Multiple sequence alignment - TraesCS1A01G110600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G110600 chr1A 100.000 2401 0 0 1 2401 110161326 110158926 0.000000e+00 4434.0
1 TraesCS1A01G110600 chr1A 100.000 171 0 0 1686 1856 110159471 110159301 1.390000e-82 316.0
2 TraesCS1A01G110600 chr1A 100.000 171 0 0 1856 2026 110159641 110159471 1.390000e-82 316.0
3 TraesCS1A01G110600 chr1B 90.549 1111 69 16 755 1858 159162159 159163240 0.000000e+00 1437.0
4 TraesCS1A01G110600 chr1B 88.073 327 35 4 111 434 159157063 159157388 3.740000e-103 385.0
5 TraesCS1A01G110600 chr1B 94.583 240 8 3 2127 2366 159163559 159163793 1.360000e-97 366.0
6 TraesCS1A01G110600 chr1B 89.037 301 24 4 442 733 661438698 661438998 4.880000e-97 364.0
7 TraesCS1A01G110600 chr1B 91.630 227 16 2 1882 2107 159163094 159163318 6.450000e-81 311.0
8 TraesCS1A01G110600 chr1B 88.559 236 24 2 111 345 159159287 159159520 1.410000e-72 283.0
9 TraesCS1A01G110600 chr1B 92.647 68 3 2 363 430 159160008 159160073 1.960000e-16 97.1
10 TraesCS1A01G110600 chr5D 90.501 758 59 6 750 1496 324779536 324780291 0.000000e+00 989.0
11 TraesCS1A01G110600 chr5D 86.339 183 12 7 1541 1712 324782028 324782208 1.130000e-43 187.0
12 TraesCS1A01G110600 chr5B 89.186 786 67 7 728 1496 377207422 377208206 0.000000e+00 965.0
13 TraesCS1A01G110600 chr5B 87.908 306 28 4 442 738 594097711 594098016 3.800000e-93 351.0
14 TraesCS1A01G110600 chr5B 94.595 74 3 1 367 440 377207369 377207441 1.950000e-21 113.0
15 TraesCS1A01G110600 chr5A 88.933 759 54 15 758 1496 423030159 423030907 0.000000e+00 909.0
16 TraesCS1A01G110600 chr5A 92.208 77 2 3 367 440 423030002 423030077 3.260000e-19 106.0
17 TraesCS1A01G110600 chr1D 91.803 549 21 6 1283 1823 107598766 107598234 0.000000e+00 743.0
18 TraesCS1A01G110600 chr1D 90.597 553 38 8 750 1296 107614679 107614135 0.000000e+00 721.0
19 TraesCS1A01G110600 chr1D 90.859 361 18 7 2042 2401 107598234 107597888 1.000000e-128 470.0
20 TraesCS1A01G110600 chr1D 91.698 265 19 3 168 429 107615128 107614864 4.880000e-97 364.0
21 TraesCS1A01G110600 chr1D 93.103 116 4 2 1882 1993 107598349 107598234 1.480000e-37 167.0
22 TraesCS1A01G110600 chr1D 90.625 96 8 1 52 147 107615206 107615112 2.510000e-25 126.0
23 TraesCS1A01G110600 chr3A 79.659 703 103 26 880 1545 601537570 601536871 1.000000e-128 470.0
24 TraesCS1A01G110600 chr3B 77.589 647 117 20 885 1519 607415766 607416396 1.360000e-97 366.0
25 TraesCS1A01G110600 chr3B 88.197 305 27 4 442 737 131077089 131077393 2.940000e-94 355.0
26 TraesCS1A01G110600 chr6B 88.487 304 25 5 442 735 423232810 423232507 2.270000e-95 359.0
27 TraesCS1A01G110600 chr6B 88.411 302 24 7 442 733 675395934 675396234 1.060000e-93 353.0
28 TraesCS1A01G110600 chr7B 88.667 300 24 4 442 733 584223790 584224087 8.160000e-95 357.0
29 TraesCS1A01G110600 chr7B 88.119 303 27 4 442 735 704665365 704665667 3.800000e-93 351.0
30 TraesCS1A01G110600 chr7B 87.869 305 29 3 441 737 738731094 738731398 3.800000e-93 351.0
31 TraesCS1A01G110600 chr6A 76.912 680 123 24 888 1539 8010894 8010221 2.940000e-94 355.0
32 TraesCS1A01G110600 chr2B 88.411 302 25 5 442 734 132133883 132134183 2.940000e-94 355.0
33 TraesCS1A01G110600 chr6D 76.023 684 126 26 888 1539 7747906 7747229 1.070000e-83 320.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G110600 chr1A 110158926 110161326 2400 True 1688.666667 4434 100.000000 1 2401 3 chr1A.!!$R1 2400
1 TraesCS1A01G110600 chr1B 159157063 159163793 6730 False 479.850000 1437 91.006833 111 2366 6 chr1B.!!$F2 2255
2 TraesCS1A01G110600 chr5D 324779536 324782208 2672 False 588.000000 989 88.420000 750 1712 2 chr5D.!!$F1 962
3 TraesCS1A01G110600 chr5B 377207369 377208206 837 False 539.000000 965 91.890500 367 1496 2 chr5B.!!$F2 1129
4 TraesCS1A01G110600 chr5A 423030002 423030907 905 False 507.500000 909 90.570500 367 1496 2 chr5A.!!$F1 1129
5 TraesCS1A01G110600 chr1D 107597888 107598766 878 True 460.000000 743 91.921667 1283 2401 3 chr1D.!!$R1 1118
6 TraesCS1A01G110600 chr1D 107614135 107615206 1071 True 403.666667 721 90.973333 52 1296 3 chr1D.!!$R2 1244
7 TraesCS1A01G110600 chr3A 601536871 601537570 699 True 470.000000 470 79.659000 880 1545 1 chr3A.!!$R1 665
8 TraesCS1A01G110600 chr3B 607415766 607416396 630 False 366.000000 366 77.589000 885 1519 1 chr3B.!!$F2 634
9 TraesCS1A01G110600 chr6A 8010221 8010894 673 True 355.000000 355 76.912000 888 1539 1 chr6A.!!$R1 651
10 TraesCS1A01G110600 chr6D 7747229 7747906 677 True 320.000000 320 76.023000 888 1539 1 chr6D.!!$R1 651

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
250 252 0.0293 CCCGTGTCAAGTTTGCACAG 59.971 55.0 14.86 7.46 36.03 3.66 F
707 714 0.1023 TGCACGTGTATATGAGCGCT 59.898 50.0 11.27 11.27 32.85 5.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1392 6250 0.247301 GCGCAACAGCACTAATCGAC 60.247 55.0 0.3 0.0 37.05 4.20 R
1624 8180 0.976641 CTGTTCTGGGTAGGAGCACA 59.023 55.0 0.0 0.0 0.00 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 0.942252 GTTGTGGAAACTGGACGTCC 59.058 55.000 28.17 28.17 0.00 4.79
20 21 0.542333 TTGTGGAAACTGGACGTCCA 59.458 50.000 34.13 34.13 45.30 4.02
30 31 1.100510 TGGACGTCCAGACTAATCCG 58.899 55.000 33.23 0.00 42.01 4.18
31 32 0.248949 GGACGTCCAGACTAATCCGC 60.249 60.000 29.75 0.00 35.64 5.54
32 33 0.454600 GACGTCCAGACTAATCCGCA 59.545 55.000 3.51 0.00 0.00 5.69
33 34 1.067212 GACGTCCAGACTAATCCGCAT 59.933 52.381 3.51 0.00 0.00 4.73
34 35 1.202417 ACGTCCAGACTAATCCGCATG 60.202 52.381 0.00 0.00 0.00 4.06
35 36 1.869754 CGTCCAGACTAATCCGCATGG 60.870 57.143 0.00 0.00 0.00 3.66
36 37 1.139058 GTCCAGACTAATCCGCATGGT 59.861 52.381 0.00 0.00 36.30 3.55
37 38 1.837439 TCCAGACTAATCCGCATGGTT 59.163 47.619 0.00 0.00 36.30 3.67
38 39 2.158957 TCCAGACTAATCCGCATGGTTC 60.159 50.000 0.00 0.00 36.30 3.62
39 40 1.860950 CAGACTAATCCGCATGGTTCG 59.139 52.381 0.00 0.00 36.30 3.95
40 41 1.754803 AGACTAATCCGCATGGTTCGA 59.245 47.619 0.00 0.00 36.30 3.71
41 42 2.167693 AGACTAATCCGCATGGTTCGAA 59.832 45.455 0.00 0.00 36.30 3.71
42 43 3.131396 GACTAATCCGCATGGTTCGAAT 58.869 45.455 0.00 0.00 36.30 3.34
43 44 3.131396 ACTAATCCGCATGGTTCGAATC 58.869 45.455 0.00 0.00 36.30 2.52
44 45 2.332063 AATCCGCATGGTTCGAATCT 57.668 45.000 10.29 0.00 36.30 2.40
45 46 3.469008 AATCCGCATGGTTCGAATCTA 57.531 42.857 10.29 0.00 36.30 1.98
46 47 3.685139 ATCCGCATGGTTCGAATCTAT 57.315 42.857 10.29 0.70 36.30 1.98
47 48 4.801330 ATCCGCATGGTTCGAATCTATA 57.199 40.909 10.29 0.00 36.30 1.31
48 49 3.909430 TCCGCATGGTTCGAATCTATAC 58.091 45.455 10.29 0.00 36.30 1.47
49 50 3.319689 TCCGCATGGTTCGAATCTATACA 59.680 43.478 10.29 0.00 36.30 2.29
50 51 3.675225 CCGCATGGTTCGAATCTATACAG 59.325 47.826 10.29 0.00 0.00 2.74
64 65 5.587388 TCTATACAGGTGTTTAAGGTCCG 57.413 43.478 0.00 0.00 0.00 4.79
66 67 0.470766 ACAGGTGTTTAAGGTCCGCA 59.529 50.000 0.00 0.00 0.00 5.69
78 79 4.424711 TCCGCATTGGAGGTGCCC 62.425 66.667 0.00 0.00 43.74 5.36
88 89 2.840511 TGGAGGTGCCCTTAGACAATA 58.159 47.619 0.00 0.00 31.76 1.90
89 90 2.504175 TGGAGGTGCCCTTAGACAATAC 59.496 50.000 0.00 0.00 31.76 1.89
90 91 2.772515 GGAGGTGCCCTTAGACAATACT 59.227 50.000 0.00 0.00 31.76 2.12
142 143 6.127814 ACTGCTATTGAATCACATGAACTTGG 60.128 38.462 0.00 0.00 0.00 3.61
154 155 5.516339 CACATGAACTTGGAGTTGTGTTTTC 59.484 40.000 0.00 0.00 38.80 2.29
156 157 5.560966 TGAACTTGGAGTTGTGTTTTCTC 57.439 39.130 0.00 0.00 38.80 2.87
163 164 5.167845 TGGAGTTGTGTTTTCTCTTTTTGC 58.832 37.500 0.00 0.00 0.00 3.68
166 167 3.859411 TGTGTTTTCTCTTTTTGCGGT 57.141 38.095 0.00 0.00 0.00 5.68
167 168 4.181309 TGTGTTTTCTCTTTTTGCGGTT 57.819 36.364 0.00 0.00 0.00 4.44
168 169 4.170256 TGTGTTTTCTCTTTTTGCGGTTC 58.830 39.130 0.00 0.00 0.00 3.62
226 228 1.071385 GGCTCATCATGGATTCGAGGT 59.929 52.381 0.00 0.00 0.00 3.85
240 242 1.070786 GAGGTCTTGCCCGTGTCAA 59.929 57.895 0.00 0.00 38.26 3.18
250 252 0.029300 CCCGTGTCAAGTTTGCACAG 59.971 55.000 14.86 7.46 36.03 3.66
254 256 1.135141 GTGTCAAGTTTGCACAGCCAA 60.135 47.619 11.73 0.00 36.18 4.52
255 257 1.547820 TGTCAAGTTTGCACAGCCAAA 59.452 42.857 0.00 0.00 32.66 3.28
291 293 1.601903 CTTGGCAAGCGTAGACAACAA 59.398 47.619 15.25 0.00 0.00 2.83
300 302 5.751243 AGCGTAGACAACAAAAACTGAAT 57.249 34.783 0.00 0.00 0.00 2.57
346 348 5.299279 CGTTTATTTCTATCCAGGCAACCAT 59.701 40.000 0.00 0.00 37.17 3.55
365 369 7.462571 AACCATAATAGTCTGGGTGAAAAAC 57.537 36.000 0.00 0.00 36.82 2.43
417 421 0.734889 ATTTCCTTGCATTCGCCTCG 59.265 50.000 0.00 0.00 37.32 4.63
429 436 6.655062 TGCATTCGCCTCGTAAATAAAATAG 58.345 36.000 0.00 0.00 37.32 1.73
436 443 6.364435 CGCCTCGTAAATAAAATAGTAGGTCC 59.636 42.308 0.00 0.00 0.00 4.46
437 444 6.648310 GCCTCGTAAATAAAATAGTAGGTCCC 59.352 42.308 0.00 0.00 0.00 4.46
439 446 7.015974 CCTCGTAAATAAAATAGTAGGTCCCCT 59.984 40.741 0.00 0.00 37.71 4.79
440 447 8.322905 TCGTAAATAAAATAGTAGGTCCCCTT 57.677 34.615 0.00 0.00 34.61 3.95
441 448 8.206189 TCGTAAATAAAATAGTAGGTCCCCTTG 58.794 37.037 0.00 0.00 34.61 3.61
443 450 9.910267 GTAAATAAAATAGTAGGTCCCCTTGAA 57.090 33.333 0.00 0.00 34.61 2.69
444 451 8.818622 AAATAAAATAGTAGGTCCCCTTGAAC 57.181 34.615 0.00 0.00 34.61 3.18
445 452 4.857130 AAATAGTAGGTCCCCTTGAACC 57.143 45.455 0.00 0.00 34.61 3.62
446 453 3.502051 ATAGTAGGTCCCCTTGAACCA 57.498 47.619 0.00 0.00 34.61 3.67
447 454 2.127651 AGTAGGTCCCCTTGAACCAA 57.872 50.000 0.00 0.00 34.61 3.67
448 455 2.644151 AGTAGGTCCCCTTGAACCAAT 58.356 47.619 0.00 0.00 34.61 3.16
449 456 2.576648 AGTAGGTCCCCTTGAACCAATC 59.423 50.000 0.00 0.00 34.61 2.67
450 457 1.760405 AGGTCCCCTTGAACCAATCT 58.240 50.000 0.00 0.00 0.00 2.40
451 458 1.355720 AGGTCCCCTTGAACCAATCTG 59.644 52.381 0.00 0.00 0.00 2.90
452 459 1.075536 GGTCCCCTTGAACCAATCTGT 59.924 52.381 0.00 0.00 0.00 3.41
453 460 2.162681 GTCCCCTTGAACCAATCTGTG 58.837 52.381 0.00 0.00 0.00 3.66
470 477 5.762179 TCTGTGGTTGGATGATTAGAACT 57.238 39.130 0.00 0.00 0.00 3.01
471 478 5.491070 TCTGTGGTTGGATGATTAGAACTG 58.509 41.667 0.00 0.00 0.00 3.16
472 479 5.013079 TCTGTGGTTGGATGATTAGAACTGT 59.987 40.000 0.00 0.00 0.00 3.55
473 480 5.003160 TGTGGTTGGATGATTAGAACTGTG 58.997 41.667 0.00 0.00 0.00 3.66
474 481 4.396166 GTGGTTGGATGATTAGAACTGTGG 59.604 45.833 0.00 0.00 0.00 4.17
475 482 4.042809 TGGTTGGATGATTAGAACTGTGGT 59.957 41.667 0.00 0.00 0.00 4.16
478 485 6.483640 GGTTGGATGATTAGAACTGTGGTATC 59.516 42.308 0.00 0.00 0.00 2.24
479 486 6.174720 TGGATGATTAGAACTGTGGTATCC 57.825 41.667 0.00 0.00 33.81 2.59
480 487 5.071788 TGGATGATTAGAACTGTGGTATCCC 59.928 44.000 0.00 0.00 32.56 3.85
481 488 5.071788 GGATGATTAGAACTGTGGTATCCCA 59.928 44.000 0.00 0.00 38.87 4.37
483 490 3.906720 TTAGAACTGTGGTATCCCAGC 57.093 47.619 0.00 0.00 42.94 4.85
484 491 0.912486 AGAACTGTGGTATCCCAGCC 59.088 55.000 0.00 0.00 42.94 4.85
485 492 0.107165 GAACTGTGGTATCCCAGCCC 60.107 60.000 0.00 0.00 42.94 5.19
486 493 0.844661 AACTGTGGTATCCCAGCCCA 60.845 55.000 0.00 0.00 42.94 5.36
488 495 2.270874 CTGTGGTATCCCAGCCCACC 62.271 65.000 5.66 0.00 46.49 4.61
489 496 2.126142 TGGTATCCCAGCCCACCA 59.874 61.111 0.00 0.00 38.72 4.17
490 497 2.000701 TGGTATCCCAGCCCACCAG 61.001 63.158 0.00 0.00 36.15 4.00
491 498 2.757124 GGTATCCCAGCCCACCAGG 61.757 68.421 0.00 0.00 39.47 4.45
509 516 3.087370 AGGGTTTAAATCCTGGTGCTC 57.913 47.619 19.53 0.00 38.36 4.26
511 518 1.132453 GGTTTAAATCCTGGTGCTCGC 59.868 52.381 0.00 0.00 0.00 5.03
513 520 2.418368 TTAAATCCTGGTGCTCGCAT 57.582 45.000 0.00 0.00 0.00 4.73
514 521 2.418368 TAAATCCTGGTGCTCGCATT 57.582 45.000 0.00 0.00 0.00 3.56
515 522 1.549203 AAATCCTGGTGCTCGCATTT 58.451 45.000 0.00 0.00 0.00 2.32
516 523 1.549203 AATCCTGGTGCTCGCATTTT 58.451 45.000 0.00 0.00 0.00 1.82
517 524 1.549203 ATCCTGGTGCTCGCATTTTT 58.451 45.000 0.00 0.00 0.00 1.94
518 525 0.881118 TCCTGGTGCTCGCATTTTTC 59.119 50.000 0.00 0.00 0.00 2.29
519 526 0.109132 CCTGGTGCTCGCATTTTTCC 60.109 55.000 0.00 0.00 0.00 3.13
520 527 0.883833 CTGGTGCTCGCATTTTTCCT 59.116 50.000 0.00 0.00 0.00 3.36
521 528 0.597568 TGGTGCTCGCATTTTTCCTG 59.402 50.000 0.00 0.00 0.00 3.86
522 529 0.109132 GGTGCTCGCATTTTTCCTGG 60.109 55.000 0.00 0.00 0.00 4.45
523 530 0.881118 GTGCTCGCATTTTTCCTGGA 59.119 50.000 0.00 0.00 0.00 3.86
524 531 1.474077 GTGCTCGCATTTTTCCTGGAT 59.526 47.619 0.00 0.00 0.00 3.41
525 532 2.094545 GTGCTCGCATTTTTCCTGGATT 60.095 45.455 0.00 0.00 0.00 3.01
526 533 2.562298 TGCTCGCATTTTTCCTGGATTT 59.438 40.909 0.00 0.00 0.00 2.17
527 534 3.761218 TGCTCGCATTTTTCCTGGATTTA 59.239 39.130 0.00 0.00 0.00 1.40
528 535 4.402155 TGCTCGCATTTTTCCTGGATTTAT 59.598 37.500 0.00 0.00 0.00 1.40
529 536 5.105392 TGCTCGCATTTTTCCTGGATTTATT 60.105 36.000 0.00 0.00 0.00 1.40
530 537 5.812127 GCTCGCATTTTTCCTGGATTTATTT 59.188 36.000 0.00 0.00 0.00 1.40
531 538 6.019559 GCTCGCATTTTTCCTGGATTTATTTC 60.020 38.462 0.00 0.00 0.00 2.17
532 539 6.929625 TCGCATTTTTCCTGGATTTATTTCA 58.070 32.000 0.00 0.00 0.00 2.69
533 540 7.035004 TCGCATTTTTCCTGGATTTATTTCAG 58.965 34.615 0.00 0.00 0.00 3.02
534 541 6.256321 CGCATTTTTCCTGGATTTATTTCAGG 59.744 38.462 0.00 0.00 46.91 3.86
542 549 6.076981 CTGGATTTATTTCAGGATTTCCGG 57.923 41.667 0.00 0.00 42.08 5.14
543 550 5.515106 TGGATTTATTTCAGGATTTCCGGT 58.485 37.500 0.00 0.00 42.08 5.28
544 551 5.359576 TGGATTTATTTCAGGATTTCCGGTG 59.640 40.000 0.00 0.00 42.08 4.94
545 552 5.592688 GGATTTATTTCAGGATTTCCGGTGA 59.407 40.000 0.00 0.00 42.08 4.02
546 553 6.265422 GGATTTATTTCAGGATTTCCGGTGAT 59.735 38.462 0.00 0.00 42.08 3.06
547 554 6.449635 TTTATTTCAGGATTTCCGGTGATG 57.550 37.500 0.00 0.00 42.08 3.07
548 555 1.750193 TTCAGGATTTCCGGTGATGC 58.250 50.000 0.00 2.01 42.08 3.91
549 556 0.461870 TCAGGATTTCCGGTGATGCG 60.462 55.000 0.00 0.00 42.08 4.73
550 557 1.819632 AGGATTTCCGGTGATGCGC 60.820 57.895 0.00 0.00 42.08 6.09
551 558 2.112198 GGATTTCCGGTGATGCGCA 61.112 57.895 14.96 14.96 0.00 6.09
552 559 1.447317 GGATTTCCGGTGATGCGCAT 61.447 55.000 25.66 25.66 0.00 4.73
553 560 0.381801 GATTTCCGGTGATGCGCATT 59.618 50.000 26.12 8.31 0.00 3.56
554 561 0.381801 ATTTCCGGTGATGCGCATTC 59.618 50.000 26.12 19.54 0.00 2.67
555 562 0.957888 TTTCCGGTGATGCGCATTCA 60.958 50.000 26.12 19.83 0.00 2.57
556 563 1.368345 TTCCGGTGATGCGCATTCAG 61.368 55.000 26.12 19.44 0.00 3.02
557 564 2.108514 CCGGTGATGCGCATTCAGT 61.109 57.895 26.12 0.98 0.00 3.41
558 565 1.061411 CGGTGATGCGCATTCAGTG 59.939 57.895 26.12 13.82 0.00 3.66
559 566 1.360931 CGGTGATGCGCATTCAGTGA 61.361 55.000 26.12 0.00 0.00 3.41
560 567 0.376152 GGTGATGCGCATTCAGTGAG 59.624 55.000 26.12 0.00 0.00 3.51
561 568 1.362768 GTGATGCGCATTCAGTGAGA 58.637 50.000 26.12 0.00 0.00 3.27
562 569 1.326852 GTGATGCGCATTCAGTGAGAG 59.673 52.381 26.12 0.00 0.00 3.20
563 570 0.935898 GATGCGCATTCAGTGAGAGG 59.064 55.000 26.12 0.00 0.00 3.69
564 571 0.538584 ATGCGCATTCAGTGAGAGGA 59.461 50.000 19.28 0.00 0.00 3.71
565 572 0.108472 TGCGCATTCAGTGAGAGGAG 60.108 55.000 5.66 0.00 0.00 3.69
566 573 0.174389 GCGCATTCAGTGAGAGGAGA 59.826 55.000 0.30 0.00 0.00 3.71
567 574 1.919918 CGCATTCAGTGAGAGGAGAC 58.080 55.000 0.00 0.00 0.00 3.36
568 575 1.796982 CGCATTCAGTGAGAGGAGACG 60.797 57.143 0.00 0.00 0.00 4.18
569 576 1.203523 GCATTCAGTGAGAGGAGACGT 59.796 52.381 0.00 0.00 0.00 4.34
570 577 2.353208 GCATTCAGTGAGAGGAGACGTT 60.353 50.000 0.00 0.00 0.00 3.99
571 578 3.506810 CATTCAGTGAGAGGAGACGTTC 58.493 50.000 0.00 0.00 0.00 3.95
593 600 4.603946 GGATGACGGGGCGCCTAC 62.604 72.222 28.56 18.75 0.00 3.18
594 601 3.537874 GATGACGGGGCGCCTACT 61.538 66.667 28.56 8.34 0.00 2.57
595 602 3.792053 GATGACGGGGCGCCTACTG 62.792 68.421 28.56 18.27 0.00 2.74
597 604 4.814294 GACGGGGCGCCTACTGTG 62.814 72.222 28.56 12.12 0.00 3.66
599 606 4.814294 CGGGGCGCCTACTGTGAC 62.814 72.222 28.56 6.44 0.00 3.67
600 607 3.391382 GGGGCGCCTACTGTGACT 61.391 66.667 28.56 0.00 31.13 3.41
601 608 2.663196 GGGCGCCTACTGTGACTT 59.337 61.111 28.56 0.00 31.13 3.01
603 610 1.805945 GGCGCCTACTGTGACTTCG 60.806 63.158 22.15 0.00 0.00 3.79
605 612 0.169672 GCGCCTACTGTGACTTCGTA 59.830 55.000 0.00 0.00 0.00 3.43
614 621 6.528423 CCTACTGTGACTTCGTAAATCTCAAG 59.472 42.308 0.00 0.00 0.00 3.02
615 622 6.085555 ACTGTGACTTCGTAAATCTCAAGA 57.914 37.500 0.00 0.00 0.00 3.02
619 626 9.307121 CTGTGACTTCGTAAATCTCAAGATAAT 57.693 33.333 0.00 0.00 33.73 1.28
627 634 7.541091 TCGTAAATCTCAAGATAATATGTCGGC 59.459 37.037 0.00 0.00 33.73 5.54
628 635 7.542477 CGTAAATCTCAAGATAATATGTCGGCT 59.458 37.037 0.00 0.00 33.73 5.52
629 636 7.897575 AAATCTCAAGATAATATGTCGGCTC 57.102 36.000 0.00 0.00 33.73 4.70
630 637 6.596309 ATCTCAAGATAATATGTCGGCTCA 57.404 37.500 0.00 0.00 32.01 4.26
631 638 6.018589 TCTCAAGATAATATGTCGGCTCAG 57.981 41.667 0.00 0.00 0.00 3.35
632 639 5.536538 TCTCAAGATAATATGTCGGCTCAGT 59.463 40.000 0.00 0.00 0.00 3.41
633 640 5.773575 TCAAGATAATATGTCGGCTCAGTC 58.226 41.667 0.00 0.00 0.00 3.51
634 641 5.536538 TCAAGATAATATGTCGGCTCAGTCT 59.463 40.000 0.00 0.00 0.00 3.24
637 644 6.451393 AGATAATATGTCGGCTCAGTCTTTC 58.549 40.000 0.00 0.00 0.00 2.62
641 648 1.270826 TGTCGGCTCAGTCTTTCAGAG 59.729 52.381 0.00 0.00 33.62 3.35
642 649 0.891373 TCGGCTCAGTCTTTCAGAGG 59.109 55.000 0.00 0.00 31.57 3.69
646 653 1.001860 GCTCAGTCTTTCAGAGGTGCT 59.998 52.381 0.00 0.00 31.57 4.40
647 654 2.930455 GCTCAGTCTTTCAGAGGTGCTC 60.930 54.545 0.00 0.00 31.57 4.26
648 655 2.298446 CTCAGTCTTTCAGAGGTGCTCA 59.702 50.000 0.00 0.00 32.06 4.26
649 656 2.902486 TCAGTCTTTCAGAGGTGCTCAT 59.098 45.455 0.00 0.00 32.06 2.90
650 657 4.089361 TCAGTCTTTCAGAGGTGCTCATA 58.911 43.478 0.00 0.00 32.06 2.15
652 659 4.869297 CAGTCTTTCAGAGGTGCTCATAAG 59.131 45.833 0.00 0.00 32.06 1.73
654 661 5.105392 AGTCTTTCAGAGGTGCTCATAAGAG 60.105 44.000 0.00 0.00 44.96 2.85
655 662 4.774726 TCTTTCAGAGGTGCTCATAAGAGT 59.225 41.667 0.00 0.00 44.00 3.24
656 663 5.952347 TCTTTCAGAGGTGCTCATAAGAGTA 59.048 40.000 0.00 0.00 44.00 2.59
657 664 5.843673 TTCAGAGGTGCTCATAAGAGTAG 57.156 43.478 0.00 0.00 44.00 2.57
658 665 4.211125 TCAGAGGTGCTCATAAGAGTAGG 58.789 47.826 0.00 0.00 44.00 3.18
659 666 3.320541 CAGAGGTGCTCATAAGAGTAGGG 59.679 52.174 0.00 0.00 44.00 3.53
660 667 3.052490 AGAGGTGCTCATAAGAGTAGGGT 60.052 47.826 0.00 0.00 44.00 4.34
661 668 4.168283 AGAGGTGCTCATAAGAGTAGGGTA 59.832 45.833 0.00 0.00 44.00 3.69
662 669 5.081032 GAGGTGCTCATAAGAGTAGGGTAT 58.919 45.833 0.00 0.00 44.00 2.73
663 670 4.835615 AGGTGCTCATAAGAGTAGGGTATG 59.164 45.833 0.00 0.00 44.00 2.39
664 671 4.589374 GGTGCTCATAAGAGTAGGGTATGT 59.411 45.833 0.00 0.00 44.00 2.29
666 673 5.069251 GTGCTCATAAGAGTAGGGTATGTGT 59.931 44.000 0.00 0.00 44.00 3.72
667 674 5.069119 TGCTCATAAGAGTAGGGTATGTGTG 59.931 44.000 0.00 0.00 44.00 3.82
668 675 5.531122 TCATAAGAGTAGGGTATGTGTGC 57.469 43.478 0.00 0.00 0.00 4.57
669 676 2.961526 AAGAGTAGGGTATGTGTGCG 57.038 50.000 0.00 0.00 0.00 5.34
670 677 1.848652 AGAGTAGGGTATGTGTGCGT 58.151 50.000 0.00 0.00 0.00 5.24
671 678 2.176889 AGAGTAGGGTATGTGTGCGTT 58.823 47.619 0.00 0.00 0.00 4.84
672 679 2.165845 AGAGTAGGGTATGTGTGCGTTC 59.834 50.000 0.00 0.00 0.00 3.95
673 680 1.897133 AGTAGGGTATGTGTGCGTTCA 59.103 47.619 0.00 0.00 0.00 3.18
676 683 2.901249 AGGGTATGTGTGCGTTCATAC 58.099 47.619 13.09 13.09 42.97 2.39
690 697 3.425525 CGTTCATACGGATGAGTGTATGC 59.574 47.826 10.87 0.00 44.76 3.14
691 698 4.368315 GTTCATACGGATGAGTGTATGCA 58.632 43.478 10.87 0.00 44.76 3.96
692 699 3.977427 TCATACGGATGAGTGTATGCAC 58.023 45.455 6.12 5.71 44.76 4.57
704 711 4.631133 GTGTATGCACGTGTATATGAGC 57.369 45.455 25.81 15.09 35.75 4.26
705 712 3.119628 GTGTATGCACGTGTATATGAGCG 59.880 47.826 25.81 0.00 35.75 5.03
706 713 1.139989 ATGCACGTGTATATGAGCGC 58.860 50.000 18.03 0.00 32.85 5.92
707 714 0.102300 TGCACGTGTATATGAGCGCT 59.898 50.000 11.27 11.27 32.85 5.92
708 715 1.209128 GCACGTGTATATGAGCGCTT 58.791 50.000 13.26 0.00 0.00 4.68
709 716 2.223618 TGCACGTGTATATGAGCGCTTA 60.224 45.455 13.26 8.30 32.85 3.09
710 717 2.987149 GCACGTGTATATGAGCGCTTAT 59.013 45.455 19.33 19.33 0.00 1.73
711 718 3.181540 GCACGTGTATATGAGCGCTTATG 60.182 47.826 23.64 8.93 0.00 1.90
712 719 3.981416 CACGTGTATATGAGCGCTTATGT 59.019 43.478 23.64 19.44 0.00 2.29
713 720 4.444388 CACGTGTATATGAGCGCTTATGTT 59.556 41.667 23.64 13.54 0.00 2.71
714 721 5.047847 ACGTGTATATGAGCGCTTATGTTT 58.952 37.500 23.64 11.24 0.00 2.83
715 722 6.143278 CACGTGTATATGAGCGCTTATGTTTA 59.857 38.462 23.64 10.33 0.00 2.01
716 723 6.866770 ACGTGTATATGAGCGCTTATGTTTAT 59.133 34.615 23.64 11.93 0.00 1.40
717 724 8.024865 ACGTGTATATGAGCGCTTATGTTTATA 58.975 33.333 23.64 10.97 0.00 0.98
718 725 8.311822 CGTGTATATGAGCGCTTATGTTTATAC 58.688 37.037 23.64 20.72 0.00 1.47
719 726 8.592998 GTGTATATGAGCGCTTATGTTTATACC 58.407 37.037 23.64 12.71 0.00 2.73
720 727 6.887376 ATATGAGCGCTTATGTTTATACCG 57.113 37.500 23.64 0.00 0.00 4.02
721 728 4.310357 TGAGCGCTTATGTTTATACCGA 57.690 40.909 13.26 0.00 0.00 4.69
722 729 4.878439 TGAGCGCTTATGTTTATACCGAT 58.122 39.130 13.26 0.00 0.00 4.18
723 730 4.684242 TGAGCGCTTATGTTTATACCGATG 59.316 41.667 13.26 0.00 0.00 3.84
724 731 3.994392 AGCGCTTATGTTTATACCGATGG 59.006 43.478 2.64 0.00 0.00 3.51
725 732 3.744426 GCGCTTATGTTTATACCGATGGT 59.256 43.478 0.00 0.00 40.16 3.55
726 733 4.143179 GCGCTTATGTTTATACCGATGGTC 60.143 45.833 0.00 0.00 37.09 4.02
727 734 4.986034 CGCTTATGTTTATACCGATGGTCA 59.014 41.667 0.00 0.00 37.09 4.02
728 735 5.464057 CGCTTATGTTTATACCGATGGTCAA 59.536 40.000 0.00 0.00 37.09 3.18
729 736 6.018588 CGCTTATGTTTATACCGATGGTCAAA 60.019 38.462 0.00 0.00 37.09 2.69
730 737 7.466185 CGCTTATGTTTATACCGATGGTCAAAA 60.466 37.037 0.00 0.00 37.09 2.44
731 738 8.185505 GCTTATGTTTATACCGATGGTCAAAAA 58.814 33.333 0.00 0.00 37.09 1.94
923 5724 4.590918 TCACCCTCTCTCTATATAAGCGG 58.409 47.826 0.00 0.00 0.00 5.52
943 5746 3.654414 GGCTATACAAGGACCGAGATTG 58.346 50.000 0.00 0.00 0.00 2.67
981 5784 8.021955 GCACAAAGCAAAGAAATAAGCTATTT 57.978 30.769 0.00 0.00 44.79 1.40
1023 5826 2.664851 CCCAAGAGCAACGCGACA 60.665 61.111 15.93 0.00 0.00 4.35
1105 5908 1.266891 GCTACGCACGCACAAGTAATC 60.267 52.381 0.00 0.00 0.00 1.75
1175 5992 4.222124 AGAGTTTGGATCGGTATTTGCT 57.778 40.909 0.00 0.00 0.00 3.91
1392 6250 1.661341 GACTGGAGCCTACTGCAATG 58.339 55.000 0.00 0.00 44.39 2.82
1398 6256 2.555199 GAGCCTACTGCAATGTCGATT 58.445 47.619 0.00 0.00 44.83 3.34
1439 6297 3.461061 TGATGCTTCTATTCTTGCTCGG 58.539 45.455 0.88 0.00 0.00 4.63
1459 6323 6.701145 TCGGGCAATAATTTTATTACAGCA 57.299 33.333 0.00 0.00 32.39 4.41
1522 7293 3.124466 TGAGATTTTTACGTCATGCGGTG 59.876 43.478 12.85 0.00 46.52 4.94
1592 8148 9.425577 TCACAAATATCTTCACATAAACGTGTA 57.574 29.630 0.00 0.00 38.12 2.90
1600 8156 8.821147 TCTTCACATAAACGTGTATGTTTACT 57.179 30.769 25.56 4.48 44.51 2.24
1610 8166 7.642071 ACGTGTATGTTTACTTGTTTATCGT 57.358 32.000 0.00 0.00 0.00 3.73
1624 8180 9.601217 ACTTGTTTATCGTATATGCTCTTCTTT 57.399 29.630 0.00 0.00 0.00 2.52
1716 8283 7.286215 AGATTGAGAAAAGATATGCATTGGG 57.714 36.000 3.54 0.00 0.00 4.12
1717 8284 7.064866 AGATTGAGAAAAGATATGCATTGGGA 58.935 34.615 3.54 0.00 0.00 4.37
1718 8285 7.562454 AGATTGAGAAAAGATATGCATTGGGAA 59.438 33.333 3.54 0.00 0.00 3.97
1719 8286 7.479352 TTGAGAAAAGATATGCATTGGGAAA 57.521 32.000 3.54 0.00 0.00 3.13
1720 8287 7.104043 TGAGAAAAGATATGCATTGGGAAAG 57.896 36.000 3.54 0.00 0.00 2.62
1721 8288 6.891361 TGAGAAAAGATATGCATTGGGAAAGA 59.109 34.615 3.54 0.00 0.00 2.52
1722 8289 7.562454 TGAGAAAAGATATGCATTGGGAAAGAT 59.438 33.333 3.54 0.00 0.00 2.40
1723 8290 9.071276 GAGAAAAGATATGCATTGGGAAAGATA 57.929 33.333 3.54 0.00 0.00 1.98
1724 8291 9.597681 AGAAAAGATATGCATTGGGAAAGATAT 57.402 29.630 3.54 0.00 0.00 1.63
1725 8292 9.635520 GAAAAGATATGCATTGGGAAAGATATG 57.364 33.333 3.54 0.00 0.00 1.78
1726 8293 6.770746 AGATATGCATTGGGAAAGATATGC 57.229 37.500 3.54 0.00 42.75 3.14
1732 8299 4.801581 GCATTGGGAAAGATATGCATTGGG 60.802 45.833 3.54 0.00 42.18 4.12
1810 8380 7.102993 TCAAGATGGTCTCATGAAAACGATTA 58.897 34.615 0.00 0.00 32.98 1.75
1839 8409 5.813383 ACACATGAAGATCAGACCATCTTT 58.187 37.500 0.00 0.00 42.20 2.52
1850 8420 2.907042 AGACCATCTTTTCTCTCGGGTT 59.093 45.455 0.00 0.00 0.00 4.11
1851 8421 4.081642 CAGACCATCTTTTCTCTCGGGTTA 60.082 45.833 0.00 0.00 0.00 2.85
1852 8422 4.530946 AGACCATCTTTTCTCTCGGGTTAA 59.469 41.667 0.00 0.00 0.00 2.01
1853 8423 5.012768 AGACCATCTTTTCTCTCGGGTTAAA 59.987 40.000 0.00 0.00 0.00 1.52
1854 8424 5.627135 ACCATCTTTTCTCTCGGGTTAAAA 58.373 37.500 0.00 0.00 0.00 1.52
1855 8425 6.066032 ACCATCTTTTCTCTCGGGTTAAAAA 58.934 36.000 0.57 0.00 0.00 1.94
1886 8456 7.286215 AGATTGAGAAAAGATATGCATTGGG 57.714 36.000 3.54 0.00 0.00 4.12
1887 8457 7.064866 AGATTGAGAAAAGATATGCATTGGGA 58.935 34.615 3.54 0.00 0.00 4.37
1888 8458 7.562454 AGATTGAGAAAAGATATGCATTGGGAA 59.438 33.333 3.54 0.00 0.00 3.97
1889 8459 7.479352 TTGAGAAAAGATATGCATTGGGAAA 57.521 32.000 3.54 0.00 0.00 3.13
1890 8460 7.104043 TGAGAAAAGATATGCATTGGGAAAG 57.896 36.000 3.54 0.00 0.00 2.62
1891 8461 6.891361 TGAGAAAAGATATGCATTGGGAAAGA 59.109 34.615 3.54 0.00 0.00 2.52
1892 8462 7.562454 TGAGAAAAGATATGCATTGGGAAAGAT 59.438 33.333 3.54 0.00 0.00 2.40
1893 8463 9.071276 GAGAAAAGATATGCATTGGGAAAGATA 57.929 33.333 3.54 0.00 0.00 1.98
1894 8464 9.597681 AGAAAAGATATGCATTGGGAAAGATAT 57.402 29.630 3.54 0.00 0.00 1.63
1895 8465 9.635520 GAAAAGATATGCATTGGGAAAGATATG 57.364 33.333 3.54 0.00 0.00 1.78
1896 8466 6.770746 AGATATGCATTGGGAAAGATATGC 57.229 37.500 3.54 0.00 42.75 3.14
1900 8470 4.951254 TGCATTGGGAAAGATATGCATTG 58.049 39.130 3.54 0.00 45.92 2.82
1901 8471 4.202274 TGCATTGGGAAAGATATGCATTGG 60.202 41.667 3.54 0.00 45.92 3.16
1902 8472 4.801581 GCATTGGGAAAGATATGCATTGGG 60.802 45.833 3.54 0.00 42.18 4.12
1903 8473 3.969466 TGGGAAAGATATGCATTGGGA 57.031 42.857 3.54 0.00 0.00 4.37
1904 8474 4.262891 TGGGAAAGATATGCATTGGGAA 57.737 40.909 3.54 0.00 0.00 3.97
1905 8475 4.818447 TGGGAAAGATATGCATTGGGAAT 58.182 39.130 3.54 0.00 0.00 3.01
1906 8476 5.963092 TGGGAAAGATATGCATTGGGAATA 58.037 37.500 3.54 0.00 0.00 1.75
1907 8477 6.012113 TGGGAAAGATATGCATTGGGAATAG 58.988 40.000 3.54 0.00 0.00 1.73
1908 8478 5.420104 GGGAAAGATATGCATTGGGAATAGG 59.580 44.000 3.54 0.00 0.00 2.57
1909 8479 6.012745 GGAAAGATATGCATTGGGAATAGGT 58.987 40.000 3.54 0.00 0.00 3.08
1910 8480 6.494835 GGAAAGATATGCATTGGGAATAGGTT 59.505 38.462 3.54 0.00 0.00 3.50
1911 8481 7.309438 GGAAAGATATGCATTGGGAATAGGTTC 60.309 40.741 3.54 0.00 0.00 3.62
1929 8499 6.538209 AGGTTCCTCCTAGAGATCATAAGA 57.462 41.667 0.00 0.00 46.10 2.10
1930 8500 6.928202 AGGTTCCTCCTAGAGATCATAAGAA 58.072 40.000 0.00 0.00 46.10 2.52
1931 8501 6.780522 AGGTTCCTCCTAGAGATCATAAGAAC 59.219 42.308 0.00 0.00 46.10 3.01
1932 8502 6.551601 GGTTCCTCCTAGAGATCATAAGAACA 59.448 42.308 0.00 0.00 33.32 3.18
1933 8503 7.255801 GGTTCCTCCTAGAGATCATAAGAACAG 60.256 44.444 0.00 0.00 33.32 3.16
1934 8504 6.916909 TCCTCCTAGAGATCATAAGAACAGT 58.083 40.000 0.00 0.00 0.00 3.55
1935 8505 8.046867 TCCTCCTAGAGATCATAAGAACAGTA 57.953 38.462 0.00 0.00 0.00 2.74
1936 8506 8.160765 TCCTCCTAGAGATCATAAGAACAGTAG 58.839 40.741 0.00 0.00 0.00 2.57
1937 8507 7.393234 CCTCCTAGAGATCATAAGAACAGTAGG 59.607 44.444 0.00 0.00 31.21 3.18
1938 8508 8.046867 TCCTAGAGATCATAAGAACAGTAGGA 57.953 38.462 0.00 0.00 34.11 2.94
1939 8509 7.940137 TCCTAGAGATCATAAGAACAGTAGGAC 59.060 40.741 0.00 0.00 32.82 3.85
1940 8510 6.969993 AGAGATCATAAGAACAGTAGGACC 57.030 41.667 0.00 0.00 0.00 4.46
1941 8511 6.436027 AGAGATCATAAGAACAGTAGGACCA 58.564 40.000 0.00 0.00 0.00 4.02
1942 8512 6.549364 AGAGATCATAAGAACAGTAGGACCAG 59.451 42.308 0.00 0.00 0.00 4.00
1943 8513 5.600484 AGATCATAAGAACAGTAGGACCAGG 59.400 44.000 0.00 0.00 0.00 4.45
1944 8514 4.684724 TCATAAGAACAGTAGGACCAGGT 58.315 43.478 0.00 0.00 0.00 4.00
1945 8515 5.834460 TCATAAGAACAGTAGGACCAGGTA 58.166 41.667 0.00 0.00 0.00 3.08
1946 8516 6.441222 TCATAAGAACAGTAGGACCAGGTAT 58.559 40.000 0.00 0.00 0.00 2.73
1947 8517 6.550108 TCATAAGAACAGTAGGACCAGGTATC 59.450 42.308 0.00 0.00 0.00 2.24
1948 8518 4.332683 AGAACAGTAGGACCAGGTATCA 57.667 45.455 0.00 0.00 0.00 2.15
1949 8519 4.684724 AGAACAGTAGGACCAGGTATCAA 58.315 43.478 0.00 0.00 0.00 2.57
1950 8520 5.091552 AGAACAGTAGGACCAGGTATCAAA 58.908 41.667 0.00 0.00 0.00 2.69
1951 8521 5.726793 AGAACAGTAGGACCAGGTATCAAAT 59.273 40.000 0.00 0.00 0.00 2.32
1952 8522 6.901300 AGAACAGTAGGACCAGGTATCAAATA 59.099 38.462 0.00 0.00 0.00 1.40
1953 8523 7.402071 AGAACAGTAGGACCAGGTATCAAATAA 59.598 37.037 0.00 0.00 0.00 1.40
1954 8524 7.504926 ACAGTAGGACCAGGTATCAAATAAA 57.495 36.000 0.00 0.00 0.00 1.40
1955 8525 8.102484 ACAGTAGGACCAGGTATCAAATAAAT 57.898 34.615 0.00 0.00 0.00 1.40
1956 8526 8.211629 ACAGTAGGACCAGGTATCAAATAAATC 58.788 37.037 0.00 0.00 0.00 2.17
1957 8527 8.210946 CAGTAGGACCAGGTATCAAATAAATCA 58.789 37.037 0.00 0.00 0.00 2.57
1958 8528 8.778059 AGTAGGACCAGGTATCAAATAAATCAA 58.222 33.333 0.00 0.00 0.00 2.57
1959 8529 9.057089 GTAGGACCAGGTATCAAATAAATCAAG 57.943 37.037 0.00 0.00 0.00 3.02
1960 8530 7.872138 AGGACCAGGTATCAAATAAATCAAGA 58.128 34.615 0.00 0.00 0.00 3.02
1961 8531 8.506083 AGGACCAGGTATCAAATAAATCAAGAT 58.494 33.333 0.00 0.00 0.00 2.40
1962 8532 8.571336 GGACCAGGTATCAAATAAATCAAGATG 58.429 37.037 0.00 0.00 0.00 2.90
1963 8533 8.469309 ACCAGGTATCAAATAAATCAAGATGG 57.531 34.615 0.00 0.00 0.00 3.51
1964 8534 8.061304 ACCAGGTATCAAATAAATCAAGATGGT 58.939 33.333 0.00 0.00 0.00 3.55
1965 8535 8.571336 CCAGGTATCAAATAAATCAAGATGGTC 58.429 37.037 0.00 0.00 0.00 4.02
1966 8536 9.347240 CAGGTATCAAATAAATCAAGATGGTCT 57.653 33.333 0.00 0.00 0.00 3.85
1967 8537 9.566432 AGGTATCAAATAAATCAAGATGGTCTC 57.434 33.333 0.00 0.00 0.00 3.36
1968 8538 9.342308 GGTATCAAATAAATCAAGATGGTCTCA 57.658 33.333 0.00 0.00 0.00 3.27
1971 8541 9.636789 ATCAAATAAATCAAGATGGTCTCATGA 57.363 29.630 0.00 0.00 36.14 3.07
1972 8542 9.465199 TCAAATAAATCAAGATGGTCTCATGAA 57.535 29.630 0.00 0.00 35.39 2.57
1976 8546 5.808042 ATCAAGATGGTCTCATGAAAACG 57.192 39.130 0.00 0.00 35.39 3.60
1977 8547 4.893608 TCAAGATGGTCTCATGAAAACGA 58.106 39.130 0.00 0.00 32.98 3.85
1978 8548 5.491070 TCAAGATGGTCTCATGAAAACGAT 58.509 37.500 0.00 1.00 32.98 3.73
1979 8549 5.939883 TCAAGATGGTCTCATGAAAACGATT 59.060 36.000 0.00 0.00 32.98 3.34
1980 8550 7.102993 TCAAGATGGTCTCATGAAAACGATTA 58.897 34.615 0.00 0.00 32.98 1.75
1981 8551 7.770433 TCAAGATGGTCTCATGAAAACGATTAT 59.230 33.333 0.00 0.00 32.98 1.28
1982 8552 9.045223 CAAGATGGTCTCATGAAAACGATTATA 57.955 33.333 0.00 0.00 32.98 0.98
1983 8553 9.613428 AAGATGGTCTCATGAAAACGATTATAA 57.387 29.630 0.00 0.00 32.98 0.98
1984 8554 9.613428 AGATGGTCTCATGAAAACGATTATAAA 57.387 29.630 0.00 0.00 32.98 1.40
1987 8557 9.834628 TGGTCTCATGAAAACGATTATAAAAAC 57.165 29.630 0.00 0.00 0.00 2.43
1988 8558 9.834628 GGTCTCATGAAAACGATTATAAAAACA 57.165 29.630 0.00 0.00 0.00 2.83
2004 8574 9.513906 TTATAAAAACACATGAAGATCAGACCA 57.486 29.630 0.00 0.00 0.00 4.02
2005 8575 6.906157 AAAAACACATGAAGATCAGACCAT 57.094 33.333 0.00 0.00 0.00 3.55
2006 8576 6.506500 AAAACACATGAAGATCAGACCATC 57.493 37.500 0.00 0.00 0.00 3.51
2007 8577 5.432680 AACACATGAAGATCAGACCATCT 57.567 39.130 0.00 0.00 34.34 2.90
2008 8578 5.432680 ACACATGAAGATCAGACCATCTT 57.567 39.130 0.00 0.00 44.37 2.40
2009 8579 5.813383 ACACATGAAGATCAGACCATCTTT 58.187 37.500 0.00 0.00 42.20 2.52
2010 8580 6.243900 ACACATGAAGATCAGACCATCTTTT 58.756 36.000 0.00 0.00 42.20 2.27
2011 8581 6.373774 ACACATGAAGATCAGACCATCTTTTC 59.626 38.462 0.00 0.00 42.20 2.29
2012 8582 6.598457 CACATGAAGATCAGACCATCTTTTCT 59.402 38.462 0.00 0.00 42.20 2.52
2013 8583 6.822676 ACATGAAGATCAGACCATCTTTTCTC 59.177 38.462 0.00 0.00 42.20 2.87
2014 8584 6.617782 TGAAGATCAGACCATCTTTTCTCT 57.382 37.500 0.00 0.00 42.20 3.10
2015 8585 6.638610 TGAAGATCAGACCATCTTTTCTCTC 58.361 40.000 0.00 0.00 42.20 3.20
2016 8586 5.261209 AGATCAGACCATCTTTTCTCTCG 57.739 43.478 0.00 0.00 27.71 4.04
2017 8587 3.876274 TCAGACCATCTTTTCTCTCGG 57.124 47.619 0.00 0.00 0.00 4.63
2018 8588 2.497675 TCAGACCATCTTTTCTCTCGGG 59.502 50.000 0.00 0.00 0.00 5.14
2019 8589 2.234908 CAGACCATCTTTTCTCTCGGGT 59.765 50.000 0.00 0.00 0.00 5.28
2020 8590 2.907042 AGACCATCTTTTCTCTCGGGTT 59.093 45.455 0.00 0.00 0.00 4.11
2029 8599 5.469084 TCTTTTCTCTCGGGTTAAAAAGCTC 59.531 40.000 11.90 0.00 37.04 4.09
2033 8603 2.635915 TCTCGGGTTAAAAAGCTCTCCA 59.364 45.455 0.00 0.00 0.00 3.86
2107 8677 6.899393 ACTGAACTTGGAATTGCAATCTTA 57.101 33.333 13.38 0.00 0.00 2.10
2112 8682 5.025453 ACTTGGAATTGCAATCTTACCCAT 58.975 37.500 13.38 0.00 0.00 4.00
2166 8957 9.220767 GACATGAAAAGTCCTGAAGTTATTACT 57.779 33.333 0.00 0.00 35.68 2.24
2223 9014 3.648528 CGATCCACTCGCTTGATGA 57.351 52.632 0.00 0.00 41.14 2.92
2354 9147 0.609406 GACTTGGGGCTTCCTGTTCC 60.609 60.000 0.00 0.00 36.20 3.62
2366 9159 4.451900 CTTCCTGTTCCAGTTAGTGTTGT 58.548 43.478 0.00 0.00 0.00 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.942252 GGACGTCCAGTTTCCACAAC 59.058 55.000 29.75 0.00 35.64 3.32
11 12 1.100510 CGGATTAGTCTGGACGTCCA 58.899 55.000 34.13 34.13 45.30 4.02
12 13 0.248949 GCGGATTAGTCTGGACGTCC 60.249 60.000 28.17 28.17 36.20 4.79
13 14 0.454600 TGCGGATTAGTCTGGACGTC 59.545 55.000 7.13 7.13 36.20 4.34
14 15 1.112113 ATGCGGATTAGTCTGGACGT 58.888 50.000 0.00 0.00 33.59 4.34
15 16 1.491670 CATGCGGATTAGTCTGGACG 58.508 55.000 0.00 0.00 33.59 4.79
16 17 1.139058 ACCATGCGGATTAGTCTGGAC 59.861 52.381 0.00 0.00 33.59 4.02
17 18 1.496060 ACCATGCGGATTAGTCTGGA 58.504 50.000 0.00 0.00 35.40 3.86
18 19 2.213499 GAACCATGCGGATTAGTCTGG 58.787 52.381 0.00 0.00 35.59 3.86
19 20 1.860950 CGAACCATGCGGATTAGTCTG 59.139 52.381 0.00 0.00 35.59 3.51
20 21 1.754803 TCGAACCATGCGGATTAGTCT 59.245 47.619 0.00 0.00 35.59 3.24
21 22 2.218953 TCGAACCATGCGGATTAGTC 57.781 50.000 0.00 0.00 35.59 2.59
22 23 2.684001 TTCGAACCATGCGGATTAGT 57.316 45.000 0.00 0.00 35.59 2.24
23 24 3.393800 AGATTCGAACCATGCGGATTAG 58.606 45.455 0.00 0.00 35.59 1.73
24 25 3.469008 AGATTCGAACCATGCGGATTA 57.531 42.857 0.00 0.00 35.59 1.75
25 26 2.332063 AGATTCGAACCATGCGGATT 57.668 45.000 0.00 0.00 35.59 3.01
26 27 3.685139 ATAGATTCGAACCATGCGGAT 57.315 42.857 0.00 0.00 35.59 4.18
27 28 3.319689 TGTATAGATTCGAACCATGCGGA 59.680 43.478 0.00 0.00 35.59 5.54
28 29 3.649073 TGTATAGATTCGAACCATGCGG 58.351 45.455 0.00 0.00 38.77 5.69
29 30 3.675225 CCTGTATAGATTCGAACCATGCG 59.325 47.826 0.00 0.00 0.00 4.73
30 31 4.449068 CACCTGTATAGATTCGAACCATGC 59.551 45.833 0.00 0.00 0.00 4.06
31 32 5.601662 ACACCTGTATAGATTCGAACCATG 58.398 41.667 0.00 0.00 0.00 3.66
32 33 5.871396 ACACCTGTATAGATTCGAACCAT 57.129 39.130 0.00 0.00 0.00 3.55
33 34 5.670792 AACACCTGTATAGATTCGAACCA 57.329 39.130 0.00 0.00 0.00 3.67
34 35 7.224167 CCTTAAACACCTGTATAGATTCGAACC 59.776 40.741 0.00 0.00 0.00 3.62
35 36 7.763071 ACCTTAAACACCTGTATAGATTCGAAC 59.237 37.037 0.00 0.00 0.00 3.95
36 37 7.844009 ACCTTAAACACCTGTATAGATTCGAA 58.156 34.615 0.00 0.00 0.00 3.71
37 38 7.414222 ACCTTAAACACCTGTATAGATTCGA 57.586 36.000 0.00 0.00 0.00 3.71
38 39 6.700520 GGACCTTAAACACCTGTATAGATTCG 59.299 42.308 0.00 0.00 0.00 3.34
39 40 6.700520 CGGACCTTAAACACCTGTATAGATTC 59.299 42.308 0.00 0.00 0.00 2.52
40 41 6.579865 CGGACCTTAAACACCTGTATAGATT 58.420 40.000 0.00 0.00 0.00 2.40
41 42 5.452917 GCGGACCTTAAACACCTGTATAGAT 60.453 44.000 0.00 0.00 0.00 1.98
42 43 4.142093 GCGGACCTTAAACACCTGTATAGA 60.142 45.833 0.00 0.00 0.00 1.98
43 44 4.117685 GCGGACCTTAAACACCTGTATAG 58.882 47.826 0.00 0.00 0.00 1.31
44 45 3.514706 TGCGGACCTTAAACACCTGTATA 59.485 43.478 0.00 0.00 0.00 1.47
45 46 2.303600 TGCGGACCTTAAACACCTGTAT 59.696 45.455 0.00 0.00 0.00 2.29
46 47 1.693062 TGCGGACCTTAAACACCTGTA 59.307 47.619 0.00 0.00 0.00 2.74
47 48 0.470766 TGCGGACCTTAAACACCTGT 59.529 50.000 0.00 0.00 0.00 4.00
48 49 1.821216 ATGCGGACCTTAAACACCTG 58.179 50.000 0.00 0.00 0.00 4.00
49 50 2.159382 CAATGCGGACCTTAAACACCT 58.841 47.619 0.00 0.00 0.00 4.00
50 51 1.201414 CCAATGCGGACCTTAAACACC 59.799 52.381 0.00 0.00 36.56 4.16
73 74 8.520351 ACAAATAAAAGTATTGTCTAAGGGCAC 58.480 33.333 0.00 0.00 30.04 5.01
142 143 4.265320 CCGCAAAAAGAGAAAACACAACTC 59.735 41.667 0.00 0.00 0.00 3.01
154 155 5.519722 AGTTTATGTGAACCGCAAAAAGAG 58.480 37.500 0.00 0.00 0.00 2.85
156 157 5.518487 ACAAGTTTATGTGAACCGCAAAAAG 59.482 36.000 0.00 0.00 30.82 2.27
226 228 1.021202 CAAACTTGACACGGGCAAGA 58.979 50.000 22.86 0.00 44.16 3.02
240 242 6.940831 ATAAAAATTTTGGCTGTGCAAACT 57.059 29.167 3.73 0.00 0.00 2.66
250 252 7.584108 CCAAGTGAAGGAATAAAAATTTTGGC 58.416 34.615 3.73 0.00 0.00 4.52
254 256 7.041167 GCTTGCCAAGTGAAGGAATAAAAATTT 60.041 33.333 6.28 0.00 0.00 1.82
255 257 6.427853 GCTTGCCAAGTGAAGGAATAAAAATT 59.572 34.615 6.28 0.00 0.00 1.82
314 316 7.065443 GCCTGGATAGAAATAAACGTGTTAGTT 59.935 37.037 0.00 0.00 35.59 2.24
318 320 5.250200 TGCCTGGATAGAAATAAACGTGTT 58.750 37.500 0.00 0.00 0.00 3.32
333 335 4.202503 CCAGACTATTATGGTTGCCTGGAT 60.203 45.833 8.55 0.00 41.68 3.41
365 369 8.111836 CGTTTTGATGCATCTTTGGAATTATTG 58.888 33.333 26.32 1.32 0.00 1.90
445 452 6.600822 AGTTCTAATCATCCAACCACAGATTG 59.399 38.462 0.00 0.00 31.89 2.67
446 453 6.600822 CAGTTCTAATCATCCAACCACAGATT 59.399 38.462 0.00 0.00 33.82 2.40
447 454 6.118170 CAGTTCTAATCATCCAACCACAGAT 58.882 40.000 0.00 0.00 0.00 2.90
448 455 5.013079 ACAGTTCTAATCATCCAACCACAGA 59.987 40.000 0.00 0.00 0.00 3.41
449 456 5.122869 CACAGTTCTAATCATCCAACCACAG 59.877 44.000 0.00 0.00 0.00 3.66
450 457 5.003160 CACAGTTCTAATCATCCAACCACA 58.997 41.667 0.00 0.00 0.00 4.17
451 458 4.396166 CCACAGTTCTAATCATCCAACCAC 59.604 45.833 0.00 0.00 0.00 4.16
452 459 4.042809 ACCACAGTTCTAATCATCCAACCA 59.957 41.667 0.00 0.00 0.00 3.67
453 460 4.589908 ACCACAGTTCTAATCATCCAACC 58.410 43.478 0.00 0.00 0.00 3.77
455 462 6.591935 GGATACCACAGTTCTAATCATCCAA 58.408 40.000 0.00 0.00 31.67 3.53
474 481 2.919043 CCTGGTGGGCTGGGATAC 59.081 66.667 0.00 0.00 0.00 2.24
489 496 2.618045 CGAGCACCAGGATTTAAACCCT 60.618 50.000 0.00 0.00 0.00 4.34
490 497 1.743394 CGAGCACCAGGATTTAAACCC 59.257 52.381 0.00 0.00 0.00 4.11
491 498 1.132453 GCGAGCACCAGGATTTAAACC 59.868 52.381 0.00 0.00 0.00 3.27
492 499 1.810151 TGCGAGCACCAGGATTTAAAC 59.190 47.619 0.00 0.00 0.00 2.01
493 500 2.192664 TGCGAGCACCAGGATTTAAA 57.807 45.000 0.00 0.00 0.00 1.52
494 501 2.418368 ATGCGAGCACCAGGATTTAA 57.582 45.000 0.00 0.00 0.00 1.52
495 502 2.418368 AATGCGAGCACCAGGATTTA 57.582 45.000 0.00 0.00 0.00 1.40
498 505 1.474077 GAAAAATGCGAGCACCAGGAT 59.526 47.619 0.00 0.00 0.00 3.24
499 506 0.881118 GAAAAATGCGAGCACCAGGA 59.119 50.000 0.00 0.00 0.00 3.86
500 507 0.109132 GGAAAAATGCGAGCACCAGG 60.109 55.000 0.00 0.00 0.00 4.45
502 509 0.597568 CAGGAAAAATGCGAGCACCA 59.402 50.000 0.00 0.00 0.00 4.17
503 510 0.109132 CCAGGAAAAATGCGAGCACC 60.109 55.000 0.00 0.00 0.00 5.01
504 511 0.881118 TCCAGGAAAAATGCGAGCAC 59.119 50.000 0.00 0.00 0.00 4.40
505 512 1.838112 ATCCAGGAAAAATGCGAGCA 58.162 45.000 0.00 0.00 0.00 4.26
506 513 2.947448 AATCCAGGAAAAATGCGAGC 57.053 45.000 0.00 0.00 0.00 5.03
507 514 7.035004 TGAAATAAATCCAGGAAAAATGCGAG 58.965 34.615 0.00 0.00 0.00 5.03
508 515 6.929625 TGAAATAAATCCAGGAAAAATGCGA 58.070 32.000 0.00 0.00 0.00 5.10
509 516 7.225523 CTGAAATAAATCCAGGAAAAATGCG 57.774 36.000 0.00 0.00 0.00 4.73
518 525 5.010012 CCGGAAATCCTGAAATAAATCCAGG 59.990 44.000 0.00 0.00 46.64 4.45
519 526 5.594317 ACCGGAAATCCTGAAATAAATCCAG 59.406 40.000 9.46 0.00 0.00 3.86
520 527 5.359576 CACCGGAAATCCTGAAATAAATCCA 59.640 40.000 9.46 0.00 0.00 3.41
521 528 5.592688 TCACCGGAAATCCTGAAATAAATCC 59.407 40.000 9.46 0.00 0.00 3.01
522 529 6.693315 TCACCGGAAATCCTGAAATAAATC 57.307 37.500 9.46 0.00 0.00 2.17
523 530 6.461509 GCATCACCGGAAATCCTGAAATAAAT 60.462 38.462 9.46 0.00 0.00 1.40
524 531 5.163561 GCATCACCGGAAATCCTGAAATAAA 60.164 40.000 9.46 0.00 0.00 1.40
525 532 4.338118 GCATCACCGGAAATCCTGAAATAA 59.662 41.667 9.46 0.00 0.00 1.40
526 533 3.882888 GCATCACCGGAAATCCTGAAATA 59.117 43.478 9.46 0.00 0.00 1.40
527 534 2.689983 GCATCACCGGAAATCCTGAAAT 59.310 45.455 9.46 0.00 0.00 2.17
528 535 2.091541 GCATCACCGGAAATCCTGAAA 58.908 47.619 9.46 0.00 0.00 2.69
529 536 1.750193 GCATCACCGGAAATCCTGAA 58.250 50.000 9.46 0.00 0.00 3.02
530 537 0.461870 CGCATCACCGGAAATCCTGA 60.462 55.000 9.46 0.00 0.00 3.86
531 538 2.016961 CGCATCACCGGAAATCCTG 58.983 57.895 9.46 0.00 0.00 3.86
532 539 1.819632 GCGCATCACCGGAAATCCT 60.820 57.895 9.46 0.00 0.00 3.24
533 540 1.447317 ATGCGCATCACCGGAAATCC 61.447 55.000 19.28 0.00 30.90 3.01
534 541 0.381801 AATGCGCATCACCGGAAATC 59.618 50.000 25.53 0.00 30.90 2.17
535 542 0.381801 GAATGCGCATCACCGGAAAT 59.618 50.000 25.53 3.87 30.90 2.17
536 543 0.957888 TGAATGCGCATCACCGGAAA 60.958 50.000 25.53 2.10 30.90 3.13
537 544 1.368345 CTGAATGCGCATCACCGGAA 61.368 55.000 25.53 4.46 30.90 4.30
538 545 1.815003 CTGAATGCGCATCACCGGA 60.815 57.895 25.53 4.80 0.00 5.14
539 546 2.108514 ACTGAATGCGCATCACCGG 61.109 57.895 25.53 21.21 0.00 5.28
540 547 1.061411 CACTGAATGCGCATCACCG 59.939 57.895 25.53 18.28 0.00 4.94
541 548 0.376152 CTCACTGAATGCGCATCACC 59.624 55.000 25.53 16.03 0.00 4.02
542 549 1.326852 CTCTCACTGAATGCGCATCAC 59.673 52.381 25.53 20.34 0.00 3.06
543 550 1.648504 CTCTCACTGAATGCGCATCA 58.351 50.000 25.53 20.60 0.00 3.07
544 551 0.935898 CCTCTCACTGAATGCGCATC 59.064 55.000 25.53 17.12 0.00 3.91
545 552 0.538584 TCCTCTCACTGAATGCGCAT 59.461 50.000 19.28 19.28 0.00 4.73
546 553 0.108472 CTCCTCTCACTGAATGCGCA 60.108 55.000 14.96 14.96 0.00 6.09
547 554 0.174389 TCTCCTCTCACTGAATGCGC 59.826 55.000 0.00 0.00 0.00 6.09
548 555 1.796982 CGTCTCCTCTCACTGAATGCG 60.797 57.143 0.00 0.00 0.00 4.73
549 556 1.203523 ACGTCTCCTCTCACTGAATGC 59.796 52.381 0.00 0.00 0.00 3.56
550 557 3.506810 GAACGTCTCCTCTCACTGAATG 58.493 50.000 0.00 0.00 0.00 2.67
551 558 2.494073 GGAACGTCTCCTCTCACTGAAT 59.506 50.000 8.87 0.00 41.61 2.57
552 559 1.887198 GGAACGTCTCCTCTCACTGAA 59.113 52.381 8.87 0.00 41.61 3.02
553 560 1.535833 GGAACGTCTCCTCTCACTGA 58.464 55.000 8.87 0.00 41.61 3.41
554 561 0.528470 GGGAACGTCTCCTCTCACTG 59.472 60.000 13.94 0.00 44.68 3.66
555 562 2.964343 GGGAACGTCTCCTCTCACT 58.036 57.895 13.94 0.00 44.68 3.41
576 583 4.603946 GTAGGCGCCCCGTCATCC 62.604 72.222 26.15 0.00 32.13 3.51
577 584 3.537874 AGTAGGCGCCCCGTCATC 61.538 66.667 26.15 5.89 32.13 2.92
578 585 3.849951 CAGTAGGCGCCCCGTCAT 61.850 66.667 26.15 5.68 32.13 3.06
580 587 4.814294 CACAGTAGGCGCCCCGTC 62.814 72.222 26.15 11.31 35.76 4.79
582 589 4.814294 GTCACAGTAGGCGCCCCG 62.814 72.222 26.15 11.90 35.76 5.73
583 590 2.854187 GAAGTCACAGTAGGCGCCCC 62.854 65.000 26.15 14.99 0.00 5.80
584 591 1.448013 GAAGTCACAGTAGGCGCCC 60.448 63.158 26.15 9.10 0.00 6.13
585 592 1.805945 CGAAGTCACAGTAGGCGCC 60.806 63.158 21.89 21.89 0.00 6.53
586 593 0.169672 TACGAAGTCACAGTAGGCGC 59.830 55.000 0.00 0.00 43.93 6.53
587 594 2.624316 TTACGAAGTCACAGTAGGCG 57.376 50.000 0.00 0.00 43.93 5.52
588 595 4.745649 AGATTTACGAAGTCACAGTAGGC 58.254 43.478 0.00 0.00 43.93 3.93
589 596 5.950883 TGAGATTTACGAAGTCACAGTAGG 58.049 41.667 0.00 0.00 43.93 3.18
590 597 7.306213 TCTTGAGATTTACGAAGTCACAGTAG 58.694 38.462 0.00 0.00 43.93 2.57
591 598 7.210718 TCTTGAGATTTACGAAGTCACAGTA 57.789 36.000 0.00 0.00 43.93 2.74
592 599 6.085555 TCTTGAGATTTACGAAGTCACAGT 57.914 37.500 0.00 0.00 43.93 3.55
593 600 8.689251 TTATCTTGAGATTTACGAAGTCACAG 57.311 34.615 0.00 0.00 37.74 3.66
600 607 9.406828 CCGACATATTATCTTGAGATTTACGAA 57.593 33.333 0.00 0.00 36.05 3.85
601 608 7.541091 GCCGACATATTATCTTGAGATTTACGA 59.459 37.037 0.00 0.00 36.05 3.43
603 610 8.764524 AGCCGACATATTATCTTGAGATTTAC 57.235 34.615 0.00 0.00 36.05 2.01
605 612 7.445121 TGAGCCGACATATTATCTTGAGATTT 58.555 34.615 0.00 0.00 36.05 2.17
614 621 6.216569 TGAAAGACTGAGCCGACATATTATC 58.783 40.000 0.00 0.00 0.00 1.75
615 622 6.040955 TCTGAAAGACTGAGCCGACATATTAT 59.959 38.462 0.00 0.00 38.67 1.28
619 626 3.089284 TCTGAAAGACTGAGCCGACATA 58.911 45.455 0.00 0.00 38.67 2.29
622 629 1.403514 CCTCTGAAAGACTGAGCCGAC 60.404 57.143 0.00 0.00 38.67 4.79
623 630 0.891373 CCTCTGAAAGACTGAGCCGA 59.109 55.000 0.00 0.00 38.67 5.54
624 631 0.605589 ACCTCTGAAAGACTGAGCCG 59.394 55.000 0.00 0.00 38.67 5.52
625 632 1.943507 GCACCTCTGAAAGACTGAGCC 60.944 57.143 0.00 0.00 38.67 4.70
627 634 2.298446 TGAGCACCTCTGAAAGACTGAG 59.702 50.000 0.00 0.00 38.67 3.35
628 635 2.319844 TGAGCACCTCTGAAAGACTGA 58.680 47.619 0.00 0.00 38.67 3.41
629 636 2.827800 TGAGCACCTCTGAAAGACTG 57.172 50.000 0.00 0.00 38.67 3.51
630 637 4.774726 TCTTATGAGCACCTCTGAAAGACT 59.225 41.667 0.00 0.00 38.67 3.24
631 638 5.078411 TCTTATGAGCACCTCTGAAAGAC 57.922 43.478 0.00 0.00 38.67 3.01
632 639 4.774726 ACTCTTATGAGCACCTCTGAAAGA 59.225 41.667 5.57 0.00 43.85 2.52
633 640 5.083533 ACTCTTATGAGCACCTCTGAAAG 57.916 43.478 5.57 0.00 43.85 2.62
634 641 5.127845 CCTACTCTTATGAGCACCTCTGAAA 59.872 44.000 5.57 0.00 43.85 2.69
637 644 3.320541 CCCTACTCTTATGAGCACCTCTG 59.679 52.174 5.57 0.00 43.85 3.35
641 648 4.589374 ACATACCCTACTCTTATGAGCACC 59.411 45.833 5.57 0.00 43.85 5.01
642 649 5.069251 ACACATACCCTACTCTTATGAGCAC 59.931 44.000 5.57 0.00 43.85 4.40
646 653 4.037565 CGCACACATACCCTACTCTTATGA 59.962 45.833 0.00 0.00 0.00 2.15
647 654 4.202121 ACGCACACATACCCTACTCTTATG 60.202 45.833 0.00 0.00 0.00 1.90
648 655 3.958798 ACGCACACATACCCTACTCTTAT 59.041 43.478 0.00 0.00 0.00 1.73
649 656 3.359033 ACGCACACATACCCTACTCTTA 58.641 45.455 0.00 0.00 0.00 2.10
650 657 2.176889 ACGCACACATACCCTACTCTT 58.823 47.619 0.00 0.00 0.00 2.85
652 659 2.094390 TGAACGCACACATACCCTACTC 60.094 50.000 0.00 0.00 0.00 2.59
654 661 2.373540 TGAACGCACACATACCCTAC 57.626 50.000 0.00 0.00 0.00 3.18
655 662 3.489568 CGTATGAACGCACACATACCCTA 60.490 47.826 14.22 0.00 43.07 3.53
656 663 2.737359 CGTATGAACGCACACATACCCT 60.737 50.000 14.22 0.00 43.07 4.34
657 664 1.591158 CGTATGAACGCACACATACCC 59.409 52.381 14.22 0.00 43.07 3.69
658 665 2.990774 CGTATGAACGCACACATACC 57.009 50.000 14.22 3.13 43.07 2.73
668 675 3.425525 GCATACACTCATCCGTATGAACG 59.574 47.826 12.46 0.00 45.09 3.95
669 676 4.209288 GTGCATACACTCATCCGTATGAAC 59.791 45.833 12.46 8.84 45.09 3.18
670 677 4.368315 GTGCATACACTCATCCGTATGAA 58.632 43.478 12.46 0.46 45.09 2.57
671 678 3.550030 CGTGCATACACTCATCCGTATGA 60.550 47.826 12.46 0.00 45.09 2.15
672 679 2.726241 CGTGCATACACTCATCCGTATG 59.274 50.000 0.00 0.00 45.10 2.39
673 680 2.361119 ACGTGCATACACTCATCCGTAT 59.639 45.455 0.00 0.00 45.10 3.06
676 683 0.923403 CACGTGCATACACTCATCCG 59.077 55.000 0.82 0.00 45.10 4.18
677 684 2.010145 ACACGTGCATACACTCATCC 57.990 50.000 17.22 0.00 45.10 3.51
678 685 6.149633 TCATATACACGTGCATACACTCATC 58.850 40.000 17.22 0.00 45.10 2.92
680 687 5.508200 TCATATACACGTGCATACACTCA 57.492 39.130 17.22 0.00 45.10 3.41
681 688 4.383052 GCTCATATACACGTGCATACACTC 59.617 45.833 17.22 0.27 45.10 3.51
682 689 4.299155 GCTCATATACACGTGCATACACT 58.701 43.478 17.22 0.00 45.10 3.55
683 690 3.119628 CGCTCATATACACGTGCATACAC 59.880 47.826 17.22 2.67 43.76 2.90
684 691 3.305110 CGCTCATATACACGTGCATACA 58.695 45.455 17.22 2.39 0.00 2.29
685 692 2.090658 GCGCTCATATACACGTGCATAC 59.909 50.000 17.22 0.00 33.41 2.39
686 693 2.030274 AGCGCTCATATACACGTGCATA 60.030 45.455 17.22 13.68 35.49 3.14
687 694 1.139989 GCGCTCATATACACGTGCAT 58.860 50.000 17.22 11.52 33.41 3.96
688 695 0.102300 AGCGCTCATATACACGTGCA 59.898 50.000 17.22 2.06 35.49 4.57
689 696 1.209128 AAGCGCTCATATACACGTGC 58.791 50.000 17.22 0.00 0.00 5.34
690 697 3.981416 ACATAAGCGCTCATATACACGTG 59.019 43.478 12.06 15.48 0.00 4.49
691 698 4.238761 ACATAAGCGCTCATATACACGT 57.761 40.909 12.06 0.00 0.00 4.49
692 699 5.576337 AAACATAAGCGCTCATATACACG 57.424 39.130 12.06 0.00 0.00 4.49
693 700 8.592998 GGTATAAACATAAGCGCTCATATACAC 58.407 37.037 12.06 1.54 30.37 2.90
694 701 7.486870 CGGTATAAACATAAGCGCTCATATACA 59.513 37.037 12.06 0.00 30.37 2.29
695 702 7.699391 TCGGTATAAACATAAGCGCTCATATAC 59.301 37.037 12.06 15.68 34.35 1.47
696 703 7.764331 TCGGTATAAACATAAGCGCTCATATA 58.236 34.615 12.06 0.00 34.35 0.86
697 704 6.627243 TCGGTATAAACATAAGCGCTCATAT 58.373 36.000 12.06 2.36 34.35 1.78
698 705 6.016213 TCGGTATAAACATAAGCGCTCATA 57.984 37.500 12.06 0.00 34.35 2.15
699 706 4.878439 TCGGTATAAACATAAGCGCTCAT 58.122 39.130 12.06 0.00 34.35 2.90
700 707 4.310357 TCGGTATAAACATAAGCGCTCA 57.690 40.909 12.06 0.00 34.35 4.26
701 708 4.091509 CCATCGGTATAAACATAAGCGCTC 59.908 45.833 12.06 0.00 34.35 5.03
702 709 3.994392 CCATCGGTATAAACATAAGCGCT 59.006 43.478 2.64 2.64 34.35 5.92
703 710 3.744426 ACCATCGGTATAAACATAAGCGC 59.256 43.478 0.00 0.00 32.11 5.92
704 711 4.986034 TGACCATCGGTATAAACATAAGCG 59.014 41.667 0.00 0.00 35.25 4.68
705 712 6.854496 TTGACCATCGGTATAAACATAAGC 57.146 37.500 0.00 0.00 35.25 3.09
883 5683 5.013391 AGGGTGAATCAAATCTTTGGCATTT 59.987 36.000 3.02 0.00 38.66 2.32
920 5721 0.318784 CTCGGTCCTTGTATAGCCGC 60.319 60.000 0.00 0.00 41.89 6.53
923 5724 3.060602 GCAATCTCGGTCCTTGTATAGC 58.939 50.000 0.00 0.00 0.00 2.97
943 5746 1.940613 CTTTGTGCCTAAGGATACGGC 59.059 52.381 0.00 0.00 44.02 5.68
961 5764 9.591792 GATGGAAAATAGCTTATTTCTTTGCTT 57.408 29.630 18.02 5.52 37.39 3.91
1023 5826 0.887387 CGAAAACCACACCCATCCGT 60.887 55.000 0.00 0.00 0.00 4.69
1031 5834 4.273969 TCATAAGAACCACGAAAACCACAC 59.726 41.667 0.00 0.00 0.00 3.82
1105 5908 6.753279 ACATGAACAAAACAACAAGAGATGTG 59.247 34.615 0.00 0.00 42.99 3.21
1392 6250 0.247301 GCGCAACAGCACTAATCGAC 60.247 55.000 0.30 0.00 37.05 4.20
1398 6256 1.447838 GCTAGGCGCAACAGCACTA 60.448 57.895 18.66 4.96 39.27 2.74
1504 6371 1.537638 TGCACCGCATGACGTAAAAAT 59.462 42.857 0.00 0.00 41.42 1.82
1522 7293 3.743396 CCTCGCCAAAGTAATAGATCTGC 59.257 47.826 5.18 0.00 0.00 4.26
1600 8156 9.378551 ACAAAGAAGAGCATATACGATAAACAA 57.621 29.630 0.00 0.00 0.00 2.83
1610 8166 5.620738 AGGAGCACAAAGAAGAGCATATA 57.379 39.130 0.00 0.00 0.00 0.86
1624 8180 0.976641 CTGTTCTGGGTAGGAGCACA 59.023 55.000 0.00 0.00 0.00 4.57
1714 8281 5.420104 CCTATTCCCAATGCATATCTTTCCC 59.580 44.000 0.00 0.00 0.00 3.97
1715 8282 6.012745 ACCTATTCCCAATGCATATCTTTCC 58.987 40.000 0.00 0.00 0.00 3.13
1716 8283 7.530426 AACCTATTCCCAATGCATATCTTTC 57.470 36.000 0.00 0.00 0.00 2.62
1717 8284 7.530426 GAACCTATTCCCAATGCATATCTTT 57.470 36.000 0.00 0.00 0.00 2.52
1810 8380 8.585471 ATGGTCTGATCTTCATGTGTTTTTAT 57.415 30.769 0.00 0.00 0.00 1.40
1822 8392 5.748152 CGAGAGAAAAGATGGTCTGATCTTC 59.252 44.000 0.00 0.00 41.02 2.87
1826 8396 3.133721 CCCGAGAGAAAAGATGGTCTGAT 59.866 47.826 0.00 0.00 0.00 2.90
1860 8430 8.202137 CCCAATGCATATCTTTTCTCAATCTTT 58.798 33.333 0.00 0.00 0.00 2.52
1861 8431 7.562454 TCCCAATGCATATCTTTTCTCAATCTT 59.438 33.333 0.00 0.00 0.00 2.40
1862 8432 7.064866 TCCCAATGCATATCTTTTCTCAATCT 58.935 34.615 0.00 0.00 0.00 2.40
1863 8433 7.281040 TCCCAATGCATATCTTTTCTCAATC 57.719 36.000 0.00 0.00 0.00 2.67
1864 8434 7.664552 TTCCCAATGCATATCTTTTCTCAAT 57.335 32.000 0.00 0.00 0.00 2.57
1865 8435 7.396907 TCTTTCCCAATGCATATCTTTTCTCAA 59.603 33.333 0.00 0.00 0.00 3.02
1866 8436 6.891361 TCTTTCCCAATGCATATCTTTTCTCA 59.109 34.615 0.00 0.00 0.00 3.27
1867 8437 7.338800 TCTTTCCCAATGCATATCTTTTCTC 57.661 36.000 0.00 0.00 0.00 2.87
1868 8438 7.909485 ATCTTTCCCAATGCATATCTTTTCT 57.091 32.000 0.00 0.00 0.00 2.52
1869 8439 9.635520 CATATCTTTCCCAATGCATATCTTTTC 57.364 33.333 0.00 0.00 0.00 2.29
1870 8440 8.092687 GCATATCTTTCCCAATGCATATCTTTT 58.907 33.333 0.00 0.00 43.30 2.27
1871 8441 7.609056 GCATATCTTTCCCAATGCATATCTTT 58.391 34.615 0.00 0.00 43.30 2.52
1872 8442 7.166691 GCATATCTTTCCCAATGCATATCTT 57.833 36.000 0.00 0.00 43.30 2.40
1873 8443 6.770746 GCATATCTTTCCCAATGCATATCT 57.229 37.500 0.00 0.00 43.30 1.98
1879 8449 4.312443 CCAATGCATATCTTTCCCAATGC 58.688 43.478 0.00 0.00 43.92 3.56
1880 8450 4.589798 TCCCAATGCATATCTTTCCCAATG 59.410 41.667 0.00 0.00 0.00 2.82
1881 8451 4.818447 TCCCAATGCATATCTTTCCCAAT 58.182 39.130 0.00 0.00 0.00 3.16
1882 8452 4.262891 TCCCAATGCATATCTTTCCCAA 57.737 40.909 0.00 0.00 0.00 4.12
1883 8453 3.969466 TCCCAATGCATATCTTTCCCA 57.031 42.857 0.00 0.00 0.00 4.37
1884 8454 5.420104 CCTATTCCCAATGCATATCTTTCCC 59.580 44.000 0.00 0.00 0.00 3.97
1885 8455 6.012745 ACCTATTCCCAATGCATATCTTTCC 58.987 40.000 0.00 0.00 0.00 3.13
1886 8456 7.530426 AACCTATTCCCAATGCATATCTTTC 57.470 36.000 0.00 0.00 0.00 2.62
1887 8457 7.530426 GAACCTATTCCCAATGCATATCTTT 57.470 36.000 0.00 0.00 0.00 2.52
1907 8477 6.551601 TGTTCTTATGATCTCTAGGAGGAACC 59.448 42.308 0.00 0.00 39.35 3.62
1908 8478 7.286775 ACTGTTCTTATGATCTCTAGGAGGAAC 59.713 40.741 0.00 0.00 0.00 3.62
1909 8479 7.358263 ACTGTTCTTATGATCTCTAGGAGGAA 58.642 38.462 0.00 0.00 0.00 3.36
1910 8480 6.916909 ACTGTTCTTATGATCTCTAGGAGGA 58.083 40.000 0.00 0.00 0.00 3.71
1911 8481 7.393234 CCTACTGTTCTTATGATCTCTAGGAGG 59.607 44.444 0.00 0.00 0.00 4.30
1912 8482 8.160765 TCCTACTGTTCTTATGATCTCTAGGAG 58.839 40.741 0.00 0.00 0.00 3.69
1913 8483 7.940137 GTCCTACTGTTCTTATGATCTCTAGGA 59.060 40.741 0.00 0.00 0.00 2.94
1914 8484 7.175990 GGTCCTACTGTTCTTATGATCTCTAGG 59.824 44.444 0.00 0.00 0.00 3.02
1915 8485 7.721842 TGGTCCTACTGTTCTTATGATCTCTAG 59.278 40.741 0.00 0.00 0.00 2.43
1916 8486 7.583625 TGGTCCTACTGTTCTTATGATCTCTA 58.416 38.462 0.00 0.00 0.00 2.43
1917 8487 6.436027 TGGTCCTACTGTTCTTATGATCTCT 58.564 40.000 0.00 0.00 0.00 3.10
1918 8488 6.239176 CCTGGTCCTACTGTTCTTATGATCTC 60.239 46.154 0.00 0.00 0.00 2.75
1919 8489 5.600484 CCTGGTCCTACTGTTCTTATGATCT 59.400 44.000 0.00 0.00 0.00 2.75
1920 8490 5.364157 ACCTGGTCCTACTGTTCTTATGATC 59.636 44.000 0.00 0.00 0.00 2.92
1921 8491 5.281314 ACCTGGTCCTACTGTTCTTATGAT 58.719 41.667 0.00 0.00 0.00 2.45
1922 8492 4.684724 ACCTGGTCCTACTGTTCTTATGA 58.315 43.478 0.00 0.00 0.00 2.15
1923 8493 6.323996 TGATACCTGGTCCTACTGTTCTTATG 59.676 42.308 0.63 0.00 0.00 1.90
1924 8494 6.441222 TGATACCTGGTCCTACTGTTCTTAT 58.559 40.000 0.63 0.00 0.00 1.73
1925 8495 5.834460 TGATACCTGGTCCTACTGTTCTTA 58.166 41.667 0.63 0.00 0.00 2.10
1926 8496 4.684724 TGATACCTGGTCCTACTGTTCTT 58.315 43.478 0.63 0.00 0.00 2.52
1927 8497 4.332683 TGATACCTGGTCCTACTGTTCT 57.667 45.455 0.63 0.00 0.00 3.01
1928 8498 5.416271 TTTGATACCTGGTCCTACTGTTC 57.584 43.478 0.63 0.00 0.00 3.18
1929 8499 7.504926 TTATTTGATACCTGGTCCTACTGTT 57.495 36.000 0.63 0.00 0.00 3.16
1930 8500 7.504926 TTTATTTGATACCTGGTCCTACTGT 57.495 36.000 0.63 0.00 0.00 3.55
1931 8501 8.210946 TGATTTATTTGATACCTGGTCCTACTG 58.789 37.037 0.63 0.00 0.00 2.74
1932 8502 8.331931 TGATTTATTTGATACCTGGTCCTACT 57.668 34.615 0.63 0.00 0.00 2.57
1933 8503 8.974060 TTGATTTATTTGATACCTGGTCCTAC 57.026 34.615 0.63 0.00 0.00 3.18
1934 8504 8.998814 TCTTGATTTATTTGATACCTGGTCCTA 58.001 33.333 0.63 0.00 0.00 2.94
1935 8505 7.872138 TCTTGATTTATTTGATACCTGGTCCT 58.128 34.615 0.63 0.00 0.00 3.85
1936 8506 8.571336 CATCTTGATTTATTTGATACCTGGTCC 58.429 37.037 0.63 0.00 0.00 4.46
1937 8507 8.571336 CCATCTTGATTTATTTGATACCTGGTC 58.429 37.037 0.63 0.00 0.00 4.02
1938 8508 8.061304 ACCATCTTGATTTATTTGATACCTGGT 58.939 33.333 4.05 4.05 0.00 4.00
1939 8509 8.469309 ACCATCTTGATTTATTTGATACCTGG 57.531 34.615 0.00 0.00 0.00 4.45
1940 8510 9.347240 AGACCATCTTGATTTATTTGATACCTG 57.653 33.333 0.00 0.00 0.00 4.00
1941 8511 9.566432 GAGACCATCTTGATTTATTTGATACCT 57.434 33.333 0.00 0.00 0.00 3.08
1942 8512 9.342308 TGAGACCATCTTGATTTATTTGATACC 57.658 33.333 0.00 0.00 0.00 2.73
1945 8515 9.636789 TCATGAGACCATCTTGATTTATTTGAT 57.363 29.630 0.00 0.00 37.22 2.57
1946 8516 9.465199 TTCATGAGACCATCTTGATTTATTTGA 57.535 29.630 0.00 0.00 40.62 2.69
1950 8520 8.400947 CGTTTTCATGAGACCATCTTGATTTAT 58.599 33.333 0.00 0.00 40.62 1.40
1951 8521 7.606073 TCGTTTTCATGAGACCATCTTGATTTA 59.394 33.333 0.00 0.00 40.62 1.40
1952 8522 6.430925 TCGTTTTCATGAGACCATCTTGATTT 59.569 34.615 0.00 0.00 40.62 2.17
1953 8523 5.939883 TCGTTTTCATGAGACCATCTTGATT 59.060 36.000 0.00 0.00 40.62 2.57
1954 8524 5.491070 TCGTTTTCATGAGACCATCTTGAT 58.509 37.500 0.00 0.00 40.62 2.57
1955 8525 4.893608 TCGTTTTCATGAGACCATCTTGA 58.106 39.130 0.00 0.00 39.60 3.02
1956 8526 5.808042 ATCGTTTTCATGAGACCATCTTG 57.192 39.130 0.00 0.00 35.01 3.02
1957 8527 9.613428 TTATAATCGTTTTCATGAGACCATCTT 57.387 29.630 0.00 0.00 0.00 2.40
1958 8528 9.613428 TTTATAATCGTTTTCATGAGACCATCT 57.387 29.630 0.00 0.00 0.00 2.90
1961 8531 9.834628 GTTTTTATAATCGTTTTCATGAGACCA 57.165 29.630 0.00 0.00 0.00 4.02
1962 8532 9.834628 TGTTTTTATAATCGTTTTCATGAGACC 57.165 29.630 0.00 0.00 0.00 3.85
1978 8548 9.513906 TGGTCTGATCTTCATGTGTTTTTATAA 57.486 29.630 0.00 0.00 0.00 0.98
1979 8549 9.685276 ATGGTCTGATCTTCATGTGTTTTTATA 57.315 29.630 0.00 0.00 0.00 0.98
1980 8550 8.585471 ATGGTCTGATCTTCATGTGTTTTTAT 57.415 30.769 0.00 0.00 0.00 1.40
1981 8551 7.884877 AGATGGTCTGATCTTCATGTGTTTTTA 59.115 33.333 6.59 0.00 27.38 1.52
1982 8552 6.718454 AGATGGTCTGATCTTCATGTGTTTTT 59.282 34.615 6.59 0.00 27.38 1.94
1983 8553 6.243900 AGATGGTCTGATCTTCATGTGTTTT 58.756 36.000 6.59 0.00 27.38 2.43
1984 8554 5.813383 AGATGGTCTGATCTTCATGTGTTT 58.187 37.500 6.59 0.00 27.38 2.83
1985 8555 5.432680 AGATGGTCTGATCTTCATGTGTT 57.567 39.130 6.59 0.00 27.38 3.32
1986 8556 5.432680 AAGATGGTCTGATCTTCATGTGT 57.567 39.130 6.59 0.00 38.09 3.72
1987 8557 6.598457 AGAAAAGATGGTCTGATCTTCATGTG 59.402 38.462 6.59 0.00 41.02 3.21
1988 8558 6.719301 AGAAAAGATGGTCTGATCTTCATGT 58.281 36.000 6.59 0.00 41.02 3.21
1989 8559 7.049133 AGAGAAAAGATGGTCTGATCTTCATG 58.951 38.462 6.59 0.00 41.02 3.07
1990 8560 7.197901 AGAGAAAAGATGGTCTGATCTTCAT 57.802 36.000 6.59 0.00 41.02 2.57
1991 8561 6.617782 AGAGAAAAGATGGTCTGATCTTCA 57.382 37.500 6.59 0.00 41.02 3.02
1992 8562 5.748152 CGAGAGAAAAGATGGTCTGATCTTC 59.252 44.000 0.00 0.00 41.02 2.87
1993 8563 5.395103 CCGAGAGAAAAGATGGTCTGATCTT 60.395 44.000 0.00 0.00 43.24 2.40
1994 8564 4.099266 CCGAGAGAAAAGATGGTCTGATCT 59.901 45.833 0.00 0.00 33.91 2.75
1995 8565 4.367450 CCGAGAGAAAAGATGGTCTGATC 58.633 47.826 0.00 0.00 0.00 2.92
1996 8566 3.133721 CCCGAGAGAAAAGATGGTCTGAT 59.866 47.826 0.00 0.00 0.00 2.90
1997 8567 2.497675 CCCGAGAGAAAAGATGGTCTGA 59.502 50.000 0.00 0.00 0.00 3.27
1998 8568 2.234908 ACCCGAGAGAAAAGATGGTCTG 59.765 50.000 0.00 0.00 0.00 3.51
1999 8569 2.541466 ACCCGAGAGAAAAGATGGTCT 58.459 47.619 0.00 0.00 0.00 3.85
2000 8570 3.336138 AACCCGAGAGAAAAGATGGTC 57.664 47.619 0.00 0.00 0.00 4.02
2001 8571 4.903045 TTAACCCGAGAGAAAAGATGGT 57.097 40.909 0.00 0.00 0.00 3.55
2002 8572 6.569179 TTTTTAACCCGAGAGAAAAGATGG 57.431 37.500 0.00 0.00 0.00 3.51
2003 8573 6.072452 AGCTTTTTAACCCGAGAGAAAAGATG 60.072 38.462 10.14 0.00 38.79 2.90
2004 8574 6.004574 AGCTTTTTAACCCGAGAGAAAAGAT 58.995 36.000 10.14 2.20 38.79 2.40
2005 8575 5.374071 AGCTTTTTAACCCGAGAGAAAAGA 58.626 37.500 10.14 0.00 38.79 2.52
2006 8576 5.470437 AGAGCTTTTTAACCCGAGAGAAAAG 59.530 40.000 0.00 0.00 39.24 2.27
2007 8577 5.374071 AGAGCTTTTTAACCCGAGAGAAAA 58.626 37.500 0.00 0.00 0.00 2.29
2008 8578 4.969484 AGAGCTTTTTAACCCGAGAGAAA 58.031 39.130 0.00 0.00 0.00 2.52
2009 8579 4.562963 GGAGAGCTTTTTAACCCGAGAGAA 60.563 45.833 0.00 0.00 0.00 2.87
2010 8580 3.056035 GGAGAGCTTTTTAACCCGAGAGA 60.056 47.826 0.00 0.00 0.00 3.10
2011 8581 3.263261 GGAGAGCTTTTTAACCCGAGAG 58.737 50.000 0.00 0.00 0.00 3.20
2012 8582 2.635915 TGGAGAGCTTTTTAACCCGAGA 59.364 45.455 0.00 0.00 0.00 4.04
2013 8583 3.053831 TGGAGAGCTTTTTAACCCGAG 57.946 47.619 0.00 0.00 0.00 4.63
2014 8584 3.713826 ATGGAGAGCTTTTTAACCCGA 57.286 42.857 0.00 0.00 0.00 5.14
2015 8585 7.745620 ATTATATGGAGAGCTTTTTAACCCG 57.254 36.000 0.00 0.00 0.00 5.28
2016 8586 8.731605 GCTATTATATGGAGAGCTTTTTAACCC 58.268 37.037 0.00 0.00 0.00 4.11
2017 8587 9.284968 TGCTATTATATGGAGAGCTTTTTAACC 57.715 33.333 8.41 0.00 34.19 2.85
2019 8589 9.284968 GGTGCTATTATATGGAGAGCTTTTTAA 57.715 33.333 8.41 0.00 34.19 1.52
2020 8590 8.436778 TGGTGCTATTATATGGAGAGCTTTTTA 58.563 33.333 8.41 0.00 34.19 1.52
2029 8599 8.627208 AGTTTCATTGGTGCTATTATATGGAG 57.373 34.615 0.00 0.00 0.00 3.86
2128 8919 4.759693 ACTTTTCATGTCTGCGTTGGAATA 59.240 37.500 0.00 0.00 0.00 1.75
2166 8957 9.661563 ATGAACACCGTTCTGAAAATTATACTA 57.338 29.630 8.23 0.00 0.00 1.82
2167 8958 7.972832 TGAACACCGTTCTGAAAATTATACT 57.027 32.000 8.23 0.00 0.00 2.12
2168 8959 9.061610 CAATGAACACCGTTCTGAAAATTATAC 57.938 33.333 8.23 0.00 0.00 1.47
2237 9030 3.089284 GTTGCACCCTTAATTAGCACCT 58.911 45.455 0.00 0.00 34.56 4.00
2354 9147 2.726760 GAGTCGAGCACAACACTAACTG 59.273 50.000 0.00 0.00 0.00 3.16
2366 9159 2.868196 CTCGTTCGGAGTCGAGCA 59.132 61.111 16.89 0.00 46.75 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.