Multiple sequence alignment - TraesCS1A01G105900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G105900 chr1A 100.000 5604 0 0 1 5604 102365813 102371416 0.000000e+00 10349.0
1 TraesCS1A01G105900 chr1A 85.443 158 23 0 1288 1445 102360066 102360223 1.250000e-36 165.0
2 TraesCS1A01G105900 chr1D 92.911 1721 79 21 3449 5135 102522362 102520651 0.000000e+00 2462.0
3 TraesCS1A01G105900 chr1D 89.506 1296 88 26 773 2045 102526317 102525047 0.000000e+00 1596.0
4 TraesCS1A01G105900 chr1D 87.627 1083 67 31 2290 3353 102524486 102523452 0.000000e+00 1195.0
5 TraesCS1A01G105900 chr1D 87.423 485 42 7 5132 5602 102519826 102519347 1.780000e-149 540.0
6 TraesCS1A01G105900 chr1D 83.951 405 32 12 223 608 102526719 102526329 1.920000e-94 357.0
7 TraesCS1A01G105900 chr1D 90.840 262 11 6 2043 2303 102524750 102524501 6.950000e-89 339.0
8 TraesCS1A01G105900 chr1D 84.810 158 24 0 1288 1445 102533619 102533462 5.810000e-35 159.0
9 TraesCS1A01G105900 chr1D 82.653 196 12 8 1 196 102527030 102526857 2.700000e-33 154.0
10 TraesCS1A01G105900 chr1D 87.500 64 5 2 5297 5358 476792728 476792790 2.800000e-08 71.3
11 TraesCS1A01G105900 chr1B 86.524 1447 91 50 1580 2998 157928074 157926704 0.000000e+00 1496.0
12 TraesCS1A01G105900 chr1B 93.318 868 43 8 4314 5181 157925386 157924534 0.000000e+00 1267.0
13 TraesCS1A01G105900 chr1B 88.539 794 52 14 773 1547 157928844 157928071 0.000000e+00 926.0
14 TraesCS1A01G105900 chr1B 92.962 611 19 10 3681 4277 157926083 157925483 0.000000e+00 869.0
15 TraesCS1A01G105900 chr1B 93.916 263 12 1 3051 3313 157926696 157926438 1.460000e-105 394.0
16 TraesCS1A01G105900 chr1B 96.121 232 8 1 3449 3679 157926347 157926116 1.470000e-100 377.0
17 TraesCS1A01G105900 chr1B 84.874 238 24 2 5177 5402 157923315 157923078 4.370000e-56 230.0
18 TraesCS1A01G105900 chr1B 86.175 217 16 9 5 213 157930115 157929905 7.310000e-54 222.0
19 TraesCS1A01G105900 chr1B 88.667 150 7 4 5459 5604 157902828 157902685 2.080000e-39 174.0
20 TraesCS1A01G105900 chr1B 100.000 29 0 0 189 217 470541495 470541523 3.000000e-03 54.7
21 TraesCS1A01G105900 chr6B 86.857 175 19 3 1289 1461 46531661 46531489 5.730000e-45 193.0
22 TraesCS1A01G105900 chr6B 94.286 35 2 0 183 217 714919722 714919756 3.000000e-03 54.7
23 TraesCS1A01G105900 chr2B 77.397 146 30 2 1296 1441 198760053 198759911 3.600000e-12 84.2
24 TraesCS1A01G105900 chr2B 96.970 33 1 0 185 217 677852925 677852957 7.840000e-04 56.5
25 TraesCS1A01G105900 chr2B 94.444 36 0 2 183 217 503460128 503460094 3.000000e-03 54.7
26 TraesCS1A01G105900 chr7A 91.228 57 3 2 5281 5336 14171406 14171461 6.020000e-10 76.8
27 TraesCS1A01G105900 chr3A 97.059 34 0 1 185 217 550632133 550632166 7.840000e-04 56.5
28 TraesCS1A01G105900 chr3A 94.286 35 1 1 4456 4489 13412969 13412935 1.000000e-02 52.8
29 TraesCS1A01G105900 chr6A 100.000 29 0 0 189 217 502402529 502402501 3.000000e-03 54.7
30 TraesCS1A01G105900 chr5B 100.000 29 0 0 189 217 163102225 163102253 3.000000e-03 54.7
31 TraesCS1A01G105900 chr4B 96.970 33 0 1 185 217 163901515 163901546 3.000000e-03 54.7
32 TraesCS1A01G105900 chr2D 100.000 29 0 0 189 217 28843800 28843772 3.000000e-03 54.7
33 TraesCS1A01G105900 chr3D 94.286 35 1 1 4456 4489 6969479 6969513 1.000000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G105900 chr1A 102365813 102371416 5603 False 10349.000 10349 100.000000 1 5604 1 chr1A.!!$F2 5603
1 TraesCS1A01G105900 chr1D 102519347 102527030 7683 True 949.000 2462 87.844429 1 5602 7 chr1D.!!$R2 5601
2 TraesCS1A01G105900 chr1B 157923078 157930115 7037 True 722.625 1496 90.303625 5 5402 8 chr1B.!!$R2 5397

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
619 1334 0.040958 CAAACGCTTCACTGCCACTC 60.041 55.0 0.00 0.00 0.00 3.51 F
1461 2197 0.033601 AGTTGCTCAACCACAACCCA 60.034 50.0 8.95 0.00 45.79 4.51 F
1954 2700 0.103208 CTTCTCGTCTCCAATCGGGG 59.897 60.0 0.00 0.00 37.22 5.73 F
2947 4059 0.395311 ATCTGTGCATGCCCTCCAAG 60.395 55.0 16.68 3.77 0.00 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1723 2467 0.100146 CCGGCTACGTACAGAGTTCC 59.900 60.000 0.00 0.00 38.78 3.62 R
2679 3781 0.247537 GGATAAAGTTTGACCGCGCG 60.248 55.000 25.67 25.67 0.00 6.86 R
3951 6116 0.164647 CTGTCAGCGTAACAGCTTGC 59.835 55.000 3.74 0.00 46.80 4.01 R
4769 7003 1.069906 CAGCTGCGACCTTTACAACAC 60.070 52.381 0.00 0.00 0.00 3.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.134287 GGAGTCTCGGCCATGGCTA 61.134 63.158 34.70 22.18 41.60 3.93
35 37 6.573434 CCATGGCTACCTATTTTTCCTTTTC 58.427 40.000 0.00 0.00 0.00 2.29
48 50 1.499007 TCCTTTTCCTGCCCACTTTCT 59.501 47.619 0.00 0.00 0.00 2.52
62 64 4.006319 CCACTTTCTAGGCAAGGAAGAAG 58.994 47.826 12.13 5.41 42.82 2.85
66 68 4.559862 TTCTAGGCAAGGAAGAAGGAAG 57.440 45.455 0.00 0.00 0.00 3.46
67 69 3.791320 TCTAGGCAAGGAAGAAGGAAGA 58.209 45.455 0.00 0.00 0.00 2.87
68 70 4.168101 TCTAGGCAAGGAAGAAGGAAGAA 58.832 43.478 0.00 0.00 0.00 2.52
70 72 2.163509 GGCAAGGAAGAAGGAAGAACC 58.836 52.381 0.00 0.00 39.35 3.62
71 73 2.163509 GCAAGGAAGAAGGAAGAACCC 58.836 52.381 0.00 0.00 40.05 4.11
72 74 2.427506 CAAGGAAGAAGGAAGAACCCG 58.572 52.381 0.00 0.00 40.05 5.28
113 115 1.867233 GTCAGAGAAGTCAAAGCGCAA 59.133 47.619 11.47 0.00 0.00 4.85
118 120 3.038710 GAGAAGTCAAAGCGCAAACAAG 58.961 45.455 11.47 0.00 0.00 3.16
138 140 6.899114 ACAAGGTTCGATCAAATTACAACTC 58.101 36.000 0.00 0.00 0.00 3.01
152 154 3.788227 ACAACTCTGCCAAGGAATACA 57.212 42.857 0.00 0.00 0.00 2.29
153 155 4.307032 ACAACTCTGCCAAGGAATACAT 57.693 40.909 0.00 0.00 0.00 2.29
207 250 2.758979 GTGATCTACTCCCTCCGTTTCA 59.241 50.000 0.00 0.00 0.00 2.69
213 256 5.974108 TCTACTCCCTCCGTTTCAAAATAG 58.026 41.667 0.00 0.00 0.00 1.73
215 258 5.437191 ACTCCCTCCGTTTCAAAATAGAT 57.563 39.130 0.00 0.00 0.00 1.98
218 261 6.070424 ACTCCCTCCGTTTCAAAATAGATGTA 60.070 38.462 0.00 0.00 0.00 2.29
221 504 7.832187 TCCCTCCGTTTCAAAATAGATGTAATT 59.168 33.333 0.00 0.00 0.00 1.40
255 539 4.337264 AATTATGCAGTTTCCCCCTTCT 57.663 40.909 0.00 0.00 0.00 2.85
286 573 0.912487 ATTAGGGTGCAGAACGGGGA 60.912 55.000 0.00 0.00 0.00 4.81
287 574 1.833787 TTAGGGTGCAGAACGGGGAC 61.834 60.000 0.00 0.00 0.00 4.46
319 611 2.933260 GCTGCTGCTAAGGACTAGAAAC 59.067 50.000 8.53 0.00 36.03 2.78
324 616 4.159879 GCTGCTAAGGACTAGAAACCACTA 59.840 45.833 0.00 0.00 0.00 2.74
326 618 4.710375 TGCTAAGGACTAGAAACCACTAGG 59.290 45.833 0.00 0.00 42.68 3.02
327 619 4.441773 GCTAAGGACTAGAAACCACTAGGC 60.442 50.000 0.00 0.00 44.99 3.93
329 621 3.792515 AGGACTAGAAACCACTAGGCTT 58.207 45.455 0.00 0.00 45.04 4.35
363 656 4.957296 ACAGATCTGAACCGTAAACTTGT 58.043 39.130 29.27 0.00 0.00 3.16
397 691 6.208204 AGTCACCATTGGAAAGAAGATTCTTG 59.792 38.462 10.37 0.00 46.22 3.02
404 698 3.366781 GGAAAGAAGATTCTTGTGCCAGC 60.367 47.826 8.53 0.00 46.22 4.85
486 780 3.723348 GCGGCTTCGTCAACACCC 61.723 66.667 0.00 0.00 36.07 4.61
511 805 2.373502 CCCCACCTCTCCTCCAATAATC 59.626 54.545 0.00 0.00 0.00 1.75
513 807 3.654806 CCCACCTCTCCTCCAATAATCAT 59.345 47.826 0.00 0.00 0.00 2.45
516 810 5.303971 CACCTCTCCTCCAATAATCATGTC 58.696 45.833 0.00 0.00 0.00 3.06
517 811 4.039730 ACCTCTCCTCCAATAATCATGTCG 59.960 45.833 0.00 0.00 0.00 4.35
518 812 4.039730 CCTCTCCTCCAATAATCATGTCGT 59.960 45.833 0.00 0.00 0.00 4.34
533 1238 1.074319 GTCGTTGCCATCTACGCGAA 61.074 55.000 15.93 0.00 40.35 4.70
553 1258 1.615392 AGCCAAACCAGCAATCACTTC 59.385 47.619 0.00 0.00 0.00 3.01
577 1291 6.097129 TCCTGAAATTTAACGGGTGTTTCTTT 59.903 34.615 5.01 0.00 39.54 2.52
608 1323 9.968870 TTTACAAAGATATTTAACCAAACGCTT 57.031 25.926 0.00 0.00 0.00 4.68
609 1324 9.615295 TTACAAAGATATTTAACCAAACGCTTC 57.385 29.630 0.00 0.00 0.00 3.86
611 1326 7.593644 ACAAAGATATTTAACCAAACGCTTCAC 59.406 33.333 0.00 0.00 0.00 3.18
612 1327 7.448748 AAGATATTTAACCAAACGCTTCACT 57.551 32.000 0.00 0.00 0.00 3.41
613 1328 6.842163 AGATATTTAACCAAACGCTTCACTG 58.158 36.000 0.00 0.00 0.00 3.66
614 1329 2.766970 TTAACCAAACGCTTCACTGC 57.233 45.000 0.00 0.00 0.00 4.40
615 1330 0.948678 TAACCAAACGCTTCACTGCC 59.051 50.000 0.00 0.00 0.00 4.85
616 1331 1.034838 AACCAAACGCTTCACTGCCA 61.035 50.000 0.00 0.00 0.00 4.92
617 1332 1.008538 CCAAACGCTTCACTGCCAC 60.009 57.895 0.00 0.00 0.00 5.01
618 1333 1.447317 CCAAACGCTTCACTGCCACT 61.447 55.000 0.00 0.00 0.00 4.00
619 1334 0.040958 CAAACGCTTCACTGCCACTC 60.041 55.000 0.00 0.00 0.00 3.51
620 1335 0.179045 AAACGCTTCACTGCCACTCT 60.179 50.000 0.00 0.00 0.00 3.24
621 1336 0.679505 AACGCTTCACTGCCACTCTA 59.320 50.000 0.00 0.00 0.00 2.43
622 1337 0.679505 ACGCTTCACTGCCACTCTAA 59.320 50.000 0.00 0.00 0.00 2.10
623 1338 1.070134 ACGCTTCACTGCCACTCTAAA 59.930 47.619 0.00 0.00 0.00 1.85
624 1339 2.143122 CGCTTCACTGCCACTCTAAAA 58.857 47.619 0.00 0.00 0.00 1.52
625 1340 2.096218 CGCTTCACTGCCACTCTAAAAC 60.096 50.000 0.00 0.00 0.00 2.43
626 1341 2.878406 GCTTCACTGCCACTCTAAAACA 59.122 45.455 0.00 0.00 0.00 2.83
627 1342 3.304057 GCTTCACTGCCACTCTAAAACAC 60.304 47.826 0.00 0.00 0.00 3.32
628 1343 3.838244 TCACTGCCACTCTAAAACACT 57.162 42.857 0.00 0.00 0.00 3.55
629 1344 4.150897 TCACTGCCACTCTAAAACACTT 57.849 40.909 0.00 0.00 0.00 3.16
630 1345 3.876914 TCACTGCCACTCTAAAACACTTG 59.123 43.478 0.00 0.00 0.00 3.16
631 1346 2.618709 ACTGCCACTCTAAAACACTTGC 59.381 45.455 0.00 0.00 0.00 4.01
632 1347 2.880890 CTGCCACTCTAAAACACTTGCT 59.119 45.455 0.00 0.00 0.00 3.91
633 1348 2.878406 TGCCACTCTAAAACACTTGCTC 59.122 45.455 0.00 0.00 0.00 4.26
634 1349 2.096218 GCCACTCTAAAACACTTGCTCG 60.096 50.000 0.00 0.00 0.00 5.03
635 1350 2.480419 CCACTCTAAAACACTTGCTCGG 59.520 50.000 0.00 0.00 0.00 4.63
636 1351 3.131396 CACTCTAAAACACTTGCTCGGT 58.869 45.455 0.00 0.00 0.00 4.69
637 1352 3.560068 CACTCTAAAACACTTGCTCGGTT 59.440 43.478 0.00 0.00 0.00 4.44
638 1353 3.808174 ACTCTAAAACACTTGCTCGGTTC 59.192 43.478 0.00 0.00 0.00 3.62
639 1354 3.799366 TCTAAAACACTTGCTCGGTTCA 58.201 40.909 0.00 0.00 0.00 3.18
640 1355 2.844122 AAAACACTTGCTCGGTTCAC 57.156 45.000 0.00 0.00 0.00 3.18
641 1356 1.745232 AAACACTTGCTCGGTTCACA 58.255 45.000 0.00 0.00 0.00 3.58
642 1357 1.745232 AACACTTGCTCGGTTCACAA 58.255 45.000 0.00 0.00 0.00 3.33
643 1358 1.745232 ACACTTGCTCGGTTCACAAA 58.255 45.000 0.00 0.00 0.00 2.83
644 1359 2.297701 ACACTTGCTCGGTTCACAAAT 58.702 42.857 0.00 0.00 0.00 2.32
645 1360 2.687935 ACACTTGCTCGGTTCACAAATT 59.312 40.909 0.00 0.00 0.00 1.82
646 1361 3.130340 ACACTTGCTCGGTTCACAAATTT 59.870 39.130 0.00 0.00 0.00 1.82
647 1362 4.336993 ACACTTGCTCGGTTCACAAATTTA 59.663 37.500 0.00 0.00 0.00 1.40
648 1363 5.163602 ACACTTGCTCGGTTCACAAATTTAA 60.164 36.000 0.00 0.00 0.00 1.52
649 1364 5.399301 CACTTGCTCGGTTCACAAATTTAAG 59.601 40.000 0.00 0.00 0.00 1.85
650 1365 5.298276 ACTTGCTCGGTTCACAAATTTAAGA 59.702 36.000 0.00 0.00 0.00 2.10
651 1366 5.103290 TGCTCGGTTCACAAATTTAAGAC 57.897 39.130 0.00 0.00 0.00 3.01
652 1367 4.148891 GCTCGGTTCACAAATTTAAGACG 58.851 43.478 0.00 0.00 0.00 4.18
653 1368 4.319261 GCTCGGTTCACAAATTTAAGACGT 60.319 41.667 0.00 0.00 0.00 4.34
654 1369 5.738118 TCGGTTCACAAATTTAAGACGTT 57.262 34.783 0.00 0.00 0.00 3.99
655 1370 6.121613 TCGGTTCACAAATTTAAGACGTTT 57.878 33.333 0.00 0.00 0.00 3.60
656 1371 6.553524 TCGGTTCACAAATTTAAGACGTTTT 58.446 32.000 0.00 0.00 0.00 2.43
657 1372 6.469595 TCGGTTCACAAATTTAAGACGTTTTG 59.530 34.615 0.83 4.18 35.66 2.44
658 1373 6.291374 CGGTTCACAAATTTAAGACGTTTTGG 60.291 38.462 11.59 3.01 34.23 3.28
659 1374 6.532302 GGTTCACAAATTTAAGACGTTTTGGT 59.468 34.615 11.59 0.00 34.23 3.67
660 1375 7.063662 GGTTCACAAATTTAAGACGTTTTGGTT 59.936 33.333 11.59 0.00 34.23 3.67
661 1376 8.436970 GTTCACAAATTTAAGACGTTTTGGTTT 58.563 29.630 11.59 3.57 34.23 3.27
662 1377 8.535690 TCACAAATTTAAGACGTTTTGGTTTT 57.464 26.923 11.59 2.32 34.23 2.43
663 1378 8.989980 TCACAAATTTAAGACGTTTTGGTTTTT 58.010 25.926 11.59 0.90 34.23 1.94
664 1379 9.256715 CACAAATTTAAGACGTTTTGGTTTTTC 57.743 29.630 11.59 0.00 34.23 2.29
665 1380 9.210329 ACAAATTTAAGACGTTTTGGTTTTTCT 57.790 25.926 11.59 0.00 34.23 2.52
666 1381 9.471742 CAAATTTAAGACGTTTTGGTTTTTCTG 57.528 29.630 0.83 0.00 0.00 3.02
667 1382 8.766000 AATTTAAGACGTTTTGGTTTTTCTGT 57.234 26.923 0.83 0.00 0.00 3.41
668 1383 7.569677 TTTAAGACGTTTTGGTTTTTCTGTG 57.430 32.000 0.83 0.00 0.00 3.66
669 1384 5.379732 AAGACGTTTTGGTTTTTCTGTGA 57.620 34.783 0.00 0.00 0.00 3.58
670 1385 4.729595 AGACGTTTTGGTTTTTCTGTGAC 58.270 39.130 0.00 0.00 0.00 3.67
671 1386 4.457949 AGACGTTTTGGTTTTTCTGTGACT 59.542 37.500 0.00 0.00 0.00 3.41
672 1387 4.729595 ACGTTTTGGTTTTTCTGTGACTC 58.270 39.130 0.00 0.00 0.00 3.36
673 1388 3.783943 CGTTTTGGTTTTTCTGTGACTCG 59.216 43.478 0.00 0.00 0.00 4.18
674 1389 4.436317 CGTTTTGGTTTTTCTGTGACTCGA 60.436 41.667 0.00 0.00 0.00 4.04
675 1390 5.395642 GTTTTGGTTTTTCTGTGACTCGAA 58.604 37.500 0.00 0.00 0.00 3.71
676 1391 5.828299 TTTGGTTTTTCTGTGACTCGAAT 57.172 34.783 0.00 0.00 0.00 3.34
677 1392 5.828299 TTGGTTTTTCTGTGACTCGAATT 57.172 34.783 0.00 0.00 0.00 2.17
678 1393 5.828299 TGGTTTTTCTGTGACTCGAATTT 57.172 34.783 0.00 0.00 0.00 1.82
679 1394 6.928979 TGGTTTTTCTGTGACTCGAATTTA 57.071 33.333 0.00 0.00 0.00 1.40
680 1395 7.504924 TGGTTTTTCTGTGACTCGAATTTAT 57.495 32.000 0.00 0.00 0.00 1.40
681 1396 8.610248 TGGTTTTTCTGTGACTCGAATTTATA 57.390 30.769 0.00 0.00 0.00 0.98
682 1397 9.226606 TGGTTTTTCTGTGACTCGAATTTATAT 57.773 29.630 0.00 0.00 0.00 0.86
688 1403 9.731819 TTCTGTGACTCGAATTTATATAGACAC 57.268 33.333 0.00 0.00 34.76 3.67
689 1404 8.068380 TCTGTGACTCGAATTTATATAGACACG 58.932 37.037 0.00 0.00 36.22 4.49
690 1405 7.700505 TGTGACTCGAATTTATATAGACACGT 58.299 34.615 0.00 0.00 36.22 4.49
691 1406 8.186163 TGTGACTCGAATTTATATAGACACGTT 58.814 33.333 0.00 0.00 36.22 3.99
692 1407 9.017669 GTGACTCGAATTTATATAGACACGTTT 57.982 33.333 0.00 0.00 0.00 3.60
693 1408 9.577110 TGACTCGAATTTATATAGACACGTTTT 57.423 29.630 0.00 0.00 0.00 2.43
694 1409 9.831054 GACTCGAATTTATATAGACACGTTTTG 57.169 33.333 0.00 0.00 0.00 2.44
695 1410 8.325997 ACTCGAATTTATATAGACACGTTTTGC 58.674 33.333 0.00 0.00 0.00 3.68
696 1411 8.415192 TCGAATTTATATAGACACGTTTTGCT 57.585 30.769 0.00 0.00 0.00 3.91
697 1412 8.325282 TCGAATTTATATAGACACGTTTTGCTG 58.675 33.333 0.00 0.00 0.00 4.41
698 1413 8.114290 CGAATTTATATAGACACGTTTTGCTGT 58.886 33.333 0.00 0.00 0.00 4.40
699 1414 9.210426 GAATTTATATAGACACGTTTTGCTGTG 57.790 33.333 0.00 0.00 41.81 3.66
704 1419 2.715737 ACACGTTTTGCTGTGTTTGT 57.284 40.000 0.00 0.00 46.61 2.83
705 1420 3.019933 ACACGTTTTGCTGTGTTTGTT 57.980 38.095 0.00 0.00 46.61 2.83
706 1421 2.983803 ACACGTTTTGCTGTGTTTGTTC 59.016 40.909 0.00 0.00 46.61 3.18
707 1422 2.983136 CACGTTTTGCTGTGTTTGTTCA 59.017 40.909 0.00 0.00 0.00 3.18
708 1423 2.983803 ACGTTTTGCTGTGTTTGTTCAC 59.016 40.909 0.00 0.00 38.63 3.18
709 1424 3.241701 CGTTTTGCTGTGTTTGTTCACT 58.758 40.909 0.00 0.00 38.90 3.41
710 1425 3.300590 CGTTTTGCTGTGTTTGTTCACTC 59.699 43.478 0.00 0.00 38.90 3.51
711 1426 4.233789 GTTTTGCTGTGTTTGTTCACTCA 58.766 39.130 0.00 0.00 38.90 3.41
712 1427 4.511617 TTTGCTGTGTTTGTTCACTCAA 57.488 36.364 0.00 0.00 38.90 3.02
713 1428 4.717233 TTGCTGTGTTTGTTCACTCAAT 57.283 36.364 0.00 0.00 38.90 2.57
714 1429 4.717233 TGCTGTGTTTGTTCACTCAATT 57.283 36.364 0.00 0.00 38.90 2.32
715 1430 4.671377 TGCTGTGTTTGTTCACTCAATTC 58.329 39.130 0.00 0.00 38.90 2.17
716 1431 4.157472 TGCTGTGTTTGTTCACTCAATTCA 59.843 37.500 0.00 0.00 38.90 2.57
717 1432 4.736793 GCTGTGTTTGTTCACTCAATTCAG 59.263 41.667 0.00 0.00 38.90 3.02
718 1433 5.677091 GCTGTGTTTGTTCACTCAATTCAGT 60.677 40.000 0.00 0.00 38.90 3.41
719 1434 6.266168 TGTGTTTGTTCACTCAATTCAGTT 57.734 33.333 0.00 0.00 38.90 3.16
720 1435 6.321717 TGTGTTTGTTCACTCAATTCAGTTC 58.678 36.000 0.00 0.00 38.90 3.01
721 1436 6.072230 TGTGTTTGTTCACTCAATTCAGTTCA 60.072 34.615 0.00 0.00 38.90 3.18
722 1437 6.974622 GTGTTTGTTCACTCAATTCAGTTCAT 59.025 34.615 0.00 0.00 35.68 2.57
723 1438 8.128582 GTGTTTGTTCACTCAATTCAGTTCATA 58.871 33.333 0.00 0.00 35.68 2.15
724 1439 8.849168 TGTTTGTTCACTCAATTCAGTTCATAT 58.151 29.630 0.00 0.00 0.00 1.78
725 1440 9.121517 GTTTGTTCACTCAATTCAGTTCATATG 57.878 33.333 0.00 0.00 0.00 1.78
726 1441 6.845302 TGTTCACTCAATTCAGTTCATATGC 58.155 36.000 0.00 0.00 0.00 3.14
727 1442 5.723492 TCACTCAATTCAGTTCATATGCG 57.277 39.130 0.00 0.00 0.00 4.73
728 1443 4.571984 TCACTCAATTCAGTTCATATGCGG 59.428 41.667 0.00 0.00 0.00 5.69
729 1444 4.333649 CACTCAATTCAGTTCATATGCGGT 59.666 41.667 0.00 0.00 0.00 5.68
730 1445 4.943705 ACTCAATTCAGTTCATATGCGGTT 59.056 37.500 0.00 0.00 0.00 4.44
731 1446 5.065218 ACTCAATTCAGTTCATATGCGGTTC 59.935 40.000 0.00 0.00 0.00 3.62
732 1447 4.940654 TCAATTCAGTTCATATGCGGTTCA 59.059 37.500 0.00 0.00 0.00 3.18
733 1448 5.589855 TCAATTCAGTTCATATGCGGTTCAT 59.410 36.000 0.00 0.00 39.17 2.57
734 1449 4.880886 TTCAGTTCATATGCGGTTCATG 57.119 40.909 0.00 0.00 36.63 3.07
735 1450 3.872696 TCAGTTCATATGCGGTTCATGT 58.127 40.909 0.00 0.00 36.63 3.21
736 1451 4.260985 TCAGTTCATATGCGGTTCATGTT 58.739 39.130 0.00 0.00 36.63 2.71
737 1452 5.423886 TCAGTTCATATGCGGTTCATGTTA 58.576 37.500 0.00 0.00 36.63 2.41
738 1453 5.877564 TCAGTTCATATGCGGTTCATGTTAA 59.122 36.000 0.00 0.00 36.63 2.01
739 1454 6.372937 TCAGTTCATATGCGGTTCATGTTAAA 59.627 34.615 0.00 0.00 36.63 1.52
740 1455 7.026562 CAGTTCATATGCGGTTCATGTTAAAA 58.973 34.615 0.00 0.00 36.63 1.52
741 1456 7.701924 CAGTTCATATGCGGTTCATGTTAAAAT 59.298 33.333 0.00 0.00 36.63 1.82
742 1457 7.701924 AGTTCATATGCGGTTCATGTTAAAATG 59.298 33.333 0.00 0.00 36.63 2.32
743 1458 7.094508 TCATATGCGGTTCATGTTAAAATGT 57.905 32.000 5.52 0.00 36.63 2.71
744 1459 7.542890 TCATATGCGGTTCATGTTAAAATGTT 58.457 30.769 5.52 0.00 36.63 2.71
745 1460 7.700234 TCATATGCGGTTCATGTTAAAATGTTC 59.300 33.333 5.52 0.93 36.63 3.18
746 1461 5.188327 TGCGGTTCATGTTAAAATGTTCA 57.812 34.783 5.52 0.00 0.00 3.18
747 1462 5.592054 TGCGGTTCATGTTAAAATGTTCAA 58.408 33.333 5.52 0.00 0.00 2.69
748 1463 6.042777 TGCGGTTCATGTTAAAATGTTCAAA 58.957 32.000 5.52 0.00 0.00 2.69
749 1464 6.535150 TGCGGTTCATGTTAAAATGTTCAAAA 59.465 30.769 5.52 0.00 0.00 2.44
750 1465 6.843779 GCGGTTCATGTTAAAATGTTCAAAAC 59.156 34.615 5.52 2.70 0.00 2.43
751 1466 7.464710 GCGGTTCATGTTAAAATGTTCAAAACA 60.465 33.333 5.52 0.00 46.94 2.83
768 1483 9.455847 GTTCAAAACATCATCTATTTATGGAGC 57.544 33.333 0.00 0.00 0.00 4.70
771 1486 9.406828 CAAAACATCATCTATTTATGGAGCATG 57.593 33.333 0.00 0.00 0.00 4.06
792 1507 1.275856 TGCAATTGGTGGCTCCATTTC 59.724 47.619 9.42 7.23 46.60 2.17
805 1521 5.003804 GGCTCCATTTCAGTTCTCTAAACA 58.996 41.667 0.00 0.00 0.00 2.83
811 1527 9.567776 TCCATTTCAGTTCTCTAAACATAACAA 57.432 29.630 0.00 0.00 0.00 2.83
892 1613 6.049790 GGAAAGAAGATCCCGCCATATATAC 58.950 44.000 0.00 0.00 0.00 1.47
914 1635 0.361184 GTACGCGCGTAGACACTTTG 59.639 55.000 40.07 5.89 0.00 2.77
985 1706 1.662438 CGAGAAGCCGAGAAGGAGCT 61.662 60.000 0.00 0.00 45.00 4.09
988 1709 3.655810 AAGCCGAGAAGGAGCTGCG 62.656 63.158 0.00 0.00 45.00 5.18
1104 1825 3.490759 GTGGCGGTCATCGTGCTG 61.491 66.667 0.00 0.00 41.72 4.41
1122 1843 1.444553 GTCGCTCACCTTCCTGTCG 60.445 63.158 0.00 0.00 0.00 4.35
1268 1998 2.188207 GCCGGAGAAGGAGAAGCC 59.812 66.667 5.05 0.00 0.00 4.35
1275 2011 2.028020 GGAGAAGGAGAAGCCGAAGAAA 60.028 50.000 0.00 0.00 43.43 2.52
1314 2050 0.599204 TGTTCAACTTCGGCGACTCC 60.599 55.000 10.16 0.00 0.00 3.85
1368 2104 1.741327 GCATCCACATCATGCCACCC 61.741 60.000 0.00 0.00 40.79 4.61
1374 2110 2.366837 ATCATGCCACCCGAGGGA 60.367 61.111 16.26 0.00 38.96 4.20
1456 2192 1.209261 TCTGTGAGTTGCTCAACCACA 59.791 47.619 22.91 22.91 42.46 4.17
1457 2193 2.016318 CTGTGAGTTGCTCAACCACAA 58.984 47.619 23.70 14.86 44.13 3.33
1460 2196 0.668535 GAGTTGCTCAACCACAACCC 59.331 55.000 8.95 0.00 45.79 4.11
1461 2197 0.033601 AGTTGCTCAACCACAACCCA 60.034 50.000 8.95 0.00 45.79 4.51
1462 2198 1.039856 GTTGCTCAACCACAACCCAT 58.960 50.000 1.45 0.00 40.19 4.00
1463 2199 2.158534 AGTTGCTCAACCACAACCCATA 60.159 45.455 8.95 0.00 45.79 2.74
1526 2264 2.297701 ACAAACCGAGTGCTCAATTGT 58.702 42.857 5.13 4.69 0.00 2.71
1545 2283 8.377034 TCAATTGTGAATTCCAAATTCCAGATT 58.623 29.630 5.13 4.93 0.00 2.40
1547 2285 9.657419 AATTGTGAATTCCAAATTCCAGATTAC 57.343 29.630 11.70 2.12 0.00 1.89
1549 2287 8.421249 TGTGAATTCCAAATTCCAGATTACTT 57.579 30.769 2.27 0.00 0.00 2.24
1550 2288 8.306038 TGTGAATTCCAAATTCCAGATTACTTG 58.694 33.333 2.27 0.00 0.00 3.16
1552 2290 8.869109 TGAATTCCAAATTCCAGATTACTTGTT 58.131 29.630 2.27 0.00 0.00 2.83
1553 2291 9.710900 GAATTCCAAATTCCAGATTACTTGTTT 57.289 29.630 0.00 0.00 0.00 2.83
1564 2302 6.238320 CCAGATTACTTGTTTATCAGCTGCTC 60.238 42.308 9.47 0.00 0.00 4.26
1836 2580 4.822026 CCTTCAACGTGGAAGAGATACTT 58.178 43.478 30.36 0.00 45.66 2.24
1837 2581 5.623824 GCCTTCAACGTGGAAGAGATACTTA 60.624 44.000 30.36 0.00 45.66 2.24
1875 2619 0.378962 TCAAAACGGTGGTTGAAGCG 59.621 50.000 5.34 0.00 46.11 4.68
1941 2687 3.330267 CCTCTCCTTTTTGTCCTTCTCG 58.670 50.000 0.00 0.00 0.00 4.04
1943 2689 3.991121 CTCTCCTTTTTGTCCTTCTCGTC 59.009 47.826 0.00 0.00 0.00 4.20
1944 2690 3.641906 TCTCCTTTTTGTCCTTCTCGTCT 59.358 43.478 0.00 0.00 0.00 4.18
1952 2698 1.103803 TCCTTCTCGTCTCCAATCGG 58.896 55.000 0.00 0.00 0.00 4.18
1954 2700 0.103208 CTTCTCGTCTCCAATCGGGG 59.897 60.000 0.00 0.00 37.22 5.73
1979 2727 6.532302 GGAGAGAAAGAAAGAAACCTATCGTC 59.468 42.308 0.00 0.00 0.00 4.20
2110 3165 7.603024 AGACCTGTTCTTTGTGCTTAGTTATAC 59.397 37.037 0.00 0.00 0.00 1.47
2111 3166 7.450903 ACCTGTTCTTTGTGCTTAGTTATACT 58.549 34.615 0.00 0.00 0.00 2.12
2112 3167 8.591072 ACCTGTTCTTTGTGCTTAGTTATACTA 58.409 33.333 0.00 0.00 0.00 1.82
2167 3222 1.338020 GGCCAAACAGGTGAAGAACAG 59.662 52.381 0.00 0.00 40.61 3.16
2239 3298 5.735285 AGTAAAGCTACCTCGGTAAAACT 57.265 39.130 0.00 0.00 0.00 2.66
2242 3301 7.670364 AGTAAAGCTACCTCGGTAAAACTAAA 58.330 34.615 0.00 0.00 0.00 1.85
2243 3302 8.150296 AGTAAAGCTACCTCGGTAAAACTAAAA 58.850 33.333 0.00 0.00 0.00 1.52
2246 3305 6.762333 AGCTACCTCGGTAAAACTAAAAAGA 58.238 36.000 0.00 0.00 0.00 2.52
2247 3306 7.219322 AGCTACCTCGGTAAAACTAAAAAGAA 58.781 34.615 0.00 0.00 0.00 2.52
2248 3307 7.881751 AGCTACCTCGGTAAAACTAAAAAGAAT 59.118 33.333 0.00 0.00 0.00 2.40
2249 3308 8.509690 GCTACCTCGGTAAAACTAAAAAGAATT 58.490 33.333 0.00 0.00 0.00 2.17
2254 3313 8.393671 TCGGTAAAACTAAAAAGAATTAGGCA 57.606 30.769 0.00 0.00 37.24 4.75
2255 3314 8.291740 TCGGTAAAACTAAAAAGAATTAGGCAC 58.708 33.333 0.00 0.00 37.24 5.01
2256 3315 7.269724 CGGTAAAACTAAAAAGAATTAGGCACG 59.730 37.037 0.00 0.00 37.24 5.34
2277 3336 2.368980 CGTTTAGCGCCTGAATTAGC 57.631 50.000 2.29 0.00 0.00 3.09
2344 3433 1.566231 CTGAAAGGGGATTGGGCTAGT 59.434 52.381 0.00 0.00 0.00 2.57
2345 3434 2.777692 CTGAAAGGGGATTGGGCTAGTA 59.222 50.000 0.00 0.00 0.00 1.82
2346 3435 2.777692 TGAAAGGGGATTGGGCTAGTAG 59.222 50.000 0.00 0.00 0.00 2.57
2382 3476 9.658799 AAAGCGTGCAGATGATATAGTAATAAT 57.341 29.630 0.00 0.00 0.00 1.28
2471 3573 2.549754 CCCATGTGTTGTCTGTTCTGTC 59.450 50.000 0.00 0.00 0.00 3.51
2472 3574 3.205338 CCATGTGTTGTCTGTTCTGTCA 58.795 45.455 0.00 0.00 0.00 3.58
2546 3648 3.957497 ACATTGCAGTTAGGGTTTGAACA 59.043 39.130 0.00 0.00 0.00 3.18
2547 3649 4.202111 ACATTGCAGTTAGGGTTTGAACAC 60.202 41.667 0.00 0.00 0.00 3.32
2583 3685 2.297033 CCACATGGTTTTCTTGTCCCAG 59.703 50.000 0.00 0.00 32.28 4.45
2652 3754 2.414029 GCAAGGAATCGTTCAATTGCGA 60.414 45.455 10.01 10.01 41.10 5.10
2679 3781 3.820689 TCATGTTGCGTTATGTTTGCTC 58.179 40.909 0.00 0.00 0.00 4.26
2680 3782 2.308347 TGTTGCGTTATGTTTGCTCG 57.692 45.000 0.00 0.00 0.00 5.03
2681 3783 0.974836 GTTGCGTTATGTTTGCTCGC 59.025 50.000 0.00 0.00 45.70 5.03
2682 3784 3.948081 GCGTTATGTTTGCTCGCG 58.052 55.556 0.00 0.00 37.74 5.87
2718 3820 0.999712 ACCTGTAGTGGAAATGGGGG 59.000 55.000 0.00 0.00 0.00 5.40
2724 3826 0.855400 AGTGGAAATGGGGGTGGGAT 60.855 55.000 0.00 0.00 0.00 3.85
2763 3865 3.493503 CGCCCACTTATAAGTTCCGATTC 59.506 47.826 15.60 1.14 37.08 2.52
2778 3880 2.480419 CCGATTCAGCCGCCTTAATTAG 59.520 50.000 0.00 0.00 0.00 1.73
2918 4030 1.793258 CTATTGCTCCCTGAGATGCG 58.207 55.000 0.00 0.00 0.00 4.73
2923 4035 0.676184 GCTCCCTGAGATGCGTGATA 59.324 55.000 0.00 0.00 0.00 2.15
2945 4057 1.225426 GATCTGTGCATGCCCTCCA 59.775 57.895 16.68 5.78 0.00 3.86
2947 4059 0.395311 ATCTGTGCATGCCCTCCAAG 60.395 55.000 16.68 3.77 0.00 3.61
2948 4060 1.303888 CTGTGCATGCCCTCCAAGT 60.304 57.895 16.68 0.00 0.00 3.16
2953 4065 1.070445 TGCATGCCCTCCAAGTTTTTG 59.930 47.619 16.68 0.00 0.00 2.44
2960 4072 2.558359 CCCTCCAAGTTTTTGAGCGAAT 59.442 45.455 0.00 0.00 36.36 3.34
2961 4073 3.005791 CCCTCCAAGTTTTTGAGCGAATT 59.994 43.478 0.00 0.00 36.36 2.17
2975 4087 6.866010 TGAGCGAATTTATATCACAATGCT 57.134 33.333 0.00 0.00 0.00 3.79
3007 4121 9.589461 TTCCAGTAAATAATAAGTTTGGGTGAA 57.411 29.630 0.00 0.00 0.00 3.18
3008 4122 9.238368 TCCAGTAAATAATAAGTTTGGGTGAAG 57.762 33.333 0.00 0.00 0.00 3.02
3010 4124 9.020731 CAGTAAATAATAAGTTTGGGTGAAGGT 57.979 33.333 0.00 0.00 0.00 3.50
3011 4125 9.596308 AGTAAATAATAAGTTTGGGTGAAGGTT 57.404 29.630 0.00 0.00 0.00 3.50
3014 4128 9.596308 AAATAATAAGTTTGGGTGAAGGTTAGT 57.404 29.630 0.00 0.00 0.00 2.24
3015 4129 9.596308 AATAATAAGTTTGGGTGAAGGTTAGTT 57.404 29.630 0.00 0.00 0.00 2.24
3016 4130 7.907841 AATAAGTTTGGGTGAAGGTTAGTTT 57.092 32.000 0.00 0.00 0.00 2.66
3017 4131 5.847111 AAGTTTGGGTGAAGGTTAGTTTC 57.153 39.130 0.00 0.00 0.00 2.78
3018 4132 4.862371 AGTTTGGGTGAAGGTTAGTTTCA 58.138 39.130 0.00 0.00 32.44 2.69
3020 4134 5.717654 AGTTTGGGTGAAGGTTAGTTTCAAA 59.282 36.000 0.00 0.00 36.41 2.69
3021 4135 6.211785 AGTTTGGGTGAAGGTTAGTTTCAAAA 59.788 34.615 0.00 0.00 36.41 2.44
3022 4136 6.607004 TTGGGTGAAGGTTAGTTTCAAAAA 57.393 33.333 0.00 0.00 36.41 1.94
3042 4156 4.871933 AAAAGTTTGGGTGAAGGCATAG 57.128 40.909 0.00 0.00 0.00 2.23
3043 4157 1.839424 AGTTTGGGTGAAGGCATAGC 58.161 50.000 0.00 0.00 0.00 2.97
3044 4158 0.451783 GTTTGGGTGAAGGCATAGCG 59.548 55.000 0.00 0.00 0.00 4.26
3045 4159 0.679640 TTTGGGTGAAGGCATAGCGG 60.680 55.000 0.00 0.00 0.00 5.52
3046 4160 1.847798 TTGGGTGAAGGCATAGCGGT 61.848 55.000 0.00 0.00 0.00 5.68
3047 4161 1.819632 GGGTGAAGGCATAGCGGTG 60.820 63.158 0.00 0.00 0.00 4.94
3048 4162 1.220749 GGTGAAGGCATAGCGGTGA 59.779 57.895 0.00 0.00 0.00 4.02
3049 4163 1.090052 GGTGAAGGCATAGCGGTGAC 61.090 60.000 0.00 0.00 0.00 3.67
3164 4279 5.655394 AGGAGTTATCACATAGCCTGGATA 58.345 41.667 0.00 0.00 0.00 2.59
3178 4293 5.158141 AGCCTGGATAAGATGGTTGAGATA 58.842 41.667 0.00 0.00 0.00 1.98
3233 4348 5.734720 TGTTCCCTTGTGATAAGAGCTAAG 58.265 41.667 0.00 0.00 0.00 2.18
3236 4351 6.374417 TCCCTTGTGATAAGAGCTAAGTTT 57.626 37.500 0.00 0.00 0.00 2.66
3250 4365 6.098982 AGAGCTAAGTTTCTGTAGCATATGGT 59.901 38.462 12.78 12.78 44.29 3.55
3284 4399 1.344065 TCGGTTGTGTGTAGGGACAT 58.656 50.000 0.00 0.00 38.04 3.06
3314 4429 6.479990 TGATTAACGAGCTGTCCAAGATATTG 59.520 38.462 0.00 0.00 0.00 1.90
3355 4470 3.817148 TTCCGGCACTTACGAAAATTC 57.183 42.857 0.00 0.00 0.00 2.17
3369 4484 5.945775 CGAAAATTCGGTAGAAGTAGGTC 57.054 43.478 7.64 0.00 46.30 3.85
3370 4485 5.648572 CGAAAATTCGGTAGAAGTAGGTCT 58.351 41.667 7.64 0.00 46.30 3.85
3371 4486 5.515626 CGAAAATTCGGTAGAAGTAGGTCTG 59.484 44.000 7.64 0.00 46.30 3.51
3372 4487 5.340439 AAATTCGGTAGAAGTAGGTCTGG 57.660 43.478 0.00 0.00 40.09 3.86
3375 4490 3.350833 TCGGTAGAAGTAGGTCTGGAAC 58.649 50.000 0.00 0.00 0.00 3.62
3378 4493 4.142425 CGGTAGAAGTAGGTCTGGAACTTC 60.142 50.000 6.37 6.37 46.10 3.01
3382 4497 4.908481 AGAAGTAGGTCTGGAACTTCCTTT 59.092 41.667 9.31 0.00 46.64 3.11
3383 4498 4.893829 AGTAGGTCTGGAACTTCCTTTC 57.106 45.455 9.31 0.00 37.46 2.62
3385 4500 4.846940 AGTAGGTCTGGAACTTCCTTTCAT 59.153 41.667 9.31 0.48 37.46 2.57
3389 4504 5.488919 AGGTCTGGAACTTCCTTTCATATGA 59.511 40.000 9.31 0.00 37.46 2.15
3391 4506 6.094186 GGTCTGGAACTTCCTTTCATATGAAC 59.906 42.308 17.76 3.99 37.46 3.18
3392 4507 6.655003 GTCTGGAACTTCCTTTCATATGAACA 59.345 38.462 17.76 8.26 37.46 3.18
3393 4508 7.174946 GTCTGGAACTTCCTTTCATATGAACAA 59.825 37.037 17.76 9.89 37.46 2.83
3395 4510 6.071952 TGGAACTTCCTTTCATATGAACAAGC 60.072 38.462 17.76 8.26 37.46 4.01
3397 4512 6.506500 ACTTCCTTTCATATGAACAAGCTG 57.493 37.500 17.76 9.20 33.13 4.24
3398 4513 6.240894 ACTTCCTTTCATATGAACAAGCTGA 58.759 36.000 17.76 5.12 33.13 4.26
3399 4514 6.373774 ACTTCCTTTCATATGAACAAGCTGAG 59.626 38.462 17.76 10.30 33.13 3.35
3402 4517 4.592942 TTTCATATGAACAAGCTGAGGCT 58.407 39.130 17.76 0.00 41.42 4.58
3430 5530 5.278604 ACAAAATTACCTGTGTTCGAAAGC 58.721 37.500 0.00 0.00 0.00 3.51
3438 5538 3.004734 CCTGTGTTCGAAAGCTGGAAATT 59.995 43.478 16.10 0.00 0.00 1.82
3440 5540 5.356882 TGTGTTCGAAAGCTGGAAATTAG 57.643 39.130 0.00 0.00 0.00 1.73
3441 5541 4.819630 TGTGTTCGAAAGCTGGAAATTAGT 59.180 37.500 0.00 0.00 0.00 2.24
3442 5542 5.049680 TGTGTTCGAAAGCTGGAAATTAGTC 60.050 40.000 0.00 0.00 0.00 2.59
3443 5543 5.179555 GTGTTCGAAAGCTGGAAATTAGTCT 59.820 40.000 0.00 0.00 0.00 3.24
3444 5544 5.763204 TGTTCGAAAGCTGGAAATTAGTCTT 59.237 36.000 0.00 0.00 0.00 3.01
3447 5547 4.083324 CGAAAGCTGGAAATTAGTCTTGCA 60.083 41.667 0.00 0.00 0.00 4.08
3453 5562 5.586243 GCTGGAAATTAGTCTTGCATACTCA 59.414 40.000 5.56 0.00 0.00 3.41
3504 5620 2.093816 TCTGAAGACGCATGAGCTGAAT 60.094 45.455 0.00 0.00 39.10 2.57
3543 5659 1.585006 CTCCGACTACAGCAACGGT 59.415 57.895 0.00 0.00 44.72 4.83
3719 5867 3.415212 CAACTTGCAGGAGAATGAAGGA 58.585 45.455 1.40 0.00 0.00 3.36
3771 5932 3.316573 GACTGAAGGGCCCGGTGAG 62.317 68.421 18.44 14.87 0.00 3.51
3874 6035 3.038280 TCAGTGGGACAAGAAGTTCAGA 58.962 45.455 5.50 0.00 44.16 3.27
3880 6041 4.838423 TGGGACAAGAAGTTCAGACAGATA 59.162 41.667 5.50 0.00 31.92 1.98
3943 6108 3.865745 CGCCGTCTGAAGATGTTCTTATT 59.134 43.478 4.03 0.00 36.73 1.40
3944 6109 4.026475 CGCCGTCTGAAGATGTTCTTATTC 60.026 45.833 4.03 0.00 36.73 1.75
3945 6110 5.112686 GCCGTCTGAAGATGTTCTTATTCT 58.887 41.667 4.03 0.00 36.73 2.40
3948 6113 7.254151 GCCGTCTGAAGATGTTCTTATTCTTAC 60.254 40.741 4.03 0.00 36.73 2.34
3950 6115 9.140286 CGTCTGAAGATGTTCTTATTCTTACAA 57.860 33.333 4.03 0.00 36.73 2.41
3952 6117 9.155975 TCTGAAGATGTTCTTATTCTTACAAGC 57.844 33.333 4.03 0.00 36.73 4.01
3953 6118 8.846943 TGAAGATGTTCTTATTCTTACAAGCA 57.153 30.769 4.03 0.00 36.73 3.91
3954 6119 9.283768 TGAAGATGTTCTTATTCTTACAAGCAA 57.716 29.630 4.03 0.00 36.73 3.91
3956 6121 7.756558 AGATGTTCTTATTCTTACAAGCAAGC 58.243 34.615 0.00 0.00 0.00 4.01
3989 6158 3.498397 ACAGAAGTTATTGTTGGCGACTG 59.502 43.478 6.41 0.00 0.00 3.51
4090 6262 2.529744 GGTGGTGCAGGAGAAGGGT 61.530 63.158 0.00 0.00 0.00 4.34
4357 6589 4.090090 TCTCGTTCTTCTCTTCAGGGATT 58.910 43.478 0.00 0.00 0.00 3.01
4489 6721 3.712881 GGCGTGCACTTCACCGAC 61.713 66.667 16.19 0.00 42.69 4.79
4594 6826 2.345124 GCTCCAAGAAGCCATCATCT 57.655 50.000 0.00 0.00 36.22 2.90
4611 6843 4.439968 TCATCTGTGTCTTGATGCTCATC 58.560 43.478 3.03 3.03 39.69 2.92
4612 6844 3.967332 TCTGTGTCTTGATGCTCATCA 57.033 42.857 8.37 8.37 45.30 3.07
4665 6897 5.184479 GGCCGGGTCTTACTTTAAAAAGAAT 59.816 40.000 2.18 0.00 39.31 2.40
4670 6902 8.139350 CGGGTCTTACTTTAAAAAGAATGGTTT 58.861 33.333 9.37 0.00 39.31 3.27
4750 6984 5.070313 TGGTGAAGATCAATCCATACGATGA 59.930 40.000 0.00 0.00 0.00 2.92
4769 7003 2.159057 TGACCACGATGGATGATGTGAG 60.159 50.000 10.46 0.00 40.96 3.51
4779 7013 6.456047 CGATGGATGATGTGAGTGTTGTAAAG 60.456 42.308 0.00 0.00 0.00 1.85
4782 7016 5.122396 GGATGATGTGAGTGTTGTAAAGGTC 59.878 44.000 0.00 0.00 0.00 3.85
4819 7053 3.756434 GCTCCTTGTACACAATAGGCAAA 59.244 43.478 6.46 0.00 35.02 3.68
4850 7084 5.333875 CCTCGGCTACAAGTAAAAAGTTGTC 60.334 44.000 2.04 0.00 37.96 3.18
4854 7088 6.089820 CGGCTACAAGTAAAAAGTTGTCGATA 59.910 38.462 2.04 0.00 38.10 2.92
4857 7091 9.821662 GCTACAAGTAAAAAGTTGTCGATATTT 57.178 29.630 2.04 0.00 37.96 1.40
4929 7167 1.031571 ACAATGTATGTGGCGGCTGG 61.032 55.000 11.43 0.00 41.93 4.85
4947 7190 2.995283 TGGGATTTCACAGAGCTCATG 58.005 47.619 17.77 13.86 0.00 3.07
4953 7196 5.860716 GGATTTCACAGAGCTCATGAAAAAC 59.139 40.000 32.60 28.36 43.50 2.43
5162 8233 5.278964 TCGACTCCGAGATTCGTATATTG 57.721 43.478 1.33 0.00 40.30 1.90
5165 8236 5.333875 CGACTCCGAGATTCGTATATTGTCA 60.334 44.000 1.33 0.00 38.40 3.58
5168 8239 5.161358 TCCGAGATTCGTATATTGTCATGC 58.839 41.667 0.00 0.00 38.40 4.06
5196 9490 0.592247 GACACACTTTGGTGCAAGCG 60.592 55.000 0.00 0.00 46.57 4.68
5271 9571 3.812609 ACACAATAGAATCGCACACACAA 59.187 39.130 0.00 0.00 0.00 3.33
5280 9580 4.829064 ATCGCACACACAAACACTATTT 57.171 36.364 0.00 0.00 0.00 1.40
5295 9595 6.299805 ACACTATTTCTATGAGCACCTTCA 57.700 37.500 0.00 0.00 0.00 3.02
5325 9625 1.747206 GCCGGCACACCATCTTAAGAT 60.747 52.381 24.80 12.37 34.57 2.40
5384 9690 5.180680 TCTTCTCTCACTAAACGAACATCGA 59.819 40.000 6.78 0.00 43.74 3.59
5405 9711 5.860182 TCGACGGATAGCCTAAAATTAATCG 59.140 40.000 0.00 0.00 0.00 3.34
5426 9732 3.378112 CGAAGAAAATGCAAGCCCTGATA 59.622 43.478 0.00 0.00 0.00 2.15
5520 9826 5.567037 TGAAGAGGTCCTTTGAATCTTCA 57.433 39.130 12.65 12.65 44.83 3.02
5527 9833 4.158579 GGTCCTTTGAATCTTCAATCCACC 59.841 45.833 6.21 8.34 45.65 4.61
5528 9834 4.766891 GTCCTTTGAATCTTCAATCCACCA 59.233 41.667 6.21 0.00 45.65 4.17
5535 9841 4.849813 ATCTTCAATCCACCATCACTCA 57.150 40.909 0.00 0.00 0.00 3.41
5537 9843 5.183530 TCTTCAATCCACCATCACTCATT 57.816 39.130 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 3.838317 GGGCAGGAAAAGGAAAAATAGGT 59.162 43.478 0.00 0.00 0.00 3.08
48 50 3.009143 GGTTCTTCCTTCTTCCTTGCCTA 59.991 47.826 0.00 0.00 0.00 3.93
62 64 3.069778 AGCCAGACGGGTTCTTCC 58.930 61.111 0.00 0.00 41.43 3.46
70 72 2.966309 GCGAAACCAAGCCAGACGG 61.966 63.158 0.00 0.00 0.00 4.79
71 73 1.577328 ATGCGAAACCAAGCCAGACG 61.577 55.000 0.00 0.00 0.00 4.18
72 74 0.598065 AATGCGAAACCAAGCCAGAC 59.402 50.000 0.00 0.00 0.00 3.51
113 115 7.228706 AGAGTTGTAATTTGATCGAACCTTGTT 59.771 33.333 0.00 0.00 0.00 2.83
118 120 5.324697 GCAGAGTTGTAATTTGATCGAACC 58.675 41.667 0.00 0.00 0.00 3.62
138 140 2.579873 CTGGGATGTATTCCTTGGCAG 58.420 52.381 0.00 0.00 44.75 4.85
152 154 1.229131 ATGATGGAACCAGCTGGGAT 58.771 50.000 35.42 24.16 41.15 3.85
153 155 1.002069 AATGATGGAACCAGCTGGGA 58.998 50.000 35.42 17.13 41.15 4.37
234 518 4.337264 AGAAGGGGGAAACTGCATAATT 57.663 40.909 0.00 0.00 0.00 1.40
268 555 1.536907 TCCCCGTTCTGCACCCTAA 60.537 57.895 0.00 0.00 0.00 2.69
271 558 4.717313 GGTCCCCGTTCTGCACCC 62.717 72.222 0.00 0.00 0.00 4.61
276 563 0.320771 CTCAGTTGGTCCCCGTTCTG 60.321 60.000 0.00 0.00 0.00 3.02
278 565 1.003718 CCTCAGTTGGTCCCCGTTC 60.004 63.158 0.00 0.00 0.00 3.95
279 566 1.768888 ACCTCAGTTGGTCCCCGTT 60.769 57.895 0.00 0.00 34.86 4.44
286 573 1.228063 CAGCAGCACCTCAGTTGGT 60.228 57.895 0.00 0.00 41.77 3.67
287 574 2.623915 GCAGCAGCACCTCAGTTGG 61.624 63.158 0.00 0.00 41.58 3.77
288 575 0.321034 TAGCAGCAGCACCTCAGTTG 60.321 55.000 3.17 0.00 45.49 3.16
289 576 0.397941 TTAGCAGCAGCACCTCAGTT 59.602 50.000 3.17 0.00 45.49 3.16
290 577 0.036577 CTTAGCAGCAGCACCTCAGT 60.037 55.000 3.17 0.00 45.49 3.41
292 579 1.194121 TCCTTAGCAGCAGCACCTCA 61.194 55.000 3.17 0.00 45.49 3.86
293 580 0.742635 GTCCTTAGCAGCAGCACCTC 60.743 60.000 3.17 0.00 45.49 3.85
294 581 1.197430 AGTCCTTAGCAGCAGCACCT 61.197 55.000 3.17 0.00 45.49 4.00
295 582 0.537188 TAGTCCTTAGCAGCAGCACC 59.463 55.000 3.17 0.00 45.49 5.01
296 583 1.478510 TCTAGTCCTTAGCAGCAGCAC 59.521 52.381 3.17 0.00 45.49 4.40
297 584 1.852633 TCTAGTCCTTAGCAGCAGCA 58.147 50.000 3.17 0.00 45.49 4.41
299 586 3.055819 TGGTTTCTAGTCCTTAGCAGCAG 60.056 47.826 0.00 0.00 0.00 4.24
349 642 5.512473 TGCAAATGTACAAGTTTACGGTTC 58.488 37.500 0.00 0.00 0.00 3.62
363 656 3.760738 TCCAATGGTGACTGCAAATGTA 58.239 40.909 0.00 0.00 0.00 2.29
418 712 2.409870 GCAAATGCGGGTGAGGGAG 61.410 63.158 0.00 0.00 0.00 4.30
419 713 2.361104 GCAAATGCGGGTGAGGGA 60.361 61.111 0.00 0.00 0.00 4.20
427 721 5.440229 CGTTTTCAAACTCGCAAATGCGG 62.440 47.826 25.51 18.40 46.76 5.69
429 723 2.533942 ACGTTTTCAAACTCGCAAATGC 59.466 40.909 0.00 0.00 36.77 3.56
486 780 1.075600 GGAGGAGAGGTGGGGAGAG 60.076 68.421 0.00 0.00 0.00 3.20
511 805 0.301687 GCGTAGATGGCAACGACATG 59.698 55.000 13.89 0.00 41.55 3.21
513 807 1.803922 CGCGTAGATGGCAACGACA 60.804 57.895 13.89 0.00 41.55 4.35
516 810 1.631072 CTTCGCGTAGATGGCAACG 59.369 57.895 6.96 5.86 41.92 4.10
517 811 1.348594 GCTTCGCGTAGATGGCAAC 59.651 57.895 17.53 0.00 0.00 4.17
518 812 1.813753 GGCTTCGCGTAGATGGCAA 60.814 57.895 17.53 0.00 45.16 4.52
533 1238 1.615392 GAAGTGATTGCTGGTTTGGCT 59.385 47.619 0.00 0.00 0.00 4.75
542 1247 6.381801 CGTTAAATTTCAGGAAGTGATTGCT 58.618 36.000 0.00 0.00 34.17 3.91
553 1258 5.447624 AGAAACACCCGTTAAATTTCAGG 57.552 39.130 0.00 0.00 33.99 3.86
605 1320 2.878406 TGTTTTAGAGTGGCAGTGAAGC 59.122 45.455 0.00 0.00 0.00 3.86
608 1323 3.838244 AGTGTTTTAGAGTGGCAGTGA 57.162 42.857 0.00 0.00 0.00 3.41
609 1324 3.548818 GCAAGTGTTTTAGAGTGGCAGTG 60.549 47.826 0.00 0.00 0.00 3.66
611 1326 2.880890 AGCAAGTGTTTTAGAGTGGCAG 59.119 45.455 0.00 0.00 0.00 4.85
612 1327 2.878406 GAGCAAGTGTTTTAGAGTGGCA 59.122 45.455 0.00 0.00 0.00 4.92
613 1328 2.096218 CGAGCAAGTGTTTTAGAGTGGC 60.096 50.000 0.00 0.00 0.00 5.01
614 1329 2.480419 CCGAGCAAGTGTTTTAGAGTGG 59.520 50.000 0.00 0.00 0.00 4.00
615 1330 3.131396 ACCGAGCAAGTGTTTTAGAGTG 58.869 45.455 0.00 0.00 0.00 3.51
616 1331 3.470645 ACCGAGCAAGTGTTTTAGAGT 57.529 42.857 0.00 0.00 0.00 3.24
617 1332 3.807622 TGAACCGAGCAAGTGTTTTAGAG 59.192 43.478 0.00 0.00 0.00 2.43
618 1333 3.558418 GTGAACCGAGCAAGTGTTTTAGA 59.442 43.478 0.00 0.00 0.00 2.10
619 1334 3.311322 TGTGAACCGAGCAAGTGTTTTAG 59.689 43.478 0.00 0.00 0.00 1.85
620 1335 3.271729 TGTGAACCGAGCAAGTGTTTTA 58.728 40.909 0.00 0.00 0.00 1.52
621 1336 2.088423 TGTGAACCGAGCAAGTGTTTT 58.912 42.857 0.00 0.00 0.00 2.43
622 1337 1.745232 TGTGAACCGAGCAAGTGTTT 58.255 45.000 0.00 0.00 0.00 2.83
623 1338 1.745232 TTGTGAACCGAGCAAGTGTT 58.255 45.000 0.00 0.00 0.00 3.32
624 1339 1.745232 TTTGTGAACCGAGCAAGTGT 58.255 45.000 0.00 0.00 0.00 3.55
625 1340 3.354089 AATTTGTGAACCGAGCAAGTG 57.646 42.857 0.00 0.00 0.00 3.16
626 1341 5.298276 TCTTAAATTTGTGAACCGAGCAAGT 59.702 36.000 0.00 0.00 0.00 3.16
627 1342 5.625311 GTCTTAAATTTGTGAACCGAGCAAG 59.375 40.000 0.00 0.00 0.00 4.01
628 1343 5.516090 GTCTTAAATTTGTGAACCGAGCAA 58.484 37.500 0.00 0.00 0.00 3.91
629 1344 4.319190 CGTCTTAAATTTGTGAACCGAGCA 60.319 41.667 0.00 0.00 0.00 4.26
630 1345 4.148891 CGTCTTAAATTTGTGAACCGAGC 58.851 43.478 0.00 0.00 0.00 5.03
631 1346 5.338614 ACGTCTTAAATTTGTGAACCGAG 57.661 39.130 0.00 0.00 0.00 4.63
632 1347 5.738118 AACGTCTTAAATTTGTGAACCGA 57.262 34.783 0.00 0.00 0.00 4.69
633 1348 6.291374 CCAAAACGTCTTAAATTTGTGAACCG 60.291 38.462 0.00 3.03 32.29 4.44
634 1349 6.532302 ACCAAAACGTCTTAAATTTGTGAACC 59.468 34.615 0.00 0.00 32.29 3.62
635 1350 7.514573 ACCAAAACGTCTTAAATTTGTGAAC 57.485 32.000 0.00 0.00 32.29 3.18
636 1351 8.535690 AAACCAAAACGTCTTAAATTTGTGAA 57.464 26.923 0.00 0.00 32.29 3.18
637 1352 8.535690 AAAACCAAAACGTCTTAAATTTGTGA 57.464 26.923 0.00 0.00 32.29 3.58
638 1353 9.256715 GAAAAACCAAAACGTCTTAAATTTGTG 57.743 29.630 0.00 0.00 32.29 3.33
639 1354 9.210329 AGAAAAACCAAAACGTCTTAAATTTGT 57.790 25.926 0.00 0.00 32.29 2.83
640 1355 9.471742 CAGAAAAACCAAAACGTCTTAAATTTG 57.528 29.630 0.00 0.00 33.62 2.32
641 1356 9.210329 ACAGAAAAACCAAAACGTCTTAAATTT 57.790 25.926 0.00 0.00 0.00 1.82
642 1357 8.652463 CACAGAAAAACCAAAACGTCTTAAATT 58.348 29.630 0.00 0.00 0.00 1.82
643 1358 8.030106 TCACAGAAAAACCAAAACGTCTTAAAT 58.970 29.630 0.00 0.00 0.00 1.40
644 1359 7.326547 GTCACAGAAAAACCAAAACGTCTTAAA 59.673 33.333 0.00 0.00 0.00 1.52
645 1360 6.802834 GTCACAGAAAAACCAAAACGTCTTAA 59.197 34.615 0.00 0.00 0.00 1.85
646 1361 6.149807 AGTCACAGAAAAACCAAAACGTCTTA 59.850 34.615 0.00 0.00 0.00 2.10
647 1362 5.048294 AGTCACAGAAAAACCAAAACGTCTT 60.048 36.000 0.00 0.00 0.00 3.01
648 1363 4.457949 AGTCACAGAAAAACCAAAACGTCT 59.542 37.500 0.00 0.00 0.00 4.18
649 1364 4.729595 AGTCACAGAAAAACCAAAACGTC 58.270 39.130 0.00 0.00 0.00 4.34
650 1365 4.670735 CGAGTCACAGAAAAACCAAAACGT 60.671 41.667 0.00 0.00 0.00 3.99
651 1366 3.783943 CGAGTCACAGAAAAACCAAAACG 59.216 43.478 0.00 0.00 0.00 3.60
652 1367 4.976987 TCGAGTCACAGAAAAACCAAAAC 58.023 39.130 0.00 0.00 0.00 2.43
653 1368 5.630661 TTCGAGTCACAGAAAAACCAAAA 57.369 34.783 0.00 0.00 0.00 2.44
654 1369 5.828299 ATTCGAGTCACAGAAAAACCAAA 57.172 34.783 0.00 0.00 0.00 3.28
655 1370 5.828299 AATTCGAGTCACAGAAAAACCAA 57.172 34.783 0.00 0.00 0.00 3.67
656 1371 5.828299 AAATTCGAGTCACAGAAAAACCA 57.172 34.783 0.00 0.00 0.00 3.67
662 1377 9.731819 GTGTCTATATAAATTCGAGTCACAGAA 57.268 33.333 0.00 0.00 0.00 3.02
663 1378 8.068380 CGTGTCTATATAAATTCGAGTCACAGA 58.932 37.037 0.00 0.00 0.00 3.41
664 1379 7.856398 ACGTGTCTATATAAATTCGAGTCACAG 59.144 37.037 0.00 0.00 0.00 3.66
665 1380 7.700505 ACGTGTCTATATAAATTCGAGTCACA 58.299 34.615 0.00 0.00 0.00 3.58
666 1381 8.557869 AACGTGTCTATATAAATTCGAGTCAC 57.442 34.615 0.00 0.00 0.00 3.67
667 1382 9.577110 AAAACGTGTCTATATAAATTCGAGTCA 57.423 29.630 0.00 0.00 0.00 3.41
668 1383 9.831054 CAAAACGTGTCTATATAAATTCGAGTC 57.169 33.333 0.00 0.00 0.00 3.36
669 1384 8.325997 GCAAAACGTGTCTATATAAATTCGAGT 58.674 33.333 0.00 0.00 0.00 4.18
670 1385 8.540492 AGCAAAACGTGTCTATATAAATTCGAG 58.460 33.333 0.00 0.00 0.00 4.04
671 1386 8.325282 CAGCAAAACGTGTCTATATAAATTCGA 58.675 33.333 0.00 0.00 0.00 3.71
672 1387 8.114290 ACAGCAAAACGTGTCTATATAAATTCG 58.886 33.333 0.00 0.00 0.00 3.34
673 1388 9.210426 CACAGCAAAACGTGTCTATATAAATTC 57.790 33.333 0.00 0.00 0.00 2.17
674 1389 8.726988 ACACAGCAAAACGTGTCTATATAAATT 58.273 29.630 0.00 0.00 42.61 1.82
675 1390 8.263940 ACACAGCAAAACGTGTCTATATAAAT 57.736 30.769 0.00 0.00 42.61 1.40
676 1391 7.661127 ACACAGCAAAACGTGTCTATATAAA 57.339 32.000 0.00 0.00 42.61 1.40
677 1392 7.661127 AACACAGCAAAACGTGTCTATATAA 57.339 32.000 0.00 0.00 45.37 0.98
678 1393 7.171848 ACAAACACAGCAAAACGTGTCTATATA 59.828 33.333 0.00 0.00 45.37 0.86
679 1394 6.017440 ACAAACACAGCAAAACGTGTCTATAT 60.017 34.615 0.00 0.00 45.37 0.86
680 1395 5.294799 ACAAACACAGCAAAACGTGTCTATA 59.705 36.000 0.00 0.00 45.37 1.31
681 1396 4.095782 ACAAACACAGCAAAACGTGTCTAT 59.904 37.500 0.00 0.00 45.37 1.98
682 1397 3.437395 ACAAACACAGCAAAACGTGTCTA 59.563 39.130 0.00 0.00 45.37 2.59
683 1398 2.227865 ACAAACACAGCAAAACGTGTCT 59.772 40.909 0.00 0.00 45.37 3.41
684 1399 2.591133 ACAAACACAGCAAAACGTGTC 58.409 42.857 0.00 0.00 45.37 3.67
686 1401 2.983136 TGAACAAACACAGCAAAACGTG 59.017 40.909 0.00 0.00 39.10 4.49
687 1402 2.983803 GTGAACAAACACAGCAAAACGT 59.016 40.909 0.00 0.00 40.11 3.99
688 1403 3.241701 AGTGAACAAACACAGCAAAACG 58.758 40.909 0.00 0.00 42.45 3.60
689 1404 4.233789 TGAGTGAACAAACACAGCAAAAC 58.766 39.130 0.00 0.00 42.45 2.43
690 1405 4.511617 TGAGTGAACAAACACAGCAAAA 57.488 36.364 0.00 0.00 42.45 2.44
691 1406 4.511617 TTGAGTGAACAAACACAGCAAA 57.488 36.364 0.00 0.00 42.45 3.68
692 1407 4.717233 ATTGAGTGAACAAACACAGCAA 57.283 36.364 0.00 0.00 42.45 3.91
693 1408 4.157472 TGAATTGAGTGAACAAACACAGCA 59.843 37.500 0.00 0.00 42.45 4.41
694 1409 4.671377 TGAATTGAGTGAACAAACACAGC 58.329 39.130 0.00 0.00 42.45 4.40
695 1410 5.883661 ACTGAATTGAGTGAACAAACACAG 58.116 37.500 0.00 0.00 42.45 3.66
696 1411 5.895636 ACTGAATTGAGTGAACAAACACA 57.104 34.783 0.00 0.00 42.45 3.72
697 1412 6.321717 TGAACTGAATTGAGTGAACAAACAC 58.678 36.000 0.00 0.00 40.60 3.32
698 1413 6.507958 TGAACTGAATTGAGTGAACAAACA 57.492 33.333 0.00 0.00 33.44 2.83
699 1414 9.121517 CATATGAACTGAATTGAGTGAACAAAC 57.878 33.333 0.00 0.00 33.44 2.93
700 1415 7.809331 GCATATGAACTGAATTGAGTGAACAAA 59.191 33.333 6.97 0.00 33.44 2.83
701 1416 7.307694 GCATATGAACTGAATTGAGTGAACAA 58.692 34.615 6.97 0.00 0.00 2.83
702 1417 6.402442 CGCATATGAACTGAATTGAGTGAACA 60.402 38.462 6.97 0.68 0.00 3.18
703 1418 5.961843 CGCATATGAACTGAATTGAGTGAAC 59.038 40.000 6.97 0.00 0.00 3.18
704 1419 5.065090 CCGCATATGAACTGAATTGAGTGAA 59.935 40.000 6.97 0.00 0.00 3.18
705 1420 4.571984 CCGCATATGAACTGAATTGAGTGA 59.428 41.667 6.97 0.00 0.00 3.41
706 1421 4.333649 ACCGCATATGAACTGAATTGAGTG 59.666 41.667 6.97 0.00 0.00 3.51
707 1422 4.517285 ACCGCATATGAACTGAATTGAGT 58.483 39.130 6.97 0.00 0.00 3.41
708 1423 5.065090 TGAACCGCATATGAACTGAATTGAG 59.935 40.000 6.97 0.00 0.00 3.02
709 1424 4.940654 TGAACCGCATATGAACTGAATTGA 59.059 37.500 6.97 0.00 0.00 2.57
710 1425 5.233957 TGAACCGCATATGAACTGAATTG 57.766 39.130 6.97 0.00 0.00 2.32
711 1426 5.357878 ACATGAACCGCATATGAACTGAATT 59.642 36.000 6.97 0.00 34.82 2.17
712 1427 4.883585 ACATGAACCGCATATGAACTGAAT 59.116 37.500 6.97 0.00 34.82 2.57
713 1428 4.260985 ACATGAACCGCATATGAACTGAA 58.739 39.130 6.97 0.00 34.82 3.02
714 1429 3.872696 ACATGAACCGCATATGAACTGA 58.127 40.909 6.97 0.00 34.82 3.41
715 1430 4.621068 AACATGAACCGCATATGAACTG 57.379 40.909 6.97 0.00 34.82 3.16
716 1431 6.751514 TTTAACATGAACCGCATATGAACT 57.248 33.333 6.97 0.00 34.82 3.01
717 1432 7.487829 ACATTTTAACATGAACCGCATATGAAC 59.512 33.333 6.97 0.00 34.82 3.18
718 1433 7.542890 ACATTTTAACATGAACCGCATATGAA 58.457 30.769 6.97 0.00 34.82 2.57
719 1434 7.094508 ACATTTTAACATGAACCGCATATGA 57.905 32.000 6.97 0.00 34.82 2.15
720 1435 7.487509 TGAACATTTTAACATGAACCGCATATG 59.512 33.333 8.57 0.00 34.82 1.78
721 1436 7.542890 TGAACATTTTAACATGAACCGCATAT 58.457 30.769 8.57 0.00 34.82 1.78
722 1437 6.914259 TGAACATTTTAACATGAACCGCATA 58.086 32.000 8.57 0.00 34.82 3.14
723 1438 5.777802 TGAACATTTTAACATGAACCGCAT 58.222 33.333 8.57 0.00 37.85 4.73
724 1439 5.188327 TGAACATTTTAACATGAACCGCA 57.812 34.783 8.57 0.00 0.00 5.69
725 1440 6.517914 TTTGAACATTTTAACATGAACCGC 57.482 33.333 8.57 0.00 0.00 5.68
726 1441 7.899974 TGTTTTGAACATTTTAACATGAACCG 58.100 30.769 8.57 0.00 36.25 4.44
742 1457 9.455847 GCTCCATAAATAGATGATGTTTTGAAC 57.544 33.333 0.00 0.00 0.00 3.18
743 1458 9.187996 TGCTCCATAAATAGATGATGTTTTGAA 57.812 29.630 0.00 0.00 0.00 2.69
744 1459 8.750515 TGCTCCATAAATAGATGATGTTTTGA 57.249 30.769 0.00 0.00 0.00 2.69
745 1460 9.406828 CATGCTCCATAAATAGATGATGTTTTG 57.593 33.333 0.00 0.00 0.00 2.44
746 1461 9.139734 ACATGCTCCATAAATAGATGATGTTTT 57.860 29.630 0.00 0.00 0.00 2.43
747 1462 8.573885 CACATGCTCCATAAATAGATGATGTTT 58.426 33.333 0.00 0.00 0.00 2.83
748 1463 7.309012 GCACATGCTCCATAAATAGATGATGTT 60.309 37.037 0.00 0.00 38.21 2.71
749 1464 6.150641 GCACATGCTCCATAAATAGATGATGT 59.849 38.462 0.00 0.00 38.21 3.06
750 1465 6.150474 TGCACATGCTCCATAAATAGATGATG 59.850 38.462 5.31 0.00 42.66 3.07
751 1466 6.243148 TGCACATGCTCCATAAATAGATGAT 58.757 36.000 5.31 0.00 42.66 2.45
752 1467 5.623169 TGCACATGCTCCATAAATAGATGA 58.377 37.500 5.31 0.00 42.66 2.92
753 1468 5.952526 TGCACATGCTCCATAAATAGATG 57.047 39.130 5.31 0.00 42.66 2.90
754 1469 7.375834 CAATTGCACATGCTCCATAAATAGAT 58.624 34.615 5.31 0.00 42.66 1.98
755 1470 6.239092 CCAATTGCACATGCTCCATAAATAGA 60.239 38.462 5.31 0.00 42.66 1.98
756 1471 5.924254 CCAATTGCACATGCTCCATAAATAG 59.076 40.000 5.31 0.00 42.66 1.73
757 1472 5.363292 ACCAATTGCACATGCTCCATAAATA 59.637 36.000 5.31 0.00 42.66 1.40
758 1473 4.162698 ACCAATTGCACATGCTCCATAAAT 59.837 37.500 5.31 0.00 42.66 1.40
759 1474 3.514706 ACCAATTGCACATGCTCCATAAA 59.485 39.130 5.31 0.00 42.66 1.40
760 1475 3.098377 ACCAATTGCACATGCTCCATAA 58.902 40.909 5.31 0.00 42.66 1.90
761 1476 2.427812 CACCAATTGCACATGCTCCATA 59.572 45.455 5.31 0.00 42.66 2.74
762 1477 1.206132 CACCAATTGCACATGCTCCAT 59.794 47.619 5.31 0.00 42.66 3.41
763 1478 0.604073 CACCAATTGCACATGCTCCA 59.396 50.000 5.31 0.00 42.66 3.86
764 1479 0.108520 CCACCAATTGCACATGCTCC 60.109 55.000 5.31 0.00 42.66 4.70
765 1480 0.738412 GCCACCAATTGCACATGCTC 60.738 55.000 5.31 0.00 42.66 4.26
766 1481 1.189524 AGCCACCAATTGCACATGCT 61.190 50.000 5.31 0.37 42.66 3.79
767 1482 0.738412 GAGCCACCAATTGCACATGC 60.738 55.000 0.00 0.00 42.50 4.06
768 1483 0.108520 GGAGCCACCAATTGCACATG 60.109 55.000 0.00 0.00 38.79 3.21
771 1486 3.776158 TGGAGCCACCAATTGCAC 58.224 55.556 0.00 0.00 46.75 4.57
836 1552 7.509141 TTCACAGTGCATCTTCTGAAATTAA 57.491 32.000 8.88 0.00 35.84 1.40
837 1557 7.509141 TTTCACAGTGCATCTTCTGAAATTA 57.491 32.000 8.88 0.00 35.84 1.40
869 1590 5.749109 CGTATATATGGCGGGATCTTCTTTC 59.251 44.000 0.00 0.00 0.00 2.62
870 1591 5.661458 CGTATATATGGCGGGATCTTCTTT 58.339 41.667 0.00 0.00 0.00 2.52
871 1592 4.441634 GCGTATATATGGCGGGATCTTCTT 60.442 45.833 4.14 0.00 0.00 2.52
872 1593 3.068307 GCGTATATATGGCGGGATCTTCT 59.932 47.826 4.14 0.00 0.00 2.85
876 1597 1.767289 CGCGTATATATGGCGGGATC 58.233 55.000 19.40 0.00 45.69 3.36
933 1654 2.101233 TCTCTCTCACGACGCGAGG 61.101 63.158 15.93 6.33 0.00 4.63
985 1706 4.240103 CATCGATGGCCCCTCGCA 62.240 66.667 17.96 8.93 40.31 5.10
1104 1825 1.444553 CGACAGGAAGGTGAGCGAC 60.445 63.158 0.00 0.00 0.00 5.19
1199 1920 4.388499 CTACCACCCGTGCCGCTT 62.388 66.667 0.00 0.00 0.00 4.68
1246 1976 4.214327 CTCCTTCTCCGGCTCCGC 62.214 72.222 0.00 0.00 38.24 5.54
1365 2101 4.371417 TAGGTGCGTCCCTCGGGT 62.371 66.667 1.18 0.00 40.26 5.28
1368 2104 1.139095 GAAGTAGGTGCGTCCCTCG 59.861 63.158 0.00 0.00 43.12 4.63
1374 2110 4.430765 CGGCGGAAGTAGGTGCGT 62.431 66.667 0.00 0.00 34.45 5.24
1526 2264 8.421249 ACAAGTAATCTGGAATTTGGAATTCA 57.579 30.769 7.93 0.00 0.00 2.57
1545 2283 4.174009 GACGAGCAGCTGATAAACAAGTA 58.826 43.478 20.43 0.00 0.00 2.24
1547 2285 2.995939 TGACGAGCAGCTGATAAACAAG 59.004 45.455 20.43 1.71 0.00 3.16
1549 2287 2.741759 TGACGAGCAGCTGATAAACA 57.258 45.000 20.43 9.11 0.00 2.83
1550 2288 3.190079 TGATGACGAGCAGCTGATAAAC 58.810 45.455 20.43 6.35 33.04 2.01
1552 2290 3.525268 TTGATGACGAGCAGCTGATAA 57.475 42.857 20.43 0.00 33.04 1.75
1553 2291 3.740631 ATTGATGACGAGCAGCTGATA 57.259 42.857 20.43 0.00 33.04 2.15
1554 2292 2.616634 ATTGATGACGAGCAGCTGAT 57.383 45.000 20.43 12.64 33.04 2.90
1555 2293 2.391616 AATTGATGACGAGCAGCTGA 57.608 45.000 20.43 0.00 33.04 4.26
1556 2294 2.417586 TCAAATTGATGACGAGCAGCTG 59.582 45.455 10.11 10.11 33.04 4.24
1609 2353 5.149973 TCATGTGCAATTTAGCCATGTTT 57.850 34.783 10.04 0.00 40.69 2.83
1723 2467 0.100146 CCGGCTACGTACAGAGTTCC 59.900 60.000 0.00 0.00 38.78 3.62
1724 2468 0.525029 GCCGGCTACGTACAGAGTTC 60.525 60.000 22.15 0.00 38.78 3.01
1875 2619 2.517450 GCACATGCTCGCGACTACC 61.517 63.158 3.71 0.00 38.21 3.18
1894 2638 5.968676 ATCAGCCATTGTTAGGTTAGGTA 57.031 39.130 0.00 0.00 0.00 3.08
1899 2645 3.769300 GGGAAATCAGCCATTGTTAGGTT 59.231 43.478 0.00 0.00 0.00 3.50
1944 2690 1.204146 CTTTCTCTCCCCCGATTGGA 58.796 55.000 0.00 0.00 37.49 3.53
1952 2698 4.374689 AGGTTTCTTTCTTTCTCTCCCC 57.625 45.455 0.00 0.00 0.00 4.81
1954 2700 6.399743 ACGATAGGTTTCTTTCTTTCTCTCC 58.600 40.000 0.00 0.00 43.77 3.71
1979 2727 5.408604 ACGACTAGCAGGTCAAAATTACAAG 59.591 40.000 9.20 0.00 36.12 3.16
2110 3165 7.872993 TTTGTCTCCACAGAGATAAACAACTAG 59.127 37.037 9.94 0.00 46.92 2.57
2111 3166 7.732025 TTTGTCTCCACAGAGATAAACAACTA 58.268 34.615 9.94 0.00 46.92 2.24
2112 3167 6.591935 TTTGTCTCCACAGAGATAAACAACT 58.408 36.000 9.94 0.00 46.92 3.16
2167 3222 1.009829 CGTTGCATAGCTTCACCCTC 58.990 55.000 0.00 0.00 0.00 4.30
2218 3273 7.889589 TTTAGTTTTACCGAGGTAGCTTTAC 57.110 36.000 0.00 0.00 31.71 2.01
2219 3274 8.900983 TTTTTAGTTTTACCGAGGTAGCTTTA 57.099 30.769 0.00 0.00 31.71 1.85
2220 3275 7.716560 TCTTTTTAGTTTTACCGAGGTAGCTTT 59.283 33.333 0.00 0.00 31.71 3.51
2239 3298 3.075884 ACGCCGTGCCTAATTCTTTTTA 58.924 40.909 0.00 0.00 0.00 1.52
2242 3301 1.530323 AACGCCGTGCCTAATTCTTT 58.470 45.000 0.00 0.00 0.00 2.52
2243 3302 1.530323 AAACGCCGTGCCTAATTCTT 58.470 45.000 0.00 0.00 0.00 2.52
2246 3305 0.730840 GCTAAACGCCGTGCCTAATT 59.269 50.000 0.00 0.00 0.00 1.40
2247 3306 1.426041 CGCTAAACGCCGTGCCTAAT 61.426 55.000 0.00 0.00 34.21 1.73
2248 3307 2.095847 CGCTAAACGCCGTGCCTAA 61.096 57.895 0.00 0.00 34.21 2.69
2249 3308 2.507547 CGCTAAACGCCGTGCCTA 60.508 61.111 0.00 0.00 34.21 3.93
2344 3433 3.932710 CTGCACGCTTTGGTTAAGATCTA 59.067 43.478 0.00 0.00 35.80 1.98
2345 3434 2.744202 CTGCACGCTTTGGTTAAGATCT 59.256 45.455 0.00 0.00 35.80 2.75
2346 3435 2.742053 TCTGCACGCTTTGGTTAAGATC 59.258 45.455 0.00 0.00 35.80 2.75
2382 3476 1.384989 TTGGAGCGGCCGTTTCAAAA 61.385 50.000 30.79 19.76 40.66 2.44
2392 3486 3.512516 GGCTGTGATTGGAGCGGC 61.513 66.667 0.00 0.00 35.95 6.53
2467 3569 0.947244 GTTGACCCAGCAACTGACAG 59.053 55.000 0.00 0.00 43.60 3.51
2471 3573 0.664761 CTGTGTTGACCCAGCAACTG 59.335 55.000 0.00 0.00 46.31 3.16
2472 3574 0.255890 ACTGTGTTGACCCAGCAACT 59.744 50.000 0.00 0.00 46.31 3.16
2546 3648 3.661648 GGGATGTGGCTGGTGGGT 61.662 66.667 0.00 0.00 0.00 4.51
2547 3649 3.660571 TGGGATGTGGCTGGTGGG 61.661 66.667 0.00 0.00 0.00 4.61
2652 3754 7.545265 AGCAAACATAACGCAACATGAATTAAT 59.455 29.630 0.00 0.00 0.00 1.40
2653 3755 6.865726 AGCAAACATAACGCAACATGAATTAA 59.134 30.769 0.00 0.00 0.00 1.40
2679 3781 0.247537 GGATAAAGTTTGACCGCGCG 60.248 55.000 25.67 25.67 0.00 6.86
2680 3782 0.800012 TGGATAAAGTTTGACCGCGC 59.200 50.000 0.00 0.00 0.00 6.86
2681 3783 1.129811 GGTGGATAAAGTTTGACCGCG 59.870 52.381 0.00 0.00 32.73 6.46
2682 3784 2.161609 CAGGTGGATAAAGTTTGACCGC 59.838 50.000 14.10 14.10 0.00 5.68
2718 3820 6.265577 CGGAAATGATTCTTAAACATCCCAC 58.734 40.000 0.00 0.00 35.79 4.61
2724 3826 4.082463 GTGGGCGGAAATGATTCTTAAACA 60.082 41.667 0.00 0.00 35.79 2.83
2918 4030 3.058432 GGCATGCACAGATCACATATCAC 60.058 47.826 21.36 0.00 0.00 3.06
2923 4035 0.257905 AGGGCATGCACAGATCACAT 59.742 50.000 24.51 0.00 0.00 3.21
2945 4057 9.906660 TTGTGATATAAATTCGCTCAAAAACTT 57.093 25.926 0.00 0.00 0.00 2.66
2948 4060 8.806634 GCATTGTGATATAAATTCGCTCAAAAA 58.193 29.630 0.00 0.00 0.00 1.94
2953 4065 9.831737 AAATAGCATTGTGATATAAATTCGCTC 57.168 29.630 0.00 0.00 27.62 5.03
2998 4112 6.607004 TTTTGAAACTAACCTTCACCCAAA 57.393 33.333 0.00 0.00 32.61 3.28
3020 4134 4.503123 GCTATGCCTTCACCCAAACTTTTT 60.503 41.667 0.00 0.00 0.00 1.94
3021 4135 3.006859 GCTATGCCTTCACCCAAACTTTT 59.993 43.478 0.00 0.00 0.00 2.27
3022 4136 2.562738 GCTATGCCTTCACCCAAACTTT 59.437 45.455 0.00 0.00 0.00 2.66
3023 4137 2.171003 GCTATGCCTTCACCCAAACTT 58.829 47.619 0.00 0.00 0.00 2.66
3024 4138 1.839424 GCTATGCCTTCACCCAAACT 58.161 50.000 0.00 0.00 0.00 2.66
3026 4140 0.679640 CCGCTATGCCTTCACCCAAA 60.680 55.000 0.00 0.00 0.00 3.28
3027 4141 1.077787 CCGCTATGCCTTCACCCAA 60.078 57.895 0.00 0.00 0.00 4.12
3028 4142 2.297895 ACCGCTATGCCTTCACCCA 61.298 57.895 0.00 0.00 0.00 4.51
3029 4143 1.819632 CACCGCTATGCCTTCACCC 60.820 63.158 0.00 0.00 0.00 4.61
3030 4144 1.090052 GTCACCGCTATGCCTTCACC 61.090 60.000 0.00 0.00 0.00 4.02
3031 4145 0.391130 TGTCACCGCTATGCCTTCAC 60.391 55.000 0.00 0.00 0.00 3.18
3033 4147 1.668419 AATGTCACCGCTATGCCTTC 58.332 50.000 0.00 0.00 0.00 3.46
3035 4149 3.275617 TTTAATGTCACCGCTATGCCT 57.724 42.857 0.00 0.00 0.00 4.75
3036 4150 3.563808 TGATTTAATGTCACCGCTATGCC 59.436 43.478 0.00 0.00 0.00 4.40
3037 4151 4.511454 TCTGATTTAATGTCACCGCTATGC 59.489 41.667 0.00 0.00 0.00 3.14
3038 4152 6.603237 TTCTGATTTAATGTCACCGCTATG 57.397 37.500 0.00 0.00 0.00 2.23
3039 4153 8.367911 TCTATTCTGATTTAATGTCACCGCTAT 58.632 33.333 0.00 0.00 0.00 2.97
3040 4154 7.722363 TCTATTCTGATTTAATGTCACCGCTA 58.278 34.615 0.00 0.00 0.00 4.26
3041 4155 6.582636 TCTATTCTGATTTAATGTCACCGCT 58.417 36.000 0.00 0.00 0.00 5.52
3042 4156 6.844696 TCTATTCTGATTTAATGTCACCGC 57.155 37.500 0.00 0.00 0.00 5.68
3043 4157 7.852945 GCTTTCTATTCTGATTTAATGTCACCG 59.147 37.037 0.00 0.00 0.00 4.94
3044 4158 8.677300 TGCTTTCTATTCTGATTTAATGTCACC 58.323 33.333 0.00 0.00 0.00 4.02
3083 4197 7.660112 TGTTGAAGCTTTCATGACAAACATAT 58.340 30.769 0.00 0.00 39.84 1.78
3164 4279 5.188434 CACCATGTGTATCTCAACCATCTT 58.812 41.667 0.00 0.00 0.00 2.40
3233 4348 5.411361 TGTCACAACCATATGCTACAGAAAC 59.589 40.000 0.00 0.00 0.00 2.78
3236 4351 4.466015 TCTGTCACAACCATATGCTACAGA 59.534 41.667 0.00 6.57 40.33 3.41
3250 4365 4.450757 CACAACCGAATGTATCTGTCACAA 59.549 41.667 0.00 0.00 30.84 3.33
3284 4399 3.071479 GGACAGCTCGTTAATCAAACCA 58.929 45.455 0.00 0.00 34.33 3.67
3332 4447 4.571372 ATTTTCGTAAGTGCCGGAAAAA 57.429 36.364 5.05 0.00 36.47 1.94
3334 4449 3.364167 CGAATTTTCGTAAGTGCCGGAAA 60.364 43.478 5.05 0.00 45.09 3.13
3336 4451 1.727880 CGAATTTTCGTAAGTGCCGGA 59.272 47.619 5.05 0.00 45.09 5.14
3348 4463 5.811100 CCAGACCTACTTCTACCGAATTTTC 59.189 44.000 0.00 0.00 0.00 2.29
3352 4467 4.246712 TCCAGACCTACTTCTACCGAAT 57.753 45.455 0.00 0.00 0.00 3.34
3355 4470 3.354467 AGTTCCAGACCTACTTCTACCG 58.646 50.000 0.00 0.00 0.00 4.02
3356 4471 4.160065 GGAAGTTCCAGACCTACTTCTACC 59.840 50.000 17.44 0.00 44.44 3.18
3360 4475 4.893829 AAGGAAGTTCCAGACCTACTTC 57.106 45.455 23.87 0.00 44.34 3.01
3361 4476 4.658901 TGAAAGGAAGTTCCAGACCTACTT 59.341 41.667 23.87 3.89 39.61 2.24
3362 4477 4.232091 TGAAAGGAAGTTCCAGACCTACT 58.768 43.478 23.87 0.00 39.61 2.57
3363 4478 4.618920 TGAAAGGAAGTTCCAGACCTAC 57.381 45.455 23.87 8.15 39.61 3.18
3364 4479 6.672218 TCATATGAAAGGAAGTTCCAGACCTA 59.328 38.462 23.87 9.78 39.61 3.08
3365 4480 5.488919 TCATATGAAAGGAAGTTCCAGACCT 59.511 40.000 23.87 7.94 39.61 3.85
3366 4481 5.745227 TCATATGAAAGGAAGTTCCAGACC 58.255 41.667 23.87 10.09 39.61 3.85
3367 4482 6.655003 TGTTCATATGAAAGGAAGTTCCAGAC 59.345 38.462 23.87 13.61 39.61 3.51
3368 4483 6.778821 TGTTCATATGAAAGGAAGTTCCAGA 58.221 36.000 23.87 0.50 39.61 3.86
3369 4484 7.452880 TTGTTCATATGAAAGGAAGTTCCAG 57.547 36.000 23.87 3.51 39.61 3.86
3370 4485 6.071952 GCTTGTTCATATGAAAGGAAGTTCCA 60.072 38.462 23.87 7.50 39.61 3.53
3371 4486 6.151817 AGCTTGTTCATATGAAAGGAAGTTCC 59.848 38.462 19.55 14.54 35.58 3.62
3372 4487 7.025963 CAGCTTGTTCATATGAAAGGAAGTTC 58.974 38.462 19.55 5.70 35.58 3.01
3375 4490 6.183360 CCTCAGCTTGTTCATATGAAAGGAAG 60.183 42.308 19.55 19.55 35.58 3.46
3378 4493 4.201990 GCCTCAGCTTGTTCATATGAAAGG 60.202 45.833 19.55 19.43 33.95 3.11
3395 4510 6.879458 ACAGGTAATTTTGTAGTAAGCCTCAG 59.121 38.462 0.00 0.00 0.00 3.35
3397 4512 6.653740 ACACAGGTAATTTTGTAGTAAGCCTC 59.346 38.462 0.00 0.00 0.00 4.70
3398 4513 6.540083 ACACAGGTAATTTTGTAGTAAGCCT 58.460 36.000 0.00 0.00 0.00 4.58
3399 4514 6.812879 ACACAGGTAATTTTGTAGTAAGCC 57.187 37.500 0.00 0.00 0.00 4.35
3402 4517 8.659925 TTCGAACACAGGTAATTTTGTAGTAA 57.340 30.769 0.00 0.00 0.00 2.24
3404 4519 7.556733 TTTCGAACACAGGTAATTTTGTAGT 57.443 32.000 0.00 0.00 0.00 2.73
3405 4520 6.577427 GCTTTCGAACACAGGTAATTTTGTAG 59.423 38.462 0.00 0.00 0.00 2.74
3406 4521 6.261381 AGCTTTCGAACACAGGTAATTTTGTA 59.739 34.615 0.00 0.00 0.00 2.41
3407 4522 5.067283 AGCTTTCGAACACAGGTAATTTTGT 59.933 36.000 0.00 0.00 0.00 2.83
3408 4523 5.399301 CAGCTTTCGAACACAGGTAATTTTG 59.601 40.000 0.00 0.00 0.00 2.44
3409 4524 5.507315 CCAGCTTTCGAACACAGGTAATTTT 60.507 40.000 0.00 0.00 0.00 1.82
3410 4525 4.023193 CCAGCTTTCGAACACAGGTAATTT 60.023 41.667 0.00 0.00 0.00 1.82
3413 5513 2.103432 TCCAGCTTTCGAACACAGGTAA 59.897 45.455 0.00 0.00 0.00 2.85
3430 5530 7.615582 TTGAGTATGCAAGACTAATTTCCAG 57.384 36.000 4.71 0.00 0.00 3.86
3453 5562 5.699143 CCTGGAAAGATGATACCAAGGATT 58.301 41.667 0.00 0.00 31.85 3.01
3504 5620 1.541310 CCACTGCCTTCAGGTACGGA 61.541 60.000 0.00 0.00 44.54 4.69
3543 5659 1.971167 GGCCATGGCGAAGTTGACA 60.971 57.895 29.90 0.00 43.06 3.58
3719 5867 3.735237 ACGACTCTTGTCAGACACATT 57.265 42.857 1.52 0.00 43.06 2.71
3771 5932 1.021920 GTTCTCGAAGCCCTCCTTGC 61.022 60.000 0.00 0.00 32.78 4.01
3874 6035 1.876799 CCGATCTCGCTGACTATCTGT 59.123 52.381 0.00 0.00 38.18 3.41
3880 6041 2.824489 TCGCCGATCTCGCTGACT 60.824 61.111 0.00 0.00 38.18 3.41
3943 6108 2.478894 GCGTAACAGCTTGCTTGTAAGA 59.521 45.455 2.74 0.00 0.00 2.10
3944 6109 2.480419 AGCGTAACAGCTTGCTTGTAAG 59.520 45.455 0.00 0.00 46.80 2.34
3945 6110 2.223144 CAGCGTAACAGCTTGCTTGTAA 59.777 45.455 0.00 0.00 46.80 2.41
3948 6113 0.867746 TCAGCGTAACAGCTTGCTTG 59.132 50.000 0.00 0.00 46.80 4.01
3950 6115 0.249868 TGTCAGCGTAACAGCTTGCT 60.250 50.000 0.00 0.00 46.80 3.91
3951 6116 0.164647 CTGTCAGCGTAACAGCTTGC 59.835 55.000 3.74 0.00 46.80 4.01
3952 6117 1.783284 TCTGTCAGCGTAACAGCTTG 58.217 50.000 10.25 0.00 46.80 4.01
3953 6118 2.224066 ACTTCTGTCAGCGTAACAGCTT 60.224 45.455 10.25 0.00 46.80 3.74
3956 6121 5.405571 ACAATAACTTCTGTCAGCGTAACAG 59.594 40.000 9.15 9.15 44.43 3.16
3989 6158 3.000727 CGTACAGGATCTGGAAAACCAC 58.999 50.000 0.00 0.00 35.51 4.16
4009 6181 2.802667 CTTCCTCGCGCCATTGTCG 61.803 63.158 0.00 0.00 0.00 4.35
4612 6844 3.813166 AGTTCGTGGTTCAATCGTTGATT 59.187 39.130 2.09 0.00 39.84 2.57
4690 6924 4.024218 CCATGATCCATTCGAAGCTTCTTC 60.024 45.833 23.50 9.44 0.00 2.87
4693 6927 3.470709 TCCATGATCCATTCGAAGCTTC 58.529 45.455 16.84 16.84 0.00 3.86
4694 6928 3.565764 TCCATGATCCATTCGAAGCTT 57.434 42.857 0.00 0.00 0.00 3.74
4695 6929 3.072038 TCATCCATGATCCATTCGAAGCT 59.928 43.478 3.35 0.00 0.00 3.74
4696 6930 3.405831 TCATCCATGATCCATTCGAAGC 58.594 45.455 3.35 0.00 0.00 3.86
4702 6936 6.458630 TTATCCACTCATCCATGATCCATT 57.541 37.500 0.00 0.00 36.02 3.16
4750 6984 1.833630 ACTCACATCATCCATCGTGGT 59.166 47.619 4.33 0.00 39.03 4.16
4769 7003 1.069906 CAGCTGCGACCTTTACAACAC 60.070 52.381 0.00 0.00 0.00 3.32
4779 7013 1.503542 CCAACAATCAGCTGCGACC 59.496 57.895 9.47 0.00 0.00 4.79
4782 7016 1.136147 GAGCCAACAATCAGCTGCG 59.864 57.895 9.47 2.18 36.87 5.18
4819 7053 1.333177 CTTGTAGCCGAGGGAGCTAT 58.667 55.000 0.00 0.00 44.25 2.97
4850 7084 6.863126 ACTCCAAAAGTGCAAAGAAAATATCG 59.137 34.615 0.00 0.00 36.65 2.92
4857 7091 8.402798 TCATTATACTCCAAAAGTGCAAAGAA 57.597 30.769 0.00 0.00 39.11 2.52
4859 7093 9.643693 AAATCATTATACTCCAAAAGTGCAAAG 57.356 29.630 0.00 0.00 39.11 2.77
4929 7167 5.633830 TTTTCATGAGCTCTGTGAAATCC 57.366 39.130 30.51 2.56 40.37 3.01
5116 7359 9.534565 CGAGATCATCCTATGAAAGTTAGAAAA 57.465 33.333 0.00 0.00 43.50 2.29
5121 7364 7.040340 GGAGTCGAGATCATCCTATGAAAGTTA 60.040 40.741 0.00 0.00 43.50 2.24
5162 8233 4.248859 AGTGTGTCTGATTACAGCATGAC 58.751 43.478 0.00 0.00 43.17 3.06
5165 8236 4.456911 CCAAAGTGTGTCTGATTACAGCAT 59.543 41.667 0.00 0.00 43.17 3.79
5168 8239 4.319766 GCACCAAAGTGTGTCTGATTACAG 60.320 45.833 0.00 0.00 46.35 2.74
5196 9490 3.482156 TCTTGAGCCCTATGAGATTGC 57.518 47.619 0.00 0.00 0.00 3.56
5257 9557 2.755836 AGTGTTTGTGTGTGCGATTC 57.244 45.000 0.00 0.00 0.00 2.52
5271 9571 6.711277 TGAAGGTGCTCATAGAAATAGTGTT 58.289 36.000 0.00 0.00 0.00 3.32
5280 9580 5.893824 TCAGTATCTTGAAGGTGCTCATAGA 59.106 40.000 0.00 0.00 0.00 1.98
5295 9595 0.108138 GTGTGCCGGCTCAGTATCTT 60.108 55.000 30.26 0.00 0.00 2.40
5325 9625 3.191669 ACGTTTGTGATGACTTCGTCAA 58.808 40.909 2.65 0.00 45.96 3.18
5358 9658 6.021074 CGATGTTCGTTTAGTGAGAGAAGATG 60.021 42.308 0.00 0.00 34.72 2.90
5367 9673 2.226200 TCCGTCGATGTTCGTTTAGTGA 59.774 45.455 3.52 0.00 41.35 3.41
5384 9690 7.439381 TCTTCGATTAATTTTAGGCTATCCGT 58.561 34.615 0.00 0.00 37.47 4.69
5405 9711 3.881937 ATCAGGGCTTGCATTTTCTTC 57.118 42.857 0.00 0.00 0.00 2.87
5476 9782 9.350357 CTTCAATTCACAGGATTCTAAACATTG 57.650 33.333 0.00 0.00 0.00 2.82
5520 9826 6.423776 AAAAACAATGAGTGATGGTGGATT 57.576 33.333 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.