Multiple sequence alignment - TraesCS1A01G111400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G111400 chr1A 100.000 2349 0 0 1 2349 112776324 112778672 0.000000e+00 4338
1 TraesCS1A01G111400 chr1A 98.030 203 4 0 2124 2326 283770425 283770223 1.030000e-93 353
2 TraesCS1A01G111400 chr1A 94.323 229 13 0 1897 2125 187362504 187362276 3.710000e-93 351
3 TraesCS1A01G111400 chr1A 94.977 219 9 2 2110 2328 181215367 181215583 2.240000e-90 342
4 TraesCS1A01G111400 chr5D 99.177 1336 8 2 1 1335 240137415 240136082 0.000000e+00 2403
5 TraesCS1A01G111400 chr5D 98.652 1335 14 3 1 1335 6201570 6202900 0.000000e+00 2362
6 TraesCS1A01G111400 chr3B 98.503 1336 17 2 1 1335 201512837 201511504 0.000000e+00 2353
7 TraesCS1A01G111400 chr3B 98.936 564 6 0 1335 1898 94233833 94233270 0.000000e+00 1009
8 TraesCS1A01G111400 chr3D 98.429 1337 15 5 1 1335 21904334 21903002 0.000000e+00 2348
9 TraesCS1A01G111400 chr6B 98.204 1336 21 2 1 1335 22425653 22424320 0.000000e+00 2331
10 TraesCS1A01G111400 chr6B 98.936 564 6 0 1335 1898 185805530 185804967 0.000000e+00 1009
11 TraesCS1A01G111400 chr6B 98.936 564 6 0 1335 1898 521769962 521769399 0.000000e+00 1009
12 TraesCS1A01G111400 chr1D 98.003 1352 8 4 1 1335 19957742 19956393 0.000000e+00 2329
13 TraesCS1A01G111400 chr1D 98.204 1336 10 8 1 1335 254497706 254496384 0.000000e+00 2322
14 TraesCS1A01G111400 chr1D 99.122 683 4 1 1 683 206072130 206072810 0.000000e+00 1227
15 TraesCS1A01G111400 chr4D 97.455 1336 30 4 1 1335 19916206 19914874 0.000000e+00 2276
16 TraesCS1A01G111400 chr3A 96.713 943 21 3 403 1335 393224903 393223961 0.000000e+00 1561
17 TraesCS1A01G111400 chr3A 98.936 564 6 0 1335 1898 420710552 420709989 0.000000e+00 1009
18 TraesCS1A01G111400 chr7B 98.759 564 7 0 1335 1898 250785557 250784994 0.000000e+00 1003
19 TraesCS1A01G111400 chr5A 98.759 564 7 0 1335 1898 527933462 527932899 0.000000e+00 1003
20 TraesCS1A01G111400 chr5A 97.537 203 5 0 2124 2326 515153262 515153060 4.800000e-92 348
21 TraesCS1A01G111400 chr2A 98.759 564 7 0 1335 1898 378522648 378523211 0.000000e+00 1003
22 TraesCS1A01G111400 chr2A 98.759 564 7 0 1335 1898 668148142 668148705 0.000000e+00 1003
23 TraesCS1A01G111400 chr2A 95.633 229 10 0 1897 2125 464672408 464672636 3.690000e-98 368
24 TraesCS1A01G111400 chr2A 95.197 229 11 0 1897 2125 266997253 266997481 1.720000e-96 363
25 TraesCS1A01G111400 chr2A 94.323 229 13 0 1897 2125 169558887 169558659 3.710000e-93 351
26 TraesCS1A01G111400 chr2A 97.101 207 6 0 2122 2328 535682506 535682712 1.340000e-92 350
27 TraesCS1A01G111400 chr2A 97.537 203 5 0 2124 2326 583940354 583940556 4.800000e-92 348
28 TraesCS1A01G111400 chr5B 98.759 564 6 1 1335 1898 414284689 414284127 0.000000e+00 1002
29 TraesCS1A01G111400 chr4A 94.372 231 13 0 1895 2125 345662331 345662561 2.870000e-94 355
30 TraesCS1A01G111400 chr4A 94.323 229 13 0 1897 2125 303396021 303396249 3.710000e-93 351
31 TraesCS1A01G111400 chr6A 94.323 229 13 0 1897 2125 214105109 214104881 3.710000e-93 351
32 TraesCS1A01G111400 chr6A 94.323 229 13 0 1897 2125 346440586 346440358 3.710000e-93 351
33 TraesCS1A01G111400 chr6A 97.537 203 5 0 2124 2326 505605407 505605609 4.800000e-92 348
34 TraesCS1A01G111400 chr2D 93.966 232 14 0 1894 2125 390140159 390140390 3.710000e-93 351
35 TraesCS1A01G111400 chr7A 97.549 204 5 0 2123 2326 103879993 103879790 1.340000e-92 350
36 TraesCS1A01G111400 chr7A 97.561 205 4 1 2124 2328 337211048 337211251 1.340000e-92 350
37 TraesCS1A01G111400 chr7A 95.755 212 8 1 2115 2326 423225078 423225288 8.040000e-90 340
38 TraesCS1A01G111400 chr7D 96.875 64 1 1 1272 1335 231553194 231553132 3.190000e-19 106


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G111400 chr1A 112776324 112778672 2348 False 4338 4338 100.000 1 2349 1 chr1A.!!$F1 2348
1 TraesCS1A01G111400 chr5D 240136082 240137415 1333 True 2403 2403 99.177 1 1335 1 chr5D.!!$R1 1334
2 TraesCS1A01G111400 chr5D 6201570 6202900 1330 False 2362 2362 98.652 1 1335 1 chr5D.!!$F1 1334
3 TraesCS1A01G111400 chr3B 201511504 201512837 1333 True 2353 2353 98.503 1 1335 1 chr3B.!!$R2 1334
4 TraesCS1A01G111400 chr3B 94233270 94233833 563 True 1009 1009 98.936 1335 1898 1 chr3B.!!$R1 563
5 TraesCS1A01G111400 chr3D 21903002 21904334 1332 True 2348 2348 98.429 1 1335 1 chr3D.!!$R1 1334
6 TraesCS1A01G111400 chr6B 22424320 22425653 1333 True 2331 2331 98.204 1 1335 1 chr6B.!!$R1 1334
7 TraesCS1A01G111400 chr6B 185804967 185805530 563 True 1009 1009 98.936 1335 1898 1 chr6B.!!$R2 563
8 TraesCS1A01G111400 chr6B 521769399 521769962 563 True 1009 1009 98.936 1335 1898 1 chr6B.!!$R3 563
9 TraesCS1A01G111400 chr1D 19956393 19957742 1349 True 2329 2329 98.003 1 1335 1 chr1D.!!$R1 1334
10 TraesCS1A01G111400 chr1D 254496384 254497706 1322 True 2322 2322 98.204 1 1335 1 chr1D.!!$R2 1334
11 TraesCS1A01G111400 chr1D 206072130 206072810 680 False 1227 1227 99.122 1 683 1 chr1D.!!$F1 682
12 TraesCS1A01G111400 chr4D 19914874 19916206 1332 True 2276 2276 97.455 1 1335 1 chr4D.!!$R1 1334
13 TraesCS1A01G111400 chr3A 393223961 393224903 942 True 1561 1561 96.713 403 1335 1 chr3A.!!$R1 932
14 TraesCS1A01G111400 chr3A 420709989 420710552 563 True 1009 1009 98.936 1335 1898 1 chr3A.!!$R2 563
15 TraesCS1A01G111400 chr7B 250784994 250785557 563 True 1003 1003 98.759 1335 1898 1 chr7B.!!$R1 563
16 TraesCS1A01G111400 chr5A 527932899 527933462 563 True 1003 1003 98.759 1335 1898 1 chr5A.!!$R2 563
17 TraesCS1A01G111400 chr2A 378522648 378523211 563 False 1003 1003 98.759 1335 1898 1 chr2A.!!$F2 563
18 TraesCS1A01G111400 chr2A 668148142 668148705 563 False 1003 1003 98.759 1335 1898 1 chr2A.!!$F6 563
19 TraesCS1A01G111400 chr5B 414284127 414284689 562 True 1002 1002 98.759 1335 1898 1 chr5B.!!$R1 563

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
291 292 1.074072 CAACCACCCCACGAATCCA 59.926 57.895 0.0 0.0 0.0 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2113 2149 0.034477 AACCCCGACACCATGGAATC 60.034 55.0 21.47 14.05 0.0 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
291 292 1.074072 CAACCACCCCACGAATCCA 59.926 57.895 0.00 0.00 0.00 3.41
531 534 7.071321 TGGAAATACCCCTTTAGCAAAGAAAAA 59.929 33.333 9.37 0.00 38.09 1.94
1267 1273 0.179032 ATGCAAACGGTGACACCAGA 60.179 50.000 24.18 1.45 38.47 3.86
1268 1274 0.179032 TGCAAACGGTGACACCAGAT 60.179 50.000 24.18 9.10 38.47 2.90
1355 1391 2.223272 CGAGTTCATCCGTGAGAATCGA 60.223 50.000 0.00 0.00 38.61 3.59
1551 1587 8.695456 GTTTTATTATTGAGGTGTTCCATCCAT 58.305 33.333 0.00 0.00 35.89 3.41
1642 1678 1.418637 TCTTAACAAAGCCTGTCCGGT 59.581 47.619 0.00 0.00 37.23 5.28
1898 1934 3.050166 GATCGGCCGCAATGTGCAA 62.050 57.895 23.51 0.00 45.36 4.08
1899 1935 2.340453 GATCGGCCGCAATGTGCAAT 62.340 55.000 23.51 4.81 45.36 3.56
1900 1936 2.340453 ATCGGCCGCAATGTGCAATC 62.340 55.000 23.51 0.00 45.36 2.67
1901 1937 2.202783 GGCCGCAATGTGCAATCC 60.203 61.111 0.61 0.00 45.36 3.01
1902 1938 2.580326 GCCGCAATGTGCAATCCG 60.580 61.111 0.61 0.00 45.36 4.18
1903 1939 3.050166 GCCGCAATGTGCAATCCGA 62.050 57.895 0.61 0.00 45.36 4.55
1904 1940 1.063006 CCGCAATGTGCAATCCGAG 59.937 57.895 0.61 0.00 45.36 4.63
1905 1941 1.647545 CCGCAATGTGCAATCCGAGT 61.648 55.000 0.61 0.00 45.36 4.18
1906 1942 1.006086 CGCAATGTGCAATCCGAGTA 58.994 50.000 0.61 0.00 45.36 2.59
1907 1943 1.599071 CGCAATGTGCAATCCGAGTAT 59.401 47.619 0.61 0.00 45.36 2.12
1908 1944 2.032054 CGCAATGTGCAATCCGAGTATT 59.968 45.455 0.61 0.00 45.36 1.89
1909 1945 3.365832 GCAATGTGCAATCCGAGTATTG 58.634 45.455 0.00 0.00 44.26 1.90
1910 1946 3.065233 GCAATGTGCAATCCGAGTATTGA 59.935 43.478 8.66 0.00 44.26 2.57
1911 1947 4.438608 GCAATGTGCAATCCGAGTATTGAA 60.439 41.667 8.66 0.00 44.26 2.69
1912 1948 5.734220 GCAATGTGCAATCCGAGTATTGAAT 60.734 40.000 8.66 0.00 44.26 2.57
1913 1949 6.513230 GCAATGTGCAATCCGAGTATTGAATA 60.513 38.462 8.66 0.00 44.26 1.75
1914 1950 7.587629 CAATGTGCAATCCGAGTATTGAATAT 58.412 34.615 8.66 1.12 38.84 1.28
1915 1951 8.720562 CAATGTGCAATCCGAGTATTGAATATA 58.279 33.333 8.66 0.00 38.84 0.86
1916 1952 7.652300 TGTGCAATCCGAGTATTGAATATAC 57.348 36.000 8.66 0.00 38.84 1.47
1917 1953 7.441836 TGTGCAATCCGAGTATTGAATATACT 58.558 34.615 8.66 0.00 38.84 2.12
1918 1954 7.598869 TGTGCAATCCGAGTATTGAATATACTC 59.401 37.037 12.68 12.68 44.19 2.59
1919 1955 7.063544 GTGCAATCCGAGTATTGAATATACTCC 59.936 40.741 15.56 5.16 44.58 3.85
1920 1956 7.097192 GCAATCCGAGTATTGAATATACTCCA 58.903 38.462 15.56 6.55 44.58 3.86
1921 1957 7.276658 GCAATCCGAGTATTGAATATACTCCAG 59.723 40.741 15.56 9.78 44.58 3.86
1922 1958 6.835819 TCCGAGTATTGAATATACTCCAGG 57.164 41.667 15.56 12.76 44.58 4.45
1923 1959 5.185249 TCCGAGTATTGAATATACTCCAGGC 59.815 44.000 15.56 0.00 44.58 4.85
1924 1960 5.047306 CCGAGTATTGAATATACTCCAGGCA 60.047 44.000 15.56 0.00 44.58 4.75
1925 1961 6.455647 CGAGTATTGAATATACTCCAGGCAA 58.544 40.000 15.56 0.00 44.58 4.52
1926 1962 6.587990 CGAGTATTGAATATACTCCAGGCAAG 59.412 42.308 15.56 1.41 44.58 4.01
1927 1963 6.773638 AGTATTGAATATACTCCAGGCAAGG 58.226 40.000 0.00 0.00 29.47 3.61
1928 1964 3.492102 TGAATATACTCCAGGCAAGGC 57.508 47.619 0.00 0.00 0.00 4.35
1929 1965 9.592416 AGTATTGAATATACTCCAGGCAAGGCC 62.592 44.444 0.00 0.00 38.48 5.19
1939 1975 4.557942 GCAAGGCCAATGTCGTTG 57.442 55.556 5.01 0.00 37.57 4.10
1940 1976 1.734117 GCAAGGCCAATGTCGTTGC 60.734 57.895 5.01 5.96 44.38 4.17
1941 1977 1.959085 CAAGGCCAATGTCGTTGCT 59.041 52.632 5.01 0.00 36.46 3.91
1942 1978 0.387622 CAAGGCCAATGTCGTTGCTG 60.388 55.000 5.01 0.00 36.46 4.41
1943 1979 0.537143 AAGGCCAATGTCGTTGCTGA 60.537 50.000 5.01 0.00 36.46 4.26
1944 1980 0.322816 AGGCCAATGTCGTTGCTGAT 60.323 50.000 5.01 0.00 36.46 2.90
1945 1981 0.179156 GGCCAATGTCGTTGCTGATG 60.179 55.000 0.00 0.00 36.46 3.07
1946 1982 0.799534 GCCAATGTCGTTGCTGATGC 60.800 55.000 0.00 0.00 36.46 3.91
1947 1983 0.806868 CCAATGTCGTTGCTGATGCT 59.193 50.000 0.00 0.00 40.48 3.79
1948 1984 1.200716 CCAATGTCGTTGCTGATGCTT 59.799 47.619 0.00 0.00 40.48 3.91
1949 1985 2.352030 CCAATGTCGTTGCTGATGCTTT 60.352 45.455 0.00 0.00 40.48 3.51
1950 1986 2.624316 ATGTCGTTGCTGATGCTTTG 57.376 45.000 0.00 0.00 40.48 2.77
1951 1987 1.592064 TGTCGTTGCTGATGCTTTGA 58.408 45.000 0.00 0.00 40.48 2.69
1952 1988 1.532437 TGTCGTTGCTGATGCTTTGAG 59.468 47.619 0.00 0.00 40.48 3.02
1953 1989 0.518636 TCGTTGCTGATGCTTTGAGC 59.481 50.000 0.00 0.00 42.82 4.26
1954 1990 0.791983 CGTTGCTGATGCTTTGAGCG 60.792 55.000 0.00 0.00 46.26 5.03
1955 1991 0.455633 GTTGCTGATGCTTTGAGCGG 60.456 55.000 0.00 0.00 46.26 5.52
1956 1992 1.588824 TTGCTGATGCTTTGAGCGGG 61.589 55.000 0.00 0.00 46.26 6.13
1957 1993 1.746615 GCTGATGCTTTGAGCGGGA 60.747 57.895 0.00 0.00 46.26 5.14
1958 1994 1.308069 GCTGATGCTTTGAGCGGGAA 61.308 55.000 0.00 0.00 46.26 3.97
1959 1995 0.731417 CTGATGCTTTGAGCGGGAAG 59.269 55.000 0.00 0.00 46.26 3.46
1960 1996 0.677731 TGATGCTTTGAGCGGGAAGG 60.678 55.000 0.00 0.00 46.26 3.46
1961 1997 1.997928 GATGCTTTGAGCGGGAAGGC 61.998 60.000 0.00 0.00 46.26 4.35
1962 1998 2.490270 ATGCTTTGAGCGGGAAGGCT 62.490 55.000 0.00 0.00 46.26 4.58
1963 1999 1.973812 GCTTTGAGCGGGAAGGCTT 60.974 57.895 0.00 0.00 44.93 4.35
1964 2000 0.676782 GCTTTGAGCGGGAAGGCTTA 60.677 55.000 0.00 0.00 44.93 3.09
1965 2001 1.087501 CTTTGAGCGGGAAGGCTTAC 58.912 55.000 0.00 0.00 44.93 2.34
1966 2002 0.690762 TTTGAGCGGGAAGGCTTACT 59.309 50.000 9.79 0.19 44.93 2.24
1967 2003 1.563924 TTGAGCGGGAAGGCTTACTA 58.436 50.000 9.79 0.00 44.93 1.82
1968 2004 0.822164 TGAGCGGGAAGGCTTACTAC 59.178 55.000 9.79 1.68 44.93 2.73
1969 2005 0.822164 GAGCGGGAAGGCTTACTACA 59.178 55.000 9.79 0.00 44.93 2.74
1970 2006 1.206371 GAGCGGGAAGGCTTACTACAA 59.794 52.381 9.79 0.00 44.93 2.41
1971 2007 1.066358 AGCGGGAAGGCTTACTACAAC 60.066 52.381 9.79 0.00 41.39 3.32
1972 2008 1.338389 GCGGGAAGGCTTACTACAACA 60.338 52.381 9.79 0.00 0.00 3.33
1973 2009 2.618053 CGGGAAGGCTTACTACAACAG 58.382 52.381 9.79 0.00 0.00 3.16
1974 2010 2.357075 GGGAAGGCTTACTACAACAGC 58.643 52.381 9.79 0.00 0.00 4.40
1975 2011 2.027100 GGGAAGGCTTACTACAACAGCT 60.027 50.000 9.79 0.00 33.76 4.24
1976 2012 3.559384 GGGAAGGCTTACTACAACAGCTT 60.559 47.826 9.79 0.00 33.76 3.74
1977 2013 4.323257 GGGAAGGCTTACTACAACAGCTTA 60.323 45.833 9.79 0.00 33.76 3.09
1978 2014 5.243207 GGAAGGCTTACTACAACAGCTTAA 58.757 41.667 1.05 0.00 33.76 1.85
1979 2015 5.880887 GGAAGGCTTACTACAACAGCTTAAT 59.119 40.000 1.05 0.00 33.76 1.40
1980 2016 6.374613 GGAAGGCTTACTACAACAGCTTAATT 59.625 38.462 1.05 0.00 33.76 1.40
1981 2017 6.986904 AGGCTTACTACAACAGCTTAATTC 57.013 37.500 0.00 0.00 33.76 2.17
1982 2018 6.712276 AGGCTTACTACAACAGCTTAATTCT 58.288 36.000 0.00 0.00 33.76 2.40
1983 2019 6.819146 AGGCTTACTACAACAGCTTAATTCTC 59.181 38.462 0.00 0.00 33.76 2.87
1984 2020 6.594159 GGCTTACTACAACAGCTTAATTCTCA 59.406 38.462 0.00 0.00 33.76 3.27
1985 2021 7.201565 GGCTTACTACAACAGCTTAATTCTCAG 60.202 40.741 0.00 0.00 33.76 3.35
1986 2022 7.201565 GCTTACTACAACAGCTTAATTCTCAGG 60.202 40.741 0.00 0.00 0.00 3.86
1987 2023 6.115448 ACTACAACAGCTTAATTCTCAGGT 57.885 37.500 0.00 0.00 0.00 4.00
1988 2024 6.166982 ACTACAACAGCTTAATTCTCAGGTC 58.833 40.000 0.00 0.00 0.00 3.85
1989 2025 4.327680 ACAACAGCTTAATTCTCAGGTCC 58.672 43.478 0.00 0.00 0.00 4.46
1990 2026 4.042187 ACAACAGCTTAATTCTCAGGTCCT 59.958 41.667 0.00 0.00 0.00 3.85
1991 2027 4.917906 ACAGCTTAATTCTCAGGTCCTT 57.082 40.909 0.00 0.00 0.00 3.36
1992 2028 4.837972 ACAGCTTAATTCTCAGGTCCTTC 58.162 43.478 0.00 0.00 0.00 3.46
1993 2029 4.195416 CAGCTTAATTCTCAGGTCCTTCC 58.805 47.826 0.00 0.00 0.00 3.46
1994 2030 3.846588 AGCTTAATTCTCAGGTCCTTCCA 59.153 43.478 0.00 0.00 39.02 3.53
1995 2031 4.289672 AGCTTAATTCTCAGGTCCTTCCAA 59.710 41.667 0.00 0.00 39.02 3.53
1996 2032 4.396478 GCTTAATTCTCAGGTCCTTCCAAC 59.604 45.833 0.00 0.00 39.02 3.77
1997 2033 3.441500 AATTCTCAGGTCCTTCCAACC 57.558 47.619 0.00 0.00 39.02 3.77
1998 2034 0.685097 TTCTCAGGTCCTTCCAACCG 59.315 55.000 0.00 0.00 41.89 4.44
1999 2035 1.192146 TCTCAGGTCCTTCCAACCGG 61.192 60.000 0.00 0.00 41.89 5.28
2000 2036 1.152204 TCAGGTCCTTCCAACCGGA 60.152 57.895 9.46 0.00 41.89 5.14
2003 2039 3.479979 GTCCTTCCAACCGGACCT 58.520 61.111 9.46 0.00 42.67 3.85
2004 2040 1.759236 GTCCTTCCAACCGGACCTT 59.241 57.895 9.46 0.00 42.67 3.50
2005 2041 0.109913 GTCCTTCCAACCGGACCTTT 59.890 55.000 9.46 0.00 42.67 3.11
2006 2042 0.109723 TCCTTCCAACCGGACCTTTG 59.890 55.000 9.46 1.03 42.67 2.77
2007 2043 0.179001 CCTTCCAACCGGACCTTTGT 60.179 55.000 9.46 0.00 42.67 2.83
2008 2044 0.951558 CTTCCAACCGGACCTTTGTG 59.048 55.000 9.46 0.00 42.67 3.33
2009 2045 0.547075 TTCCAACCGGACCTTTGTGA 59.453 50.000 9.46 0.00 42.67 3.58
2010 2046 0.547075 TCCAACCGGACCTTTGTGAA 59.453 50.000 9.46 0.00 35.91 3.18
2011 2047 0.951558 CCAACCGGACCTTTGTGAAG 59.048 55.000 9.46 0.00 0.00 3.02
2012 2048 0.310854 CAACCGGACCTTTGTGAAGC 59.689 55.000 9.46 0.00 0.00 3.86
2013 2049 0.182775 AACCGGACCTTTGTGAAGCT 59.817 50.000 9.46 0.00 0.00 3.74
2014 2050 0.182775 ACCGGACCTTTGTGAAGCTT 59.817 50.000 9.46 0.00 0.00 3.74
2015 2051 1.318576 CCGGACCTTTGTGAAGCTTT 58.681 50.000 0.00 0.00 0.00 3.51
2016 2052 1.266989 CCGGACCTTTGTGAAGCTTTC 59.733 52.381 0.00 0.00 0.00 2.62
2017 2053 1.266989 CGGACCTTTGTGAAGCTTTCC 59.733 52.381 0.00 0.00 0.00 3.13
2018 2054 1.266989 GGACCTTTGTGAAGCTTTCCG 59.733 52.381 0.00 0.00 0.00 4.30
2019 2055 0.668535 ACCTTTGTGAAGCTTTCCGC 59.331 50.000 0.00 0.00 39.57 5.54
2020 2056 0.667993 CCTTTGTGAAGCTTTCCGCA 59.332 50.000 0.00 0.00 42.61 5.69
2021 2057 1.066908 CCTTTGTGAAGCTTTCCGCAA 59.933 47.619 9.40 9.40 42.61 4.85
2022 2058 2.481104 CCTTTGTGAAGCTTTCCGCAAA 60.481 45.455 19.71 19.71 42.61 3.68
2023 2059 2.202295 TTGTGAAGCTTTCCGCAAAC 57.798 45.000 10.69 0.00 42.61 2.93
2024 2060 1.388547 TGTGAAGCTTTCCGCAAACT 58.611 45.000 0.00 0.00 42.61 2.66
2025 2061 2.566913 TGTGAAGCTTTCCGCAAACTA 58.433 42.857 0.00 0.00 42.61 2.24
2026 2062 2.946329 TGTGAAGCTTTCCGCAAACTAA 59.054 40.909 0.00 0.00 42.61 2.24
2027 2063 3.378742 TGTGAAGCTTTCCGCAAACTAAA 59.621 39.130 0.00 0.00 42.61 1.85
2028 2064 4.037446 TGTGAAGCTTTCCGCAAACTAAAT 59.963 37.500 0.00 0.00 42.61 1.40
2029 2065 4.617223 GTGAAGCTTTCCGCAAACTAAATC 59.383 41.667 0.00 0.00 42.61 2.17
2030 2066 4.518970 TGAAGCTTTCCGCAAACTAAATCT 59.481 37.500 0.00 0.00 42.61 2.40
2031 2067 4.686839 AGCTTTCCGCAAACTAAATCTC 57.313 40.909 0.00 0.00 42.61 2.75
2032 2068 3.440522 AGCTTTCCGCAAACTAAATCTCC 59.559 43.478 0.00 0.00 42.61 3.71
2033 2069 3.190535 GCTTTCCGCAAACTAAATCTCCA 59.809 43.478 0.00 0.00 38.92 3.86
2034 2070 4.320935 GCTTTCCGCAAACTAAATCTCCAA 60.321 41.667 0.00 0.00 38.92 3.53
2035 2071 5.371115 TTTCCGCAAACTAAATCTCCAAG 57.629 39.130 0.00 0.00 0.00 3.61
2036 2072 4.015872 TCCGCAAACTAAATCTCCAAGT 57.984 40.909 0.00 0.00 0.00 3.16
2037 2073 4.394729 TCCGCAAACTAAATCTCCAAGTT 58.605 39.130 0.00 0.00 35.01 2.66
2038 2074 4.215399 TCCGCAAACTAAATCTCCAAGTTG 59.785 41.667 0.00 0.00 33.85 3.16
2039 2075 4.023193 CCGCAAACTAAATCTCCAAGTTGT 60.023 41.667 1.45 0.00 33.85 3.32
2040 2076 5.507315 CCGCAAACTAAATCTCCAAGTTGTT 60.507 40.000 1.45 0.00 33.85 2.83
2041 2077 5.625311 CGCAAACTAAATCTCCAAGTTGTTC 59.375 40.000 1.45 0.00 33.85 3.18
2042 2078 5.920840 GCAAACTAAATCTCCAAGTTGTTCC 59.079 40.000 1.45 0.00 33.85 3.62
2043 2079 6.239036 GCAAACTAAATCTCCAAGTTGTTCCT 60.239 38.462 1.45 0.00 33.85 3.36
2044 2080 7.363431 CAAACTAAATCTCCAAGTTGTTCCTC 58.637 38.462 1.45 0.00 33.85 3.71
2045 2081 6.187727 ACTAAATCTCCAAGTTGTTCCTCA 57.812 37.500 1.45 0.00 0.00 3.86
2046 2082 6.601332 ACTAAATCTCCAAGTTGTTCCTCAA 58.399 36.000 1.45 0.00 0.00 3.02
2047 2083 6.712547 ACTAAATCTCCAAGTTGTTCCTCAAG 59.287 38.462 1.45 0.00 36.66 3.02
2048 2084 3.492102 TCTCCAAGTTGTTCCTCAAGG 57.508 47.619 1.45 0.00 36.66 3.61
2049 2085 1.882623 CTCCAAGTTGTTCCTCAAGGC 59.117 52.381 1.45 0.00 36.66 4.35
2050 2086 1.494721 TCCAAGTTGTTCCTCAAGGCT 59.505 47.619 1.45 0.00 36.66 4.58
2051 2087 2.091885 TCCAAGTTGTTCCTCAAGGCTT 60.092 45.455 1.45 0.00 36.66 4.35
2052 2088 2.695147 CCAAGTTGTTCCTCAAGGCTTT 59.305 45.455 0.00 0.00 36.66 3.51
2053 2089 3.243535 CCAAGTTGTTCCTCAAGGCTTTC 60.244 47.826 0.00 0.00 36.66 2.62
2054 2090 3.584733 AGTTGTTCCTCAAGGCTTTCT 57.415 42.857 0.00 0.00 36.66 2.52
2055 2091 3.217626 AGTTGTTCCTCAAGGCTTTCTG 58.782 45.455 0.00 0.00 36.66 3.02
2056 2092 2.276732 TGTTCCTCAAGGCTTTCTGG 57.723 50.000 0.00 0.00 34.44 3.86
2057 2093 0.884514 GTTCCTCAAGGCTTTCTGGC 59.115 55.000 0.00 0.00 42.15 4.85
2068 2104 3.722728 GCTTTCTGGCCAATATCCAAG 57.277 47.619 7.01 3.99 32.41 3.61
2069 2105 3.026694 GCTTTCTGGCCAATATCCAAGT 58.973 45.455 7.01 0.00 32.41 3.16
2070 2106 3.067320 GCTTTCTGGCCAATATCCAAGTC 59.933 47.826 7.01 0.00 32.41 3.01
2071 2107 4.530875 CTTTCTGGCCAATATCCAAGTCT 58.469 43.478 7.01 0.00 32.41 3.24
2072 2108 3.845781 TCTGGCCAATATCCAAGTCTC 57.154 47.619 7.01 0.00 32.41 3.36
2073 2109 3.387962 TCTGGCCAATATCCAAGTCTCT 58.612 45.455 7.01 0.00 32.41 3.10
2074 2110 3.389329 TCTGGCCAATATCCAAGTCTCTC 59.611 47.826 7.01 0.00 32.41 3.20
2075 2111 2.439507 TGGCCAATATCCAAGTCTCTCC 59.560 50.000 0.61 0.00 0.00 3.71
2076 2112 2.708325 GGCCAATATCCAAGTCTCTCCT 59.292 50.000 0.00 0.00 0.00 3.69
2077 2113 3.904339 GGCCAATATCCAAGTCTCTCCTA 59.096 47.826 0.00 0.00 0.00 2.94
2078 2114 4.262678 GGCCAATATCCAAGTCTCTCCTAC 60.263 50.000 0.00 0.00 0.00 3.18
2079 2115 4.591072 GCCAATATCCAAGTCTCTCCTACT 59.409 45.833 0.00 0.00 0.00 2.57
2080 2116 5.071115 GCCAATATCCAAGTCTCTCCTACTT 59.929 44.000 0.00 0.00 37.67 2.24
2081 2117 6.408662 GCCAATATCCAAGTCTCTCCTACTTT 60.409 42.308 0.00 0.00 34.99 2.66
2082 2118 6.989169 CCAATATCCAAGTCTCTCCTACTTTG 59.011 42.308 0.00 0.00 34.99 2.77
2083 2119 6.739331 ATATCCAAGTCTCTCCTACTTTGG 57.261 41.667 0.00 0.00 34.99 3.28
2084 2120 4.127918 TCCAAGTCTCTCCTACTTTGGA 57.872 45.455 0.00 0.00 34.99 3.53
2085 2121 4.489737 TCCAAGTCTCTCCTACTTTGGAA 58.510 43.478 1.54 0.00 34.99 3.53
2086 2122 4.528596 TCCAAGTCTCTCCTACTTTGGAAG 59.471 45.833 1.54 0.00 34.99 3.46
2087 2123 4.528596 CCAAGTCTCTCCTACTTTGGAAGA 59.471 45.833 0.00 0.00 34.99 2.87
2088 2124 5.188751 CCAAGTCTCTCCTACTTTGGAAGAT 59.811 44.000 0.00 0.00 34.99 2.40
2089 2125 6.337356 CAAGTCTCTCCTACTTTGGAAGATC 58.663 44.000 0.00 0.00 34.99 2.75
2090 2126 5.584913 AGTCTCTCCTACTTTGGAAGATCA 58.415 41.667 0.00 0.00 35.43 2.92
2091 2127 6.019748 AGTCTCTCCTACTTTGGAAGATCAA 58.980 40.000 0.00 0.00 35.43 2.57
2092 2128 6.498651 AGTCTCTCCTACTTTGGAAGATCAAA 59.501 38.462 0.00 0.00 35.43 2.69
2093 2129 7.181845 AGTCTCTCCTACTTTGGAAGATCAAAT 59.818 37.037 0.00 0.00 36.24 2.32
2094 2130 7.826744 GTCTCTCCTACTTTGGAAGATCAAATT 59.173 37.037 0.00 0.00 36.24 1.82
2095 2131 8.043710 TCTCTCCTACTTTGGAAGATCAAATTC 58.956 37.037 0.00 0.00 36.24 2.17
2096 2132 7.689299 TCTCCTACTTTGGAAGATCAAATTCA 58.311 34.615 0.00 0.00 36.24 2.57
2097 2133 8.331740 TCTCCTACTTTGGAAGATCAAATTCAT 58.668 33.333 0.00 0.00 36.24 2.57
2098 2134 8.284945 TCCTACTTTGGAAGATCAAATTCATG 57.715 34.615 0.00 0.00 36.24 3.07
2099 2135 8.108999 TCCTACTTTGGAAGATCAAATTCATGA 58.891 33.333 0.00 0.00 36.24 3.07
2100 2136 8.404000 CCTACTTTGGAAGATCAAATTCATGAG 58.596 37.037 0.00 0.00 36.24 2.90
2101 2137 7.166691 ACTTTGGAAGATCAAATTCATGAGG 57.833 36.000 0.00 0.00 36.24 3.86
2102 2138 5.587388 TTGGAAGATCAAATTCATGAGGC 57.413 39.130 0.00 0.00 31.76 4.70
2103 2139 4.602107 TGGAAGATCAAATTCATGAGGCA 58.398 39.130 0.00 0.00 31.76 4.75
2104 2140 4.400251 TGGAAGATCAAATTCATGAGGCAC 59.600 41.667 0.00 0.00 31.76 5.01
2105 2141 4.400251 GGAAGATCAAATTCATGAGGCACA 59.600 41.667 0.00 0.00 31.76 4.57
2106 2142 5.105635 GGAAGATCAAATTCATGAGGCACAA 60.106 40.000 0.00 0.00 31.76 3.33
2107 2143 5.320549 AGATCAAATTCATGAGGCACAAC 57.679 39.130 0.00 0.00 31.76 3.32
2108 2144 5.014858 AGATCAAATTCATGAGGCACAACT 58.985 37.500 0.00 0.00 31.76 3.16
2109 2145 5.479375 AGATCAAATTCATGAGGCACAACTT 59.521 36.000 0.00 0.00 31.76 2.66
2110 2146 5.125100 TCAAATTCATGAGGCACAACTTC 57.875 39.130 0.00 0.00 0.00 3.01
2111 2147 4.828939 TCAAATTCATGAGGCACAACTTCT 59.171 37.500 0.00 0.00 0.00 2.85
2112 2148 5.302568 TCAAATTCATGAGGCACAACTTCTT 59.697 36.000 0.00 0.00 0.00 2.52
2113 2149 4.778534 ATTCATGAGGCACAACTTCTTG 57.221 40.909 0.00 0.00 0.00 3.02
2114 2150 3.490439 TCATGAGGCACAACTTCTTGA 57.510 42.857 0.00 0.00 0.00 3.02
2115 2151 4.025040 TCATGAGGCACAACTTCTTGAT 57.975 40.909 0.00 0.00 0.00 2.57
2116 2152 4.401022 TCATGAGGCACAACTTCTTGATT 58.599 39.130 0.00 0.00 0.00 2.57
2117 2153 4.456911 TCATGAGGCACAACTTCTTGATTC 59.543 41.667 0.00 0.00 0.00 2.52
2118 2154 3.149196 TGAGGCACAACTTCTTGATTCC 58.851 45.455 0.00 0.00 0.00 3.01
2119 2155 3.149196 GAGGCACAACTTCTTGATTCCA 58.851 45.455 0.00 0.00 0.00 3.53
2120 2156 3.760684 GAGGCACAACTTCTTGATTCCAT 59.239 43.478 0.00 0.00 0.00 3.41
2121 2157 3.508793 AGGCACAACTTCTTGATTCCATG 59.491 43.478 0.00 0.00 0.00 3.66
2122 2158 3.367703 GGCACAACTTCTTGATTCCATGG 60.368 47.826 4.97 4.97 0.00 3.66
2123 2159 3.256631 GCACAACTTCTTGATTCCATGGT 59.743 43.478 12.58 0.00 0.00 3.55
2124 2160 4.801891 CACAACTTCTTGATTCCATGGTG 58.198 43.478 12.58 0.00 0.00 4.17
2125 2161 4.279169 CACAACTTCTTGATTCCATGGTGT 59.721 41.667 12.58 0.92 0.00 4.16
2126 2162 4.520492 ACAACTTCTTGATTCCATGGTGTC 59.480 41.667 12.58 11.53 0.00 3.67
2127 2163 3.338249 ACTTCTTGATTCCATGGTGTCG 58.662 45.455 12.58 0.34 0.00 4.35
2128 2164 2.401583 TCTTGATTCCATGGTGTCGG 57.598 50.000 12.58 8.23 0.00 4.79
2129 2165 1.065491 TCTTGATTCCATGGTGTCGGG 60.065 52.381 12.58 7.92 0.00 5.14
2130 2166 0.034574 TTGATTCCATGGTGTCGGGG 60.035 55.000 12.58 0.00 0.00 5.73
2131 2167 1.204786 TGATTCCATGGTGTCGGGGT 61.205 55.000 12.58 0.00 0.00 4.95
2132 2168 0.034477 GATTCCATGGTGTCGGGGTT 60.034 55.000 12.58 0.00 0.00 4.11
2133 2169 0.407918 ATTCCATGGTGTCGGGGTTT 59.592 50.000 12.58 0.00 0.00 3.27
2134 2170 0.538516 TTCCATGGTGTCGGGGTTTG 60.539 55.000 12.58 0.00 0.00 2.93
2135 2171 1.976474 CCATGGTGTCGGGGTTTGG 60.976 63.158 2.57 0.00 0.00 3.28
2136 2172 1.976474 CATGGTGTCGGGGTTTGGG 60.976 63.158 0.00 0.00 0.00 4.12
2137 2173 2.466186 ATGGTGTCGGGGTTTGGGT 61.466 57.895 0.00 0.00 0.00 4.51
2138 2174 2.596338 GGTGTCGGGGTTTGGGTG 60.596 66.667 0.00 0.00 0.00 4.61
2139 2175 3.292159 GTGTCGGGGTTTGGGTGC 61.292 66.667 0.00 0.00 0.00 5.01
2140 2176 4.939368 TGTCGGGGTTTGGGTGCG 62.939 66.667 0.00 0.00 0.00 5.34
2141 2177 4.629523 GTCGGGGTTTGGGTGCGA 62.630 66.667 0.00 0.00 0.00 5.10
2142 2178 4.629523 TCGGGGTTTGGGTGCGAC 62.630 66.667 0.00 0.00 0.00 5.19
2143 2179 4.939368 CGGGGTTTGGGTGCGACA 62.939 66.667 0.00 0.00 0.00 4.35
2144 2180 2.282887 GGGGTTTGGGTGCGACAT 60.283 61.111 0.00 0.00 0.00 3.06
2145 2181 1.001887 GGGGTTTGGGTGCGACATA 60.002 57.895 0.00 0.00 0.00 2.29
2146 2182 0.395173 GGGGTTTGGGTGCGACATAT 60.395 55.000 0.00 0.00 0.00 1.78
2147 2183 0.738389 GGGTTTGGGTGCGACATATG 59.262 55.000 0.00 0.00 0.00 1.78
2148 2184 0.100503 GGTTTGGGTGCGACATATGC 59.899 55.000 1.58 0.00 0.00 3.14
2149 2185 0.100503 GTTTGGGTGCGACATATGCC 59.899 55.000 1.58 0.00 0.00 4.40
2150 2186 0.322906 TTTGGGTGCGACATATGCCA 60.323 50.000 1.58 0.00 0.00 4.92
2151 2187 0.322906 TTGGGTGCGACATATGCCAA 60.323 50.000 1.58 4.43 0.00 4.52
2152 2188 0.322906 TGGGTGCGACATATGCCAAA 60.323 50.000 1.58 0.00 0.00 3.28
2153 2189 0.381801 GGGTGCGACATATGCCAAAG 59.618 55.000 1.58 0.00 0.00 2.77
2154 2190 0.381801 GGTGCGACATATGCCAAAGG 59.618 55.000 1.58 0.00 0.00 3.11
2155 2191 1.378531 GTGCGACATATGCCAAAGGA 58.621 50.000 1.58 0.00 0.00 3.36
2156 2192 1.949525 GTGCGACATATGCCAAAGGAT 59.050 47.619 1.58 0.00 0.00 3.24
2157 2193 1.948834 TGCGACATATGCCAAAGGATG 59.051 47.619 1.58 0.00 0.00 3.51
2169 2205 3.569491 CCAAAGGATGGCTTATCATGGT 58.431 45.455 0.00 0.00 43.80 3.55
2170 2206 3.319972 CCAAAGGATGGCTTATCATGGTG 59.680 47.826 0.00 0.76 43.80 4.17
2171 2207 2.965671 AGGATGGCTTATCATGGTGG 57.034 50.000 0.00 0.00 37.54 4.61
2172 2208 1.426598 AGGATGGCTTATCATGGTGGG 59.573 52.381 0.00 0.00 37.54 4.61
2173 2209 1.548582 GGATGGCTTATCATGGTGGGG 60.549 57.143 0.00 0.00 37.54 4.96
2174 2210 0.484212 ATGGCTTATCATGGTGGGGG 59.516 55.000 0.00 0.00 0.00 5.40
2175 2211 1.531602 GGCTTATCATGGTGGGGGC 60.532 63.158 0.00 0.00 0.00 5.80
2176 2212 1.898574 GCTTATCATGGTGGGGGCG 60.899 63.158 0.00 0.00 0.00 6.13
2177 2213 1.836391 CTTATCATGGTGGGGGCGA 59.164 57.895 0.00 0.00 0.00 5.54
2178 2214 0.250467 CTTATCATGGTGGGGGCGAG 60.250 60.000 0.00 0.00 0.00 5.03
2179 2215 0.986019 TTATCATGGTGGGGGCGAGT 60.986 55.000 0.00 0.00 0.00 4.18
2180 2216 0.105401 TATCATGGTGGGGGCGAGTA 60.105 55.000 0.00 0.00 0.00 2.59
2181 2217 1.410850 ATCATGGTGGGGGCGAGTAG 61.411 60.000 0.00 0.00 0.00 2.57
2182 2218 2.063979 CATGGTGGGGGCGAGTAGA 61.064 63.158 0.00 0.00 0.00 2.59
2183 2219 1.306654 ATGGTGGGGGCGAGTAGAA 60.307 57.895 0.00 0.00 0.00 2.10
2184 2220 1.623542 ATGGTGGGGGCGAGTAGAAC 61.624 60.000 0.00 0.00 0.00 3.01
2185 2221 2.183555 GTGGGGGCGAGTAGAACG 59.816 66.667 0.00 0.00 0.00 3.95
2186 2222 2.283388 TGGGGGCGAGTAGAACGT 60.283 61.111 0.00 0.00 0.00 3.99
2187 2223 2.345760 TGGGGGCGAGTAGAACGTC 61.346 63.158 0.00 0.00 34.52 4.34
2188 2224 2.101770 GGGGCGAGTAGAACGTCG 59.898 66.667 0.00 0.00 39.25 5.12
2192 2228 2.277120 CGAGTAGAACGTCGCCGG 60.277 66.667 0.00 0.00 38.78 6.13
2193 2229 2.873288 GAGTAGAACGTCGCCGGT 59.127 61.111 1.90 0.00 38.78 5.28
2194 2230 1.513586 GAGTAGAACGTCGCCGGTG 60.514 63.158 9.28 9.28 38.78 4.94
2195 2231 3.177249 GTAGAACGTCGCCGGTGC 61.177 66.667 11.05 4.65 38.78 5.01
2196 2232 4.424566 TAGAACGTCGCCGGTGCC 62.425 66.667 11.05 0.00 38.78 5.01
2213 2249 4.225497 CTGGAAACGGGATGAGGC 57.775 61.111 0.00 0.00 0.00 4.70
2214 2250 1.815421 CTGGAAACGGGATGAGGCG 60.815 63.158 0.00 0.00 0.00 5.52
2215 2251 2.238847 CTGGAAACGGGATGAGGCGA 62.239 60.000 0.00 0.00 0.00 5.54
2216 2252 1.078708 GGAAACGGGATGAGGCGAA 60.079 57.895 0.00 0.00 0.00 4.70
2217 2253 1.090052 GGAAACGGGATGAGGCGAAG 61.090 60.000 0.00 0.00 0.00 3.79
2218 2254 0.108329 GAAACGGGATGAGGCGAAGA 60.108 55.000 0.00 0.00 0.00 2.87
2219 2255 0.391263 AAACGGGATGAGGCGAAGAC 60.391 55.000 0.00 0.00 0.00 3.01
2220 2256 1.541310 AACGGGATGAGGCGAAGACA 61.541 55.000 0.00 0.00 39.87 3.41
2221 2257 1.330655 ACGGGATGAGGCGAAGACAT 61.331 55.000 0.00 0.00 39.87 3.06
2222 2258 0.877649 CGGGATGAGGCGAAGACATG 60.878 60.000 0.00 0.00 39.87 3.21
2223 2259 1.162800 GGGATGAGGCGAAGACATGC 61.163 60.000 0.00 0.00 39.87 4.06
2224 2260 0.462581 GGATGAGGCGAAGACATGCA 60.463 55.000 0.00 0.00 39.87 3.96
2225 2261 0.654683 GATGAGGCGAAGACATGCAC 59.345 55.000 0.00 0.00 39.87 4.57
2226 2262 1.086067 ATGAGGCGAAGACATGCACG 61.086 55.000 0.00 0.00 39.87 5.34
2227 2263 3.088500 GAGGCGAAGACATGCACGC 62.089 63.158 8.46 8.46 39.87 5.34
2229 2265 4.505217 GCGAAGACATGCACGCCG 62.505 66.667 5.89 8.38 44.27 6.46
2230 2266 3.853330 CGAAGACATGCACGCCGG 61.853 66.667 0.00 0.00 0.00 6.13
2231 2267 2.742372 GAAGACATGCACGCCGGT 60.742 61.111 1.90 0.00 0.00 5.28
2241 2277 4.926207 ACGCCGGTGAATCTTACC 57.074 55.556 24.59 0.00 34.81 2.85
2242 2278 1.219935 ACGCCGGTGAATCTTACCC 59.780 57.895 24.59 0.00 34.66 3.69
2243 2279 1.219664 CGCCGGTGAATCTTACCCA 59.780 57.895 10.20 0.00 34.66 4.51
2244 2280 0.810031 CGCCGGTGAATCTTACCCAG 60.810 60.000 10.20 0.00 34.66 4.45
2245 2281 1.095807 GCCGGTGAATCTTACCCAGC 61.096 60.000 1.90 0.00 34.66 4.85
2246 2282 0.541863 CCGGTGAATCTTACCCAGCT 59.458 55.000 0.00 0.00 34.66 4.24
2247 2283 1.065418 CCGGTGAATCTTACCCAGCTT 60.065 52.381 0.00 0.00 34.66 3.74
2248 2284 2.280628 CGGTGAATCTTACCCAGCTTC 58.719 52.381 0.00 0.00 34.66 3.86
2249 2285 2.354704 CGGTGAATCTTACCCAGCTTCA 60.355 50.000 0.00 0.00 35.65 3.02
2250 2286 3.274288 GGTGAATCTTACCCAGCTTCAG 58.726 50.000 0.00 0.00 38.13 3.02
2251 2287 3.274288 GTGAATCTTACCCAGCTTCAGG 58.726 50.000 0.00 0.00 38.13 3.86
2257 2293 2.588989 CCCAGCTTCAGGGCTCTC 59.411 66.667 0.00 0.00 41.00 3.20
2258 2294 2.588989 CCAGCTTCAGGGCTCTCC 59.411 66.667 0.00 0.00 41.00 3.71
2259 2295 2.186384 CAGCTTCAGGGCTCTCCG 59.814 66.667 0.00 0.00 41.00 4.63
2260 2296 3.080121 AGCTTCAGGGCTCTCCGG 61.080 66.667 0.00 0.00 38.24 5.14
2261 2297 4.168291 GCTTCAGGGCTCTCCGGG 62.168 72.222 0.00 0.00 41.52 5.73
2262 2298 3.474570 CTTCAGGGCTCTCCGGGG 61.475 72.222 0.00 0.00 41.52 5.73
2263 2299 3.984186 CTTCAGGGCTCTCCGGGGA 62.984 68.421 2.68 2.68 41.52 4.81
2264 2300 3.984186 TTCAGGGCTCTCCGGGGAG 62.984 68.421 28.03 28.03 43.21 4.30
2273 2309 2.617840 TCTCCGGGGAGATAATACCC 57.382 55.000 13.35 0.00 45.26 3.69
2281 2317 3.792515 GGGAGATAATACCCCTGCTACT 58.207 50.000 0.00 0.00 40.19 2.57
2282 2318 3.515901 GGGAGATAATACCCCTGCTACTG 59.484 52.174 0.00 0.00 40.19 2.74
2283 2319 3.055747 GGAGATAATACCCCTGCTACTGC 60.056 52.174 0.00 0.00 40.20 4.40
2284 2320 3.835395 GAGATAATACCCCTGCTACTGCT 59.165 47.826 0.00 0.00 40.48 4.24
2285 2321 3.835395 AGATAATACCCCTGCTACTGCTC 59.165 47.826 0.00 0.00 40.48 4.26
2286 2322 2.182516 AATACCCCTGCTACTGCTCT 57.817 50.000 0.00 0.00 40.48 4.09
2287 2323 3.330126 AATACCCCTGCTACTGCTCTA 57.670 47.619 0.00 0.00 40.48 2.43
2288 2324 2.068834 TACCCCTGCTACTGCTCTAC 57.931 55.000 0.00 0.00 40.48 2.59
2289 2325 1.038130 ACCCCTGCTACTGCTCTACG 61.038 60.000 0.00 0.00 40.48 3.51
2290 2326 1.736586 CCCTGCTACTGCTCTACGG 59.263 63.158 0.00 0.00 40.48 4.02
2291 2327 1.736586 CCTGCTACTGCTCTACGGG 59.263 63.158 0.00 0.00 40.48 5.28
2292 2328 1.736586 CTGCTACTGCTCTACGGGG 59.263 63.158 0.00 0.00 40.48 5.73
2293 2329 1.000019 TGCTACTGCTCTACGGGGT 60.000 57.895 0.00 0.00 40.48 4.95
2294 2330 1.035932 TGCTACTGCTCTACGGGGTC 61.036 60.000 0.00 0.00 40.48 4.46
2295 2331 0.752376 GCTACTGCTCTACGGGGTCT 60.752 60.000 0.00 0.00 36.03 3.85
2296 2332 1.310904 CTACTGCTCTACGGGGTCTC 58.689 60.000 0.00 0.00 0.00 3.36
2297 2333 0.106819 TACTGCTCTACGGGGTCTCC 60.107 60.000 0.00 0.00 0.00 3.71
2298 2334 1.379977 CTGCTCTACGGGGTCTCCA 60.380 63.158 0.00 0.00 34.36 3.86
2299 2335 1.668101 CTGCTCTACGGGGTCTCCAC 61.668 65.000 0.00 0.00 34.36 4.02
2300 2336 1.681327 GCTCTACGGGGTCTCCACA 60.681 63.158 0.00 0.00 34.36 4.17
2301 2337 1.043673 GCTCTACGGGGTCTCCACAT 61.044 60.000 0.00 0.00 34.36 3.21
2302 2338 0.747255 CTCTACGGGGTCTCCACATG 59.253 60.000 0.00 0.00 34.36 3.21
2303 2339 0.333652 TCTACGGGGTCTCCACATGA 59.666 55.000 0.00 0.00 34.36 3.07
2304 2340 1.063190 TCTACGGGGTCTCCACATGAT 60.063 52.381 0.00 0.00 34.36 2.45
2305 2341 1.341531 CTACGGGGTCTCCACATGATC 59.658 57.143 0.00 0.00 34.36 2.92
2306 2342 0.617535 ACGGGGTCTCCACATGATCA 60.618 55.000 0.00 0.00 34.36 2.92
2307 2343 0.179073 CGGGGTCTCCACATGATCAC 60.179 60.000 0.00 0.00 34.36 3.06
2308 2344 1.207791 GGGGTCTCCACATGATCACT 58.792 55.000 0.00 0.00 35.00 3.41
2309 2345 2.398588 GGGGTCTCCACATGATCACTA 58.601 52.381 0.00 0.00 35.00 2.74
2310 2346 2.975489 GGGGTCTCCACATGATCACTAT 59.025 50.000 0.00 0.00 35.00 2.12
2311 2347 3.244353 GGGGTCTCCACATGATCACTATG 60.244 52.174 0.00 0.00 35.00 2.23
2312 2348 3.244353 GGGTCTCCACATGATCACTATGG 60.244 52.174 13.30 13.30 0.00 2.74
2313 2349 3.397482 GTCTCCACATGATCACTATGGC 58.603 50.000 14.29 1.19 0.00 4.40
2314 2350 3.040477 TCTCCACATGATCACTATGGCA 58.960 45.455 14.29 0.00 0.00 4.92
2315 2351 3.455543 TCTCCACATGATCACTATGGCAA 59.544 43.478 14.29 4.95 0.00 4.52
2316 2352 4.080413 TCTCCACATGATCACTATGGCAAA 60.080 41.667 14.29 3.04 0.00 3.68
2317 2353 4.201657 TCCACATGATCACTATGGCAAAG 58.798 43.478 14.29 0.00 0.00 2.77
2318 2354 3.949754 CCACATGATCACTATGGCAAAGT 59.050 43.478 0.00 0.00 0.00 2.66
2319 2355 4.201980 CCACATGATCACTATGGCAAAGTG 60.202 45.833 0.00 6.10 44.66 3.16
2320 2356 4.397103 CACATGATCACTATGGCAAAGTGT 59.603 41.667 0.00 0.00 43.88 3.55
2321 2357 5.012239 ACATGATCACTATGGCAAAGTGTT 58.988 37.500 0.00 4.51 43.88 3.32
2322 2358 5.477984 ACATGATCACTATGGCAAAGTGTTT 59.522 36.000 0.00 2.67 43.88 2.83
2323 2359 6.658816 ACATGATCACTATGGCAAAGTGTTTA 59.341 34.615 0.00 2.63 43.88 2.01
2324 2360 6.494893 TGATCACTATGGCAAAGTGTTTAC 57.505 37.500 10.85 4.28 43.88 2.01
2325 2361 6.000840 TGATCACTATGGCAAAGTGTTTACA 58.999 36.000 10.85 6.09 43.88 2.41
2326 2362 6.658816 TGATCACTATGGCAAAGTGTTTACAT 59.341 34.615 10.85 0.00 43.88 2.29
2327 2363 6.252967 TCACTATGGCAAAGTGTTTACATG 57.747 37.500 10.85 0.00 43.88 3.21
2328 2364 5.767665 TCACTATGGCAAAGTGTTTACATGT 59.232 36.000 2.69 2.69 43.88 3.21
2329 2365 6.937465 TCACTATGGCAAAGTGTTTACATGTA 59.063 34.615 0.08 0.08 43.88 2.29
2330 2366 7.119116 TCACTATGGCAAAGTGTTTACATGTAG 59.881 37.037 5.56 0.00 43.88 2.74
2331 2367 5.643379 ATGGCAAAGTGTTTACATGTAGG 57.357 39.130 5.56 0.00 0.00 3.18
2332 2368 3.823873 TGGCAAAGTGTTTACATGTAGGG 59.176 43.478 5.56 0.00 0.00 3.53
2333 2369 4.076394 GGCAAAGTGTTTACATGTAGGGA 58.924 43.478 5.56 0.00 0.00 4.20
2334 2370 4.705023 GGCAAAGTGTTTACATGTAGGGAT 59.295 41.667 5.56 0.00 0.00 3.85
2335 2371 5.393027 GGCAAAGTGTTTACATGTAGGGATG 60.393 44.000 5.56 2.45 0.00 3.51
2336 2372 5.393027 GCAAAGTGTTTACATGTAGGGATGG 60.393 44.000 5.56 0.00 0.00 3.51
2337 2373 3.886123 AGTGTTTACATGTAGGGATGGC 58.114 45.455 5.56 0.00 0.00 4.40
2338 2374 3.265737 AGTGTTTACATGTAGGGATGGCA 59.734 43.478 5.56 0.00 0.00 4.92
2339 2375 4.013728 GTGTTTACATGTAGGGATGGCAA 58.986 43.478 5.56 0.00 0.00 4.52
2340 2376 4.644685 GTGTTTACATGTAGGGATGGCAAT 59.355 41.667 5.56 0.00 0.00 3.56
2341 2377 5.127031 GTGTTTACATGTAGGGATGGCAATT 59.873 40.000 5.56 0.00 0.00 2.32
2342 2378 5.719085 TGTTTACATGTAGGGATGGCAATTT 59.281 36.000 5.56 0.00 0.00 1.82
2343 2379 6.212388 TGTTTACATGTAGGGATGGCAATTTT 59.788 34.615 5.56 0.00 0.00 1.82
2344 2380 7.397476 TGTTTACATGTAGGGATGGCAATTTTA 59.603 33.333 5.56 0.00 0.00 1.52
2345 2381 8.421002 GTTTACATGTAGGGATGGCAATTTTAT 58.579 33.333 5.56 0.00 0.00 1.40
2346 2382 6.655078 ACATGTAGGGATGGCAATTTTATC 57.345 37.500 0.00 0.00 0.00 1.75
2347 2383 5.539955 ACATGTAGGGATGGCAATTTTATCC 59.460 40.000 0.00 0.00 39.69 2.59
2348 2384 5.136068 TGTAGGGATGGCAATTTTATCCA 57.864 39.130 12.15 2.49 41.69 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
291 292 6.992715 CCCTTCATGACTCGTTTAGGAATAAT 59.007 38.462 8.63 0.00 0.00 1.28
531 534 6.903883 AAAATAAAGCGACATCGTGTCTAT 57.096 33.333 13.65 4.96 44.85 1.98
685 689 9.674068 ACTTATCGAGTATAGAATAGATCTGCA 57.326 33.333 5.18 0.00 36.41 4.41
1208 1214 2.111251 GAGATTAGCCACCCGCCC 59.889 66.667 0.00 0.00 38.78 6.13
1355 1391 2.353011 CGGCTTCCATGCAAAAATGTCT 60.353 45.455 0.00 0.00 34.04 3.41
1551 1587 1.134521 CACCGGATTAGCAAGCCACTA 60.135 52.381 9.46 0.00 36.54 2.74
1642 1678 1.222567 GGGGAGGGCAAAAGGATCTA 58.777 55.000 0.00 0.00 0.00 1.98
1831 1867 0.630673 TTGATAGGTGGCTTGGGCAT 59.369 50.000 0.00 0.00 40.92 4.40
1898 1934 6.127310 GCCTGGAGTATATTCAATACTCGGAT 60.127 42.308 16.72 0.00 46.97 4.18
1899 1935 5.185249 GCCTGGAGTATATTCAATACTCGGA 59.815 44.000 16.72 8.33 46.97 4.55
1900 1936 5.047306 TGCCTGGAGTATATTCAATACTCGG 60.047 44.000 15.40 13.40 46.97 4.63
1901 1937 6.025749 TGCCTGGAGTATATTCAATACTCG 57.974 41.667 15.40 6.62 46.97 4.18
1902 1938 6.876257 CCTTGCCTGGAGTATATTCAATACTC 59.124 42.308 14.13 14.13 45.91 2.59
1903 1939 6.745474 GCCTTGCCTGGAGTATATTCAATACT 60.745 42.308 0.00 0.00 37.53 2.12
1904 1940 5.412904 GCCTTGCCTGGAGTATATTCAATAC 59.587 44.000 0.00 0.00 0.00 1.89
1905 1941 5.514834 GGCCTTGCCTGGAGTATATTCAATA 60.515 44.000 0.00 0.00 46.69 1.90
1906 1942 4.401925 GCCTTGCCTGGAGTATATTCAAT 58.598 43.478 0.00 0.00 0.00 2.57
1907 1943 3.435026 GGCCTTGCCTGGAGTATATTCAA 60.435 47.826 0.00 0.00 46.69 2.69
1908 1944 2.106511 GGCCTTGCCTGGAGTATATTCA 59.893 50.000 0.00 0.00 46.69 2.57
1909 1945 2.784347 GGCCTTGCCTGGAGTATATTC 58.216 52.381 0.00 0.00 46.69 1.75
1910 1946 2.959465 GGCCTTGCCTGGAGTATATT 57.041 50.000 0.00 0.00 46.69 1.28
1922 1958 1.734117 GCAACGACATTGGCCTTGC 60.734 57.895 9.92 9.92 38.88 4.01
1923 1959 0.387622 CAGCAACGACATTGGCCTTG 60.388 55.000 3.32 4.28 38.88 3.61
1924 1960 0.537143 TCAGCAACGACATTGGCCTT 60.537 50.000 3.32 0.00 38.88 4.35
1925 1961 0.322816 ATCAGCAACGACATTGGCCT 60.323 50.000 3.32 0.00 38.88 5.19
1926 1962 0.179156 CATCAGCAACGACATTGGCC 60.179 55.000 0.00 0.00 38.88 5.36
1927 1963 0.799534 GCATCAGCAACGACATTGGC 60.800 55.000 0.00 0.00 41.58 4.52
1928 1964 0.806868 AGCATCAGCAACGACATTGG 59.193 50.000 0.00 0.00 45.49 3.16
1929 1965 2.624316 AAGCATCAGCAACGACATTG 57.376 45.000 0.00 0.00 45.49 2.82
1930 1966 2.553602 TCAAAGCATCAGCAACGACATT 59.446 40.909 0.00 0.00 45.49 2.71
1931 1967 2.153645 TCAAAGCATCAGCAACGACAT 58.846 42.857 0.00 0.00 45.49 3.06
1932 1968 1.532437 CTCAAAGCATCAGCAACGACA 59.468 47.619 0.00 0.00 45.49 4.35
1933 1969 1.727213 GCTCAAAGCATCAGCAACGAC 60.727 52.381 0.00 0.00 45.49 4.34
1934 1970 0.518636 GCTCAAAGCATCAGCAACGA 59.481 50.000 0.00 0.00 45.49 3.85
1935 1971 0.791983 CGCTCAAAGCATCAGCAACG 60.792 55.000 0.00 0.00 42.58 4.10
1936 1972 0.455633 CCGCTCAAAGCATCAGCAAC 60.456 55.000 0.00 0.00 42.58 4.17
1937 1973 1.588824 CCCGCTCAAAGCATCAGCAA 61.589 55.000 0.00 0.00 42.58 3.91
1938 1974 2.042259 CCCGCTCAAAGCATCAGCA 61.042 57.895 0.00 0.00 42.58 4.41
1939 1975 1.308069 TTCCCGCTCAAAGCATCAGC 61.308 55.000 0.00 0.00 42.58 4.26
1940 1976 0.731417 CTTCCCGCTCAAAGCATCAG 59.269 55.000 0.00 0.00 42.58 2.90
1941 1977 0.677731 CCTTCCCGCTCAAAGCATCA 60.678 55.000 0.00 0.00 42.58 3.07
1942 1978 1.997928 GCCTTCCCGCTCAAAGCATC 61.998 60.000 0.00 0.00 42.58 3.91
1943 1979 2.048603 GCCTTCCCGCTCAAAGCAT 61.049 57.895 0.00 0.00 42.58 3.79
1944 1980 2.672996 GCCTTCCCGCTCAAAGCA 60.673 61.111 0.00 0.00 42.58 3.91
1945 1981 0.676782 TAAGCCTTCCCGCTCAAAGC 60.677 55.000 0.00 0.00 38.44 3.51
1946 1982 1.087501 GTAAGCCTTCCCGCTCAAAG 58.912 55.000 0.00 0.00 38.44 2.77
1947 1983 0.690762 AGTAAGCCTTCCCGCTCAAA 59.309 50.000 0.00 0.00 38.44 2.69
1948 1984 1.206371 GTAGTAAGCCTTCCCGCTCAA 59.794 52.381 0.00 0.00 38.44 3.02
1949 1985 0.822164 GTAGTAAGCCTTCCCGCTCA 59.178 55.000 0.00 0.00 38.44 4.26
1950 1986 0.822164 TGTAGTAAGCCTTCCCGCTC 59.178 55.000 0.00 0.00 38.44 5.03
1951 1987 1.066358 GTTGTAGTAAGCCTTCCCGCT 60.066 52.381 0.00 0.00 42.22 5.52
1952 1988 1.338389 TGTTGTAGTAAGCCTTCCCGC 60.338 52.381 0.00 0.00 0.00 6.13
1953 1989 2.618053 CTGTTGTAGTAAGCCTTCCCG 58.382 52.381 0.00 0.00 0.00 5.14
1954 1990 2.027100 AGCTGTTGTAGTAAGCCTTCCC 60.027 50.000 0.00 0.00 37.68 3.97
1955 1991 3.336138 AGCTGTTGTAGTAAGCCTTCC 57.664 47.619 0.00 0.00 37.68 3.46
1956 1992 6.986904 ATTAAGCTGTTGTAGTAAGCCTTC 57.013 37.500 0.00 0.00 37.68 3.46
1957 1993 7.168905 AGAATTAAGCTGTTGTAGTAAGCCTT 58.831 34.615 0.00 0.00 37.68 4.35
1958 1994 6.712276 AGAATTAAGCTGTTGTAGTAAGCCT 58.288 36.000 0.00 0.00 37.68 4.58
1959 1995 6.594159 TGAGAATTAAGCTGTTGTAGTAAGCC 59.406 38.462 0.00 0.00 37.68 4.35
1960 1996 7.201565 CCTGAGAATTAAGCTGTTGTAGTAAGC 60.202 40.741 0.00 0.00 37.20 3.09
1961 1997 7.819900 ACCTGAGAATTAAGCTGTTGTAGTAAG 59.180 37.037 0.00 0.00 0.00 2.34
1962 1998 7.676947 ACCTGAGAATTAAGCTGTTGTAGTAA 58.323 34.615 0.00 0.00 0.00 2.24
1963 1999 7.241042 ACCTGAGAATTAAGCTGTTGTAGTA 57.759 36.000 0.00 0.00 0.00 1.82
1964 2000 6.115448 ACCTGAGAATTAAGCTGTTGTAGT 57.885 37.500 0.00 0.00 0.00 2.73
1965 2001 5.582665 GGACCTGAGAATTAAGCTGTTGTAG 59.417 44.000 0.00 0.00 0.00 2.74
1966 2002 5.248477 AGGACCTGAGAATTAAGCTGTTGTA 59.752 40.000 0.00 0.00 0.00 2.41
1967 2003 4.042187 AGGACCTGAGAATTAAGCTGTTGT 59.958 41.667 0.00 0.00 0.00 3.32
1968 2004 4.583871 AGGACCTGAGAATTAAGCTGTTG 58.416 43.478 0.00 0.00 0.00 3.33
1969 2005 4.917906 AGGACCTGAGAATTAAGCTGTT 57.082 40.909 0.00 0.00 0.00 3.16
1970 2006 4.323868 GGAAGGACCTGAGAATTAAGCTGT 60.324 45.833 0.00 0.00 35.41 4.40
1971 2007 4.195416 GGAAGGACCTGAGAATTAAGCTG 58.805 47.826 0.00 0.00 35.41 4.24
1972 2008 3.846588 TGGAAGGACCTGAGAATTAAGCT 59.153 43.478 0.00 0.00 39.86 3.74
1973 2009 4.222124 TGGAAGGACCTGAGAATTAAGC 57.778 45.455 0.00 0.00 39.86 3.09
1974 2010 4.944317 GGTTGGAAGGACCTGAGAATTAAG 59.056 45.833 0.00 0.00 39.86 1.85
1975 2011 4.564821 CGGTTGGAAGGACCTGAGAATTAA 60.565 45.833 0.00 0.00 39.86 1.40
1976 2012 3.055385 CGGTTGGAAGGACCTGAGAATTA 60.055 47.826 0.00 0.00 39.86 1.40
1977 2013 2.290323 CGGTTGGAAGGACCTGAGAATT 60.290 50.000 0.00 0.00 39.86 2.17
1978 2014 1.279271 CGGTTGGAAGGACCTGAGAAT 59.721 52.381 0.00 0.00 39.86 2.40
1979 2015 0.685097 CGGTTGGAAGGACCTGAGAA 59.315 55.000 0.00 0.00 39.86 2.87
1980 2016 1.192146 CCGGTTGGAAGGACCTGAGA 61.192 60.000 0.00 0.00 39.86 3.27
1981 2017 1.192146 TCCGGTTGGAAGGACCTGAG 61.192 60.000 0.00 0.00 42.85 3.35
1982 2018 1.152204 TCCGGTTGGAAGGACCTGA 60.152 57.895 0.00 0.00 42.85 3.86
1983 2019 3.478780 TCCGGTTGGAAGGACCTG 58.521 61.111 0.00 0.00 42.85 4.00
1991 2027 0.547075 TTCACAAAGGTCCGGTTGGA 59.453 50.000 0.00 0.00 43.88 3.53
1992 2028 0.951558 CTTCACAAAGGTCCGGTTGG 59.048 55.000 0.00 0.00 0.00 3.77
1993 2029 0.310854 GCTTCACAAAGGTCCGGTTG 59.689 55.000 0.00 0.25 32.79 3.77
1994 2030 0.182775 AGCTTCACAAAGGTCCGGTT 59.817 50.000 0.00 0.00 38.90 4.44
1995 2031 0.182775 AAGCTTCACAAAGGTCCGGT 59.817 50.000 0.00 0.00 42.27 5.28
1996 2032 1.266989 GAAAGCTTCACAAAGGTCCGG 59.733 52.381 0.00 0.00 42.27 5.14
1997 2033 1.266989 GGAAAGCTTCACAAAGGTCCG 59.733 52.381 0.00 0.00 42.27 4.79
1998 2034 1.266989 CGGAAAGCTTCACAAAGGTCC 59.733 52.381 0.00 0.00 42.27 4.46
1999 2035 1.335051 GCGGAAAGCTTCACAAAGGTC 60.335 52.381 0.00 0.00 42.27 3.85
2000 2036 0.668535 GCGGAAAGCTTCACAAAGGT 59.331 50.000 0.00 0.00 44.93 3.50
2001 2037 3.479255 GCGGAAAGCTTCACAAAGG 57.521 52.632 0.00 0.00 44.04 3.11
2012 2048 5.048713 ACTTGGAGATTTAGTTTGCGGAAAG 60.049 40.000 0.93 0.00 0.00 2.62
2013 2049 4.825085 ACTTGGAGATTTAGTTTGCGGAAA 59.175 37.500 0.00 0.00 0.00 3.13
2014 2050 4.394729 ACTTGGAGATTTAGTTTGCGGAA 58.605 39.130 0.00 0.00 0.00 4.30
2015 2051 4.015872 ACTTGGAGATTTAGTTTGCGGA 57.984 40.909 0.00 0.00 0.00 5.54
2016 2052 4.023193 ACAACTTGGAGATTTAGTTTGCGG 60.023 41.667 0.00 0.00 30.08 5.69
2017 2053 5.108385 ACAACTTGGAGATTTAGTTTGCG 57.892 39.130 0.00 0.00 30.08 4.85
2018 2054 5.920840 GGAACAACTTGGAGATTTAGTTTGC 59.079 40.000 0.00 0.00 30.08 3.68
2019 2055 7.013274 TGAGGAACAACTTGGAGATTTAGTTTG 59.987 37.037 0.00 0.00 30.08 2.93
2020 2056 7.060421 TGAGGAACAACTTGGAGATTTAGTTT 58.940 34.615 0.00 0.00 30.08 2.66
2021 2057 6.601332 TGAGGAACAACTTGGAGATTTAGTT 58.399 36.000 0.00 0.00 32.60 2.24
2022 2058 6.187727 TGAGGAACAACTTGGAGATTTAGT 57.812 37.500 0.00 0.00 0.00 2.24
2023 2059 6.150140 CCTTGAGGAACAACTTGGAGATTTAG 59.850 42.308 0.00 0.00 37.39 1.85
2024 2060 6.003950 CCTTGAGGAACAACTTGGAGATTTA 58.996 40.000 0.00 0.00 37.39 1.40
2025 2061 4.829492 CCTTGAGGAACAACTTGGAGATTT 59.171 41.667 0.00 0.00 37.39 2.17
2026 2062 4.401925 CCTTGAGGAACAACTTGGAGATT 58.598 43.478 0.00 0.00 37.39 2.40
2027 2063 3.812167 GCCTTGAGGAACAACTTGGAGAT 60.812 47.826 0.06 0.00 37.39 2.75
2028 2064 2.487265 GCCTTGAGGAACAACTTGGAGA 60.487 50.000 0.06 0.00 37.39 3.71
2029 2065 1.882623 GCCTTGAGGAACAACTTGGAG 59.117 52.381 0.06 0.00 37.39 3.86
2030 2066 1.494721 AGCCTTGAGGAACAACTTGGA 59.505 47.619 0.06 0.00 37.39 3.53
2031 2067 1.986882 AGCCTTGAGGAACAACTTGG 58.013 50.000 0.06 0.00 37.39 3.61
2032 2068 3.633986 AGAAAGCCTTGAGGAACAACTTG 59.366 43.478 0.06 0.00 37.39 3.16
2033 2069 3.633986 CAGAAAGCCTTGAGGAACAACTT 59.366 43.478 0.06 0.00 37.39 2.66
2034 2070 3.217626 CAGAAAGCCTTGAGGAACAACT 58.782 45.455 0.06 0.00 37.39 3.16
2035 2071 2.294512 CCAGAAAGCCTTGAGGAACAAC 59.705 50.000 0.06 0.00 37.39 3.32
2036 2072 2.586425 CCAGAAAGCCTTGAGGAACAA 58.414 47.619 0.06 0.00 37.39 2.83
2037 2073 1.819305 GCCAGAAAGCCTTGAGGAACA 60.819 52.381 0.06 0.00 37.39 3.18
2038 2074 0.884514 GCCAGAAAGCCTTGAGGAAC 59.115 55.000 0.06 0.00 37.39 3.62
2039 2075 3.346426 GCCAGAAAGCCTTGAGGAA 57.654 52.632 0.06 0.00 37.39 3.36
2048 2084 3.026694 ACTTGGATATTGGCCAGAAAGC 58.973 45.455 5.11 0.00 36.64 3.51
2049 2085 4.530875 AGACTTGGATATTGGCCAGAAAG 58.469 43.478 5.11 7.49 36.64 2.62
2050 2086 4.228210 AGAGACTTGGATATTGGCCAGAAA 59.772 41.667 5.11 0.00 36.64 2.52
2051 2087 3.782523 AGAGACTTGGATATTGGCCAGAA 59.217 43.478 5.11 0.00 36.64 3.02
2052 2088 3.387962 AGAGACTTGGATATTGGCCAGA 58.612 45.455 5.11 0.00 36.64 3.86
2053 2089 3.495806 GGAGAGACTTGGATATTGGCCAG 60.496 52.174 5.11 0.00 36.64 4.85
2054 2090 2.439507 GGAGAGACTTGGATATTGGCCA 59.560 50.000 0.00 0.00 0.00 5.36
2055 2091 2.708325 AGGAGAGACTTGGATATTGGCC 59.292 50.000 0.00 0.00 0.00 5.36
2056 2092 4.591072 AGTAGGAGAGACTTGGATATTGGC 59.409 45.833 0.00 0.00 0.00 4.52
2057 2093 6.739331 AAGTAGGAGAGACTTGGATATTGG 57.261 41.667 0.00 0.00 35.80 3.16
2058 2094 6.989169 CCAAAGTAGGAGAGACTTGGATATTG 59.011 42.308 0.00 0.00 37.22 1.90
2059 2095 6.903534 TCCAAAGTAGGAGAGACTTGGATATT 59.096 38.462 0.00 0.00 37.22 1.28
2060 2096 6.444704 TCCAAAGTAGGAGAGACTTGGATAT 58.555 40.000 0.00 0.00 37.22 1.63
2061 2097 5.838955 TCCAAAGTAGGAGAGACTTGGATA 58.161 41.667 0.00 0.00 37.22 2.59
2062 2098 4.689062 TCCAAAGTAGGAGAGACTTGGAT 58.311 43.478 0.00 0.00 37.22 3.41
2063 2099 4.127918 TCCAAAGTAGGAGAGACTTGGA 57.872 45.455 0.00 0.00 37.22 3.53
2064 2100 4.528596 TCTTCCAAAGTAGGAGAGACTTGG 59.471 45.833 0.00 0.00 39.25 3.61
2065 2101 5.730296 TCTTCCAAAGTAGGAGAGACTTG 57.270 43.478 0.00 0.00 39.25 3.16
2066 2102 6.019748 TGATCTTCCAAAGTAGGAGAGACTT 58.980 40.000 0.00 0.00 39.25 3.01
2067 2103 5.584913 TGATCTTCCAAAGTAGGAGAGACT 58.415 41.667 0.00 0.00 39.25 3.24
2068 2104 5.923733 TGATCTTCCAAAGTAGGAGAGAC 57.076 43.478 0.00 0.00 39.25 3.36
2069 2105 6.935240 TTTGATCTTCCAAAGTAGGAGAGA 57.065 37.500 0.00 0.00 39.25 3.10
2070 2106 7.826252 TGAATTTGATCTTCCAAAGTAGGAGAG 59.174 37.037 0.00 0.00 39.13 3.20
2071 2107 7.689299 TGAATTTGATCTTCCAAAGTAGGAGA 58.311 34.615 0.00 0.00 39.13 3.71
2072 2108 7.928307 TGAATTTGATCTTCCAAAGTAGGAG 57.072 36.000 0.00 0.00 39.13 3.69
2073 2109 8.108999 TCATGAATTTGATCTTCCAAAGTAGGA 58.891 33.333 0.00 0.00 39.13 2.94
2074 2110 8.284945 TCATGAATTTGATCTTCCAAAGTAGG 57.715 34.615 0.00 0.00 39.13 3.18
2075 2111 8.404000 CCTCATGAATTTGATCTTCCAAAGTAG 58.596 37.037 0.00 0.00 39.13 2.57
2076 2112 7.148018 GCCTCATGAATTTGATCTTCCAAAGTA 60.148 37.037 0.00 0.00 39.13 2.24
2077 2113 6.350780 GCCTCATGAATTTGATCTTCCAAAGT 60.351 38.462 0.00 0.00 39.13 2.66
2078 2114 6.040878 GCCTCATGAATTTGATCTTCCAAAG 58.959 40.000 0.00 0.00 39.13 2.77
2079 2115 5.481122 TGCCTCATGAATTTGATCTTCCAAA 59.519 36.000 0.00 0.00 39.93 3.28
2080 2116 5.018149 TGCCTCATGAATTTGATCTTCCAA 58.982 37.500 0.00 0.00 0.00 3.53
2081 2117 4.400251 GTGCCTCATGAATTTGATCTTCCA 59.600 41.667 0.00 0.00 0.00 3.53
2082 2118 4.400251 TGTGCCTCATGAATTTGATCTTCC 59.600 41.667 0.00 0.00 0.00 3.46
2083 2119 5.571784 TGTGCCTCATGAATTTGATCTTC 57.428 39.130 0.00 0.00 0.00 2.87
2084 2120 5.479375 AGTTGTGCCTCATGAATTTGATCTT 59.521 36.000 0.00 0.00 0.00 2.40
2085 2121 5.014858 AGTTGTGCCTCATGAATTTGATCT 58.985 37.500 0.00 0.00 0.00 2.75
2086 2122 5.320549 AGTTGTGCCTCATGAATTTGATC 57.679 39.130 0.00 0.00 0.00 2.92
2087 2123 5.479375 AGAAGTTGTGCCTCATGAATTTGAT 59.521 36.000 0.00 0.00 0.00 2.57
2088 2124 4.828939 AGAAGTTGTGCCTCATGAATTTGA 59.171 37.500 0.00 0.00 0.00 2.69
2089 2125 5.130292 AGAAGTTGTGCCTCATGAATTTG 57.870 39.130 0.00 0.00 0.00 2.32
2090 2126 5.302568 TCAAGAAGTTGTGCCTCATGAATTT 59.697 36.000 0.00 0.00 34.98 1.82
2091 2127 4.828939 TCAAGAAGTTGTGCCTCATGAATT 59.171 37.500 0.00 0.00 34.98 2.17
2092 2128 4.401022 TCAAGAAGTTGTGCCTCATGAAT 58.599 39.130 0.00 0.00 34.98 2.57
2093 2129 3.819368 TCAAGAAGTTGTGCCTCATGAA 58.181 40.909 0.00 0.00 34.98 2.57
2094 2130 3.490439 TCAAGAAGTTGTGCCTCATGA 57.510 42.857 0.00 0.00 34.98 3.07
2095 2131 4.380233 GGAATCAAGAAGTTGTGCCTCATG 60.380 45.833 0.00 0.00 34.98 3.07
2096 2132 3.760684 GGAATCAAGAAGTTGTGCCTCAT 59.239 43.478 0.00 0.00 34.98 2.90
2097 2133 3.149196 GGAATCAAGAAGTTGTGCCTCA 58.851 45.455 0.00 0.00 34.98 3.86
2098 2134 3.149196 TGGAATCAAGAAGTTGTGCCTC 58.851 45.455 0.00 0.00 34.98 4.70
2099 2135 3.228188 TGGAATCAAGAAGTTGTGCCT 57.772 42.857 0.00 0.00 34.98 4.75
2100 2136 3.367703 CCATGGAATCAAGAAGTTGTGCC 60.368 47.826 5.56 0.00 34.98 5.01
2101 2137 3.256631 ACCATGGAATCAAGAAGTTGTGC 59.743 43.478 21.47 0.00 34.98 4.57
2102 2138 4.279169 ACACCATGGAATCAAGAAGTTGTG 59.721 41.667 21.47 2.98 34.98 3.33
2103 2139 4.473444 ACACCATGGAATCAAGAAGTTGT 58.527 39.130 21.47 4.42 34.98 3.32
2104 2140 4.378770 CGACACCATGGAATCAAGAAGTTG 60.379 45.833 21.47 3.69 34.67 3.16
2105 2141 3.753272 CGACACCATGGAATCAAGAAGTT 59.247 43.478 21.47 0.00 0.00 2.66
2106 2142 3.338249 CGACACCATGGAATCAAGAAGT 58.662 45.455 21.47 2.21 0.00 3.01
2107 2143 2.679837 CCGACACCATGGAATCAAGAAG 59.320 50.000 21.47 2.20 0.00 2.85
2108 2144 2.617788 CCCGACACCATGGAATCAAGAA 60.618 50.000 21.47 0.00 0.00 2.52
2109 2145 1.065491 CCCGACACCATGGAATCAAGA 60.065 52.381 21.47 0.00 0.00 3.02
2110 2146 1.382522 CCCGACACCATGGAATCAAG 58.617 55.000 21.47 9.05 0.00 3.02
2111 2147 0.034574 CCCCGACACCATGGAATCAA 60.035 55.000 21.47 0.00 0.00 2.57
2112 2148 1.204786 ACCCCGACACCATGGAATCA 61.205 55.000 21.47 0.00 0.00 2.57
2113 2149 0.034477 AACCCCGACACCATGGAATC 60.034 55.000 21.47 14.05 0.00 2.52
2114 2150 0.407918 AAACCCCGACACCATGGAAT 59.592 50.000 21.47 5.31 0.00 3.01
2115 2151 0.538516 CAAACCCCGACACCATGGAA 60.539 55.000 21.47 0.00 0.00 3.53
2116 2152 1.074072 CAAACCCCGACACCATGGA 59.926 57.895 21.47 0.00 0.00 3.41
2117 2153 1.976474 CCAAACCCCGACACCATGG 60.976 63.158 11.19 11.19 0.00 3.66
2118 2154 1.976474 CCCAAACCCCGACACCATG 60.976 63.158 0.00 0.00 0.00 3.66
2119 2155 2.438795 CCCAAACCCCGACACCAT 59.561 61.111 0.00 0.00 0.00 3.55
2120 2156 3.097830 ACCCAAACCCCGACACCA 61.098 61.111 0.00 0.00 0.00 4.17
2121 2157 2.596338 CACCCAAACCCCGACACC 60.596 66.667 0.00 0.00 0.00 4.16
2122 2158 3.292159 GCACCCAAACCCCGACAC 61.292 66.667 0.00 0.00 0.00 3.67
2123 2159 4.939368 CGCACCCAAACCCCGACA 62.939 66.667 0.00 0.00 0.00 4.35
2124 2160 4.629523 TCGCACCCAAACCCCGAC 62.630 66.667 0.00 0.00 0.00 4.79
2125 2161 4.629523 GTCGCACCCAAACCCCGA 62.630 66.667 0.00 0.00 0.00 5.14
2126 2162 2.806503 TATGTCGCACCCAAACCCCG 62.807 60.000 0.00 0.00 0.00 5.73
2127 2163 0.395173 ATATGTCGCACCCAAACCCC 60.395 55.000 0.00 0.00 0.00 4.95
2128 2164 0.738389 CATATGTCGCACCCAAACCC 59.262 55.000 0.00 0.00 0.00 4.11
2129 2165 0.100503 GCATATGTCGCACCCAAACC 59.899 55.000 4.29 0.00 0.00 3.27
2130 2166 0.100503 GGCATATGTCGCACCCAAAC 59.899 55.000 4.29 0.00 0.00 2.93
2131 2167 0.322906 TGGCATATGTCGCACCCAAA 60.323 50.000 2.28 0.00 0.00 3.28
2132 2168 0.322906 TTGGCATATGTCGCACCCAA 60.323 50.000 2.28 4.61 0.00 4.12
2133 2169 0.322906 TTTGGCATATGTCGCACCCA 60.323 50.000 2.28 0.00 0.00 4.51
2134 2170 0.381801 CTTTGGCATATGTCGCACCC 59.618 55.000 2.28 0.00 0.00 4.61
2135 2171 0.381801 CCTTTGGCATATGTCGCACC 59.618 55.000 2.28 0.00 0.00 5.01
2136 2172 1.378531 TCCTTTGGCATATGTCGCAC 58.621 50.000 2.28 0.00 0.00 5.34
2137 2173 1.948834 CATCCTTTGGCATATGTCGCA 59.051 47.619 2.28 0.00 0.00 5.10
2138 2174 1.267806 CCATCCTTTGGCATATGTCGC 59.732 52.381 2.28 0.00 39.09 5.19
2149 2185 3.319972 CCACCATGATAAGCCATCCTTTG 59.680 47.826 0.00 0.00 34.95 2.77
2150 2186 3.569491 CCACCATGATAAGCCATCCTTT 58.431 45.455 0.00 0.00 34.95 3.11
2151 2187 2.158415 CCCACCATGATAAGCCATCCTT 60.158 50.000 0.00 0.00 37.57 3.36
2152 2188 1.426598 CCCACCATGATAAGCCATCCT 59.573 52.381 0.00 0.00 32.09 3.24
2153 2189 1.548582 CCCCACCATGATAAGCCATCC 60.549 57.143 0.00 0.00 32.09 3.51
2154 2190 1.548582 CCCCCACCATGATAAGCCATC 60.549 57.143 0.00 0.00 0.00 3.51
2155 2191 0.484212 CCCCCACCATGATAAGCCAT 59.516 55.000 0.00 0.00 0.00 4.40
2156 2192 1.929745 CCCCCACCATGATAAGCCA 59.070 57.895 0.00 0.00 0.00 4.75
2157 2193 1.531602 GCCCCCACCATGATAAGCC 60.532 63.158 0.00 0.00 0.00 4.35
2158 2194 1.898574 CGCCCCCACCATGATAAGC 60.899 63.158 0.00 0.00 0.00 3.09
2159 2195 0.250467 CTCGCCCCCACCATGATAAG 60.250 60.000 0.00 0.00 0.00 1.73
2160 2196 0.986019 ACTCGCCCCCACCATGATAA 60.986 55.000 0.00 0.00 0.00 1.75
2161 2197 0.105401 TACTCGCCCCCACCATGATA 60.105 55.000 0.00 0.00 0.00 2.15
2162 2198 1.383943 TACTCGCCCCCACCATGAT 60.384 57.895 0.00 0.00 0.00 2.45
2163 2199 2.039787 TACTCGCCCCCACCATGA 59.960 61.111 0.00 0.00 0.00 3.07
2164 2200 1.622607 TTCTACTCGCCCCCACCATG 61.623 60.000 0.00 0.00 0.00 3.66
2165 2201 1.306654 TTCTACTCGCCCCCACCAT 60.307 57.895 0.00 0.00 0.00 3.55
2166 2202 2.120940 TTCTACTCGCCCCCACCA 59.879 61.111 0.00 0.00 0.00 4.17
2167 2203 2.582978 GTTCTACTCGCCCCCACC 59.417 66.667 0.00 0.00 0.00 4.61
2168 2204 2.183555 CGTTCTACTCGCCCCCAC 59.816 66.667 0.00 0.00 0.00 4.61
2169 2205 2.283388 ACGTTCTACTCGCCCCCA 60.283 61.111 0.00 0.00 0.00 4.96
2170 2206 2.493501 GACGTTCTACTCGCCCCC 59.506 66.667 0.00 0.00 0.00 5.40
2171 2207 2.101770 CGACGTTCTACTCGCCCC 59.898 66.667 0.00 0.00 0.00 5.80
2190 2226 3.622060 ATCCCGTTTCCAGGCACCG 62.622 63.158 0.00 0.00 0.00 4.94
2191 2227 2.046285 CATCCCGTTTCCAGGCACC 61.046 63.158 0.00 0.00 0.00 5.01
2192 2228 1.002624 TCATCCCGTTTCCAGGCAC 60.003 57.895 0.00 0.00 0.00 5.01
2193 2229 1.299648 CTCATCCCGTTTCCAGGCA 59.700 57.895 0.00 0.00 0.00 4.75
2194 2230 1.452108 CCTCATCCCGTTTCCAGGC 60.452 63.158 0.00 0.00 0.00 4.85
2195 2231 1.452108 GCCTCATCCCGTTTCCAGG 60.452 63.158 0.00 0.00 0.00 4.45
2196 2232 1.815421 CGCCTCATCCCGTTTCCAG 60.815 63.158 0.00 0.00 0.00 3.86
2197 2233 1.832719 TTCGCCTCATCCCGTTTCCA 61.833 55.000 0.00 0.00 0.00 3.53
2198 2234 1.078708 TTCGCCTCATCCCGTTTCC 60.079 57.895 0.00 0.00 0.00 3.13
2199 2235 0.108329 TCTTCGCCTCATCCCGTTTC 60.108 55.000 0.00 0.00 0.00 2.78
2200 2236 0.391263 GTCTTCGCCTCATCCCGTTT 60.391 55.000 0.00 0.00 0.00 3.60
2201 2237 1.218316 GTCTTCGCCTCATCCCGTT 59.782 57.895 0.00 0.00 0.00 4.44
2202 2238 1.330655 ATGTCTTCGCCTCATCCCGT 61.331 55.000 0.00 0.00 0.00 5.28
2203 2239 0.877649 CATGTCTTCGCCTCATCCCG 60.878 60.000 0.00 0.00 0.00 5.14
2204 2240 1.162800 GCATGTCTTCGCCTCATCCC 61.163 60.000 0.00 0.00 0.00 3.85
2205 2241 0.462581 TGCATGTCTTCGCCTCATCC 60.463 55.000 0.00 0.00 0.00 3.51
2206 2242 0.654683 GTGCATGTCTTCGCCTCATC 59.345 55.000 0.00 0.00 0.00 2.92
2207 2243 1.086067 CGTGCATGTCTTCGCCTCAT 61.086 55.000 0.00 0.00 0.00 2.90
2208 2244 1.737735 CGTGCATGTCTTCGCCTCA 60.738 57.895 0.00 0.00 0.00 3.86
2209 2245 3.084579 CGTGCATGTCTTCGCCTC 58.915 61.111 0.00 0.00 0.00 4.70
2210 2246 3.121030 GCGTGCATGTCTTCGCCT 61.121 61.111 7.93 0.00 42.33 5.52
2212 2248 4.505217 CGGCGTGCATGTCTTCGC 62.505 66.667 9.20 8.80 46.42 4.70
2213 2249 3.853330 CCGGCGTGCATGTCTTCG 61.853 66.667 9.20 7.41 0.00 3.79
2214 2250 2.742372 ACCGGCGTGCATGTCTTC 60.742 61.111 9.20 0.00 0.00 2.87
2215 2251 3.049674 CACCGGCGTGCATGTCTT 61.050 61.111 9.20 0.00 32.04 3.01
2216 2252 2.803155 ATTCACCGGCGTGCATGTCT 62.803 55.000 9.20 0.00 40.04 3.41
2217 2253 2.309764 GATTCACCGGCGTGCATGTC 62.310 60.000 6.01 3.62 40.04 3.06
2218 2254 2.359850 ATTCACCGGCGTGCATGT 60.360 55.556 6.01 0.00 40.04 3.21
2219 2255 1.647545 AAGATTCACCGGCGTGCATG 61.648 55.000 6.01 0.09 40.04 4.06
2220 2256 0.107897 TAAGATTCACCGGCGTGCAT 60.108 50.000 6.01 0.00 40.04 3.96
2221 2257 1.017177 GTAAGATTCACCGGCGTGCA 61.017 55.000 6.01 0.00 40.04 4.57
2222 2258 1.702491 GGTAAGATTCACCGGCGTGC 61.702 60.000 6.01 0.00 40.04 5.34
2223 2259 1.087771 GGGTAAGATTCACCGGCGTG 61.088 60.000 6.01 4.55 41.72 5.34
2224 2260 1.219935 GGGTAAGATTCACCGGCGT 59.780 57.895 6.01 0.00 36.89 5.68
2225 2261 0.810031 CTGGGTAAGATTCACCGGCG 60.810 60.000 0.00 0.00 36.89 6.46
2226 2262 1.095807 GCTGGGTAAGATTCACCGGC 61.096 60.000 0.00 0.00 46.85 6.13
2227 2263 0.541863 AGCTGGGTAAGATTCACCGG 59.458 55.000 0.00 0.00 36.89 5.28
2228 2264 2.403252 AAGCTGGGTAAGATTCACCG 57.597 50.000 0.00 0.00 36.89 4.94
2233 2269 1.064389 GCCCTGAAGCTGGGTAAGATT 60.064 52.381 9.27 0.00 43.39 2.40
2234 2270 0.548510 GCCCTGAAGCTGGGTAAGAT 59.451 55.000 9.27 0.00 43.39 2.40
2235 2271 0.547712 AGCCCTGAAGCTGGGTAAGA 60.548 55.000 9.27 0.00 42.95 2.10
2236 2272 0.107459 GAGCCCTGAAGCTGGGTAAG 60.107 60.000 9.27 0.00 45.15 2.34
2237 2273 0.547712 AGAGCCCTGAAGCTGGGTAA 60.548 55.000 9.27 0.00 45.15 2.85
2238 2274 0.978146 GAGAGCCCTGAAGCTGGGTA 60.978 60.000 9.27 0.00 45.15 3.69
2239 2275 2.204059 AGAGCCCTGAAGCTGGGT 60.204 61.111 9.27 0.63 45.15 4.51
2240 2276 2.588989 GAGAGCCCTGAAGCTGGG 59.411 66.667 3.13 3.13 45.15 4.45
2241 2277 2.588989 GGAGAGCCCTGAAGCTGG 59.411 66.667 0.00 0.00 45.15 4.85
2242 2278 2.186384 CGGAGAGCCCTGAAGCTG 59.814 66.667 0.00 0.00 45.15 4.24
2244 2280 4.168291 CCCGGAGAGCCCTGAAGC 62.168 72.222 0.73 0.00 0.00 3.86
2245 2281 3.474570 CCCCGGAGAGCCCTGAAG 61.475 72.222 0.73 0.00 0.00 3.02
2246 2282 3.984186 CTCCCCGGAGAGCCCTGAA 62.984 68.421 0.73 0.00 44.53 3.02
2247 2283 4.465446 CTCCCCGGAGAGCCCTGA 62.465 72.222 0.73 0.00 44.53 3.86
2248 2284 4.465446 TCTCCCCGGAGAGCCCTG 62.465 72.222 8.37 0.00 45.26 4.45
2260 2296 3.515901 CAGTAGCAGGGGTATTATCTCCC 59.484 52.174 0.00 0.00 42.73 4.30
2261 2297 3.055747 GCAGTAGCAGGGGTATTATCTCC 60.056 52.174 0.00 0.00 41.58 3.71
2262 2298 3.835395 AGCAGTAGCAGGGGTATTATCTC 59.165 47.826 0.00 0.00 45.49 2.75
2263 2299 3.835395 GAGCAGTAGCAGGGGTATTATCT 59.165 47.826 0.00 0.00 45.49 1.98
2264 2300 3.835395 AGAGCAGTAGCAGGGGTATTATC 59.165 47.826 0.00 0.00 45.49 1.75
2265 2301 3.863086 AGAGCAGTAGCAGGGGTATTAT 58.137 45.455 0.00 0.00 45.49 1.28
2266 2302 3.330126 AGAGCAGTAGCAGGGGTATTA 57.670 47.619 0.00 0.00 45.49 0.98
2267 2303 2.182516 AGAGCAGTAGCAGGGGTATT 57.817 50.000 0.00 0.00 45.49 1.89
2268 2304 2.599677 GTAGAGCAGTAGCAGGGGTAT 58.400 52.381 0.00 0.00 45.49 2.73
2269 2305 1.749635 CGTAGAGCAGTAGCAGGGGTA 60.750 57.143 0.00 0.00 45.49 3.69
2270 2306 1.038130 CGTAGAGCAGTAGCAGGGGT 61.038 60.000 0.00 0.00 45.49 4.95
2271 2307 1.736586 CGTAGAGCAGTAGCAGGGG 59.263 63.158 0.00 0.00 45.49 4.79
2272 2308 1.736586 CCGTAGAGCAGTAGCAGGG 59.263 63.158 0.00 0.00 45.49 4.45
2273 2309 1.736586 CCCGTAGAGCAGTAGCAGG 59.263 63.158 0.00 0.00 45.49 4.85
2274 2310 1.038130 ACCCCGTAGAGCAGTAGCAG 61.038 60.000 0.00 0.00 45.49 4.24
2275 2311 1.000019 ACCCCGTAGAGCAGTAGCA 60.000 57.895 0.00 0.00 45.49 3.49
2276 2312 0.752376 AGACCCCGTAGAGCAGTAGC 60.752 60.000 0.00 0.00 42.56 3.58
2277 2313 1.310904 GAGACCCCGTAGAGCAGTAG 58.689 60.000 0.00 0.00 0.00 2.57
2278 2314 0.106819 GGAGACCCCGTAGAGCAGTA 60.107 60.000 0.00 0.00 0.00 2.74
2279 2315 1.380112 GGAGACCCCGTAGAGCAGT 60.380 63.158 0.00 0.00 0.00 4.40
2280 2316 1.379977 TGGAGACCCCGTAGAGCAG 60.380 63.158 0.00 0.00 37.93 4.24
2281 2317 1.681327 GTGGAGACCCCGTAGAGCA 60.681 63.158 0.00 0.00 37.93 4.26
2282 2318 1.043673 ATGTGGAGACCCCGTAGAGC 61.044 60.000 0.00 0.00 37.93 4.09
2283 2319 0.747255 CATGTGGAGACCCCGTAGAG 59.253 60.000 0.00 0.00 37.93 2.43
2284 2320 0.333652 TCATGTGGAGACCCCGTAGA 59.666 55.000 0.00 0.00 37.93 2.59
2285 2321 1.341531 GATCATGTGGAGACCCCGTAG 59.658 57.143 0.00 0.00 37.93 3.51
2286 2322 1.342574 TGATCATGTGGAGACCCCGTA 60.343 52.381 0.00 0.00 37.93 4.02
2287 2323 0.617535 TGATCATGTGGAGACCCCGT 60.618 55.000 0.00 0.00 37.93 5.28
2288 2324 0.179073 GTGATCATGTGGAGACCCCG 60.179 60.000 0.00 0.00 37.93 5.73
2289 2325 1.207791 AGTGATCATGTGGAGACCCC 58.792 55.000 0.00 0.00 0.00 4.95
2290 2326 3.244353 CCATAGTGATCATGTGGAGACCC 60.244 52.174 15.17 0.00 31.59 4.46
2291 2327 3.805108 GCCATAGTGATCATGTGGAGACC 60.805 52.174 21.33 6.09 31.59 3.85
2292 2328 3.181462 TGCCATAGTGATCATGTGGAGAC 60.181 47.826 21.33 9.32 31.59 3.36
2293 2329 3.040477 TGCCATAGTGATCATGTGGAGA 58.960 45.455 21.33 8.99 31.59 3.71
2294 2330 3.480505 TGCCATAGTGATCATGTGGAG 57.519 47.619 21.33 3.51 31.59 3.86
2295 2331 3.929955 TTGCCATAGTGATCATGTGGA 57.070 42.857 21.33 8.92 31.59 4.02
2296 2332 3.949754 ACTTTGCCATAGTGATCATGTGG 59.050 43.478 15.69 15.69 0.00 4.17
2297 2333 4.397103 ACACTTTGCCATAGTGATCATGTG 59.603 41.667 20.05 0.00 44.52 3.21
2298 2334 4.592942 ACACTTTGCCATAGTGATCATGT 58.407 39.130 20.05 0.00 44.52 3.21
2299 2335 5.571784 AACACTTTGCCATAGTGATCATG 57.428 39.130 20.05 0.00 44.52 3.07
2300 2336 6.658816 TGTAAACACTTTGCCATAGTGATCAT 59.341 34.615 20.05 7.06 44.52 2.45
2301 2337 6.000840 TGTAAACACTTTGCCATAGTGATCA 58.999 36.000 20.05 10.69 44.52 2.92
2302 2338 6.494893 TGTAAACACTTTGCCATAGTGATC 57.505 37.500 20.05 8.73 44.52 2.92
2303 2339 6.434028 ACATGTAAACACTTTGCCATAGTGAT 59.566 34.615 20.05 7.22 44.52 3.06
2304 2340 5.767665 ACATGTAAACACTTTGCCATAGTGA 59.232 36.000 20.05 0.00 44.52 3.41
2305 2341 6.012658 ACATGTAAACACTTTGCCATAGTG 57.987 37.500 12.90 12.90 46.56 2.74
2306 2342 6.374333 CCTACATGTAAACACTTTGCCATAGT 59.626 38.462 7.06 0.00 0.00 2.12
2307 2343 6.183360 CCCTACATGTAAACACTTTGCCATAG 60.183 42.308 7.06 0.00 0.00 2.23
2308 2344 5.650266 CCCTACATGTAAACACTTTGCCATA 59.350 40.000 7.06 0.00 0.00 2.74
2309 2345 4.462483 CCCTACATGTAAACACTTTGCCAT 59.538 41.667 7.06 0.00 0.00 4.40
2310 2346 3.823873 CCCTACATGTAAACACTTTGCCA 59.176 43.478 7.06 0.00 0.00 4.92
2311 2347 4.076394 TCCCTACATGTAAACACTTTGCC 58.924 43.478 7.06 0.00 0.00 4.52
2312 2348 5.393027 CCATCCCTACATGTAAACACTTTGC 60.393 44.000 7.06 0.00 0.00 3.68
2313 2349 5.393027 GCCATCCCTACATGTAAACACTTTG 60.393 44.000 7.06 0.00 0.00 2.77
2314 2350 4.705023 GCCATCCCTACATGTAAACACTTT 59.295 41.667 7.06 0.00 0.00 2.66
2315 2351 4.263727 TGCCATCCCTACATGTAAACACTT 60.264 41.667 7.06 0.00 0.00 3.16
2316 2352 3.265737 TGCCATCCCTACATGTAAACACT 59.734 43.478 7.06 0.00 0.00 3.55
2317 2353 3.616219 TGCCATCCCTACATGTAAACAC 58.384 45.455 7.06 0.00 0.00 3.32
2318 2354 4.308526 TTGCCATCCCTACATGTAAACA 57.691 40.909 7.06 0.00 0.00 2.83
2319 2355 5.852282 AATTGCCATCCCTACATGTAAAC 57.148 39.130 7.06 0.00 0.00 2.01
2320 2356 6.865834 AAAATTGCCATCCCTACATGTAAA 57.134 33.333 7.06 0.00 0.00 2.01
2321 2357 7.232534 GGATAAAATTGCCATCCCTACATGTAA 59.767 37.037 7.06 0.00 33.47 2.41
2322 2358 6.719370 GGATAAAATTGCCATCCCTACATGTA 59.281 38.462 5.25 5.25 33.47 2.29
2323 2359 5.539955 GGATAAAATTGCCATCCCTACATGT 59.460 40.000 2.69 2.69 33.47 3.21
2324 2360 5.539574 TGGATAAAATTGCCATCCCTACATG 59.460 40.000 9.56 0.00 37.95 3.21
2325 2361 5.714863 TGGATAAAATTGCCATCCCTACAT 58.285 37.500 9.56 0.00 37.95 2.29
2326 2362 5.136068 TGGATAAAATTGCCATCCCTACA 57.864 39.130 9.56 0.00 37.95 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.