGGTAGTTCATTTGAAATCCCTA 58.215 36.000 4.40 0.00 35.58 3.53
4373 4673 5.640147 TGTGGTAGTTCATTTGAAATCCCT 58.360 37.500 4.40 0.00 35.58 4.20
4374 4674 5.975693 TGTGGTAGTTCATTTGAAATCCC 57.024 39.130 0.00 0.00 35.58 3.85
4375 4675 7.186804 CGTATGTGGTAGTTCATTTGAAATCC 58.813 38.462 0.00 0.63 35.58 3.01
4376 4676 7.065324 TCCGTATGTGGTAGTTCATTTGAAATC 59.935 37.037 0.00 0.00 35.58 2.17
4377 4677 6.882140 TCCGTATGTGGTAGTTCATTTGAAAT 59.118 34.615 0.00 0.00 35.58 2.17
4378 4678 6.231951 TCCGTATGTGGTAGTTCATTTGAAA 58.768 36.000 0.00 0.00 35.58 2.69
4379 4679 5.795972 TCCGTATGTGGTAGTTCATTTGAA 58.204 37.500 0.00 0.00 0.00 2.69
4380 4680 5.408880 TCCGTATGTGGTAGTTCATTTGA 57.591 39.130 0.00 0.00 0.00 2.69
4381 4681 5.584649 ACATCCGTATGTGGTAGTTCATTTG 59.415 40.000 0.00 0.00 44.79 2.32
4382 4682 5.741011 ACATCCGTATGTGGTAGTTCATTT 58.259 37.500 0.00 0.00 44.79 2.32
4383 4683 5.353394 ACATCCGTATGTGGTAGTTCATT 57.647 39.130 0.00 0.00 44.79 2.57
4384 4684 6.665992 ATACATCCGTATGTGGTAGTTCAT 57.334 37.500 3.56 0.00 45.99 2.57
4385 4685 7.770366 ATATACATCCGTATGTGGTAGTTCA 57.230 36.000 3.56 0.00 45.99 3.18
4386 4686 9.170734 TCTATATACATCCGTATGTGGTAGTTC 57.829 37.037 3.56 0.00 45.99 3.01
4387 4687 8.954350 GTCTATATACATCCGTATGTGGTAGTT 58.046 37.037 3.56 0.00 45.99 2.24
4388 4688 8.105197 TGTCTATATACATCCGTATGTGGTAGT 58.895 37.037 3.56 0.00 45.99 2.73
4389 4689 8.502105 TGTCTATATACATCCGTATGTGGTAG 57.498 38.462 3.56 3.93 45.99 3.18
4391 4691 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
4421 4721 9.282569 GGAGCAAAATGAATGAATCTATACTCT 57.717 33.333 0.00 0.00 0.00 3.24
4422 4722 9.060347 TGGAGCAAAATGAATGAATCTATACTC 57.940 33.333 0.00 0.00 0.00 2.59
4423 4723 8.985315 TGGAGCAAAATGAATGAATCTATACT 57.015 30.769 0.00 0.00 0.00 2.12
4427 4727 9.358406 ACATATGGAGCAAAATGAATGAATCTA 57.642 29.630 7.80 0.00 0.00 1.98
4428 4728 8.246430 ACATATGGAGCAAAATGAATGAATCT 57.754 30.769 7.80 0.00 0.00 2.40
4429 4729 9.622004 CTACATATGGAGCAAAATGAATGAATC 57.378 33.333 0.89 0.00 0.00 2.52
4430 4730 9.139734 ACTACATATGGAGCAAAATGAATGAAT 57.860 29.630 15.30 0.00 0.00 2.57
4431 4731 8.523915 ACTACATATGGAGCAAAATGAATGAA 57.476 30.769 15.30 0.00 0.00 2.57
4432 4732 7.774625 TGACTACATATGGAGCAAAATGAATGA 59.225 33.333 15.30 0.00 0.00 2.57
4433 4733 7.859377 GTGACTACATATGGAGCAAAATGAATG 59.141 37.037 15.30 0.00 0.00 2.67
4434 4734 7.776969 AGTGACTACATATGGAGCAAAATGAAT 59.223 33.333 15.30 0.00 0.00 2.57
4435 4735 7.112122 AGTGACTACATATGGAGCAAAATGAA 58.888 34.615 15.30 0.00 0.00 2.57
4436 4736 6.653020 AGTGACTACATATGGAGCAAAATGA 58.347 36.000 15.30 0.00 0.00 2.57
4437 4737 6.932356 AGTGACTACATATGGAGCAAAATG 57.068 37.500 15.30 0.00 0.00 2.32
4438 4738 6.886459 ACAAGTGACTACATATGGAGCAAAAT 59.114 34.615 15.30 0.00 0.00 1.82
4439 4739 6.237901 ACAAGTGACTACATATGGAGCAAAA 58.762 36.000 15.30 0.00 0.00 2.44
4440 4740 5.804639 ACAAGTGACTACATATGGAGCAAA 58.195 37.500 15.30 0.00 0.00 3.68
4441 4741 5.420725 ACAAGTGACTACATATGGAGCAA 57.579 39.130 15.30 0.16 0.00 3.91
4442 4742 5.046663 TCAACAAGTGACTACATATGGAGCA 60.047 40.000 15.30 10.95 0.00 4.26
4443 4743 5.419542 TCAACAAGTGACTACATATGGAGC 58.580 41.667 15.30 8.47 0.00 4.70
4444 4744 7.905604 TTTCAACAAGTGACTACATATGGAG 57.094 36.000 13.77 13.77 35.39 3.86
4456 4756 9.996554 TGTCTTTCTAGATATTTCAACAAGTGA 57.003 29.630 0.00 0.00 31.86 3.41
4471 4771 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
4472 4772 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
4473 4773 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
4474 4774 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
4475 4775 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
4476 4776 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
4477 4777 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
4478 4778 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
4479 4779 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
4480 4780 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
4481 4781 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
4482 4782 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
4483 4783 7.628501 AATACTCCCTCCGTTCCTAAATATT 57.371 36.000 0.00 0.00 0.00 1.28
4484 4784 7.256583 GGAAATACTCCCTCCGTTCCTAAATAT 60.257 40.741 0.00 0.00 38.44 1.28
4485 4785 6.042437 GGAAATACTCCCTCCGTTCCTAAATA 59.958 42.308 0.00 0.00 38.44 1.40
4486 4786 5.163227 GGAAATACTCCCTCCGTTCCTAAAT 60.163 44.000 0.00 0.00 38.44 1.40
4487 4787 4.162888 GGAAATACTCCCTCCGTTCCTAAA 59.837 45.833 0.00 0.00 38.44 1.85
4488 4788 3.708121 GGAAATACTCCCTCCGTTCCTAA 59.292 47.826 0.00 0.00 38.44 2.69
4489 4789 3.052338 AGGAAATACTCCCTCCGTTCCTA 60.052 47.826 0.95 0.00 46.81 2.94
4490 4790 2.117051 GGAAATACTCCCTCCGTTCCT 58.883 52.381 0.00 0.00 38.44 3.36
4491 4791 2.117051 AGGAAATACTCCCTCCGTTCC 58.883 52.381 0.00 0.00 46.81 3.62
4492 4792 3.703052 TGTAGGAAATACTCCCTCCGTTC 59.297 47.826 0.00 0.00 46.81 3.95
4493 4793 3.450096 GTGTAGGAAATACTCCCTCCGTT 59.550 47.826 0.00 0.00 46.81 4.44
4494 4794 3.029570 GTGTAGGAAATACTCCCTCCGT 58.970 50.000 0.00 0.00 46.81 4.69
4495 4795 2.364647 GGTGTAGGAAATACTCCCTCCG 59.635 54.545 0.00 0.00 46.81 4.63
4496 4796 2.364647 CGGTGTAGGAAATACTCCCTCC 59.635 54.545 0.00 0.00 46.81 4.30
4497 4797 3.067883 GTCGGTGTAGGAAATACTCCCTC 59.932 52.174 0.00 0.00 46.81 4.30
4498 4798 3.029570 GTCGGTGTAGGAAATACTCCCT 58.970 50.000 0.00 0.00 46.81 4.20
4499 4799 2.223665 CGTCGGTGTAGGAAATACTCCC 60.224 54.545 1.67 0.00 46.81 4.30
4500 4800 2.223665 CCGTCGGTGTAGGAAATACTCC 60.224 54.545 2.08 0.00 45.81 3.85
4501 4801 2.684881 TCCGTCGGTGTAGGAAATACTC 59.315 50.000 11.88 0.00 35.24 2.59
4502 4802 2.424956 GTCCGTCGGTGTAGGAAATACT 59.575 50.000 11.88 0.00 35.60 2.12
4503 4803 2.424956 AGTCCGTCGGTGTAGGAAATAC 59.575 50.000 11.88 0.00 35.60 1.89
4504 4804 2.424601 CAGTCCGTCGGTGTAGGAAATA 59.575 50.000 11.88 0.00 35.60 1.40
4505 4805 1.203994 CAGTCCGTCGGTGTAGGAAAT 59.796 52.381 11.88 0.00 35.60 2.17
4518 4818 3.812019 CGCTCTACGCCAGTCCGT 61.812 66.667 0.00 0.00 44.62 4.69
4535 4835 6.561945 TTTTCACATTTTCTGTACGTTTGC 57.438 33.333 0.00 0.00 35.91 3.68
4563 4863 2.943036 ACGAAACCCACAACCTGTAT 57.057 45.000 0.00 0.00 0.00 2.29
4567 4867 3.732212 GTACTAACGAAACCCACAACCT 58.268 45.455 0.00 0.00 0.00 3.50
4588 4888 3.507103 TTCATGATGGCATTGGTTTCG 57.493 42.857 0.00 0.00 30.68 3.46
4596 4896 6.938030 AGTTTTCACATTTTTCATGATGGCAT 59.062 30.769 0.00 0.00 34.29 4.40
4700 5000 5.526506 AAACAGAAATTGCTCTGCTTTCT 57.473 34.783 7.00 0.00 45.72 2.52
4785 5087 3.176411 TCATACATAGGGGAGCTGATGG 58.824 50.000 0.00 0.00 0.00 3.51
4876 5178 3.751479 AGGATGGGAAAAACAAGCAAC 57.249 42.857 0.00 0.00 0.00 4.17
4896 5198 2.357637 GGCACAGACTGTTGCTAACAAA 59.642 45.455 21.41 0.00 41.61 2.83
4960 5262 9.884465 GGATGTAGTATTTGTTATGAAATGAGC 57.116 33.333 0.00 0.00 0.00 4.26
4972 5274 9.295825 TGTTCAATCTTTGGATGTAGTATTTGT 57.704 29.630 0.00 0.00 31.75 2.83
4975 5277 8.960591 CCTTGTTCAATCTTTGGATGTAGTATT 58.039 33.333 0.00 0.00 31.75 1.89
4976 5278 7.557719 CCCTTGTTCAATCTTTGGATGTAGTAT 59.442 37.037 0.00 0.00 31.75 2.12
4977 5279 6.884295 CCCTTGTTCAATCTTTGGATGTAGTA 59.116 38.462 0.00 0.00 31.75 1.82
4978 5280 5.711976 CCCTTGTTCAATCTTTGGATGTAGT 59.288 40.000 0.00 0.00 31.75 2.73
4979 5281 5.945784 TCCCTTGTTCAATCTTTGGATGTAG 59.054 40.000 0.00 0.00 31.75 2.74
4980 5282 5.886609 TCCCTTGTTCAATCTTTGGATGTA 58.113 37.500 0.00 0.00 31.75 2.29
4981 5283 4.739793 TCCCTTGTTCAATCTTTGGATGT 58.260 39.130 0.00 0.00 31.75 3.06
4982 5284 4.159135 CCTCCCTTGTTCAATCTTTGGATG 59.841 45.833 0.00 0.00 31.75 3.51
4983 5285 4.202716 ACCTCCCTTGTTCAATCTTTGGAT 60.203 41.667 0.00 0.00 0.00 3.41
4984 5286 3.140144 ACCTCCCTTGTTCAATCTTTGGA 59.860 43.478 0.00 0.00 0.00 3.53
4985 5287 3.500343 ACCTCCCTTGTTCAATCTTTGG 58.500 45.455 0.00 0.00 0.00 3.28
4986 5288 4.144297 TGACCTCCCTTGTTCAATCTTTG 58.856 43.478 0.00 0.00 0.00 2.77
4987 5289 4.453480 TGACCTCCCTTGTTCAATCTTT 57.547 40.909 0.00 0.00 0.00 2.52
4988 5290 4.145052 GTTGACCTCCCTTGTTCAATCTT 58.855 43.478 0.00 0.00 0.00 2.40
4989 5291 3.138283 TGTTGACCTCCCTTGTTCAATCT 59.862 43.478 0.00 0.00 0.00 2.40
4990 5292 3.486383 TGTTGACCTCCCTTGTTCAATC 58.514 45.455 0.00 0.00 0.00 2.67
4991 5293 3.593442 TGTTGACCTCCCTTGTTCAAT 57.407 42.857 0.00 0.00 0.00 2.57
4992 5294 3.374042 TTGTTGACCTCCCTTGTTCAA 57.626 42.857 0.00 0.00 0.00 2.69
4993 5295 3.374042 TTTGTTGACCTCCCTTGTTCA 57.626 42.857 0.00 0.00 0.00 3.18
4994 5296 6.399639 TTTATTTGTTGACCTCCCTTGTTC 57.600 37.500 0.00 0.00 0.00 3.18
4995 5297 6.155393 TGTTTTATTTGTTGACCTCCCTTGTT 59.845 34.615 0.00 0.00 0.00 2.83
4996 5298 5.659079 TGTTTTATTTGTTGACCTCCCTTGT 59.341 36.000 0.00 0.00 0.00 3.16
4997 5299 6.155475 TGTTTTATTTGTTGACCTCCCTTG 57.845 37.500 0.00 0.00 0.00 3.61
4998 5300 6.800072 TTGTTTTATTTGTTGACCTCCCTT 57.200 33.333 0.00 0.00 0.00 3.95
4999 5301 6.800072 TTTGTTTTATTTGTTGACCTCCCT 57.200 33.333 0.00 0.00 0.00 4.20
5000 5302 8.445275 AAATTTGTTTTATTTGTTGACCTCCC 57.555 30.769 0.00 0.00 0.00 4.30
5009 5311 9.462606 TGGGTTGGTTAAATTTGTTTTATTTGT 57.537 25.926 0.00 0.00 30.03 2.83
5010 5312 9.723447 GTGGGTTGGTTAAATTTGTTTTATTTG 57.277 29.630 0.00 0.00 30.03 2.32
5011 5313 9.462606 TGTGGGTTGGTTAAATTTGTTTTATTT 57.537 25.926 0.00 0.00 30.03 1.40
5012 5314 9.462606 TTGTGGGTTGGTTAAATTTGTTTTATT 57.537 25.926 0.00 0.00 30.03 1.40
5013 5315 9.634021 ATTGTGGGTTGGTTAAATTTGTTTTAT 57.366 25.926 0.00 0.00 30.03 1.40
5014 5316 9.110502 GATTGTGGGTTGGTTAAATTTGTTTTA 57.889 29.630 0.00 0.00 0.00 1.52
5015 5317 7.067615 GGATTGTGGGTTGGTTAAATTTGTTTT 59.932 33.333 0.00 0.00 0.00 2.43
5016 5318 6.544197 GGATTGTGGGTTGGTTAAATTTGTTT 59.456 34.615 0.00 0.00 0.00 2.83
5017 5319 6.058833 GGATTGTGGGTTGGTTAAATTTGTT 58.941 36.000 0.00 0.00 0.00 2.83
5018 5320 5.131142 TGGATTGTGGGTTGGTTAAATTTGT 59.869 36.000 0.00 0.00 0.00 2.83
5019 5321 5.615289 TGGATTGTGGGTTGGTTAAATTTG 58.385 37.500 0.00 0.00 0.00 2.32
5020 5322 5.896073 TGGATTGTGGGTTGGTTAAATTT 57.104 34.783 0.00 0.00 0.00 1.82
5021 5323 6.728632 AGTATGGATTGTGGGTTGGTTAAATT 59.271 34.615 0.00 0.00 0.00 1.82
5022 5324 6.260663 AGTATGGATTGTGGGTTGGTTAAAT 58.739 36.000 0.00 0.00 0.00 1.40
5023 5325 5.646215 AGTATGGATTGTGGGTTGGTTAAA 58.354 37.500 0.00 0.00 0.00 1.52
5024 5326 5.014755 AGAGTATGGATTGTGGGTTGGTTAA 59.985 40.000 0.00 0.00 0.00 2.01
5025 5327 4.538490 AGAGTATGGATTGTGGGTTGGTTA 59.462 41.667 0.00 0.00 0.00 2.85
5026 5328 3.333680 AGAGTATGGATTGTGGGTTGGTT 59.666 43.478 0.00 0.00 0.00 3.67
5027 5329 2.919602 AGAGTATGGATTGTGGGTTGGT 59.080 45.455 0.00 0.00 0.00 3.67
5028 5330 3.652057 AGAGTATGGATTGTGGGTTGG 57.348 47.619 0.00 0.00 0.00 3.77
5029 5331 5.982890 AAAAGAGTATGGATTGTGGGTTG 57.017 39.130 0.00 0.00 0.00 3.77
5052 5354 9.255304 GAATAAAGTGTGCCATAAGTTCAAAAA 57.745 29.630 0.00 0.00 0.00 1.94
5053 5355 8.417106 TGAATAAAGTGTGCCATAAGTTCAAAA 58.583 29.630 0.00 0.00 0.00 2.44
5054 5356 7.946207 TGAATAAAGTGTGCCATAAGTTCAAA 58.054 30.769 0.00 0.00 0.00 2.69
5055 5357 7.517614 TGAATAAAGTGTGCCATAAGTTCAA 57.482 32.000 0.00 0.00 0.00 2.69
5056 5358 7.517614 TTGAATAAAGTGTGCCATAAGTTCA 57.482 32.000 0.00 0.00 0.00 3.18
5057 5359 8.243426 TGATTGAATAAAGTGTGCCATAAGTTC 58.757 33.333 0.00 0.00 0.00 3.01
5058 5360 8.121305 TGATTGAATAAAGTGTGCCATAAGTT 57.879 30.769 0.00 0.00 0.00 2.66
5059 5361 7.701539 TGATTGAATAAAGTGTGCCATAAGT 57.298 32.000 0.00 0.00 0.00 2.24
5060 5362 8.984891 TTTGATTGAATAAAGTGTGCCATAAG 57.015 30.769 0.00 0.00 0.00 1.73
5061 5363 9.368674 CATTTGATTGAATAAAGTGTGCCATAA 57.631 29.630 0.00 0.00 0.00 1.90
5062 5364 8.747471 TCATTTGATTGAATAAAGTGTGCCATA 58.253 29.630 0.00 0.00 0.00 2.74
5063 5365 7.613585 TCATTTGATTGAATAAAGTGTGCCAT 58.386 30.769 0.00 0.00 0.00 4.40
5064 5366 6.990798 TCATTTGATTGAATAAAGTGTGCCA 58.009 32.000 0.00 0.00 0.00 4.92
5065 5367 7.887996 TTCATTTGATTGAATAAAGTGTGCC 57.112 32.000 0.00 0.00 30.82 5.01
5091 5393 9.639601 CTGAACTTGTTAGTGATGTAACAGATA 57.360 33.333 0.00 0.00 42.44 1.98
5092 5394 7.118390 GCTGAACTTGTTAGTGATGTAACAGAT 59.882 37.037 0.00 0.00 42.44 2.90
5093 5395 6.423905 GCTGAACTTGTTAGTGATGTAACAGA 59.576 38.462 0.00 0.00 42.44 3.41
5094 5396 6.425114 AGCTGAACTTGTTAGTGATGTAACAG 59.575 38.462 0.00 0.00 42.44 3.16
5095 5397 6.288294 AGCTGAACTTGTTAGTGATGTAACA 58.712 36.000 0.00 0.00 40.40 2.41
5096 5398 6.787085 AGCTGAACTTGTTAGTGATGTAAC 57.213 37.500 0.00 0.00 34.01 2.50
5097 5399 7.039293 TCCTAGCTGAACTTGTTAGTGATGTAA 60.039 37.037 0.00 0.00 34.01 2.41
5098 5400 6.436218 TCCTAGCTGAACTTGTTAGTGATGTA 59.564 38.462 0.00 0.00 34.01 2.29
5099 5401 5.246203 TCCTAGCTGAACTTGTTAGTGATGT 59.754 40.000 0.00 0.00 34.01 3.06
5100 5402 5.724328 TCCTAGCTGAACTTGTTAGTGATG 58.276 41.667 0.00 0.00 34.01 3.07
5101 5403 6.552445 ATCCTAGCTGAACTTGTTAGTGAT 57.448 37.500 0.00 0.00 34.01 3.06
5102 5404 7.476540 TTATCCTAGCTGAACTTGTTAGTGA 57.523 36.000 0.00 0.00 34.01 3.41
5103 5405 8.200792 AGATTATCCTAGCTGAACTTGTTAGTG 58.799 37.037 0.00 0.00 34.01 2.74
5104 5406 8.200792 CAGATTATCCTAGCTGAACTTGTTAGT 58.799 37.037 0.00 0.00 35.68 2.24
5105 5407 7.170658 GCAGATTATCCTAGCTGAACTTGTTAG 59.829 40.741 0.00 0.00 0.00 2.34
5106 5408 6.986817 GCAGATTATCCTAGCTGAACTTGTTA 59.013 38.462 0.00 0.00 0.00 2.41
5107 5409 5.819901 GCAGATTATCCTAGCTGAACTTGTT 59.180 40.000 0.00 0.00 0.00 2.83
5108 5410 5.363939 GCAGATTATCCTAGCTGAACTTGT 58.636 41.667 0.00 0.00 0.00 3.16
5109 5411 4.447054 CGCAGATTATCCTAGCTGAACTTG 59.553 45.833 0.00 0.00 0.00 3.16
5110 5412 4.502259 CCGCAGATTATCCTAGCTGAACTT 60.502 45.833 0.00 0.00 0.00 2.66
5111 5413 3.006323 CCGCAGATTATCCTAGCTGAACT 59.994 47.826 0.00 0.00 0.00 3.01
5112 5414 3.005897 TCCGCAGATTATCCTAGCTGAAC 59.994 47.826 0.00 0.00 0.00 3.18
5113 5415 3.230976 TCCGCAGATTATCCTAGCTGAA 58.769 45.455 0.00 0.00 0.00 3.02
5114 5416 2.822561 CTCCGCAGATTATCCTAGCTGA 59.177 50.000 0.00 0.00 0.00 4.26
5115 5417 2.094286 CCTCCGCAGATTATCCTAGCTG 60.094 54.545 0.00 0.00 0.00 4.24
5116 5418 2.175202 CCTCCGCAGATTATCCTAGCT 58.825 52.381 0.00 0.00 0.00 3.32
5117 5419 2.171840 TCCTCCGCAGATTATCCTAGC 58.828 52.381 0.00 0.00 0.00 3.42
5118 5420 4.019858 TGATCCTCCGCAGATTATCCTAG 58.980 47.826 0.00 0.00 0.00 3.02
5119 5421 3.764434 GTGATCCTCCGCAGATTATCCTA 59.236 47.826 0.00 0.00 0.00 2.94
5120 5422 2.564947 GTGATCCTCCGCAGATTATCCT 59.435 50.000 0.00 0.00 0.00 3.24
5121 5423 2.354203 GGTGATCCTCCGCAGATTATCC 60.354 54.545 0.00 0.00 0.00 2.59
5122 5424 2.354203 GGGTGATCCTCCGCAGATTATC 60.354 54.545 0.00 0.00 0.00 1.75
5123 5425 1.625818 GGGTGATCCTCCGCAGATTAT 59.374 52.381 0.00 0.00 0.00 1.28
5124 5426 1.048601 GGGTGATCCTCCGCAGATTA 58.951 55.000 0.00 0.00 0.00 1.75
5125 5427 0.692419 AGGGTGATCCTCCGCAGATT 60.692 55.000 0.00 0.00 44.06 2.40
5126 5428 1.074926 AGGGTGATCCTCCGCAGAT 60.075 57.895 0.00 0.00 44.06 2.90
5127 5429 2.364560 AGGGTGATCCTCCGCAGA 59.635 61.111 0.00 0.00 44.06 4.26
5135 5437 3.388552 AATTTCTTGGGAGGGTGATCC 57.611 47.619 0.00 0.00 38.76 3.36
5136 5438 4.855340 TGTAATTTCTTGGGAGGGTGATC 58.145 43.478 0.00 0.00 0.00 2.92
5137 5439 4.540099 TCTGTAATTTCTTGGGAGGGTGAT 59.460 41.667 0.00 0.00 0.00 3.06
5138 5440 3.913799 TCTGTAATTTCTTGGGAGGGTGA 59.086 43.478 0.00 0.00 0.00 4.02
5139 5441 4.301072 TCTGTAATTTCTTGGGAGGGTG 57.699 45.455 0.00 0.00 0.00 4.61
5140 5442 5.536497 ATTCTGTAATTTCTTGGGAGGGT 57.464 39.130 0.00 0.00 0.00 4.34
5141 5443 7.346471 TCTAATTCTGTAATTTCTTGGGAGGG 58.654 38.462 0.00 0.00 36.67 4.30
5142 5444 8.807948 TTCTAATTCTGTAATTTCTTGGGAGG 57.192 34.615 0.00 0.00 36.67 4.30
5144 5446 9.973661 TGATTCTAATTCTGTAATTTCTTGGGA 57.026 29.630 0.00 0.00 36.67 4.37


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.