Multiple sequence alignment - TraesCS1A01G104100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G104100 chr1A 100.000 2911 0 0 603 3513 100001832 100004742 0.000000e+00 5376.0
1 TraesCS1A01G104100 chr1A 89.144 1262 107 16 603 1857 100038708 100039946 0.000000e+00 1544.0
2 TraesCS1A01G104100 chr1A 93.502 554 34 1 2068 2621 100040148 100040699 0.000000e+00 822.0
3 TraesCS1A01G104100 chr1A 100.000 280 0 0 1 280 100001230 100001509 5.200000e-143 518.0
4 TraesCS1A01G104100 chr1B 95.513 1248 50 4 603 1847 136063251 136064495 0.000000e+00 1989.0
5 TraesCS1A01G104100 chr1B 96.174 967 37 0 603 1569 134723187 134724153 0.000000e+00 1581.0
6 TraesCS1A01G104100 chr1B 89.074 1263 108 20 603 1845 136167368 136168620 0.000000e+00 1541.0
7 TraesCS1A01G104100 chr1B 92.380 748 37 6 1911 2639 136064505 136065251 0.000000e+00 1048.0
8 TraesCS1A01G104100 chr1B 92.070 744 40 5 1911 2635 134731395 134732138 0.000000e+00 1029.0
9 TraesCS1A01G104100 chr1B 92.857 560 38 1 2068 2627 136168832 136169389 0.000000e+00 811.0
10 TraesCS1A01G104100 chr1B 92.920 339 14 4 2634 2969 136065294 136065625 5.270000e-133 484.0
11 TraesCS1A01G104100 chr1B 97.797 227 5 0 1595 1821 134731147 134731373 3.290000e-105 392.0
12 TraesCS1A01G104100 chr1B 93.725 255 16 0 26 280 134722879 134723133 1.980000e-102 383.0
13 TraesCS1A01G104100 chr1B 88.584 219 17 6 2634 2851 134732189 134732400 3.480000e-65 259.0
14 TraesCS1A01G104100 chr1B 86.010 193 19 1 26 210 136062956 136063148 2.140000e-47 200.0
15 TraesCS1A01G104100 chr1B 92.500 120 8 1 3080 3199 563988918 563988800 1.680000e-38 171.0
16 TraesCS1A01G104100 chr1D 95.827 1222 48 2 603 1821 81366608 81367829 0.000000e+00 1971.0
17 TraesCS1A01G104100 chr1D 89.535 1204 105 13 603 1797 81481443 81482634 0.000000e+00 1506.0
18 TraesCS1A01G104100 chr1D 93.434 731 33 2 1924 2639 81367872 81368602 0.000000e+00 1070.0
19 TraesCS1A01G104100 chr1D 88.904 739 50 12 1911 2621 81482679 81483413 0.000000e+00 881.0
20 TraesCS1A01G104100 chr1D 92.460 252 18 1 26 277 81366302 81366552 3.330000e-95 359.0
21 TraesCS1A01G104100 chr1D 89.583 288 19 7 2684 2970 81368833 81369110 4.310000e-94 355.0
22 TraesCS1A01G104100 chr1D 92.754 69 3 2 2892 2959 308461511 308461578 8.030000e-17 99.0
23 TraesCS1A01G104100 chr4A 92.236 322 16 8 3198 3513 641519222 641518904 6.920000e-122 448.0
24 TraesCS1A01G104100 chr4A 88.194 144 15 2 2984 3125 108771109 108770966 1.680000e-38 171.0
25 TraesCS1A01G104100 chr2A 92.212 321 17 7 3198 3513 104997972 104997655 6.920000e-122 448.0
26 TraesCS1A01G104100 chr2A 91.925 322 17 8 3198 3513 98603029 98602711 3.220000e-120 442.0
27 TraesCS1A01G104100 chr2A 91.250 320 22 6 3198 3513 720557794 720558111 6.970000e-117 431.0
28 TraesCS1A01G104100 chr2A 95.238 63 2 1 2905 2966 659099345 659099407 8.030000e-17 99.0
29 TraesCS1A01G104100 chr7D 91.925 322 18 7 3197 3513 636818044 636817726 8.950000e-121 444.0
30 TraesCS1A01G104100 chr7D 88.406 276 22 7 2634 2907 574011765 574012032 1.220000e-84 324.0
31 TraesCS1A01G104100 chr5D 91.692 325 19 7 3194 3513 515096295 515096616 8.950000e-121 444.0
32 TraesCS1A01G104100 chr6B 91.875 320 20 6 3198 3513 718911895 718912212 3.220000e-120 442.0
33 TraesCS1A01G104100 chr6B 91.250 320 20 8 3198 3513 55691816 55691501 2.510000e-116 429.0
34 TraesCS1A01G104100 chr3D 91.250 320 22 6 3198 3513 569837310 569837627 6.970000e-117 431.0
35 TraesCS1A01G104100 chr3D 82.051 234 34 5 2634 2867 122444346 122444571 3.580000e-45 193.0
36 TraesCS1A01G104100 chr6A 97.826 230 2 1 2968 3197 453556835 453557061 9.140000e-106 394.0
37 TraesCS1A01G104100 chr5A 88.768 276 21 7 2634 2907 640071556 640071289 2.610000e-86 329.0
38 TraesCS1A01G104100 chr7A 88.793 232 26 0 2968 3199 115510728 115510959 5.740000e-73 285.0
39 TraesCS1A01G104100 chr7A 88.186 237 19 4 2964 3199 622947400 622947172 1.240000e-69 274.0
40 TraesCS1A01G104100 chr7A 87.336 229 20 5 2971 3192 109082771 109082997 1.620000e-63 254.0
41 TraesCS1A01G104100 chr6D 85.870 276 29 7 2634 2907 418052449 418052182 5.740000e-73 285.0
42 TraesCS1A01G104100 chr2D 82.051 234 34 5 2634 2867 192318816 192318591 3.580000e-45 193.0
43 TraesCS1A01G104100 chr2D 95.312 64 2 1 2898 2960 492718108 492718045 2.230000e-17 100.0
44 TraesCS1A01G104100 chr3A 98.438 64 1 0 2907 2970 724913708 724913645 2.870000e-21 113.0
45 TraesCS1A01G104100 chr3A 92.857 70 5 0 2902 2971 64303682 64303751 6.200000e-18 102.0
46 TraesCS1A01G104100 chr3A 92.537 67 5 0 2904 2970 233024389 233024455 2.890000e-16 97.1
47 TraesCS1A01G104100 chr2B 92.754 69 5 0 2903 2971 606775450 606775518 2.230000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G104100 chr1A 100001230 100004742 3512 False 2947.00 5376 100.00000 1 3513 2 chr1A.!!$F1 3512
1 TraesCS1A01G104100 chr1A 100038708 100040699 1991 False 1183.00 1544 91.32300 603 2621 2 chr1A.!!$F2 2018
2 TraesCS1A01G104100 chr1B 136167368 136169389 2021 False 1176.00 1541 90.96550 603 2627 2 chr1B.!!$F4 2024
3 TraesCS1A01G104100 chr1B 134722879 134724153 1274 False 982.00 1581 94.94950 26 1569 2 chr1B.!!$F1 1543
4 TraesCS1A01G104100 chr1B 136062956 136065625 2669 False 930.25 1989 91.70575 26 2969 4 chr1B.!!$F3 2943
5 TraesCS1A01G104100 chr1B 134731147 134732400 1253 False 560.00 1029 92.81700 1595 2851 3 chr1B.!!$F2 1256
6 TraesCS1A01G104100 chr1D 81481443 81483413 1970 False 1193.50 1506 89.21950 603 2621 2 chr1D.!!$F3 2018
7 TraesCS1A01G104100 chr1D 81366302 81369110 2808 False 938.75 1971 92.82600 26 2970 4 chr1D.!!$F2 2944

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
760 774 0.667487 CAGCACCGTCACACTAGTGG 60.667 60.0 26.12 15.10 45.91 4.00 F
1896 1928 0.250467 GAGTGACAGTGTGGCCATGT 60.250 55.0 9.72 10.04 0.00 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1907 1939 0.178981 AGCATGGCCACACTGTCTTT 60.179 50.0 8.16 0.0 0.00 2.52 R
3209 3518 0.104855 CCTGCTAGGCATACGCTTCA 59.895 55.0 0.00 0.0 38.13 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.919774 TTAGGACCTCTGGTGCATTTAA 57.080 40.909 10.67 0.00 46.69 1.52
22 23 3.073274 AGGACCTCTGGTGCATTTAAC 57.927 47.619 10.67 0.00 46.69 2.01
23 24 2.644798 AGGACCTCTGGTGCATTTAACT 59.355 45.455 10.67 0.00 46.69 2.24
24 25 3.010420 GGACCTCTGGTGCATTTAACTC 58.990 50.000 3.38 0.00 43.66 3.01
42 43 7.941795 TTAACTCTTCTCGAAAACTAACTGG 57.058 36.000 0.00 0.00 0.00 4.00
46 47 7.668492 ACTCTTCTCGAAAACTAACTGGTTAT 58.332 34.615 0.00 0.00 0.00 1.89
53 54 5.346822 CGAAAACTAACTGGTTATGCGTACT 59.653 40.000 0.00 0.00 0.00 2.73
66 67 6.255453 GGTTATGCGTACTTAAATCCGTGTTA 59.745 38.462 0.00 0.00 0.00 2.41
76 77 8.672823 ACTTAAATCCGTGTTAGAGTTTTCTT 57.327 30.769 0.00 0.00 34.79 2.52
88 97 7.500892 TGTTAGAGTTTTCTTCTGTAATGCCAA 59.499 33.333 0.00 0.00 34.79 4.52
160 169 6.005823 TCACTTGAAGAACCATCACATTCAT 58.994 36.000 0.00 0.00 30.56 2.57
224 238 3.441222 CACCATTTGCAACTCAGCTATCA 59.559 43.478 0.00 0.00 34.99 2.15
662 676 5.972973 CACGAAACTGCATGCAATACATTAT 59.027 36.000 22.88 2.08 36.64 1.28
760 774 0.667487 CAGCACCGTCACACTAGTGG 60.667 60.000 26.12 15.10 45.91 4.00
904 922 6.037172 CCAGAACCGATATTCACCACTTTAAG 59.963 42.308 0.00 0.00 0.00 1.85
1057 1076 1.875009 CTCAGTTCTTGTGCTCTGCA 58.125 50.000 0.00 0.00 35.60 4.41
1244 1263 5.470098 TCAATGTACCTCAAGTTTCTTCTGC 59.530 40.000 0.00 0.00 0.00 4.26
1333 1358 1.878211 TGTATCCAGGGCTGTGATGA 58.122 50.000 0.00 0.00 0.00 2.92
1391 1416 1.610886 GCACTACCCAACCAGAACTCC 60.611 57.143 0.00 0.00 0.00 3.85
1569 1596 9.448438 ACATTCAGCTTGTCATACAAAGTATTA 57.552 29.630 0.00 0.00 37.69 0.98
1570 1597 9.926751 CATTCAGCTTGTCATACAAAGTATTAG 57.073 33.333 0.00 0.00 37.69 1.73
1574 1601 8.818057 CAGCTTGTCATACAAAGTATTAGGTAC 58.182 37.037 0.00 0.00 37.69 3.34
1581 1611 9.192642 TCATACAAAGTATTAGGTACTGCACTA 57.807 33.333 0.00 0.00 42.83 2.74
1651 1681 0.806492 GACGGTCTGAAGGCGAATCC 60.806 60.000 0.00 0.00 0.00 3.01
1821 1853 5.488341 ACGGAAGTGCACAACTAGAATTAT 58.512 37.500 21.04 0.00 46.97 1.28
1822 1854 6.636705 ACGGAAGTGCACAACTAGAATTATA 58.363 36.000 21.04 0.00 46.97 0.98
1823 1855 7.101054 ACGGAAGTGCACAACTAGAATTATAA 58.899 34.615 21.04 0.00 46.97 0.98
1824 1856 7.604927 ACGGAAGTGCACAACTAGAATTATAAA 59.395 33.333 21.04 0.00 46.97 1.40
1825 1857 7.903431 CGGAAGTGCACAACTAGAATTATAAAC 59.097 37.037 21.04 0.00 38.56 2.01
1826 1858 8.182227 GGAAGTGCACAACTAGAATTATAAACC 58.818 37.037 21.04 0.00 38.56 3.27
1827 1859 7.625828 AGTGCACAACTAGAATTATAAACCC 57.374 36.000 21.04 0.00 37.36 4.11
1828 1860 7.402862 AGTGCACAACTAGAATTATAAACCCT 58.597 34.615 21.04 0.00 37.36 4.34
1829 1861 7.336931 AGTGCACAACTAGAATTATAAACCCTG 59.663 37.037 21.04 0.00 37.36 4.45
1830 1862 7.120726 GTGCACAACTAGAATTATAAACCCTGT 59.879 37.037 13.17 0.00 0.00 4.00
1831 1863 7.120579 TGCACAACTAGAATTATAAACCCTGTG 59.879 37.037 0.00 0.00 33.99 3.66
1832 1864 7.472543 CACAACTAGAATTATAAACCCTGTGC 58.527 38.462 0.00 0.00 0.00 4.57
1833 1865 7.336931 CACAACTAGAATTATAAACCCTGTGCT 59.663 37.037 0.00 0.00 0.00 4.40
1834 1866 8.545472 ACAACTAGAATTATAAACCCTGTGCTA 58.455 33.333 0.00 0.00 0.00 3.49
1835 1867 8.827677 CAACTAGAATTATAAACCCTGTGCTAC 58.172 37.037 0.00 0.00 0.00 3.58
1836 1868 8.086143 ACTAGAATTATAAACCCTGTGCTACA 57.914 34.615 0.00 0.00 0.00 2.74
1837 1869 8.714906 ACTAGAATTATAAACCCTGTGCTACAT 58.285 33.333 0.00 0.00 0.00 2.29
1838 1870 9.209175 CTAGAATTATAAACCCTGTGCTACATC 57.791 37.037 0.00 0.00 0.00 3.06
1839 1871 6.998673 AGAATTATAAACCCTGTGCTACATCC 59.001 38.462 0.00 0.00 0.00 3.51
1840 1872 3.577805 ATAAACCCTGTGCTACATCCC 57.422 47.619 0.00 0.00 0.00 3.85
1841 1873 1.372501 AAACCCTGTGCTACATCCCT 58.627 50.000 0.00 0.00 0.00 4.20
1845 1877 1.281867 CCCTGTGCTACATCCCTGAAA 59.718 52.381 0.00 0.00 0.00 2.69
1846 1878 2.290896 CCCTGTGCTACATCCCTGAAAA 60.291 50.000 0.00 0.00 0.00 2.29
1877 1909 3.751175 TGCTACATCCCTGAAAACGAAAG 59.249 43.478 0.00 0.00 0.00 2.62
1896 1928 0.250467 GAGTGACAGTGTGGCCATGT 60.250 55.000 9.72 10.04 0.00 3.21
1898 1930 0.593128 GTGACAGTGTGGCCATGTTC 59.407 55.000 9.72 4.70 0.00 3.18
1899 1931 0.537143 TGACAGTGTGGCCATGTTCC 60.537 55.000 9.72 0.00 0.00 3.62
1900 1932 1.228552 ACAGTGTGGCCATGTTCCC 60.229 57.895 9.72 0.00 0.00 3.97
1901 1933 1.075482 CAGTGTGGCCATGTTCCCT 59.925 57.895 9.72 0.00 0.00 4.20
1902 1934 0.327924 CAGTGTGGCCATGTTCCCTA 59.672 55.000 9.72 0.00 0.00 3.53
1904 1936 1.427368 AGTGTGGCCATGTTCCCTAAA 59.573 47.619 9.72 0.00 0.00 1.85
1905 1937 2.158385 AGTGTGGCCATGTTCCCTAAAA 60.158 45.455 9.72 0.00 0.00 1.52
1906 1938 2.630580 GTGTGGCCATGTTCCCTAAAAA 59.369 45.455 9.72 0.00 0.00 1.94
1972 2015 4.705110 TCTGAAACTTCATCCCTCACAA 57.295 40.909 0.00 0.00 36.46 3.33
1992 2037 6.426328 TCACAAGCAAACTGTCACAAATTTTT 59.574 30.769 0.00 0.00 0.00 1.94
1999 2044 7.224557 GCAAACTGTCACAAATTTTTCATAGGT 59.775 33.333 0.00 0.00 0.00 3.08
2042 2087 4.454678 TGATCTTATGGAATGGAGTGCAC 58.545 43.478 9.40 9.40 0.00 4.57
2239 2336 4.947147 GGCAACCAGACCACCGCA 62.947 66.667 0.00 0.00 0.00 5.69
2290 2387 3.135895 ACAAGCAGTACTACCACAACCTT 59.864 43.478 0.00 0.00 0.00 3.50
2390 2487 1.006220 CTGGTGCAGACGTACAGCA 60.006 57.895 14.45 14.45 41.63 4.41
2419 2516 2.608261 CGAGCAGTTCTTCTCGGACTTT 60.608 50.000 12.48 0.00 45.89 2.66
2458 2555 2.895372 GGGAGCATACCGTTGCCG 60.895 66.667 0.00 0.00 43.83 5.69
2520 2617 1.545582 CAATCCCAAATGAGCAACGGT 59.454 47.619 0.00 0.00 0.00 4.83
2746 3052 1.302949 GGCATCTACCCACAAGCCA 59.697 57.895 0.00 0.00 41.63 4.75
2747 3053 1.032114 GGCATCTACCCACAAGCCAC 61.032 60.000 0.00 0.00 41.63 5.01
2887 3196 2.028561 AATTTGAGGCCATGGTGGTT 57.971 45.000 14.67 0.00 40.46 3.67
2903 3212 2.093711 GTGGTTGTTTTGCAAGTCCCTT 60.094 45.455 0.00 0.00 37.83 3.95
2973 3282 9.698309 TTCATGACTAGAACAAAAAGTAGAGAG 57.302 33.333 0.00 0.00 0.00 3.20
2974 3283 8.861086 TCATGACTAGAACAAAAAGTAGAGAGT 58.139 33.333 0.00 0.00 0.00 3.24
2975 3284 9.482627 CATGACTAGAACAAAAAGTAGAGAGTT 57.517 33.333 0.00 0.00 0.00 3.01
2977 3286 9.886132 TGACTAGAACAAAAAGTAGAGAGTTTT 57.114 29.630 0.00 0.00 39.43 2.43
3005 3314 8.777578 TGGTACATCATACTACCTGAAATAGT 57.222 34.615 0.00 0.00 36.79 2.12
3006 3315 8.638873 TGGTACATCATACTACCTGAAATAGTG 58.361 37.037 0.00 0.00 34.66 2.74
3007 3316 8.857098 GGTACATCATACTACCTGAAATAGTGA 58.143 37.037 0.00 0.00 34.66 3.41
3008 3317 9.900710 GTACATCATACTACCTGAAATAGTGAG 57.099 37.037 0.00 0.00 34.66 3.51
3009 3318 8.540507 ACATCATACTACCTGAAATAGTGAGT 57.459 34.615 0.00 0.00 34.66 3.41
3010 3319 9.642343 ACATCATACTACCTGAAATAGTGAGTA 57.358 33.333 0.00 0.00 34.66 2.59
3012 3321 9.869667 ATCATACTACCTGAAATAGTGAGTAGT 57.130 33.333 5.98 5.98 42.17 2.73
3039 3348 2.936498 GTTGATCCAACGGTCAGTATGG 59.064 50.000 0.00 0.00 34.63 2.74
3040 3349 2.462723 TGATCCAACGGTCAGTATGGA 58.537 47.619 1.26 1.26 41.09 3.41
3041 3350 3.038280 TGATCCAACGGTCAGTATGGAT 58.962 45.455 10.32 10.32 45.08 3.41
3042 3351 3.654414 GATCCAACGGTCAGTATGGATC 58.346 50.000 18.16 18.16 46.81 3.36
3043 3352 1.407618 TCCAACGGTCAGTATGGATCG 59.592 52.381 0.00 0.00 46.50 3.69
3044 3353 1.538204 CCAACGGTCAGTATGGATCGG 60.538 57.143 0.73 0.00 45.41 4.18
3045 3354 1.136305 CAACGGTCAGTATGGATCGGT 59.864 52.381 0.73 0.00 43.23 4.69
3046 3355 1.481871 ACGGTCAGTATGGATCGGTT 58.518 50.000 0.73 0.00 45.41 4.44
3047 3356 2.658285 ACGGTCAGTATGGATCGGTTA 58.342 47.619 0.73 0.00 45.41 2.85
3048 3357 3.228453 ACGGTCAGTATGGATCGGTTAT 58.772 45.455 0.73 0.00 45.41 1.89
3049 3358 3.640029 ACGGTCAGTATGGATCGGTTATT 59.360 43.478 0.73 0.00 45.41 1.40
3050 3359 4.100498 ACGGTCAGTATGGATCGGTTATTT 59.900 41.667 0.73 0.00 45.41 1.40
3051 3360 5.054477 CGGTCAGTATGGATCGGTTATTTT 58.946 41.667 0.00 0.00 37.74 1.82
3052 3361 5.526111 CGGTCAGTATGGATCGGTTATTTTT 59.474 40.000 0.00 0.00 37.74 1.94
3092 3401 9.860393 ATTGGTAATTCCCTATTAGAGGTAGAT 57.140 33.333 0.00 0.00 45.03 1.98
3093 3402 9.684702 TTGGTAATTCCCTATTAGAGGTAGATT 57.315 33.333 0.00 0.00 45.03 2.40
3094 3403 9.684702 TGGTAATTCCCTATTAGAGGTAGATTT 57.315 33.333 0.00 0.00 45.03 2.17
3095 3404 9.945904 GGTAATTCCCTATTAGAGGTAGATTTG 57.054 37.037 0.00 0.00 45.03 2.32
3099 3408 8.855804 TTCCCTATTAGAGGTAGATTTGTTCT 57.144 34.615 0.00 0.00 45.03 3.01
3100 3409 8.855804 TCCCTATTAGAGGTAGATTTGTTCTT 57.144 34.615 0.00 0.00 45.03 2.52
3101 3410 9.280456 TCCCTATTAGAGGTAGATTTGTTCTTT 57.720 33.333 0.00 0.00 45.03 2.52
3142 3451 9.547279 AATTAATTAGATTAATCCCATCCCACC 57.453 33.333 11.92 0.00 42.83 4.61
3143 3452 5.536497 ATTAGATTAATCCCATCCCACCC 57.464 43.478 11.92 0.00 0.00 4.61
3144 3453 1.705186 AGATTAATCCCATCCCACCCG 59.295 52.381 11.92 0.00 0.00 5.28
3145 3454 1.702957 GATTAATCCCATCCCACCCGA 59.297 52.381 3.92 0.00 0.00 5.14
3146 3455 0.841289 TTAATCCCATCCCACCCGAC 59.159 55.000 0.00 0.00 0.00 4.79
3147 3456 1.404479 TAATCCCATCCCACCCGACG 61.404 60.000 0.00 0.00 0.00 5.12
3164 3473 3.568743 GCCGTGTGCGTGTGTTCA 61.569 61.111 0.00 0.00 36.15 3.18
3165 3474 2.323105 CCGTGTGCGTGTGTTCAC 59.677 61.111 0.00 0.00 40.79 3.18
3166 3475 2.456948 CCGTGTGCGTGTGTTCACA 61.457 57.895 1.23 1.23 44.02 3.58
3167 3476 1.641140 CGTGTGCGTGTGTTCACAT 59.359 52.632 8.87 0.00 43.94 3.21
3168 3477 0.383002 CGTGTGCGTGTGTTCACATC 60.383 55.000 8.87 5.34 43.94 3.06
3169 3478 0.655208 GTGTGCGTGTGTTCACATCA 59.345 50.000 8.87 7.61 43.94 3.07
3170 3479 0.936600 TGTGCGTGTGTTCACATCAG 59.063 50.000 8.87 5.54 44.02 2.90
3171 3480 1.217001 GTGCGTGTGTTCACATCAGA 58.783 50.000 8.87 0.00 44.02 3.27
3172 3481 1.800586 GTGCGTGTGTTCACATCAGAT 59.199 47.619 8.87 0.00 44.02 2.90
3173 3482 1.799994 TGCGTGTGTTCACATCAGATG 59.200 47.619 9.03 9.03 44.02 2.90
3174 3483 2.068519 GCGTGTGTTCACATCAGATGA 58.931 47.619 17.81 0.00 44.02 2.92
3175 3484 2.093310 GCGTGTGTTCACATCAGATGAG 59.907 50.000 17.81 9.50 44.02 2.90
3176 3485 2.093310 CGTGTGTTCACATCAGATGAGC 59.907 50.000 17.81 0.00 44.02 4.26
3177 3486 2.093310 GTGTGTTCACATCAGATGAGCG 59.907 50.000 17.81 5.29 43.37 5.03
3178 3487 1.662629 GTGTTCACATCAGATGAGCGG 59.337 52.381 17.81 3.94 30.50 5.52
3179 3488 1.293924 GTTCACATCAGATGAGCGGG 58.706 55.000 17.81 1.61 0.00 6.13
3180 3489 0.904649 TTCACATCAGATGAGCGGGT 59.095 50.000 17.81 0.00 0.00 5.28
3181 3490 0.904649 TCACATCAGATGAGCGGGTT 59.095 50.000 17.81 0.00 0.00 4.11
3182 3491 1.134699 TCACATCAGATGAGCGGGTTC 60.135 52.381 17.81 0.00 0.00 3.62
3183 3492 0.179100 ACATCAGATGAGCGGGTTCG 60.179 55.000 17.81 0.00 39.81 3.95
3193 3502 2.575262 CGGGTTCGCGTACGTCTC 60.575 66.667 17.90 4.59 41.18 3.36
3194 3503 2.873288 GGGTTCGCGTACGTCTCT 59.127 61.111 17.90 0.00 41.18 3.10
3195 3504 1.226239 GGGTTCGCGTACGTCTCTC 60.226 63.158 17.90 4.47 41.18 3.20
3196 3505 1.642952 GGGTTCGCGTACGTCTCTCT 61.643 60.000 17.90 0.00 41.18 3.10
3197 3506 0.167689 GGTTCGCGTACGTCTCTCTT 59.832 55.000 17.90 0.00 41.18 2.85
3198 3507 1.248721 GTTCGCGTACGTCTCTCTTG 58.751 55.000 17.90 0.00 41.18 3.02
3199 3508 1.136141 GTTCGCGTACGTCTCTCTTGA 60.136 52.381 17.90 0.00 41.18 3.02
3200 3509 1.150827 TCGCGTACGTCTCTCTTGAA 58.849 50.000 17.90 0.00 41.18 2.69
3201 3510 1.532437 TCGCGTACGTCTCTCTTGAAA 59.468 47.619 17.90 0.00 41.18 2.69
3202 3511 1.905687 CGCGTACGTCTCTCTTGAAAG 59.094 52.381 17.90 0.00 33.53 2.62
3203 3512 2.412455 CGCGTACGTCTCTCTTGAAAGA 60.412 50.000 17.90 0.00 33.53 2.52
3204 3513 3.728268 CGCGTACGTCTCTCTTGAAAGAT 60.728 47.826 17.90 0.00 32.16 2.40
3205 3514 3.544285 GCGTACGTCTCTCTTGAAAGATG 59.456 47.826 17.90 0.00 33.93 2.90
3206 3515 4.099120 CGTACGTCTCTCTTGAAAGATGG 58.901 47.826 7.22 0.00 33.65 3.51
3207 3516 2.966050 ACGTCTCTCTTGAAAGATGGC 58.034 47.619 0.00 0.00 33.65 4.40
3208 3517 2.564947 ACGTCTCTCTTGAAAGATGGCT 59.435 45.455 0.00 0.00 33.65 4.75
3209 3518 3.007398 ACGTCTCTCTTGAAAGATGGCTT 59.993 43.478 0.00 0.00 33.65 4.35
3210 3519 3.370366 CGTCTCTCTTGAAAGATGGCTTG 59.630 47.826 0.00 0.00 33.79 4.01
3211 3520 4.573900 GTCTCTCTTGAAAGATGGCTTGA 58.426 43.478 0.00 0.00 33.79 3.02
3212 3521 4.999950 GTCTCTCTTGAAAGATGGCTTGAA 59.000 41.667 0.00 0.00 33.79 2.69
3213 3522 5.122082 GTCTCTCTTGAAAGATGGCTTGAAG 59.878 44.000 0.00 0.00 33.79 3.02
3214 3523 3.755378 TCTCTTGAAAGATGGCTTGAAGC 59.245 43.478 9.04 9.04 35.90 3.86
3215 3524 2.485426 TCTTGAAAGATGGCTTGAAGCG 59.515 45.455 11.48 0.00 43.62 4.68
3216 3525 1.896220 TGAAAGATGGCTTGAAGCGT 58.104 45.000 11.48 1.96 43.62 5.07
3217 3526 3.052455 TGAAAGATGGCTTGAAGCGTA 57.948 42.857 11.48 3.04 43.62 4.42
3218 3527 3.609853 TGAAAGATGGCTTGAAGCGTAT 58.390 40.909 11.48 8.13 43.62 3.06
3219 3528 3.374988 TGAAAGATGGCTTGAAGCGTATG 59.625 43.478 11.48 0.00 43.62 2.39
3220 3529 1.303309 AGATGGCTTGAAGCGTATGC 58.697 50.000 11.48 0.00 43.62 3.14
3221 3530 0.308993 GATGGCTTGAAGCGTATGCC 59.691 55.000 11.48 0.00 43.62 4.40
3222 3531 0.107017 ATGGCTTGAAGCGTATGCCT 60.107 50.000 11.48 0.00 43.62 4.75
3223 3532 0.539518 TGGCTTGAAGCGTATGCCTA 59.460 50.000 11.48 0.00 43.62 3.93
3224 3533 1.221414 GGCTTGAAGCGTATGCCTAG 58.779 55.000 11.48 0.00 43.62 3.02
3225 3534 0.583917 GCTTGAAGCGTATGCCTAGC 59.416 55.000 0.00 3.73 44.31 3.42
3226 3535 1.939974 CTTGAAGCGTATGCCTAGCA 58.060 50.000 2.51 0.00 44.31 3.49
3227 3536 1.863454 CTTGAAGCGTATGCCTAGCAG 59.137 52.381 2.51 0.00 43.65 4.24
3228 3537 0.104855 TGAAGCGTATGCCTAGCAGG 59.895 55.000 2.51 0.00 43.65 4.85
3229 3538 0.601311 GAAGCGTATGCCTAGCAGGG 60.601 60.000 2.51 0.00 43.65 4.45
3230 3539 1.048724 AAGCGTATGCCTAGCAGGGA 61.049 55.000 2.51 2.10 43.65 4.20
3231 3540 1.301009 GCGTATGCCTAGCAGGGAC 60.301 63.158 0.00 0.00 43.65 4.46
3232 3541 1.007271 CGTATGCCTAGCAGGGACG 60.007 63.158 6.95 6.95 43.65 4.79
3233 3542 1.301009 GTATGCCTAGCAGGGACGC 60.301 63.158 4.65 0.00 43.65 5.19
3234 3543 2.856628 TATGCCTAGCAGGGACGCG 61.857 63.158 3.53 3.53 43.65 6.01
3236 3545 4.452733 GCCTAGCAGGGACGCGTT 62.453 66.667 15.53 0.00 35.37 4.84
3237 3546 2.509336 CCTAGCAGGGACGCGTTG 60.509 66.667 15.53 9.50 36.85 4.10
3238 3547 3.188786 CTAGCAGGGACGCGTTGC 61.189 66.667 23.24 23.24 38.09 4.17
3255 3564 6.764877 GCGTTGCGTATTATATATAGCCAT 57.235 37.500 0.00 0.00 0.00 4.40
3256 3565 7.862741 GCGTTGCGTATTATATATAGCCATA 57.137 36.000 0.00 0.00 0.00 2.74
3257 3566 7.939783 GCGTTGCGTATTATATATAGCCATAG 58.060 38.462 0.00 0.00 0.00 2.23
3258 3567 7.061905 GCGTTGCGTATTATATATAGCCATAGG 59.938 40.741 0.00 0.00 0.00 2.57
3259 3568 7.541091 CGTTGCGTATTATATATAGCCATAGGG 59.459 40.741 0.00 0.00 37.18 3.53
3273 3582 4.513406 CCATAGGGCTAGGGTTTACAAA 57.487 45.455 0.00 0.00 32.71 2.83
3274 3583 5.061721 CCATAGGGCTAGGGTTTACAAAT 57.938 43.478 0.00 0.00 32.71 2.32
3275 3584 5.070685 CCATAGGGCTAGGGTTTACAAATC 58.929 45.833 0.00 0.00 32.71 2.17
3276 3585 3.664551 AGGGCTAGGGTTTACAAATCC 57.335 47.619 0.00 0.00 39.55 3.01
3277 3586 2.092592 AGGGCTAGGGTTTACAAATCCG 60.093 50.000 0.00 0.00 44.07 4.18
3278 3587 2.294979 GGCTAGGGTTTACAAATCCGG 58.705 52.381 0.00 0.00 44.07 5.14
3279 3588 2.356432 GGCTAGGGTTTACAAATCCGGT 60.356 50.000 0.00 0.00 44.07 5.28
3280 3589 3.118298 GGCTAGGGTTTACAAATCCGGTA 60.118 47.826 0.00 0.00 44.07 4.02
3281 3590 4.124970 GCTAGGGTTTACAAATCCGGTAG 58.875 47.826 0.00 0.00 44.07 3.18
3282 3591 4.383444 GCTAGGGTTTACAAATCCGGTAGT 60.383 45.833 0.00 0.00 44.07 2.73
3283 3592 4.645863 AGGGTTTACAAATCCGGTAGTT 57.354 40.909 0.00 0.00 44.07 2.24
3284 3593 4.329392 AGGGTTTACAAATCCGGTAGTTG 58.671 43.478 0.00 6.94 44.07 3.16
3285 3594 3.441222 GGGTTTACAAATCCGGTAGTTGG 59.559 47.826 15.18 4.93 37.48 3.77
3286 3595 4.074259 GGTTTACAAATCCGGTAGTTGGT 58.926 43.478 15.18 9.53 37.48 3.67
3287 3596 4.520111 GGTTTACAAATCCGGTAGTTGGTT 59.480 41.667 15.18 2.40 37.48 3.67
3288 3597 5.704978 GGTTTACAAATCCGGTAGTTGGTTA 59.295 40.000 15.18 0.86 37.48 2.85
3289 3598 6.128200 GGTTTACAAATCCGGTAGTTGGTTAG 60.128 42.308 15.18 0.00 37.48 2.34
3290 3599 3.946606 ACAAATCCGGTAGTTGGTTAGG 58.053 45.455 15.18 0.00 37.48 2.69
3291 3600 2.681344 CAAATCCGGTAGTTGGTTAGGC 59.319 50.000 0.00 0.00 29.47 3.93
3292 3601 1.875488 ATCCGGTAGTTGGTTAGGCT 58.125 50.000 0.00 0.00 0.00 4.58
3293 3602 1.648116 TCCGGTAGTTGGTTAGGCTT 58.352 50.000 0.00 0.00 0.00 4.35
3294 3603 1.276989 TCCGGTAGTTGGTTAGGCTTG 59.723 52.381 0.00 0.00 0.00 4.01
3295 3604 1.276989 CCGGTAGTTGGTTAGGCTTGA 59.723 52.381 0.00 0.00 0.00 3.02
3296 3605 2.093128 CCGGTAGTTGGTTAGGCTTGAT 60.093 50.000 0.00 0.00 0.00 2.57
3297 3606 3.195661 CGGTAGTTGGTTAGGCTTGATC 58.804 50.000 0.00 0.00 0.00 2.92
3298 3607 3.542648 GGTAGTTGGTTAGGCTTGATCC 58.457 50.000 0.00 0.00 0.00 3.36
3299 3608 2.808906 AGTTGGTTAGGCTTGATCCC 57.191 50.000 0.00 0.00 0.00 3.85
3300 3609 1.285078 AGTTGGTTAGGCTTGATCCCC 59.715 52.381 0.00 0.00 0.00 4.81
3301 3610 1.005450 GTTGGTTAGGCTTGATCCCCA 59.995 52.381 0.00 0.00 0.00 4.96
3302 3611 1.377690 TGGTTAGGCTTGATCCCCAA 58.622 50.000 0.00 0.00 0.00 4.12
3314 3623 5.934781 CTTGATCCCCAAGTTAGCTATTCT 58.065 41.667 0.00 0.00 45.52 2.40
3315 3624 7.067496 CTTGATCCCCAAGTTAGCTATTCTA 57.933 40.000 0.00 0.00 45.52 2.10
3316 3625 6.420913 TGATCCCCAAGTTAGCTATTCTAC 57.579 41.667 0.00 0.00 0.00 2.59
3317 3626 5.903010 TGATCCCCAAGTTAGCTATTCTACA 59.097 40.000 0.00 0.00 0.00 2.74
3318 3627 5.871396 TCCCCAAGTTAGCTATTCTACAG 57.129 43.478 0.00 0.00 0.00 2.74
3319 3628 5.525484 TCCCCAAGTTAGCTATTCTACAGA 58.475 41.667 0.00 0.00 0.00 3.41
3320 3629 6.143915 TCCCCAAGTTAGCTATTCTACAGAT 58.856 40.000 0.00 0.00 0.00 2.90
3321 3630 7.302948 TCCCCAAGTTAGCTATTCTACAGATA 58.697 38.462 0.00 0.00 0.00 1.98
3322 3631 7.787904 TCCCCAAGTTAGCTATTCTACAGATAA 59.212 37.037 0.00 0.00 0.00 1.75
3323 3632 8.091449 CCCCAAGTTAGCTATTCTACAGATAAG 58.909 40.741 0.00 0.00 0.00 1.73
3324 3633 8.091449 CCCAAGTTAGCTATTCTACAGATAAGG 58.909 40.741 0.00 0.00 0.00 2.69
3325 3634 8.861086 CCAAGTTAGCTATTCTACAGATAAGGA 58.139 37.037 0.00 0.00 0.00 3.36
3328 3637 8.952278 AGTTAGCTATTCTACAGATAAGGATCG 58.048 37.037 0.00 0.00 37.15 3.69
3329 3638 8.948145 GTTAGCTATTCTACAGATAAGGATCGA 58.052 37.037 0.00 0.00 37.15 3.59
3330 3639 9.516546 TTAGCTATTCTACAGATAAGGATCGAA 57.483 33.333 0.00 0.00 37.15 3.71
3331 3640 8.050778 AGCTATTCTACAGATAAGGATCGAAG 57.949 38.462 0.00 0.00 37.15 3.79
3332 3641 6.750039 GCTATTCTACAGATAAGGATCGAAGC 59.250 42.308 0.00 0.00 37.15 3.86
3333 3642 6.909550 ATTCTACAGATAAGGATCGAAGCT 57.090 37.500 0.00 0.00 37.15 3.74
3334 3643 6.716934 TTCTACAGATAAGGATCGAAGCTT 57.283 37.500 0.00 0.00 37.15 3.74
3335 3644 6.716934 TCTACAGATAAGGATCGAAGCTTT 57.283 37.500 0.00 0.00 37.15 3.51
3336 3645 7.818997 TCTACAGATAAGGATCGAAGCTTTA 57.181 36.000 0.00 0.00 37.15 1.85
3337 3646 8.234136 TCTACAGATAAGGATCGAAGCTTTAA 57.766 34.615 0.00 0.00 37.15 1.52
3338 3647 8.692710 TCTACAGATAAGGATCGAAGCTTTAAA 58.307 33.333 0.00 0.00 37.15 1.52
3339 3648 7.541122 ACAGATAAGGATCGAAGCTTTAAAC 57.459 36.000 0.00 0.00 37.15 2.01
3340 3649 6.539103 ACAGATAAGGATCGAAGCTTTAAACC 59.461 38.462 0.00 3.03 37.15 3.27
3341 3650 6.763610 CAGATAAGGATCGAAGCTTTAAACCT 59.236 38.462 0.00 5.43 37.15 3.50
3342 3651 7.926555 CAGATAAGGATCGAAGCTTTAAACCTA 59.073 37.037 0.00 0.00 37.15 3.08
3343 3652 8.483758 AGATAAGGATCGAAGCTTTAAACCTAA 58.516 33.333 0.00 0.00 37.15 2.69
3344 3653 6.738832 AAGGATCGAAGCTTTAAACCTAAC 57.261 37.500 0.00 0.00 0.00 2.34
3345 3654 6.051179 AGGATCGAAGCTTTAAACCTAACT 57.949 37.500 0.00 0.00 0.00 2.24
3346 3655 7.179076 AGGATCGAAGCTTTAAACCTAACTA 57.821 36.000 0.00 0.00 0.00 2.24
3347 3656 7.040494 AGGATCGAAGCTTTAAACCTAACTAC 58.960 38.462 0.00 0.00 0.00 2.73
3348 3657 6.257411 GGATCGAAGCTTTAAACCTAACTACC 59.743 42.308 0.00 0.00 0.00 3.18
3349 3658 5.163513 TCGAAGCTTTAAACCTAACTACCG 58.836 41.667 0.00 0.00 0.00 4.02
3350 3659 4.328169 CGAAGCTTTAAACCTAACTACCGG 59.672 45.833 0.00 0.00 0.00 5.28
3351 3660 4.897509 AGCTTTAAACCTAACTACCGGT 57.102 40.909 13.98 13.98 34.27 5.28
3352 3661 5.233083 AGCTTTAAACCTAACTACCGGTT 57.767 39.130 15.04 0.00 45.01 4.44
3362 3671 7.422465 ACCTAACTACCGGTTTACATATTGA 57.578 36.000 15.04 0.00 39.17 2.57
3363 3672 8.026396 ACCTAACTACCGGTTTACATATTGAT 57.974 34.615 15.04 0.00 39.17 2.57
3364 3673 9.146586 ACCTAACTACCGGTTTACATATTGATA 57.853 33.333 15.04 0.00 39.17 2.15
3365 3674 9.415544 CCTAACTACCGGTTTACATATTGATAC 57.584 37.037 15.04 0.00 39.17 2.24
3366 3675 9.970395 CTAACTACCGGTTTACATATTGATACA 57.030 33.333 15.04 0.00 39.17 2.29
3367 3676 8.652810 AACTACCGGTTTACATATTGATACAC 57.347 34.615 15.04 0.00 33.90 2.90
3368 3677 7.784037 ACTACCGGTTTACATATTGATACACA 58.216 34.615 15.04 0.00 0.00 3.72
3369 3678 6.913873 ACCGGTTTACATATTGATACACAC 57.086 37.500 0.00 0.00 0.00 3.82
3370 3679 5.521010 ACCGGTTTACATATTGATACACACG 59.479 40.000 0.00 0.00 0.00 4.49
3371 3680 5.428770 CGGTTTACATATTGATACACACGC 58.571 41.667 0.00 0.00 0.00 5.34
3372 3681 5.005875 CGGTTTACATATTGATACACACGCA 59.994 40.000 0.00 0.00 0.00 5.24
3373 3682 6.455780 CGGTTTACATATTGATACACACGCAA 60.456 38.462 0.00 0.00 0.00 4.85
3374 3683 6.685403 GGTTTACATATTGATACACACGCAAC 59.315 38.462 0.00 0.00 0.00 4.17
3375 3684 6.969828 TTACATATTGATACACACGCAACA 57.030 33.333 0.00 0.00 0.00 3.33
3376 3685 5.216566 ACATATTGATACACACGCAACAC 57.783 39.130 0.00 0.00 0.00 3.32
3377 3686 4.094294 ACATATTGATACACACGCAACACC 59.906 41.667 0.00 0.00 0.00 4.16
3378 3687 1.954927 TTGATACACACGCAACACCA 58.045 45.000 0.00 0.00 0.00 4.17
3379 3688 1.954927 TGATACACACGCAACACCAA 58.045 45.000 0.00 0.00 0.00 3.67
3380 3689 1.870402 TGATACACACGCAACACCAAG 59.130 47.619 0.00 0.00 0.00 3.61
3381 3690 2.139917 GATACACACGCAACACCAAGA 58.860 47.619 0.00 0.00 0.00 3.02
3382 3691 1.577468 TACACACGCAACACCAAGAG 58.423 50.000 0.00 0.00 0.00 2.85
3383 3692 0.107897 ACACACGCAACACCAAGAGA 60.108 50.000 0.00 0.00 0.00 3.10
3384 3693 1.013596 CACACGCAACACCAAGAGAA 58.986 50.000 0.00 0.00 0.00 2.87
3385 3694 1.603802 CACACGCAACACCAAGAGAAT 59.396 47.619 0.00 0.00 0.00 2.40
3386 3695 2.805671 CACACGCAACACCAAGAGAATA 59.194 45.455 0.00 0.00 0.00 1.75
3387 3696 3.436704 CACACGCAACACCAAGAGAATAT 59.563 43.478 0.00 0.00 0.00 1.28
3388 3697 4.629634 CACACGCAACACCAAGAGAATATA 59.370 41.667 0.00 0.00 0.00 0.86
3389 3698 4.630069 ACACGCAACACCAAGAGAATATAC 59.370 41.667 0.00 0.00 0.00 1.47
3390 3699 3.863424 ACGCAACACCAAGAGAATATACG 59.137 43.478 0.00 0.00 0.00 3.06
3391 3700 3.245284 CGCAACACCAAGAGAATATACGG 59.755 47.826 0.00 0.00 0.00 4.02
3392 3701 4.189231 GCAACACCAAGAGAATATACGGT 58.811 43.478 0.00 0.00 0.00 4.83
3393 3702 4.634443 GCAACACCAAGAGAATATACGGTT 59.366 41.667 0.00 0.00 0.00 4.44
3394 3703 5.123344 GCAACACCAAGAGAATATACGGTTT 59.877 40.000 0.00 0.00 0.00 3.27
3395 3704 6.349033 GCAACACCAAGAGAATATACGGTTTT 60.349 38.462 0.00 0.00 0.00 2.43
3396 3705 7.148373 GCAACACCAAGAGAATATACGGTTTTA 60.148 37.037 0.00 0.00 0.00 1.52
3397 3706 8.889717 CAACACCAAGAGAATATACGGTTTTAT 58.110 33.333 0.00 0.00 0.00 1.40
3405 3714 9.466497 AGAGAATATACGGTTTTATATACCCGA 57.534 33.333 17.19 5.85 43.01 5.14
3406 3715 9.508567 GAGAATATACGGTTTTATATACCCGAC 57.491 37.037 17.19 0.38 43.01 4.79
3407 3716 9.247861 AGAATATACGGTTTTATATACCCGACT 57.752 33.333 17.19 8.99 43.01 4.18
3408 3717 9.294030 GAATATACGGTTTTATATACCCGACTG 57.706 37.037 17.19 6.51 43.01 3.51
3409 3718 6.655078 ATACGGTTTTATATACCCGACTGT 57.345 37.500 17.19 10.69 43.01 3.55
3410 3719 7.759489 ATACGGTTTTATATACCCGACTGTA 57.241 36.000 17.19 12.04 43.01 2.74
3411 3720 6.655078 ACGGTTTTATATACCCGACTGTAT 57.345 37.500 17.19 0.00 43.01 2.29
3412 3721 7.759489 ACGGTTTTATATACCCGACTGTATA 57.241 36.000 17.19 0.00 43.01 1.47
3413 3722 8.353423 ACGGTTTTATATACCCGACTGTATAT 57.647 34.615 17.19 13.24 43.45 0.86
3414 3723 9.461312 ACGGTTTTATATACCCGACTGTATATA 57.539 33.333 17.19 11.89 41.97 0.86
3415 3724 9.722056 CGGTTTTATATACCCGACTGTATATAC 57.278 37.037 5.89 5.89 42.28 1.47
3440 3749 8.161425 ACATACAATATATTCTAACACACCCCC 58.839 37.037 0.00 0.00 0.00 5.40
3441 3750 6.841781 ACAATATATTCTAACACACCCCCT 57.158 37.500 0.00 0.00 0.00 4.79
3442 3751 6.838382 ACAATATATTCTAACACACCCCCTC 58.162 40.000 0.00 0.00 0.00 4.30
3443 3752 6.388689 ACAATATATTCTAACACACCCCCTCA 59.611 38.462 0.00 0.00 0.00 3.86
3444 3753 7.092174 ACAATATATTCTAACACACCCCCTCAA 60.092 37.037 0.00 0.00 0.00 3.02
3445 3754 5.994416 ATATTCTAACACACCCCCTCAAT 57.006 39.130 0.00 0.00 0.00 2.57
3446 3755 3.713826 TTCTAACACACCCCCTCAATC 57.286 47.619 0.00 0.00 0.00 2.67
3447 3756 2.626785 TCTAACACACCCCCTCAATCA 58.373 47.619 0.00 0.00 0.00 2.57
3448 3757 3.189606 TCTAACACACCCCCTCAATCAT 58.810 45.455 0.00 0.00 0.00 2.45
3449 3758 4.367166 TCTAACACACCCCCTCAATCATA 58.633 43.478 0.00 0.00 0.00 2.15
3450 3759 4.785914 TCTAACACACCCCCTCAATCATAA 59.214 41.667 0.00 0.00 0.00 1.90
3451 3760 3.366052 ACACACCCCCTCAATCATAAC 57.634 47.619 0.00 0.00 0.00 1.89
3452 3761 2.919602 ACACACCCCCTCAATCATAACT 59.080 45.455 0.00 0.00 0.00 2.24
3453 3762 3.333680 ACACACCCCCTCAATCATAACTT 59.666 43.478 0.00 0.00 0.00 2.66
3454 3763 3.947834 CACACCCCCTCAATCATAACTTC 59.052 47.826 0.00 0.00 0.00 3.01
3455 3764 3.591527 ACACCCCCTCAATCATAACTTCA 59.408 43.478 0.00 0.00 0.00 3.02
3456 3765 3.947834 CACCCCCTCAATCATAACTTCAC 59.052 47.826 0.00 0.00 0.00 3.18
3457 3766 3.053619 ACCCCCTCAATCATAACTTCACC 60.054 47.826 0.00 0.00 0.00 4.02
3458 3767 3.053693 CCCCCTCAATCATAACTTCACCA 60.054 47.826 0.00 0.00 0.00 4.17
3459 3768 4.569653 CCCCCTCAATCATAACTTCACCAA 60.570 45.833 0.00 0.00 0.00 3.67
3460 3769 4.641989 CCCCTCAATCATAACTTCACCAAG 59.358 45.833 0.00 0.00 35.50 3.61
3461 3770 5.256474 CCCTCAATCATAACTTCACCAAGT 58.744 41.667 0.00 0.00 45.43 3.16
3472 3781 5.757850 ACTTCACCAAGTTGAGATTGTTC 57.242 39.130 3.87 0.00 40.16 3.18
3473 3782 5.440610 ACTTCACCAAGTTGAGATTGTTCT 58.559 37.500 3.87 0.00 40.16 3.01
3474 3783 5.888161 ACTTCACCAAGTTGAGATTGTTCTT 59.112 36.000 3.87 0.00 40.16 2.52
3475 3784 5.756195 TCACCAAGTTGAGATTGTTCTTG 57.244 39.130 3.87 0.00 36.34 3.02
3476 3785 5.436175 TCACCAAGTTGAGATTGTTCTTGA 58.564 37.500 3.87 0.00 38.06 3.02
3477 3786 5.885352 TCACCAAGTTGAGATTGTTCTTGAA 59.115 36.000 3.87 0.00 38.06 2.69
3478 3787 6.547141 TCACCAAGTTGAGATTGTTCTTGAAT 59.453 34.615 3.87 0.00 38.06 2.57
3479 3788 7.068593 TCACCAAGTTGAGATTGTTCTTGAATT 59.931 33.333 3.87 0.00 38.06 2.17
3480 3789 7.380602 CACCAAGTTGAGATTGTTCTTGAATTC 59.619 37.037 3.87 0.00 38.06 2.17
3481 3790 7.286316 ACCAAGTTGAGATTGTTCTTGAATTCT 59.714 33.333 3.87 0.00 38.06 2.40
3482 3791 8.139989 CCAAGTTGAGATTGTTCTTGAATTCTT 58.860 33.333 3.87 0.00 38.06 2.52
3483 3792 9.178427 CAAGTTGAGATTGTTCTTGAATTCTTC 57.822 33.333 7.05 0.00 38.06 2.87
3484 3793 8.688747 AGTTGAGATTGTTCTTGAATTCTTCT 57.311 30.769 7.05 0.00 30.30 2.85
3485 3794 9.784531 AGTTGAGATTGTTCTTGAATTCTTCTA 57.215 29.630 7.05 0.00 30.30 2.10
3488 3797 9.784531 TGAGATTGTTCTTGAATTCTTCTAAGT 57.215 29.630 7.05 0.00 30.30 2.24
3491 3800 9.122613 GATTGTTCTTGAATTCTTCTAAGTTGC 57.877 33.333 7.05 0.00 0.00 4.17
3492 3801 6.658831 TGTTCTTGAATTCTTCTAAGTTGCG 58.341 36.000 7.05 0.00 0.00 4.85
3493 3802 5.283060 TCTTGAATTCTTCTAAGTTGCGC 57.717 39.130 0.00 0.00 0.00 6.09
3494 3803 4.997395 TCTTGAATTCTTCTAAGTTGCGCT 59.003 37.500 9.73 0.00 0.00 5.92
3495 3804 6.163476 TCTTGAATTCTTCTAAGTTGCGCTA 58.837 36.000 9.73 0.00 0.00 4.26
3496 3805 6.818644 TCTTGAATTCTTCTAAGTTGCGCTAT 59.181 34.615 9.73 0.00 0.00 2.97
3497 3806 6.349973 TGAATTCTTCTAAGTTGCGCTATG 57.650 37.500 9.73 0.00 0.00 2.23
3498 3807 6.106003 TGAATTCTTCTAAGTTGCGCTATGA 58.894 36.000 9.73 0.00 0.00 2.15
3499 3808 6.763135 TGAATTCTTCTAAGTTGCGCTATGAT 59.237 34.615 9.73 0.00 0.00 2.45
3500 3809 7.926018 TGAATTCTTCTAAGTTGCGCTATGATA 59.074 33.333 9.73 0.00 0.00 2.15
3501 3810 8.662781 AATTCTTCTAAGTTGCGCTATGATAA 57.337 30.769 9.73 0.00 0.00 1.75
3502 3811 7.700322 TTCTTCTAAGTTGCGCTATGATAAG 57.300 36.000 9.73 4.82 0.00 1.73
3503 3812 6.216569 TCTTCTAAGTTGCGCTATGATAAGG 58.783 40.000 9.73 0.00 0.00 2.69
3504 3813 4.307432 TCTAAGTTGCGCTATGATAAGGC 58.693 43.478 9.73 0.00 0.00 4.35
3505 3814 2.918712 AGTTGCGCTATGATAAGGCT 57.081 45.000 9.73 0.00 0.00 4.58
3506 3815 3.199880 AGTTGCGCTATGATAAGGCTT 57.800 42.857 9.73 4.58 0.00 4.35
3507 3816 3.545703 AGTTGCGCTATGATAAGGCTTT 58.454 40.909 9.73 0.00 0.00 3.51
3508 3817 4.703897 AGTTGCGCTATGATAAGGCTTTA 58.296 39.130 9.73 0.00 0.00 1.85
3509 3818 4.752101 AGTTGCGCTATGATAAGGCTTTAG 59.248 41.667 9.73 1.89 0.00 1.85
3510 3819 4.336889 TGCGCTATGATAAGGCTTTAGT 57.663 40.909 9.73 0.00 0.00 2.24
3511 3820 4.058124 TGCGCTATGATAAGGCTTTAGTG 58.942 43.478 9.73 8.88 0.00 2.74
3512 3821 4.202212 TGCGCTATGATAAGGCTTTAGTGA 60.202 41.667 17.21 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.644798 AGTTAAATGCACCAGAGGTCCT 59.355 45.455 0.00 0.00 31.02 3.85
3 4 3.010420 GAGTTAAATGCACCAGAGGTCC 58.990 50.000 0.00 0.00 31.02 4.46
4 5 3.944087 AGAGTTAAATGCACCAGAGGTC 58.056 45.455 0.00 0.00 31.02 3.85
5 6 4.042187 AGAAGAGTTAAATGCACCAGAGGT 59.958 41.667 0.00 0.00 35.62 3.85
6 7 4.583871 AGAAGAGTTAAATGCACCAGAGG 58.416 43.478 0.00 0.00 0.00 3.69
7 8 4.328440 CGAGAAGAGTTAAATGCACCAGAG 59.672 45.833 0.00 0.00 0.00 3.35
8 9 4.021456 TCGAGAAGAGTTAAATGCACCAGA 60.021 41.667 0.00 0.00 0.00 3.86
9 10 4.245660 TCGAGAAGAGTTAAATGCACCAG 58.754 43.478 0.00 0.00 0.00 4.00
10 11 4.265904 TCGAGAAGAGTTAAATGCACCA 57.734 40.909 0.00 0.00 0.00 4.17
11 12 5.607119 TTTCGAGAAGAGTTAAATGCACC 57.393 39.130 0.00 0.00 0.00 5.01
12 13 6.659776 AGTTTTCGAGAAGAGTTAAATGCAC 58.340 36.000 0.00 0.00 0.00 4.57
13 14 6.861065 AGTTTTCGAGAAGAGTTAAATGCA 57.139 33.333 0.00 0.00 0.00 3.96
14 15 8.496751 AGTTAGTTTTCGAGAAGAGTTAAATGC 58.503 33.333 0.00 0.00 0.00 3.56
15 16 9.798885 CAGTTAGTTTTCGAGAAGAGTTAAATG 57.201 33.333 0.00 0.00 0.00 2.32
16 17 8.989980 CCAGTTAGTTTTCGAGAAGAGTTAAAT 58.010 33.333 0.00 0.00 0.00 1.40
17 18 7.983484 ACCAGTTAGTTTTCGAGAAGAGTTAAA 59.017 33.333 0.00 0.00 0.00 1.52
18 19 7.495055 ACCAGTTAGTTTTCGAGAAGAGTTAA 58.505 34.615 0.00 0.00 0.00 2.01
19 20 7.047460 ACCAGTTAGTTTTCGAGAAGAGTTA 57.953 36.000 0.00 0.00 0.00 2.24
20 21 5.915175 ACCAGTTAGTTTTCGAGAAGAGTT 58.085 37.500 0.00 0.00 0.00 3.01
21 22 5.532664 ACCAGTTAGTTTTCGAGAAGAGT 57.467 39.130 0.00 0.00 0.00 3.24
22 23 7.412020 GCATAACCAGTTAGTTTTCGAGAAGAG 60.412 40.741 0.00 0.00 0.00 2.85
23 24 6.367969 GCATAACCAGTTAGTTTTCGAGAAGA 59.632 38.462 0.00 0.00 0.00 2.87
24 25 6.534934 GCATAACCAGTTAGTTTTCGAGAAG 58.465 40.000 0.00 0.00 0.00 2.85
42 43 5.707411 ACACGGATTTAAGTACGCATAAC 57.293 39.130 1.98 0.00 0.00 1.89
46 47 5.058149 TCTAACACGGATTTAAGTACGCA 57.942 39.130 1.98 0.00 0.00 5.24
53 54 8.770828 CAGAAGAAAACTCTAACACGGATTTAA 58.229 33.333 0.00 0.00 0.00 1.52
66 67 6.944862 AGATTGGCATTACAGAAGAAAACTCT 59.055 34.615 0.00 0.00 0.00 3.24
76 77 8.138074 GCTATCGATATAGATTGGCATTACAGA 58.862 37.037 5.40 0.00 37.84 3.41
88 97 9.674068 TTTAGTCAGAGTGCTATCGATATAGAT 57.326 33.333 5.40 3.69 37.84 1.98
96 105 7.915923 TCAGTTTATTTAGTCAGAGTGCTATCG 59.084 37.037 0.00 0.00 0.00 2.92
137 146 5.694231 TGAATGTGATGGTTCTTCAAGTG 57.306 39.130 0.00 0.00 0.00 3.16
146 155 5.302568 ACACAGTTCAATGAATGTGATGGTT 59.697 36.000 28.14 13.96 44.56 3.67
224 238 7.014518 TGTGATCATTCAGACAAGGTTTTCAAT 59.985 33.333 0.00 0.00 30.85 2.57
662 676 6.840090 TGGAGATCCAACCATAGGAAATTA 57.160 37.500 0.00 0.00 44.35 1.40
748 762 2.224066 ACTGTGAAGCCACTAGTGTGAC 60.224 50.000 21.18 10.44 46.55 3.67
904 922 2.225068 TGGCTTGCTCTTATAGACGC 57.775 50.000 0.00 0.00 0.00 5.19
994 1013 4.152045 GCAGTGAGAGTTCTTCATGTCTTG 59.848 45.833 0.00 0.00 0.00 3.02
1057 1076 4.564116 CGCGCCTCCGGTTACGAT 62.564 66.667 15.06 0.00 44.60 3.73
1244 1263 8.668353 ACAGCAACATAACATTCATAGTAAGTG 58.332 33.333 0.00 0.00 0.00 3.16
1333 1358 2.429610 GCACCATCCAGCAAGATTGAAT 59.570 45.455 0.00 0.00 0.00 2.57
1391 1416 0.675837 TGACCTCGTACCCTCTGACG 60.676 60.000 0.00 0.00 40.43 4.35
1461 1486 1.004918 GGGCTACAACGTCAGCACT 60.005 57.895 15.87 0.00 38.21 4.40
1793 1825 0.531974 GTTGTGCACTTCCGTGGAGA 60.532 55.000 19.41 0.00 42.39 3.71
1821 1853 2.238646 CAGGGATGTAGCACAGGGTTTA 59.761 50.000 0.00 0.00 0.00 2.01
1822 1854 1.004745 CAGGGATGTAGCACAGGGTTT 59.995 52.381 0.00 0.00 0.00 3.27
1823 1855 0.620556 CAGGGATGTAGCACAGGGTT 59.379 55.000 0.00 0.00 0.00 4.11
1824 1856 0.252696 TCAGGGATGTAGCACAGGGT 60.253 55.000 0.00 0.00 0.00 4.34
1825 1857 0.911769 TTCAGGGATGTAGCACAGGG 59.088 55.000 0.00 0.00 0.00 4.45
1826 1858 2.787473 TTTCAGGGATGTAGCACAGG 57.213 50.000 0.00 0.00 0.00 4.00
1846 1878 3.157087 CAGGGATGTAGCACAGGTTTTT 58.843 45.455 0.00 0.00 0.00 1.94
1850 1882 1.656587 TTCAGGGATGTAGCACAGGT 58.343 50.000 0.00 0.00 0.00 4.00
1877 1909 0.250467 ACATGGCCACACTGTCACTC 60.250 55.000 8.16 0.00 0.00 3.51
1905 1937 1.069049 GCATGGCCACACTGTCTTTTT 59.931 47.619 8.16 0.00 0.00 1.94
1906 1938 0.675633 GCATGGCCACACTGTCTTTT 59.324 50.000 8.16 0.00 0.00 2.27
1907 1939 0.178981 AGCATGGCCACACTGTCTTT 60.179 50.000 8.16 0.00 0.00 2.52
1908 1940 0.178981 AAGCATGGCCACACTGTCTT 60.179 50.000 8.16 8.06 0.00 3.01
1909 1941 0.692476 TAAGCATGGCCACACTGTCT 59.308 50.000 8.16 1.52 0.00 3.41
1910 1942 1.200020 GTTAAGCATGGCCACACTGTC 59.800 52.381 8.16 0.00 0.00 3.51
1911 1943 1.202927 AGTTAAGCATGGCCACACTGT 60.203 47.619 8.16 2.34 0.00 3.55
1912 1944 1.538047 AGTTAAGCATGGCCACACTG 58.462 50.000 8.16 3.33 0.00 3.66
1913 1945 3.009033 TCTTAGTTAAGCATGGCCACACT 59.991 43.478 8.16 5.30 33.40 3.55
1914 1946 3.343617 TCTTAGTTAAGCATGGCCACAC 58.656 45.455 8.16 2.20 33.40 3.82
1915 1947 3.609853 CTCTTAGTTAAGCATGGCCACA 58.390 45.455 8.16 0.00 33.40 4.17
1916 1948 2.356069 GCTCTTAGTTAAGCATGGCCAC 59.644 50.000 8.16 0.00 38.42 5.01
1917 1949 2.026356 TGCTCTTAGTTAAGCATGGCCA 60.026 45.455 8.56 8.56 43.30 5.36
1918 1950 2.615912 CTGCTCTTAGTTAAGCATGGCC 59.384 50.000 0.00 0.00 46.69 5.36
1919 1951 3.535561 TCTGCTCTTAGTTAAGCATGGC 58.464 45.455 0.00 0.00 46.69 4.40
1920 1952 4.034975 GCTTCTGCTCTTAGTTAAGCATGG 59.965 45.833 0.00 0.00 46.69 3.66
1921 1953 4.633126 TGCTTCTGCTCTTAGTTAAGCATG 59.367 41.667 0.00 0.00 46.69 4.06
1922 1954 4.836825 TGCTTCTGCTCTTAGTTAAGCAT 58.163 39.130 0.00 0.00 46.69 3.79
1972 2015 7.439056 CCTATGAAAAATTTGTGACAGTTTGCT 59.561 33.333 0.00 0.00 0.00 3.91
1992 2037 7.981789 GTCAACTGTCTGATAATTGACCTATGA 59.018 37.037 15.06 0.00 42.06 2.15
1999 2044 7.044181 GATCAGGTCAACTGTCTGATAATTGA 58.956 38.462 9.03 0.00 45.10 2.57
2042 2087 9.724839 TTTAGGACAAAATAGAGTTTTTCGTTG 57.275 29.630 0.00 0.00 0.00 4.10
2073 2170 1.399089 CACCTGTCGGTTTTGACGTTT 59.601 47.619 0.00 0.00 42.13 3.60
2290 2387 1.557269 GGAGGCCCTTCTTGCTCAGA 61.557 60.000 0.00 0.00 0.00 3.27
2390 2487 2.694829 AAGAACTGCTCGCCGTCGTT 62.695 55.000 0.00 0.00 36.96 3.85
2520 2617 2.343758 GCCGGTGAACTCTGCTCA 59.656 61.111 1.90 0.00 0.00 4.26
2675 2832 4.521146 AGTGTGGCATCCTTTGATTCTAG 58.479 43.478 0.00 0.00 0.00 2.43
2740 3046 4.022935 AGTTGATGTATGTGTTGTGGCTTG 60.023 41.667 0.00 0.00 0.00 4.01
2741 3047 4.144297 AGTTGATGTATGTGTTGTGGCTT 58.856 39.130 0.00 0.00 0.00 4.35
2742 3048 3.754965 AGTTGATGTATGTGTTGTGGCT 58.245 40.909 0.00 0.00 0.00 4.75
2743 3049 4.503741 AAGTTGATGTATGTGTTGTGGC 57.496 40.909 0.00 0.00 0.00 5.01
2746 3052 6.995686 TGAAGGTAAGTTGATGTATGTGTTGT 59.004 34.615 0.00 0.00 0.00 3.32
2747 3053 7.433708 TGAAGGTAAGTTGATGTATGTGTTG 57.566 36.000 0.00 0.00 0.00 3.33
2972 3281 9.832445 CAGGTAGTATGATGTACCATAAAAACT 57.168 33.333 8.12 0.00 41.19 2.66
2973 3282 9.826574 TCAGGTAGTATGATGTACCATAAAAAC 57.173 33.333 8.12 0.00 41.19 2.43
2979 3288 9.381038 ACTATTTCAGGTAGTATGATGTACCAT 57.619 33.333 8.12 0.00 41.19 3.55
2980 3289 8.638873 CACTATTTCAGGTAGTATGATGTACCA 58.361 37.037 8.12 0.00 41.19 3.25
2981 3290 8.857098 TCACTATTTCAGGTAGTATGATGTACC 58.143 37.037 0.00 0.00 39.31 3.34
2982 3291 9.900710 CTCACTATTTCAGGTAGTATGATGTAC 57.099 37.037 0.00 0.00 31.46 2.90
2983 3292 9.642343 ACTCACTATTTCAGGTAGTATGATGTA 57.358 33.333 0.00 0.00 31.46 2.29
2984 3293 8.540507 ACTCACTATTTCAGGTAGTATGATGT 57.459 34.615 0.00 0.00 31.46 3.06
2986 3295 9.869667 ACTACTCACTATTTCAGGTAGTATGAT 57.130 33.333 0.00 0.00 38.29 2.45
3003 3312 7.974501 CGTTGGATCAACTAAATACTACTCACT 59.025 37.037 8.80 0.00 41.62 3.41
3004 3313 7.222224 CCGTTGGATCAACTAAATACTACTCAC 59.778 40.741 8.80 0.00 41.62 3.51
3005 3314 7.093640 ACCGTTGGATCAACTAAATACTACTCA 60.094 37.037 8.80 0.00 41.62 3.41
3006 3315 7.263496 ACCGTTGGATCAACTAAATACTACTC 58.737 38.462 8.80 0.00 41.62 2.59
3007 3316 7.093640 TGACCGTTGGATCAACTAAATACTACT 60.094 37.037 8.80 0.00 41.62 2.57
3008 3317 7.037438 TGACCGTTGGATCAACTAAATACTAC 58.963 38.462 8.80 0.00 41.62 2.73
3009 3318 7.093640 ACTGACCGTTGGATCAACTAAATACTA 60.094 37.037 8.80 0.00 41.62 1.82
3010 3319 6.045072 TGACCGTTGGATCAACTAAATACT 57.955 37.500 8.80 0.00 41.62 2.12
3011 3320 5.873164 ACTGACCGTTGGATCAACTAAATAC 59.127 40.000 8.80 0.00 41.62 1.89
3012 3321 6.045072 ACTGACCGTTGGATCAACTAAATA 57.955 37.500 8.80 0.00 41.62 1.40
3013 3322 4.906618 ACTGACCGTTGGATCAACTAAAT 58.093 39.130 8.80 0.00 41.62 1.40
3014 3323 4.345859 ACTGACCGTTGGATCAACTAAA 57.654 40.909 8.80 0.00 41.62 1.85
3015 3324 5.416083 CATACTGACCGTTGGATCAACTAA 58.584 41.667 8.80 0.00 41.62 2.24
3016 3325 4.142026 CCATACTGACCGTTGGATCAACTA 60.142 45.833 8.80 0.00 41.62 2.24
3017 3326 3.369471 CCATACTGACCGTTGGATCAACT 60.369 47.826 8.80 0.00 41.62 3.16
3018 3327 2.936498 CCATACTGACCGTTGGATCAAC 59.064 50.000 0.00 1.06 40.54 3.18
3019 3328 2.835156 TCCATACTGACCGTTGGATCAA 59.165 45.455 0.00 0.00 33.40 2.57
3020 3329 2.462723 TCCATACTGACCGTTGGATCA 58.537 47.619 0.00 0.00 33.40 2.92
3021 3330 3.753294 ATCCATACTGACCGTTGGATC 57.247 47.619 0.00 0.00 43.81 3.36
3023 3332 1.407618 CGATCCATACTGACCGTTGGA 59.592 52.381 0.00 0.00 42.18 3.53
3024 3333 1.538204 CCGATCCATACTGACCGTTGG 60.538 57.143 0.00 0.00 0.00 3.77
3025 3334 1.136305 ACCGATCCATACTGACCGTTG 59.864 52.381 0.00 0.00 0.00 4.10
3026 3335 1.481871 ACCGATCCATACTGACCGTT 58.518 50.000 0.00 0.00 0.00 4.44
3027 3336 1.481871 AACCGATCCATACTGACCGT 58.518 50.000 0.00 0.00 0.00 4.83
3028 3337 3.936372 ATAACCGATCCATACTGACCG 57.064 47.619 0.00 0.00 0.00 4.79
3029 3338 6.937436 AAAAATAACCGATCCATACTGACC 57.063 37.500 0.00 0.00 0.00 4.02
3074 3383 9.280456 AAGAACAAATCTACCTCTAATAGGGAA 57.720 33.333 0.00 0.00 43.63 3.97
3075 3384 8.855804 AAGAACAAATCTACCTCTAATAGGGA 57.144 34.615 0.00 0.00 43.63 4.20
3116 3425 9.547279 GGTGGGATGGGATTAATCTAATTAATT 57.453 33.333 14.95 5.89 43.46 1.40
3117 3426 8.122481 GGGTGGGATGGGATTAATCTAATTAAT 58.878 37.037 14.95 4.94 45.43 1.40
3118 3427 7.475299 GGGTGGGATGGGATTAATCTAATTAA 58.525 38.462 14.95 0.00 38.90 1.40
3119 3428 6.296778 CGGGTGGGATGGGATTAATCTAATTA 60.297 42.308 14.95 0.00 0.00 1.40
3120 3429 5.516591 CGGGTGGGATGGGATTAATCTAATT 60.517 44.000 14.95 0.00 0.00 1.40
3121 3430 4.018415 CGGGTGGGATGGGATTAATCTAAT 60.018 45.833 14.95 8.88 0.00 1.73
3122 3431 3.329520 CGGGTGGGATGGGATTAATCTAA 59.670 47.826 14.95 4.47 0.00 2.10
3123 3432 2.910319 CGGGTGGGATGGGATTAATCTA 59.090 50.000 14.95 5.54 0.00 1.98
3124 3433 1.705186 CGGGTGGGATGGGATTAATCT 59.295 52.381 14.95 0.00 0.00 2.40
3125 3434 1.702957 TCGGGTGGGATGGGATTAATC 59.297 52.381 6.93 6.93 0.00 1.75
3126 3435 1.423921 GTCGGGTGGGATGGGATTAAT 59.576 52.381 0.00 0.00 0.00 1.40
3127 3436 0.841289 GTCGGGTGGGATGGGATTAA 59.159 55.000 0.00 0.00 0.00 1.40
3128 3437 1.404479 CGTCGGGTGGGATGGGATTA 61.404 60.000 0.00 0.00 0.00 1.75
3129 3438 2.742116 CGTCGGGTGGGATGGGATT 61.742 63.158 0.00 0.00 0.00 3.01
3130 3439 3.161450 CGTCGGGTGGGATGGGAT 61.161 66.667 0.00 0.00 0.00 3.85
3147 3456 3.568743 TGAACACACGCACACGGC 61.569 61.111 0.00 0.00 46.04 5.68
3148 3457 1.771073 ATGTGAACACACGCACACGG 61.771 55.000 9.83 0.00 46.52 4.94
3149 3458 0.383002 GATGTGAACACACGCACACG 60.383 55.000 9.83 0.00 46.52 4.49
3150 3459 0.655208 TGATGTGAACACACGCACAC 59.345 50.000 9.83 0.00 46.52 3.82
3152 3461 1.217001 TCTGATGTGAACACACGCAC 58.783 50.000 9.83 0.00 45.05 5.34
3153 3462 1.799994 CATCTGATGTGAACACACGCA 59.200 47.619 9.83 10.14 45.05 5.24
3154 3463 2.068519 TCATCTGATGTGAACACACGC 58.931 47.619 16.66 6.29 45.05 5.34
3155 3464 2.093310 GCTCATCTGATGTGAACACACG 59.907 50.000 20.47 2.73 45.05 4.49
3156 3465 2.093310 CGCTCATCTGATGTGAACACAC 59.907 50.000 20.47 5.43 45.05 3.82
3157 3466 2.340337 CGCTCATCTGATGTGAACACA 58.660 47.619 20.47 10.04 46.44 3.72
3158 3467 1.662629 CCGCTCATCTGATGTGAACAC 59.337 52.381 20.47 4.90 0.00 3.32
3159 3468 1.405933 CCCGCTCATCTGATGTGAACA 60.406 52.381 20.47 0.52 0.00 3.18
3160 3469 1.293924 CCCGCTCATCTGATGTGAAC 58.706 55.000 20.47 7.59 0.00 3.18
3161 3470 0.904649 ACCCGCTCATCTGATGTGAA 59.095 50.000 20.47 1.20 0.00 3.18
3162 3471 0.904649 AACCCGCTCATCTGATGTGA 59.095 50.000 20.47 2.67 0.00 3.58
3163 3472 1.293924 GAACCCGCTCATCTGATGTG 58.706 55.000 16.66 15.15 0.00 3.21
3164 3473 0.179100 CGAACCCGCTCATCTGATGT 60.179 55.000 16.66 0.00 0.00 3.06
3165 3474 2.598045 CGAACCCGCTCATCTGATG 58.402 57.895 11.42 11.42 0.00 3.07
3176 3485 2.575262 GAGACGTACGCGAACCCG 60.575 66.667 15.93 11.53 42.00 5.28
3177 3486 1.226239 GAGAGACGTACGCGAACCC 60.226 63.158 15.93 0.00 42.00 4.11
3178 3487 0.167689 AAGAGAGACGTACGCGAACC 59.832 55.000 15.93 2.21 42.00 3.62
3179 3488 1.136141 TCAAGAGAGACGTACGCGAAC 60.136 52.381 15.93 4.73 42.00 3.95
3180 3489 1.150827 TCAAGAGAGACGTACGCGAA 58.849 50.000 15.93 0.00 42.00 4.70
3181 3490 1.150827 TTCAAGAGAGACGTACGCGA 58.849 50.000 15.93 0.00 42.00 5.87
3182 3491 1.905687 CTTTCAAGAGAGACGTACGCG 59.094 52.381 16.72 3.53 44.93 6.01
3183 3492 3.198863 TCTTTCAAGAGAGACGTACGC 57.801 47.619 16.72 8.42 0.00 4.42
3184 3493 4.099120 CCATCTTTCAAGAGAGACGTACG 58.901 47.826 15.01 15.01 38.66 3.67
3185 3494 3.860536 GCCATCTTTCAAGAGAGACGTAC 59.139 47.826 0.00 0.00 38.66 3.67
3186 3495 3.764434 AGCCATCTTTCAAGAGAGACGTA 59.236 43.478 0.00 0.00 38.66 3.57
3187 3496 2.564947 AGCCATCTTTCAAGAGAGACGT 59.435 45.455 0.00 0.00 38.66 4.34
3188 3497 3.244033 AGCCATCTTTCAAGAGAGACG 57.756 47.619 0.00 0.00 38.66 4.18
3189 3498 4.573900 TCAAGCCATCTTTCAAGAGAGAC 58.426 43.478 0.00 0.00 38.66 3.36
3190 3499 4.897509 TCAAGCCATCTTTCAAGAGAGA 57.102 40.909 0.00 0.00 38.66 3.10
3191 3500 4.142643 GCTTCAAGCCATCTTTCAAGAGAG 60.143 45.833 0.00 0.00 35.11 3.20
3192 3501 3.755378 GCTTCAAGCCATCTTTCAAGAGA 59.245 43.478 0.00 0.00 35.11 3.10
3193 3502 3.425892 CGCTTCAAGCCATCTTTCAAGAG 60.426 47.826 3.08 0.00 38.18 2.85
3194 3503 2.485426 CGCTTCAAGCCATCTTTCAAGA 59.515 45.455 3.08 0.00 38.18 3.02
3195 3504 2.227388 ACGCTTCAAGCCATCTTTCAAG 59.773 45.455 3.08 0.00 38.18 3.02
3196 3505 2.229792 ACGCTTCAAGCCATCTTTCAA 58.770 42.857 3.08 0.00 38.18 2.69
3197 3506 1.896220 ACGCTTCAAGCCATCTTTCA 58.104 45.000 3.08 0.00 38.18 2.69
3198 3507 3.790123 GCATACGCTTCAAGCCATCTTTC 60.790 47.826 3.08 0.00 38.18 2.62
3199 3508 2.098117 GCATACGCTTCAAGCCATCTTT 59.902 45.455 3.08 0.00 38.18 2.52
3200 3509 1.672881 GCATACGCTTCAAGCCATCTT 59.327 47.619 3.08 0.00 38.18 2.40
3201 3510 1.303309 GCATACGCTTCAAGCCATCT 58.697 50.000 3.08 0.00 38.18 2.90
3202 3511 0.308993 GGCATACGCTTCAAGCCATC 59.691 55.000 3.08 0.00 44.59 3.51
3203 3512 2.408333 GGCATACGCTTCAAGCCAT 58.592 52.632 3.08 0.00 44.59 4.40
3204 3513 3.903783 GGCATACGCTTCAAGCCA 58.096 55.556 3.08 0.00 44.59 4.75
3205 3514 1.221414 CTAGGCATACGCTTCAAGCC 58.779 55.000 3.08 0.00 45.54 4.35
3206 3515 0.583917 GCTAGGCATACGCTTCAAGC 59.416 55.000 0.00 0.00 38.60 4.01
3207 3516 1.863454 CTGCTAGGCATACGCTTCAAG 59.137 52.381 0.00 0.00 38.13 3.02
3208 3517 1.473257 CCTGCTAGGCATACGCTTCAA 60.473 52.381 0.00 0.00 38.13 2.69
3209 3518 0.104855 CCTGCTAGGCATACGCTTCA 59.895 55.000 0.00 0.00 38.13 3.02
3210 3519 0.601311 CCCTGCTAGGCATACGCTTC 60.601 60.000 0.00 0.00 38.13 3.86
3211 3520 1.048724 TCCCTGCTAGGCATACGCTT 61.049 55.000 0.00 0.00 38.13 4.68
3212 3521 1.457643 TCCCTGCTAGGCATACGCT 60.458 57.895 0.00 0.00 38.13 5.07
3213 3522 1.301009 GTCCCTGCTAGGCATACGC 60.301 63.158 0.00 0.00 38.13 4.42
3214 3523 1.007271 CGTCCCTGCTAGGCATACG 60.007 63.158 0.00 7.42 38.13 3.06
3215 3524 1.301009 GCGTCCCTGCTAGGCATAC 60.301 63.158 0.00 0.00 38.13 2.39
3216 3525 2.856628 CGCGTCCCTGCTAGGCATA 61.857 63.158 0.00 0.00 38.13 3.14
3217 3526 4.227134 CGCGTCCCTGCTAGGCAT 62.227 66.667 0.00 0.00 38.13 4.40
3219 3528 4.452733 AACGCGTCCCTGCTAGGC 62.453 66.667 14.44 0.00 32.73 3.93
3220 3529 2.509336 CAACGCGTCCCTGCTAGG 60.509 66.667 14.44 0.00 34.30 3.02
3221 3530 3.188786 GCAACGCGTCCCTGCTAG 61.189 66.667 23.36 4.31 33.20 3.42
3232 3541 6.764877 ATGGCTATATATAATACGCAACGC 57.235 37.500 4.62 0.00 0.00 4.84
3233 3542 7.541091 CCCTATGGCTATATATAATACGCAACG 59.459 40.741 4.62 0.00 0.00 4.10
3234 3543 8.758633 CCCTATGGCTATATATAATACGCAAC 57.241 38.462 4.62 0.00 0.00 4.17
3252 3561 4.513406 TTTGTAAACCCTAGCCCTATGG 57.487 45.455 0.00 0.00 0.00 2.74
3253 3562 5.070685 GGATTTGTAAACCCTAGCCCTATG 58.929 45.833 0.00 0.00 0.00 2.23
3254 3563 4.202430 CGGATTTGTAAACCCTAGCCCTAT 60.202 45.833 0.00 0.00 0.00 2.57
3255 3564 3.135167 CGGATTTGTAAACCCTAGCCCTA 59.865 47.826 0.00 0.00 0.00 3.53
3256 3565 2.092592 CGGATTTGTAAACCCTAGCCCT 60.093 50.000 0.00 0.00 0.00 5.19
3257 3566 2.294979 CGGATTTGTAAACCCTAGCCC 58.705 52.381 0.00 0.00 0.00 5.19
3258 3567 2.294979 CCGGATTTGTAAACCCTAGCC 58.705 52.381 0.00 0.00 0.00 3.93
3259 3568 2.995283 ACCGGATTTGTAAACCCTAGC 58.005 47.619 9.46 0.00 0.00 3.42
3260 3569 5.349061 ACTACCGGATTTGTAAACCCTAG 57.651 43.478 9.46 0.00 0.00 3.02
3261 3570 5.490159 CAACTACCGGATTTGTAAACCCTA 58.510 41.667 9.46 0.00 0.00 3.53
3262 3571 4.329392 CAACTACCGGATTTGTAAACCCT 58.671 43.478 9.46 0.00 0.00 4.34
3263 3572 3.441222 CCAACTACCGGATTTGTAAACCC 59.559 47.826 9.46 0.00 0.00 4.11
3264 3573 4.074259 ACCAACTACCGGATTTGTAAACC 58.926 43.478 9.46 0.00 0.00 3.27
3265 3574 5.694231 AACCAACTACCGGATTTGTAAAC 57.306 39.130 9.46 0.00 0.00 2.01
3266 3575 5.939296 CCTAACCAACTACCGGATTTGTAAA 59.061 40.000 9.46 0.00 0.00 2.01
3267 3576 5.490159 CCTAACCAACTACCGGATTTGTAA 58.510 41.667 9.46 0.00 0.00 2.41
3268 3577 4.623647 GCCTAACCAACTACCGGATTTGTA 60.624 45.833 9.46 0.00 0.00 2.41
3269 3578 3.871074 GCCTAACCAACTACCGGATTTGT 60.871 47.826 9.46 0.00 0.00 2.83
3270 3579 2.681344 GCCTAACCAACTACCGGATTTG 59.319 50.000 9.46 8.00 0.00 2.32
3271 3580 2.574824 AGCCTAACCAACTACCGGATTT 59.425 45.455 9.46 0.00 0.00 2.17
3272 3581 2.193993 AGCCTAACCAACTACCGGATT 58.806 47.619 9.46 0.00 0.00 3.01
3273 3582 1.875488 AGCCTAACCAACTACCGGAT 58.125 50.000 9.46 0.00 0.00 4.18
3274 3583 1.276989 CAAGCCTAACCAACTACCGGA 59.723 52.381 9.46 0.00 0.00 5.14
3275 3584 1.276989 TCAAGCCTAACCAACTACCGG 59.723 52.381 0.00 0.00 0.00 5.28
3276 3585 2.754946 TCAAGCCTAACCAACTACCG 57.245 50.000 0.00 0.00 0.00 4.02
3277 3586 3.542648 GGATCAAGCCTAACCAACTACC 58.457 50.000 0.00 0.00 0.00 3.18
3278 3587 3.542648 GGGATCAAGCCTAACCAACTAC 58.457 50.000 0.00 0.00 0.00 2.73
3279 3588 2.508300 GGGGATCAAGCCTAACCAACTA 59.492 50.000 0.00 0.00 0.00 2.24
3280 3589 1.285078 GGGGATCAAGCCTAACCAACT 59.715 52.381 0.00 0.00 0.00 3.16
3281 3590 1.005450 TGGGGATCAAGCCTAACCAAC 59.995 52.381 0.00 0.00 0.00 3.77
3282 3591 1.377690 TGGGGATCAAGCCTAACCAA 58.622 50.000 0.00 0.00 0.00 3.67
3283 3592 1.284785 CTTGGGGATCAAGCCTAACCA 59.715 52.381 0.00 0.00 45.24 3.67
3284 3593 2.058593 CTTGGGGATCAAGCCTAACC 57.941 55.000 0.00 0.00 45.24 2.85
3292 3601 5.975988 AGAATAGCTAACTTGGGGATCAA 57.024 39.130 0.00 0.00 0.00 2.57
3293 3602 5.903010 TGTAGAATAGCTAACTTGGGGATCA 59.097 40.000 0.00 0.00 0.00 2.92
3294 3603 6.267928 TCTGTAGAATAGCTAACTTGGGGATC 59.732 42.308 0.00 0.00 0.00 3.36
3295 3604 6.143915 TCTGTAGAATAGCTAACTTGGGGAT 58.856 40.000 0.00 0.00 0.00 3.85
3296 3605 5.525484 TCTGTAGAATAGCTAACTTGGGGA 58.475 41.667 0.00 0.00 0.00 4.81
3297 3606 5.871396 TCTGTAGAATAGCTAACTTGGGG 57.129 43.478 0.00 0.00 0.00 4.96
3298 3607 8.091449 CCTTATCTGTAGAATAGCTAACTTGGG 58.909 40.741 0.00 0.00 0.00 4.12
3299 3608 8.861086 TCCTTATCTGTAGAATAGCTAACTTGG 58.139 37.037 0.00 0.00 0.00 3.61
3302 3611 8.952278 CGATCCTTATCTGTAGAATAGCTAACT 58.048 37.037 0.00 3.25 0.00 2.24
3303 3612 8.948145 TCGATCCTTATCTGTAGAATAGCTAAC 58.052 37.037 0.00 0.00 0.00 2.34
3304 3613 9.516546 TTCGATCCTTATCTGTAGAATAGCTAA 57.483 33.333 0.00 0.00 0.00 3.09
3305 3614 9.168451 CTTCGATCCTTATCTGTAGAATAGCTA 57.832 37.037 0.00 0.00 0.00 3.32
3306 3615 7.362574 GCTTCGATCCTTATCTGTAGAATAGCT 60.363 40.741 0.00 0.00 0.00 3.32
3307 3616 6.750039 GCTTCGATCCTTATCTGTAGAATAGC 59.250 42.308 0.00 0.00 0.00 2.97
3308 3617 8.050778 AGCTTCGATCCTTATCTGTAGAATAG 57.949 38.462 0.00 0.00 0.00 1.73
3309 3618 8.410673 AAGCTTCGATCCTTATCTGTAGAATA 57.589 34.615 0.00 0.00 0.00 1.75
3310 3619 6.909550 AGCTTCGATCCTTATCTGTAGAAT 57.090 37.500 0.00 0.00 0.00 2.40
3311 3620 6.716934 AAGCTTCGATCCTTATCTGTAGAA 57.283 37.500 0.00 0.00 0.00 2.10
3312 3621 6.716934 AAAGCTTCGATCCTTATCTGTAGA 57.283 37.500 0.00 0.00 0.00 2.59
3313 3622 8.756864 GTTTAAAGCTTCGATCCTTATCTGTAG 58.243 37.037 0.00 0.00 0.00 2.74
3314 3623 7.709613 GGTTTAAAGCTTCGATCCTTATCTGTA 59.290 37.037 10.13 0.00 0.00 2.74
3315 3624 6.539103 GGTTTAAAGCTTCGATCCTTATCTGT 59.461 38.462 10.13 0.00 0.00 3.41
3316 3625 6.763610 AGGTTTAAAGCTTCGATCCTTATCTG 59.236 38.462 14.07 0.00 31.69 2.90
3317 3626 6.890293 AGGTTTAAAGCTTCGATCCTTATCT 58.110 36.000 14.07 0.00 31.69 1.98
3318 3627 8.549548 GTTAGGTTTAAAGCTTCGATCCTTATC 58.450 37.037 23.78 0.28 37.92 1.75
3319 3628 8.265764 AGTTAGGTTTAAAGCTTCGATCCTTAT 58.734 33.333 23.78 0.00 37.92 1.73
3320 3629 7.618137 AGTTAGGTTTAAAGCTTCGATCCTTA 58.382 34.615 23.78 1.17 37.92 2.69
3321 3630 6.473758 AGTTAGGTTTAAAGCTTCGATCCTT 58.526 36.000 23.78 0.63 37.92 3.36
3322 3631 6.051179 AGTTAGGTTTAAAGCTTCGATCCT 57.949 37.500 23.78 9.69 37.92 3.24
3323 3632 6.257411 GGTAGTTAGGTTTAAAGCTTCGATCC 59.743 42.308 23.78 16.51 37.92 3.36
3324 3633 6.020041 CGGTAGTTAGGTTTAAAGCTTCGATC 60.020 42.308 23.78 13.12 37.92 3.69
3325 3634 5.809051 CGGTAGTTAGGTTTAAAGCTTCGAT 59.191 40.000 23.78 11.11 37.92 3.59
3326 3635 5.163513 CGGTAGTTAGGTTTAAAGCTTCGA 58.836 41.667 23.78 11.70 37.92 3.71
3327 3636 4.328169 CCGGTAGTTAGGTTTAAAGCTTCG 59.672 45.833 23.78 16.36 37.92 3.79
3328 3637 5.240891 ACCGGTAGTTAGGTTTAAAGCTTC 58.759 41.667 23.78 16.73 37.49 3.86
3329 3638 5.233083 ACCGGTAGTTAGGTTTAAAGCTT 57.767 39.130 23.78 9.90 37.49 3.74
3330 3639 4.897509 ACCGGTAGTTAGGTTTAAAGCT 57.102 40.909 22.42 22.42 37.49 3.74
3338 3647 7.422465 TCAATATGTAAACCGGTAGTTAGGT 57.578 36.000 8.00 0.00 43.68 3.08
3339 3648 9.415544 GTATCAATATGTAAACCGGTAGTTAGG 57.584 37.037 8.00 0.00 37.88 2.69
3340 3649 9.970395 TGTATCAATATGTAAACCGGTAGTTAG 57.030 33.333 8.00 0.00 37.88 2.34
3341 3650 9.748708 GTGTATCAATATGTAAACCGGTAGTTA 57.251 33.333 8.00 0.00 37.88 2.24
3342 3651 8.259411 TGTGTATCAATATGTAAACCGGTAGTT 58.741 33.333 8.00 1.02 41.81 2.24
3343 3652 7.707893 GTGTGTATCAATATGTAAACCGGTAGT 59.292 37.037 8.00 0.62 0.00 2.73
3344 3653 7.096353 CGTGTGTATCAATATGTAAACCGGTAG 60.096 40.741 8.00 0.00 0.00 3.18
3345 3654 6.696583 CGTGTGTATCAATATGTAAACCGGTA 59.303 38.462 8.00 0.00 0.00 4.02
3346 3655 5.521010 CGTGTGTATCAATATGTAAACCGGT 59.479 40.000 0.00 0.00 0.00 5.28
3347 3656 5.557514 GCGTGTGTATCAATATGTAAACCGG 60.558 44.000 0.00 0.00 0.00 5.28
3348 3657 5.005875 TGCGTGTGTATCAATATGTAAACCG 59.994 40.000 0.00 0.00 0.00 4.44
3349 3658 6.352682 TGCGTGTGTATCAATATGTAAACC 57.647 37.500 0.00 0.00 0.00 3.27
3350 3659 7.215568 GTGTTGCGTGTGTATCAATATGTAAAC 59.784 37.037 0.00 0.00 0.00 2.01
3351 3660 7.237871 GTGTTGCGTGTGTATCAATATGTAAA 58.762 34.615 0.00 0.00 0.00 2.01
3352 3661 6.183360 GGTGTTGCGTGTGTATCAATATGTAA 60.183 38.462 0.00 0.00 0.00 2.41
3353 3662 5.292345 GGTGTTGCGTGTGTATCAATATGTA 59.708 40.000 0.00 0.00 0.00 2.29
3354 3663 4.094294 GGTGTTGCGTGTGTATCAATATGT 59.906 41.667 0.00 0.00 0.00 2.29
3355 3664 4.094146 TGGTGTTGCGTGTGTATCAATATG 59.906 41.667 0.00 0.00 0.00 1.78
3356 3665 4.257731 TGGTGTTGCGTGTGTATCAATAT 58.742 39.130 0.00 0.00 0.00 1.28
3357 3666 3.665190 TGGTGTTGCGTGTGTATCAATA 58.335 40.909 0.00 0.00 0.00 1.90
3358 3667 2.499197 TGGTGTTGCGTGTGTATCAAT 58.501 42.857 0.00 0.00 0.00 2.57
3359 3668 1.954927 TGGTGTTGCGTGTGTATCAA 58.045 45.000 0.00 0.00 0.00 2.57
3360 3669 1.870402 CTTGGTGTTGCGTGTGTATCA 59.130 47.619 0.00 0.00 0.00 2.15
3361 3670 2.139917 TCTTGGTGTTGCGTGTGTATC 58.860 47.619 0.00 0.00 0.00 2.24
3362 3671 2.143122 CTCTTGGTGTTGCGTGTGTAT 58.857 47.619 0.00 0.00 0.00 2.29
3363 3672 1.137282 TCTCTTGGTGTTGCGTGTGTA 59.863 47.619 0.00 0.00 0.00 2.90
3364 3673 0.107897 TCTCTTGGTGTTGCGTGTGT 60.108 50.000 0.00 0.00 0.00 3.72
3365 3674 1.013596 TTCTCTTGGTGTTGCGTGTG 58.986 50.000 0.00 0.00 0.00 3.82
3366 3675 1.967319 ATTCTCTTGGTGTTGCGTGT 58.033 45.000 0.00 0.00 0.00 4.49
3367 3676 4.259810 CGTATATTCTCTTGGTGTTGCGTG 60.260 45.833 0.00 0.00 0.00 5.34
3368 3677 3.863424 CGTATATTCTCTTGGTGTTGCGT 59.137 43.478 0.00 0.00 0.00 5.24
3369 3678 3.245284 CCGTATATTCTCTTGGTGTTGCG 59.755 47.826 0.00 0.00 0.00 4.85
3370 3679 4.189231 ACCGTATATTCTCTTGGTGTTGC 58.811 43.478 0.00 0.00 0.00 4.17
3371 3680 6.737254 AAACCGTATATTCTCTTGGTGTTG 57.263 37.500 0.00 0.00 0.00 3.33
3379 3688 9.466497 TCGGGTATATAAAACCGTATATTCTCT 57.534 33.333 16.63 0.00 46.06 3.10
3380 3689 9.508567 GTCGGGTATATAAAACCGTATATTCTC 57.491 37.037 16.63 0.00 46.06 2.87
3381 3690 9.247861 AGTCGGGTATATAAAACCGTATATTCT 57.752 33.333 16.63 8.05 46.06 2.40
3382 3691 9.294030 CAGTCGGGTATATAAAACCGTATATTC 57.706 37.037 16.63 6.66 46.06 1.75
3383 3692 8.806146 ACAGTCGGGTATATAAAACCGTATATT 58.194 33.333 16.63 0.00 46.06 1.28
3384 3693 8.353423 ACAGTCGGGTATATAAAACCGTATAT 57.647 34.615 16.63 0.00 46.06 0.86
3385 3694 7.759489 ACAGTCGGGTATATAAAACCGTATA 57.241 36.000 16.63 1.57 46.06 1.47
3386 3695 6.655078 ACAGTCGGGTATATAAAACCGTAT 57.345 37.500 16.63 7.95 46.06 3.06
3387 3696 7.759489 ATACAGTCGGGTATATAAAACCGTA 57.241 36.000 16.63 6.85 46.06 4.02
3388 3697 6.655078 ATACAGTCGGGTATATAAAACCGT 57.345 37.500 16.63 5.35 46.06 4.83
3389 3698 9.722056 GTATATACAGTCGGGTATATAAAACCG 57.278 37.037 16.77 12.95 44.55 4.44
3414 3723 8.161425 GGGGGTGTGTTAGAATATATTGTATGT 58.839 37.037 1.78 0.00 0.00 2.29
3415 3724 8.383175 AGGGGGTGTGTTAGAATATATTGTATG 58.617 37.037 1.78 0.00 0.00 2.39
3416 3725 8.520119 AGGGGGTGTGTTAGAATATATTGTAT 57.480 34.615 1.78 0.00 0.00 2.29
3417 3726 7.569485 TGAGGGGGTGTGTTAGAATATATTGTA 59.431 37.037 1.78 0.00 0.00 2.41
3418 3727 6.388689 TGAGGGGGTGTGTTAGAATATATTGT 59.611 38.462 1.78 0.96 0.00 2.71
3419 3728 6.837312 TGAGGGGGTGTGTTAGAATATATTG 58.163 40.000 1.78 0.00 0.00 1.90
3420 3729 7.460214 TTGAGGGGGTGTGTTAGAATATATT 57.540 36.000 0.00 0.00 0.00 1.28
3421 3730 7.294720 TGATTGAGGGGGTGTGTTAGAATATAT 59.705 37.037 0.00 0.00 0.00 0.86
3422 3731 6.617784 TGATTGAGGGGGTGTGTTAGAATATA 59.382 38.462 0.00 0.00 0.00 0.86
3423 3732 5.431731 TGATTGAGGGGGTGTGTTAGAATAT 59.568 40.000 0.00 0.00 0.00 1.28
3424 3733 4.785914 TGATTGAGGGGGTGTGTTAGAATA 59.214 41.667 0.00 0.00 0.00 1.75
3425 3734 3.591527 TGATTGAGGGGGTGTGTTAGAAT 59.408 43.478 0.00 0.00 0.00 2.40
3426 3735 2.983192 TGATTGAGGGGGTGTGTTAGAA 59.017 45.455 0.00 0.00 0.00 2.10
3427 3736 2.626785 TGATTGAGGGGGTGTGTTAGA 58.373 47.619 0.00 0.00 0.00 2.10
3428 3737 3.652057 ATGATTGAGGGGGTGTGTTAG 57.348 47.619 0.00 0.00 0.00 2.34
3429 3738 4.538490 AGTTATGATTGAGGGGGTGTGTTA 59.462 41.667 0.00 0.00 0.00 2.41
3430 3739 3.333680 AGTTATGATTGAGGGGGTGTGTT 59.666 43.478 0.00 0.00 0.00 3.32
3431 3740 2.919602 AGTTATGATTGAGGGGGTGTGT 59.080 45.455 0.00 0.00 0.00 3.72
3432 3741 3.652057 AGTTATGATTGAGGGGGTGTG 57.348 47.619 0.00 0.00 0.00 3.82
3433 3742 3.591527 TGAAGTTATGATTGAGGGGGTGT 59.408 43.478 0.00 0.00 0.00 4.16
3434 3743 3.947834 GTGAAGTTATGATTGAGGGGGTG 59.052 47.826 0.00 0.00 0.00 4.61
3435 3744 3.053619 GGTGAAGTTATGATTGAGGGGGT 60.054 47.826 0.00 0.00 0.00 4.95
3436 3745 3.053693 TGGTGAAGTTATGATTGAGGGGG 60.054 47.826 0.00 0.00 0.00 5.40
3437 3746 4.235079 TGGTGAAGTTATGATTGAGGGG 57.765 45.455 0.00 0.00 0.00 4.79
3438 3747 5.256474 ACTTGGTGAAGTTATGATTGAGGG 58.744 41.667 0.00 0.00 39.56 4.30
3448 3757 7.556275 AAGAACAATCTCAACTTGGTGAAGTTA 59.444 33.333 0.00 0.00 41.61 2.24
3449 3758 6.378280 AAGAACAATCTCAACTTGGTGAAGTT 59.622 34.615 0.00 0.00 43.02 2.66
3450 3759 5.440610 AGAACAATCTCAACTTGGTGAAGT 58.559 37.500 0.00 0.00 44.79 3.01
3451 3760 6.038603 TCAAGAACAATCTCAACTTGGTGAAG 59.961 38.462 0.00 0.00 38.56 3.02
3452 3761 5.885352 TCAAGAACAATCTCAACTTGGTGAA 59.115 36.000 0.00 0.00 38.56 3.18
3453 3762 5.436175 TCAAGAACAATCTCAACTTGGTGA 58.564 37.500 0.00 0.00 38.56 4.02
3454 3763 5.756195 TCAAGAACAATCTCAACTTGGTG 57.244 39.130 0.00 0.00 38.56 4.17
3455 3764 6.966534 ATTCAAGAACAATCTCAACTTGGT 57.033 33.333 0.00 0.00 38.56 3.67
3456 3765 7.655490 AGAATTCAAGAACAATCTCAACTTGG 58.345 34.615 8.44 0.00 38.56 3.61
3457 3766 9.178427 GAAGAATTCAAGAACAATCTCAACTTG 57.822 33.333 8.44 0.00 46.62 3.16
3476 3785 8.662781 TTATCATAGCGCAACTTAGAAGAATT 57.337 30.769 11.47 0.00 0.00 2.17
3477 3786 7.386299 CCTTATCATAGCGCAACTTAGAAGAAT 59.614 37.037 11.47 0.00 0.00 2.40
3478 3787 6.701841 CCTTATCATAGCGCAACTTAGAAGAA 59.298 38.462 11.47 0.00 0.00 2.52
3479 3788 6.216569 CCTTATCATAGCGCAACTTAGAAGA 58.783 40.000 11.47 0.00 0.00 2.87
3480 3789 5.107298 GCCTTATCATAGCGCAACTTAGAAG 60.107 44.000 11.47 4.54 0.00 2.85
3481 3790 4.750098 GCCTTATCATAGCGCAACTTAGAA 59.250 41.667 11.47 0.00 0.00 2.10
3482 3791 4.039245 AGCCTTATCATAGCGCAACTTAGA 59.961 41.667 11.47 0.00 0.00 2.10
3483 3792 4.310769 AGCCTTATCATAGCGCAACTTAG 58.689 43.478 11.47 0.00 0.00 2.18
3484 3793 4.336889 AGCCTTATCATAGCGCAACTTA 57.663 40.909 11.47 0.00 0.00 2.24
3485 3794 3.199880 AGCCTTATCATAGCGCAACTT 57.800 42.857 11.47 0.00 0.00 2.66
3486 3795 2.918712 AGCCTTATCATAGCGCAACT 57.081 45.000 11.47 0.00 0.00 3.16
3487 3796 3.971032 AAAGCCTTATCATAGCGCAAC 57.029 42.857 11.47 0.00 0.00 4.17
3488 3797 4.511454 CACTAAAGCCTTATCATAGCGCAA 59.489 41.667 11.47 0.00 0.00 4.85
3489 3798 4.058124 CACTAAAGCCTTATCATAGCGCA 58.942 43.478 11.47 0.00 0.00 6.09
3490 3799 4.307432 TCACTAAAGCCTTATCATAGCGC 58.693 43.478 0.00 0.00 0.00 5.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.