Multiple sequence alignment - TraesCS1A01G103500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G103500 chr1A 100.000 4321 0 0 1 4321 99656553 99660873 0.000000e+00 7980
1 TraesCS1A01G103500 chr1A 89.652 2300 195 23 1095 3358 99700384 99698092 0.000000e+00 2889
2 TraesCS1A01G103500 chr1A 87.308 1891 188 29 1789 3647 297746707 297744837 0.000000e+00 2115
3 TraesCS1A01G103500 chr1A 87.640 445 49 2 1342 1784 297747184 297746744 2.980000e-141 512
4 TraesCS1A01G103500 chr1A 83.556 225 22 8 1095 1308 297747475 297747255 3.410000e-46 196
5 TraesCS1A01G103500 chr5D 94.815 3221 106 19 1137 4321 11433120 11436315 0.000000e+00 4966
6 TraesCS1A01G103500 chr5D 89.429 1419 111 21 1095 2478 11531755 11530341 0.000000e+00 1753
7 TraesCS1A01G103500 chr5D 89.183 906 77 8 2463 3358 11530328 11529434 0.000000e+00 1110
8 TraesCS1A01G103500 chr5D 93.541 418 21 1 160 571 11428863 11428446 6.140000e-173 617
9 TraesCS1A01G103500 chr5D 79.341 789 128 28 4 777 488779466 488780234 4.950000e-144 521
10 TraesCS1A01G103500 chr5D 83.019 371 48 8 3420 3780 11529441 11529076 5.390000e-84 322
11 TraesCS1A01G103500 chr5D 95.876 97 4 0 1 97 11428349 11428445 1.610000e-34 158
12 TraesCS1A01G103500 chr5B 89.174 2300 198 26 1095 3352 11514891 11517181 0.000000e+00 2820
13 TraesCS1A01G103500 chr5B 90.781 1985 104 30 1600 3557 11552402 11550470 0.000000e+00 2579
14 TraesCS1A01G103500 chr5B 92.857 798 50 2 1 792 11587707 11586911 0.000000e+00 1151
15 TraesCS1A01G103500 chr5B 96.318 516 17 1 1094 1607 11555145 11554630 0.000000e+00 846
16 TraesCS1A01G103500 chr5B 93.798 387 14 2 3559 3941 11550343 11549963 1.350000e-159 573
17 TraesCS1A01G103500 chr5B 78.841 794 125 30 1 777 602063584 602064351 3.000000e-136 496
18 TraesCS1A01G103500 chr5B 89.460 389 21 6 3952 4321 11532524 11532137 1.410000e-129 473
19 TraesCS1A01G103500 chr1B 88.570 2336 226 24 1342 3647 328822808 328820484 0.000000e+00 2796
20 TraesCS1A01G103500 chr1B 88.889 144 14 1 1095 1238 328822993 328822852 4.440000e-40 176
21 TraesCS1A01G103500 chr1D 88.296 1854 183 19 1789 3616 229485301 229483456 0.000000e+00 2191
22 TraesCS1A01G103500 chr1D 87.892 446 45 5 1342 1784 229485777 229485338 2.300000e-142 516
23 TraesCS1A01G103500 chr1D 83.036 224 24 9 1095 1308 229486067 229485848 1.590000e-44 191
24 TraesCS1A01G103500 chr1D 81.657 169 28 3 3740 3906 110607880 110607713 2.100000e-28 137
25 TraesCS1A01G103500 chr5A 81.408 554 90 11 230 777 609786091 609786637 1.430000e-119 440
26 TraesCS1A01G103500 chr5A 85.668 307 36 7 790 1094 595583283 595583583 2.510000e-82 316
27 TraesCS1A01G103500 chr3D 91.803 122 9 1 790 910 601236399 601236520 7.430000e-38 169
28 TraesCS1A01G103500 chr2D 92.437 119 8 1 790 907 14459560 14459678 7.430000e-38 169
29 TraesCS1A01G103500 chrUn 90.909 121 10 1 791 910 31885332 31885212 1.240000e-35 161
30 TraesCS1A01G103500 chrUn 90.909 121 10 1 791 910 31895824 31895704 1.240000e-35 161
31 TraesCS1A01G103500 chr7D 90.991 111 9 1 790 900 65722064 65721955 9.680000e-32 148
32 TraesCS1A01G103500 chr7D 87.302 126 16 0 785 910 600079377 600079502 1.250000e-30 145
33 TraesCS1A01G103500 chr4B 88.889 117 11 2 790 904 525394021 525394137 4.500000e-30 143
34 TraesCS1A01G103500 chr4A 84.672 137 20 1 790 925 158671980 158671844 7.540000e-28 135


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G103500 chr1A 99656553 99660873 4320 False 7980.000000 7980 100.000000 1 4321 1 chr1A.!!$F1 4320
1 TraesCS1A01G103500 chr1A 99698092 99700384 2292 True 2889.000000 2889 89.652000 1095 3358 1 chr1A.!!$R1 2263
2 TraesCS1A01G103500 chr1A 297744837 297747475 2638 True 941.000000 2115 86.168000 1095 3647 3 chr1A.!!$R2 2552
3 TraesCS1A01G103500 chr5D 11433120 11436315 3195 False 4966.000000 4966 94.815000 1137 4321 1 chr5D.!!$F2 3184
4 TraesCS1A01G103500 chr5D 11529076 11531755 2679 True 1061.666667 1753 87.210333 1095 3780 3 chr5D.!!$R2 2685
5 TraesCS1A01G103500 chr5D 488779466 488780234 768 False 521.000000 521 79.341000 4 777 1 chr5D.!!$F3 773
6 TraesCS1A01G103500 chr5B 11514891 11517181 2290 False 2820.000000 2820 89.174000 1095 3352 1 chr5B.!!$F1 2257
7 TraesCS1A01G103500 chr5B 11549963 11555145 5182 True 1332.666667 2579 93.632333 1094 3941 3 chr5B.!!$R3 2847
8 TraesCS1A01G103500 chr5B 11586911 11587707 796 True 1151.000000 1151 92.857000 1 792 1 chr5B.!!$R2 791
9 TraesCS1A01G103500 chr5B 602063584 602064351 767 False 496.000000 496 78.841000 1 777 1 chr5B.!!$F2 776
10 TraesCS1A01G103500 chr1B 328820484 328822993 2509 True 1486.000000 2796 88.729500 1095 3647 2 chr1B.!!$R1 2552
11 TraesCS1A01G103500 chr1D 229483456 229486067 2611 True 966.000000 2191 86.408000 1095 3616 3 chr1D.!!$R2 2521
12 TraesCS1A01G103500 chr5A 609786091 609786637 546 False 440.000000 440 81.408000 230 777 1 chr5A.!!$F2 547

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
986 995 0.034089 GCTCCCAATGCCTAAGTGGT 60.034 55.0 0.00 0.0 38.35 4.16 F
1019 1028 0.179018 ATGGGCCCAGCTATTTCGTC 60.179 55.0 31.97 0.0 0.00 4.20 F
1028 1037 0.317020 GCTATTTCGTCCGCCAATGC 60.317 55.0 0.00 0.0 0.00 3.56 F
1060 1069 0.729116 CGCATGTCTCTTGCCGATTT 59.271 50.0 0.00 0.0 36.75 2.17 F
1837 4176 0.753479 TGCCAAACCAACACCGACAT 60.753 50.0 0.00 0.0 0.00 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1812 4151 0.664166 GTGTTGGTTTGGCATGAGCG 60.664 55.000 0.0 0.0 43.41 5.03 R
2154 4503 1.199624 GCAAAAACGCACAAGAGTGG 58.800 50.000 0.0 0.0 45.98 4.00 R
2768 5161 1.444119 TTGCCTTGGTTGACAGCGAC 61.444 55.000 0.0 0.0 0.00 5.19 R
3034 5435 3.393800 CTGCCTATTCCATAGAACCACG 58.606 50.000 0.0 0.0 33.97 4.94 R
3724 6426 1.355381 TCGTTCCTACTCTGTACCCCA 59.645 52.381 0.0 0.0 0.00 4.96 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
89 90 3.872182 TCGACTTCAACGGAAAATTGTCA 59.128 39.130 0.00 0.00 31.35 3.58
138 141 4.826274 TTCCAAACACACCATTCCAAAA 57.174 36.364 0.00 0.00 0.00 2.44
151 154 8.576442 ACACCATTCCAAAATCAAAGTACTTAG 58.424 33.333 8.92 0.00 0.00 2.18
241 250 3.444703 ACTAAGATGCAAGCCTACTCG 57.555 47.619 0.00 0.00 0.00 4.18
268 277 3.673594 CGTCACTCATCTCCCAGTTGTAC 60.674 52.174 0.00 0.00 0.00 2.90
318 327 7.701924 CACATTATTGTTAAAATGGAGCACGAT 59.298 33.333 0.00 0.00 37.40 3.73
325 334 7.995289 TGTTAAAATGGAGCACGATGATTAAT 58.005 30.769 0.00 0.00 0.00 1.40
333 342 5.235305 AGCACGATGATTAATTTGTCACC 57.765 39.130 0.00 0.00 0.00 4.02
362 371 2.342651 CAGTAGCAGTTGTCACGAATCG 59.657 50.000 0.00 0.00 0.00 3.34
396 405 4.206477 TGATGACAAGACGTCCATCATT 57.794 40.909 23.09 6.21 44.71 2.57
398 407 4.631377 TGATGACAAGACGTCCATCATTTC 59.369 41.667 23.09 15.09 44.71 2.17
406 415 2.159531 ACGTCCATCATTTCGCAACATG 60.160 45.455 0.00 0.00 0.00 3.21
412 421 4.276678 CCATCATTTCGCAACATGGAGTAT 59.723 41.667 0.00 0.00 36.84 2.12
474 483 2.834549 AGTCACCACTACCCTGATTCTG 59.165 50.000 0.00 0.00 0.00 3.02
489 498 4.077108 TGATTCTGCATTTCTCAAGCACT 58.923 39.130 0.00 0.00 34.13 4.40
612 621 5.491982 CAATCTTACTAGGAGTGGCTTGTT 58.508 41.667 0.00 0.00 0.00 2.83
624 633 3.755378 AGTGGCTTGTTCATCTTGACATC 59.245 43.478 0.00 0.00 0.00 3.06
625 634 2.743664 TGGCTTGTTCATCTTGACATCG 59.256 45.455 0.00 0.00 0.00 3.84
626 635 2.476854 GGCTTGTTCATCTTGACATCGC 60.477 50.000 0.00 0.00 0.00 4.58
630 639 3.663025 TGTTCATCTTGACATCGCTCAA 58.337 40.909 0.00 0.00 0.00 3.02
631 640 4.256110 TGTTCATCTTGACATCGCTCAAT 58.744 39.130 0.00 0.00 29.71 2.57
632 641 4.696877 TGTTCATCTTGACATCGCTCAATT 59.303 37.500 0.00 0.00 29.71 2.32
633 642 5.181811 TGTTCATCTTGACATCGCTCAATTT 59.818 36.000 0.00 0.00 29.71 1.82
634 643 5.885230 TCATCTTGACATCGCTCAATTTT 57.115 34.783 0.00 0.00 29.71 1.82
635 644 6.258230 TCATCTTGACATCGCTCAATTTTT 57.742 33.333 0.00 0.00 29.71 1.94
636 645 7.376435 TCATCTTGACATCGCTCAATTTTTA 57.624 32.000 0.00 0.00 29.71 1.52
637 646 7.466805 TCATCTTGACATCGCTCAATTTTTAG 58.533 34.615 0.00 0.00 29.71 1.85
638 647 5.631026 TCTTGACATCGCTCAATTTTTAGC 58.369 37.500 0.00 0.00 35.33 3.09
639 648 5.181056 TCTTGACATCGCTCAATTTTTAGCA 59.819 36.000 5.36 0.00 38.70 3.49
640 649 4.973396 TGACATCGCTCAATTTTTAGCAG 58.027 39.130 5.36 0.00 38.70 4.24
641 650 4.142622 TGACATCGCTCAATTTTTAGCAGG 60.143 41.667 5.36 0.00 38.70 4.85
642 651 3.758554 ACATCGCTCAATTTTTAGCAGGT 59.241 39.130 5.36 0.00 38.70 4.00
643 652 3.829886 TCGCTCAATTTTTAGCAGGTG 57.170 42.857 5.36 0.00 38.70 4.00
644 653 2.095263 TCGCTCAATTTTTAGCAGGTGC 60.095 45.455 0.00 0.00 38.70 5.01
652 661 3.079131 TTAGCAGGTGCGCTAATGG 57.921 52.632 9.73 0.00 46.80 3.16
653 662 1.095228 TTAGCAGGTGCGCTAATGGC 61.095 55.000 9.73 6.23 46.80 4.40
654 663 3.133464 GCAGGTGCGCTAATGGCA 61.133 61.111 9.73 0.00 41.91 4.92
668 677 2.744062 TGGCACAAAGGACCCATTG 58.256 52.632 6.16 6.16 31.92 2.82
669 678 0.105760 TGGCACAAAGGACCCATTGT 60.106 50.000 7.31 7.31 38.21 2.71
670 679 1.145945 TGGCACAAAGGACCCATTGTA 59.854 47.619 11.74 0.00 35.98 2.41
671 680 1.544246 GGCACAAAGGACCCATTGTAC 59.456 52.381 11.74 7.46 35.98 2.90
672 681 1.199097 GCACAAAGGACCCATTGTACG 59.801 52.381 11.74 4.11 35.98 3.67
673 682 1.810151 CACAAAGGACCCATTGTACGG 59.190 52.381 11.74 0.00 35.98 4.02
679 688 4.157607 CCCATTGTACGGGCCATC 57.842 61.111 4.39 0.00 36.72 3.51
680 689 1.531748 CCCATTGTACGGGCCATCT 59.468 57.895 4.39 0.00 36.72 2.90
681 690 0.106719 CCCATTGTACGGGCCATCTT 60.107 55.000 4.39 0.00 36.72 2.40
682 691 1.024271 CCATTGTACGGGCCATCTTG 58.976 55.000 4.39 0.00 0.00 3.02
683 692 1.024271 CATTGTACGGGCCATCTTGG 58.976 55.000 4.39 0.00 41.55 3.61
684 693 0.916086 ATTGTACGGGCCATCTTGGA 59.084 50.000 4.39 0.00 40.96 3.53
693 702 2.315925 GCCATCTTGGACATCTCGAA 57.684 50.000 0.00 0.00 40.96 3.71
694 703 1.936547 GCCATCTTGGACATCTCGAAC 59.063 52.381 0.00 0.00 40.96 3.95
695 704 2.677902 GCCATCTTGGACATCTCGAACA 60.678 50.000 0.00 0.00 40.96 3.18
696 705 2.932614 CCATCTTGGACATCTCGAACAC 59.067 50.000 0.00 0.00 40.96 3.32
697 706 2.347697 TCTTGGACATCTCGAACACG 57.652 50.000 0.00 0.00 0.00 4.49
698 707 1.067846 TCTTGGACATCTCGAACACGG 60.068 52.381 0.00 0.00 0.00 4.94
699 708 0.677288 TTGGACATCTCGAACACGGT 59.323 50.000 0.00 0.00 0.00 4.83
700 709 0.242825 TGGACATCTCGAACACGGTC 59.757 55.000 0.00 0.00 0.00 4.79
701 710 0.458025 GGACATCTCGAACACGGTCC 60.458 60.000 0.00 0.00 38.15 4.46
702 711 0.242825 GACATCTCGAACACGGTCCA 59.757 55.000 0.00 0.00 0.00 4.02
703 712 0.243907 ACATCTCGAACACGGTCCAG 59.756 55.000 0.00 0.00 0.00 3.86
704 713 0.458543 CATCTCGAACACGGTCCAGG 60.459 60.000 0.00 0.00 0.00 4.45
705 714 0.611062 ATCTCGAACACGGTCCAGGA 60.611 55.000 0.00 0.00 0.00 3.86
706 715 0.611062 TCTCGAACACGGTCCAGGAT 60.611 55.000 0.00 0.00 0.00 3.24
707 716 0.458543 CTCGAACACGGTCCAGGATG 60.459 60.000 0.00 0.00 0.00 3.51
708 717 0.896479 TCGAACACGGTCCAGGATGA 60.896 55.000 0.00 0.00 39.69 2.92
709 718 0.175760 CGAACACGGTCCAGGATGAT 59.824 55.000 0.00 0.00 39.69 2.45
710 719 1.656652 GAACACGGTCCAGGATGATG 58.343 55.000 0.00 0.00 39.69 3.07
711 720 0.984230 AACACGGTCCAGGATGATGT 59.016 50.000 0.00 0.00 39.69 3.06
712 721 0.537188 ACACGGTCCAGGATGATGTC 59.463 55.000 0.00 0.00 39.69 3.06
727 736 7.721286 GGATGATGTCCACAAATTCTAGTAG 57.279 40.000 0.00 0.00 46.96 2.57
728 737 7.500992 GGATGATGTCCACAAATTCTAGTAGA 58.499 38.462 0.00 0.00 46.96 2.59
729 738 7.987458 GGATGATGTCCACAAATTCTAGTAGAA 59.013 37.037 14.87 14.87 46.96 2.10
730 739 9.553064 GATGATGTCCACAAATTCTAGTAGAAT 57.447 33.333 18.01 18.01 46.22 2.40
731 740 8.722480 TGATGTCCACAAATTCTAGTAGAATG 57.278 34.615 23.08 16.51 43.67 2.67
732 741 8.321353 TGATGTCCACAAATTCTAGTAGAATGT 58.679 33.333 23.08 16.53 43.67 2.71
733 742 8.723942 ATGTCCACAAATTCTAGTAGAATGTC 57.276 34.615 23.08 10.23 43.67 3.06
734 743 7.103641 TGTCCACAAATTCTAGTAGAATGTCC 58.896 38.462 23.08 11.29 43.67 4.02
735 744 7.103641 GTCCACAAATTCTAGTAGAATGTCCA 58.896 38.462 23.08 7.71 43.67 4.02
736 745 7.770897 GTCCACAAATTCTAGTAGAATGTCCAT 59.229 37.037 23.08 7.11 43.67 3.41
737 746 7.987458 TCCACAAATTCTAGTAGAATGTCCATC 59.013 37.037 23.08 0.00 43.67 3.51
738 747 7.989741 CCACAAATTCTAGTAGAATGTCCATCT 59.010 37.037 23.08 5.80 43.67 2.90
739 748 9.039870 CACAAATTCTAGTAGAATGTCCATCTC 57.960 37.037 23.08 0.00 43.67 2.75
740 749 8.207545 ACAAATTCTAGTAGAATGTCCATCTCC 58.792 37.037 23.08 0.00 43.67 3.71
741 750 8.428063 CAAATTCTAGTAGAATGTCCATCTCCT 58.572 37.037 23.08 3.83 43.67 3.69
742 751 9.661954 AAATTCTAGTAGAATGTCCATCTCCTA 57.338 33.333 23.08 0.00 43.67 2.94
743 752 8.644374 ATTCTAGTAGAATGTCCATCTCCTAC 57.356 38.462 22.01 0.00 42.90 3.18
744 753 6.544650 TCTAGTAGAATGTCCATCTCCTACC 58.455 44.000 0.00 0.00 0.00 3.18
745 754 4.145807 AGTAGAATGTCCATCTCCTACCG 58.854 47.826 0.00 0.00 0.00 4.02
746 755 3.314307 AGAATGTCCATCTCCTACCGA 57.686 47.619 0.00 0.00 0.00 4.69
747 756 3.226777 AGAATGTCCATCTCCTACCGAG 58.773 50.000 0.00 0.00 40.30 4.63
748 757 2.757894 ATGTCCATCTCCTACCGAGT 57.242 50.000 0.00 0.00 39.84 4.18
749 758 3.878237 ATGTCCATCTCCTACCGAGTA 57.122 47.619 0.00 0.00 39.84 2.59
750 759 3.657398 TGTCCATCTCCTACCGAGTAA 57.343 47.619 0.00 0.00 39.84 2.24
751 760 3.285484 TGTCCATCTCCTACCGAGTAAC 58.715 50.000 0.00 0.00 39.84 2.50
752 761 3.053842 TGTCCATCTCCTACCGAGTAACT 60.054 47.826 0.00 0.00 39.84 2.24
753 762 3.315749 GTCCATCTCCTACCGAGTAACTG 59.684 52.174 0.00 0.00 39.84 3.16
754 763 2.034812 CCATCTCCTACCGAGTAACTGC 59.965 54.545 0.00 0.00 39.84 4.40
755 764 2.803030 TCTCCTACCGAGTAACTGCT 57.197 50.000 0.00 0.00 39.84 4.24
756 765 2.366533 TCTCCTACCGAGTAACTGCTG 58.633 52.381 0.00 0.00 39.84 4.41
757 766 2.093106 CTCCTACCGAGTAACTGCTGT 58.907 52.381 0.00 0.00 33.51 4.40
758 767 3.054875 TCTCCTACCGAGTAACTGCTGTA 60.055 47.826 0.00 0.00 39.84 2.74
759 768 3.012518 TCCTACCGAGTAACTGCTGTAC 58.987 50.000 0.00 0.00 0.00 2.90
760 769 2.098770 CCTACCGAGTAACTGCTGTACC 59.901 54.545 0.00 0.00 0.00 3.34
761 770 0.524862 ACCGAGTAACTGCTGTACCG 59.475 55.000 0.00 0.00 0.00 4.02
762 771 0.806868 CCGAGTAACTGCTGTACCGA 59.193 55.000 0.00 0.00 0.00 4.69
763 772 1.200716 CCGAGTAACTGCTGTACCGAA 59.799 52.381 0.00 0.00 0.00 4.30
764 773 2.352030 CCGAGTAACTGCTGTACCGAAA 60.352 50.000 0.00 0.00 0.00 3.46
765 774 3.311106 CGAGTAACTGCTGTACCGAAAA 58.689 45.455 0.00 0.00 0.00 2.29
766 775 3.924686 CGAGTAACTGCTGTACCGAAAAT 59.075 43.478 0.00 0.00 0.00 1.82
767 776 4.201589 CGAGTAACTGCTGTACCGAAAATG 60.202 45.833 0.00 0.00 0.00 2.32
768 777 4.890088 AGTAACTGCTGTACCGAAAATGA 58.110 39.130 0.00 0.00 0.00 2.57
769 778 4.689345 AGTAACTGCTGTACCGAAAATGAC 59.311 41.667 0.00 0.00 0.00 3.06
770 779 3.120321 ACTGCTGTACCGAAAATGACA 57.880 42.857 0.00 0.00 0.00 3.58
771 780 3.674997 ACTGCTGTACCGAAAATGACAT 58.325 40.909 0.00 0.00 0.00 3.06
772 781 3.436704 ACTGCTGTACCGAAAATGACATG 59.563 43.478 0.00 0.00 0.00 3.21
773 782 2.161410 TGCTGTACCGAAAATGACATGC 59.839 45.455 0.00 0.00 0.00 4.06
774 783 2.477863 GCTGTACCGAAAATGACATGCC 60.478 50.000 0.00 0.00 0.00 4.40
775 784 3.009723 CTGTACCGAAAATGACATGCCT 58.990 45.455 0.00 0.00 0.00 4.75
776 785 3.006940 TGTACCGAAAATGACATGCCTC 58.993 45.455 0.00 0.00 0.00 4.70
777 786 2.198827 ACCGAAAATGACATGCCTCA 57.801 45.000 0.00 0.00 0.00 3.86
778 787 2.726821 ACCGAAAATGACATGCCTCAT 58.273 42.857 0.00 0.00 31.84 2.90
779 788 2.424601 ACCGAAAATGACATGCCTCATG 59.575 45.455 5.35 5.35 46.18 3.07
804 813 9.817809 TGTGAGTCATGTATCTTTATCTTTACC 57.182 33.333 0.00 0.00 0.00 2.85
824 833 9.286170 CTTTACCTAATATTAAAGGGAGAAGGC 57.714 37.037 8.77 0.00 37.18 4.35
825 834 8.577164 TTACCTAATATTAAAGGGAGAAGGCT 57.423 34.615 8.77 0.00 37.18 4.58
826 835 7.467325 ACCTAATATTAAAGGGAGAAGGCTT 57.533 36.000 0.00 0.00 37.18 4.35
827 836 7.883823 ACCTAATATTAAAGGGAGAAGGCTTT 58.116 34.615 0.00 0.00 37.18 3.51
828 837 7.999545 ACCTAATATTAAAGGGAGAAGGCTTTC 59.000 37.037 0.00 0.00 37.18 2.62
829 838 7.998964 CCTAATATTAAAGGGAGAAGGCTTTCA 59.001 37.037 11.53 0.00 35.70 2.69
830 839 9.579932 CTAATATTAAAGGGAGAAGGCTTTCAT 57.420 33.333 11.53 0.00 35.70 2.57
832 841 9.579932 AATATTAAAGGGAGAAGGCTTTCATAG 57.420 33.333 11.53 0.00 35.70 2.23
833 842 4.936685 AAAGGGAGAAGGCTTTCATAGT 57.063 40.909 11.53 0.00 35.70 2.12
834 843 4.936685 AAGGGAGAAGGCTTTCATAGTT 57.063 40.909 11.53 0.00 35.70 2.24
835 844 4.495690 AGGGAGAAGGCTTTCATAGTTC 57.504 45.455 11.53 0.00 35.70 3.01
836 845 4.107820 AGGGAGAAGGCTTTCATAGTTCT 58.892 43.478 11.53 0.00 35.70 3.01
837 846 4.163268 AGGGAGAAGGCTTTCATAGTTCTC 59.837 45.833 11.53 0.21 41.56 2.87
839 848 5.091261 GAGAAGGCTTTCATAGTTCTCCA 57.909 43.478 11.53 0.00 38.01 3.86
840 849 5.679601 GAGAAGGCTTTCATAGTTCTCCAT 58.320 41.667 11.53 0.00 38.01 3.41
841 850 6.814954 AGAAGGCTTTCATAGTTCTCCATA 57.185 37.500 11.53 0.00 35.70 2.74
842 851 6.587273 AGAAGGCTTTCATAGTTCTCCATAC 58.413 40.000 11.53 0.00 35.70 2.39
843 852 4.950050 AGGCTTTCATAGTTCTCCATACG 58.050 43.478 0.00 0.00 0.00 3.06
844 853 4.406003 AGGCTTTCATAGTTCTCCATACGT 59.594 41.667 0.00 0.00 0.00 3.57
845 854 4.745620 GGCTTTCATAGTTCTCCATACGTC 59.254 45.833 0.00 0.00 0.00 4.34
846 855 5.348986 GCTTTCATAGTTCTCCATACGTCA 58.651 41.667 0.00 0.00 0.00 4.35
847 856 5.232414 GCTTTCATAGTTCTCCATACGTCAC 59.768 44.000 0.00 0.00 0.00 3.67
848 857 4.913335 TCATAGTTCTCCATACGTCACC 57.087 45.455 0.00 0.00 0.00 4.02
849 858 4.533815 TCATAGTTCTCCATACGTCACCT 58.466 43.478 0.00 0.00 0.00 4.00
850 859 4.579340 TCATAGTTCTCCATACGTCACCTC 59.421 45.833 0.00 0.00 0.00 3.85
851 860 3.088789 AGTTCTCCATACGTCACCTCT 57.911 47.619 0.00 0.00 0.00 3.69
852 861 3.432378 AGTTCTCCATACGTCACCTCTT 58.568 45.455 0.00 0.00 0.00 2.85
853 862 3.833070 AGTTCTCCATACGTCACCTCTTT 59.167 43.478 0.00 0.00 0.00 2.52
854 863 5.014858 AGTTCTCCATACGTCACCTCTTTA 58.985 41.667 0.00 0.00 0.00 1.85
855 864 5.657302 AGTTCTCCATACGTCACCTCTTTAT 59.343 40.000 0.00 0.00 0.00 1.40
856 865 6.832384 AGTTCTCCATACGTCACCTCTTTATA 59.168 38.462 0.00 0.00 0.00 0.98
857 866 7.506261 AGTTCTCCATACGTCACCTCTTTATAT 59.494 37.037 0.00 0.00 0.00 0.86
858 867 7.450124 TCTCCATACGTCACCTCTTTATATC 57.550 40.000 0.00 0.00 0.00 1.63
859 868 6.433404 TCTCCATACGTCACCTCTTTATATCC 59.567 42.308 0.00 0.00 0.00 2.59
860 869 5.182570 TCCATACGTCACCTCTTTATATCCG 59.817 44.000 0.00 0.00 0.00 4.18
861 870 5.048224 CCATACGTCACCTCTTTATATCCGT 60.048 44.000 0.00 0.00 0.00 4.69
862 871 4.996788 ACGTCACCTCTTTATATCCGTT 57.003 40.909 0.00 0.00 0.00 4.44
863 872 7.308770 CCATACGTCACCTCTTTATATCCGTTA 60.309 40.741 0.00 0.00 0.00 3.18
864 873 6.455360 ACGTCACCTCTTTATATCCGTTAA 57.545 37.500 0.00 0.00 0.00 2.01
865 874 7.047460 ACGTCACCTCTTTATATCCGTTAAT 57.953 36.000 0.00 0.00 0.00 1.40
866 875 7.495055 ACGTCACCTCTTTATATCCGTTAATT 58.505 34.615 0.00 0.00 0.00 1.40
867 876 7.983484 ACGTCACCTCTTTATATCCGTTAATTT 59.017 33.333 0.00 0.00 0.00 1.82
868 877 8.823818 CGTCACCTCTTTATATCCGTTAATTTT 58.176 33.333 0.00 0.00 0.00 1.82
869 878 9.931210 GTCACCTCTTTATATCCGTTAATTTTG 57.069 33.333 0.00 0.00 0.00 2.44
870 879 9.675464 TCACCTCTTTATATCCGTTAATTTTGT 57.325 29.630 0.00 0.00 0.00 2.83
871 880 9.716507 CACCTCTTTATATCCGTTAATTTTGTG 57.283 33.333 0.00 0.00 0.00 3.33
872 881 9.457436 ACCTCTTTATATCCGTTAATTTTGTGT 57.543 29.630 0.00 0.00 0.00 3.72
914 923 8.803201 TGACTGAGATTAAAAGTAGATATGCG 57.197 34.615 0.00 0.00 0.00 4.73
915 924 8.630037 TGACTGAGATTAAAAGTAGATATGCGA 58.370 33.333 0.00 0.00 0.00 5.10
916 925 9.464714 GACTGAGATTAAAAGTAGATATGCGAA 57.535 33.333 0.00 0.00 0.00 4.70
917 926 9.817809 ACTGAGATTAAAAGTAGATATGCGAAA 57.182 29.630 0.00 0.00 0.00 3.46
919 928 8.752254 TGAGATTAAAAGTAGATATGCGAAACG 58.248 33.333 0.00 0.00 0.00 3.60
920 929 8.073355 AGATTAAAAGTAGATATGCGAAACGG 57.927 34.615 0.00 0.00 0.00 4.44
921 930 7.709613 AGATTAAAAGTAGATATGCGAAACGGT 59.290 33.333 0.00 0.00 0.00 4.83
922 931 7.599630 TTAAAAGTAGATATGCGAAACGGTT 57.400 32.000 0.00 0.00 0.00 4.44
923 932 5.713822 AAAGTAGATATGCGAAACGGTTC 57.286 39.130 2.16 2.16 0.00 3.62
932 941 1.773496 GAAACGGTTCGCTCACTCG 59.227 57.895 0.00 0.00 0.00 4.18
933 942 0.938168 GAAACGGTTCGCTCACTCGT 60.938 55.000 0.00 0.00 35.48 4.18
934 943 0.311790 AAACGGTTCGCTCACTCGTA 59.688 50.000 0.00 0.00 33.52 3.43
935 944 0.109873 AACGGTTCGCTCACTCGTAG 60.110 55.000 0.00 0.00 33.52 3.51
936 945 1.226323 CGGTTCGCTCACTCGTAGG 60.226 63.158 0.00 0.00 0.00 3.18
937 946 1.139095 GGTTCGCTCACTCGTAGGG 59.861 63.158 0.00 0.00 0.00 3.53
938 947 1.516603 GTTCGCTCACTCGTAGGGC 60.517 63.158 0.00 0.00 0.00 5.19
939 948 1.974875 TTCGCTCACTCGTAGGGCA 60.975 57.895 0.00 0.00 0.00 5.36
940 949 1.320344 TTCGCTCACTCGTAGGGCAT 61.320 55.000 0.00 0.00 0.00 4.40
941 950 1.589993 CGCTCACTCGTAGGGCATG 60.590 63.158 0.00 0.00 0.00 4.06
942 951 1.884926 GCTCACTCGTAGGGCATGC 60.885 63.158 9.90 9.90 0.00 4.06
943 952 1.517361 CTCACTCGTAGGGCATGCA 59.483 57.895 21.36 0.00 0.00 3.96
944 953 0.807667 CTCACTCGTAGGGCATGCAC 60.808 60.000 21.36 17.78 0.00 4.57
945 954 1.079197 CACTCGTAGGGCATGCACA 60.079 57.895 24.51 5.22 0.00 4.57
946 955 1.079127 ACTCGTAGGGCATGCACAC 60.079 57.895 24.51 16.68 0.00 3.82
947 956 1.219124 CTCGTAGGGCATGCACACT 59.781 57.895 24.51 17.45 0.00 3.55
948 957 0.807667 CTCGTAGGGCATGCACACTC 60.808 60.000 24.51 10.70 0.00 3.51
949 958 1.815421 CGTAGGGCATGCACACTCC 60.815 63.158 24.51 12.47 0.00 3.85
950 959 1.604378 GTAGGGCATGCACACTCCT 59.396 57.895 24.51 19.30 0.00 3.69
951 960 0.462759 GTAGGGCATGCACACTCCTC 60.463 60.000 24.51 7.95 0.00 3.71
952 961 1.960040 TAGGGCATGCACACTCCTCG 61.960 60.000 24.51 0.00 0.00 4.63
953 962 2.046892 GGCATGCACACTCCTCGT 60.047 61.111 21.36 0.00 0.00 4.18
954 963 1.672356 GGCATGCACACTCCTCGTT 60.672 57.895 21.36 0.00 0.00 3.85
955 964 1.499056 GCATGCACACTCCTCGTTG 59.501 57.895 14.21 0.00 0.00 4.10
956 965 1.230635 GCATGCACACTCCTCGTTGT 61.231 55.000 14.21 0.00 0.00 3.32
957 966 0.514255 CATGCACACTCCTCGTTGTG 59.486 55.000 0.00 0.00 39.80 3.33
959 968 3.642755 CACACTCCTCGTTGTGCC 58.357 61.111 0.00 0.00 37.68 5.01
960 969 1.069765 CACACTCCTCGTTGTGCCT 59.930 57.895 0.00 0.00 37.68 4.75
961 970 0.946221 CACACTCCTCGTTGTGCCTC 60.946 60.000 0.00 0.00 37.68 4.70
962 971 1.734477 CACTCCTCGTTGTGCCTCG 60.734 63.158 0.00 0.00 0.00 4.63
963 972 2.201022 ACTCCTCGTTGTGCCTCGT 61.201 57.895 0.00 0.00 0.00 4.18
964 973 1.444553 CTCCTCGTTGTGCCTCGTC 60.445 63.158 0.00 0.00 0.00 4.20
965 974 2.432628 CCTCGTTGTGCCTCGTCC 60.433 66.667 0.00 0.00 0.00 4.79
966 975 2.432628 CTCGTTGTGCCTCGTCCC 60.433 66.667 0.00 0.00 0.00 4.46
967 976 4.351938 TCGTTGTGCCTCGTCCCG 62.352 66.667 0.00 0.00 0.00 5.14
969 978 4.681978 GTTGTGCCTCGTCCCGCT 62.682 66.667 0.00 0.00 0.00 5.52
970 979 4.373116 TTGTGCCTCGTCCCGCTC 62.373 66.667 0.00 0.00 0.00 5.03
975 984 3.470888 CCTCGTCCCGCTCCCAAT 61.471 66.667 0.00 0.00 0.00 3.16
976 985 2.202932 CTCGTCCCGCTCCCAATG 60.203 66.667 0.00 0.00 0.00 2.82
977 986 4.467084 TCGTCCCGCTCCCAATGC 62.467 66.667 0.00 0.00 0.00 3.56
979 988 4.115199 GTCCCGCTCCCAATGCCT 62.115 66.667 0.00 0.00 0.00 4.75
980 989 2.366301 TCCCGCTCCCAATGCCTA 60.366 61.111 0.00 0.00 0.00 3.93
981 990 1.998438 TCCCGCTCCCAATGCCTAA 60.998 57.895 0.00 0.00 0.00 2.69
982 991 1.526917 CCCGCTCCCAATGCCTAAG 60.527 63.158 0.00 0.00 0.00 2.18
983 992 1.224592 CCGCTCCCAATGCCTAAGT 59.775 57.895 0.00 0.00 0.00 2.24
984 993 1.097547 CCGCTCCCAATGCCTAAGTG 61.098 60.000 0.00 0.00 0.00 3.16
985 994 1.097547 CGCTCCCAATGCCTAAGTGG 61.098 60.000 0.00 0.00 39.35 4.00
986 995 0.034089 GCTCCCAATGCCTAAGTGGT 60.034 55.000 0.00 0.00 38.35 4.16
987 996 2.019156 GCTCCCAATGCCTAAGTGGTC 61.019 57.143 0.00 0.00 38.35 4.02
988 997 0.623723 TCCCAATGCCTAAGTGGTCC 59.376 55.000 0.00 0.00 38.35 4.46
989 998 0.625849 CCCAATGCCTAAGTGGTCCT 59.374 55.000 0.00 0.00 38.35 3.85
990 999 1.005924 CCCAATGCCTAAGTGGTCCTT 59.994 52.381 0.00 0.00 38.35 3.36
991 1000 2.369394 CCAATGCCTAAGTGGTCCTTC 58.631 52.381 0.00 0.00 38.35 3.46
992 1001 2.290896 CCAATGCCTAAGTGGTCCTTCA 60.291 50.000 0.00 0.00 38.35 3.02
993 1002 3.420893 CAATGCCTAAGTGGTCCTTCAA 58.579 45.455 0.00 0.00 38.35 2.69
994 1003 2.859165 TGCCTAAGTGGTCCTTCAAG 57.141 50.000 0.00 0.00 38.35 3.02
995 1004 2.334977 TGCCTAAGTGGTCCTTCAAGA 58.665 47.619 0.00 0.00 38.35 3.02
996 1005 2.038557 TGCCTAAGTGGTCCTTCAAGAC 59.961 50.000 0.00 0.00 38.35 3.01
997 1006 2.303311 GCCTAAGTGGTCCTTCAAGACT 59.697 50.000 0.00 0.00 36.95 3.24
998 1007 3.244596 GCCTAAGTGGTCCTTCAAGACTT 60.245 47.826 0.00 0.00 36.95 3.01
999 1008 4.020485 GCCTAAGTGGTCCTTCAAGACTTA 60.020 45.833 0.00 0.00 36.95 2.24
1000 1009 5.512576 GCCTAAGTGGTCCTTCAAGACTTAA 60.513 44.000 0.00 0.00 36.95 1.85
1001 1010 6.712276 CCTAAGTGGTCCTTCAAGACTTAAT 58.288 40.000 0.00 0.00 36.95 1.40
1002 1011 6.595716 CCTAAGTGGTCCTTCAAGACTTAATG 59.404 42.308 0.00 0.00 36.95 1.90
1003 1012 4.911390 AGTGGTCCTTCAAGACTTAATGG 58.089 43.478 0.00 0.00 36.95 3.16
1004 1013 4.010349 GTGGTCCTTCAAGACTTAATGGG 58.990 47.826 0.00 0.00 36.95 4.00
1005 1014 3.017442 GGTCCTTCAAGACTTAATGGGC 58.983 50.000 0.00 0.00 36.95 5.36
1006 1015 3.017442 GTCCTTCAAGACTTAATGGGCC 58.983 50.000 0.00 0.00 33.79 5.80
1007 1016 2.025321 TCCTTCAAGACTTAATGGGCCC 60.025 50.000 17.59 17.59 0.00 5.80
1008 1017 2.291540 CCTTCAAGACTTAATGGGCCCA 60.292 50.000 30.92 30.92 0.00 5.36
1009 1018 2.806945 TCAAGACTTAATGGGCCCAG 57.193 50.000 31.97 19.19 0.00 4.45
1010 1019 1.106285 CAAGACTTAATGGGCCCAGC 58.894 55.000 31.97 14.34 0.00 4.85
1011 1020 1.002857 AAGACTTAATGGGCCCAGCT 58.997 50.000 31.97 21.95 0.00 4.24
1012 1021 1.893315 AGACTTAATGGGCCCAGCTA 58.107 50.000 31.97 20.81 0.00 3.32
1013 1022 2.422746 AGACTTAATGGGCCCAGCTAT 58.577 47.619 31.97 18.18 0.00 2.97
1014 1023 2.785857 AGACTTAATGGGCCCAGCTATT 59.214 45.455 31.97 21.67 0.00 1.73
1015 1024 3.205282 AGACTTAATGGGCCCAGCTATTT 59.795 43.478 31.97 21.27 0.00 1.40
1016 1025 3.566351 ACTTAATGGGCCCAGCTATTTC 58.434 45.455 31.97 0.00 0.00 2.17
1017 1026 2.270352 TAATGGGCCCAGCTATTTCG 57.730 50.000 31.97 0.00 0.00 3.46
1018 1027 0.258774 AATGGGCCCAGCTATTTCGT 59.741 50.000 31.97 6.79 0.00 3.85
1019 1028 0.179018 ATGGGCCCAGCTATTTCGTC 60.179 55.000 31.97 0.00 0.00 4.20
1020 1029 1.526225 GGGCCCAGCTATTTCGTCC 60.526 63.158 19.95 0.00 0.00 4.79
1021 1030 1.887707 GGCCCAGCTATTTCGTCCG 60.888 63.158 0.00 0.00 0.00 4.79
1022 1031 2.534903 GCCCAGCTATTTCGTCCGC 61.535 63.158 0.00 0.00 0.00 5.54
1023 1032 1.887707 CCCAGCTATTTCGTCCGCC 60.888 63.158 0.00 0.00 0.00 6.13
1024 1033 1.153449 CCAGCTATTTCGTCCGCCA 60.153 57.895 0.00 0.00 0.00 5.69
1025 1034 0.742990 CCAGCTATTTCGTCCGCCAA 60.743 55.000 0.00 0.00 0.00 4.52
1026 1035 1.299541 CAGCTATTTCGTCCGCCAAT 58.700 50.000 0.00 0.00 0.00 3.16
1027 1036 1.003545 CAGCTATTTCGTCCGCCAATG 60.004 52.381 0.00 0.00 0.00 2.82
1028 1037 0.317020 GCTATTTCGTCCGCCAATGC 60.317 55.000 0.00 0.00 0.00 3.56
1038 1047 3.512516 GCCAATGCGTCTCCTGCC 61.513 66.667 0.00 0.00 0.00 4.85
1039 1048 2.046023 CCAATGCGTCTCCTGCCA 60.046 61.111 0.00 0.00 0.00 4.92
1040 1049 2.110967 CCAATGCGTCTCCTGCCAG 61.111 63.158 0.00 0.00 0.00 4.85
1041 1050 2.437359 AATGCGTCTCCTGCCAGC 60.437 61.111 0.00 0.00 0.00 4.85
1042 1051 4.827087 ATGCGTCTCCTGCCAGCG 62.827 66.667 0.00 0.00 0.00 5.18
1045 1054 4.827087 CGTCTCCTGCCAGCGCAT 62.827 66.667 11.47 0.00 46.11 4.73
1046 1055 3.200593 GTCTCCTGCCAGCGCATG 61.201 66.667 11.47 4.88 46.11 4.06
1047 1056 3.709633 TCTCCTGCCAGCGCATGT 61.710 61.111 11.47 0.00 46.11 3.21
1048 1057 3.200593 CTCCTGCCAGCGCATGTC 61.201 66.667 11.47 0.00 46.11 3.06
1049 1058 3.677284 CTCCTGCCAGCGCATGTCT 62.677 63.158 11.47 0.00 46.11 3.41
1050 1059 3.200593 CCTGCCAGCGCATGTCTC 61.201 66.667 11.47 0.00 46.11 3.36
1051 1060 2.125229 CTGCCAGCGCATGTCTCT 60.125 61.111 11.47 0.00 46.11 3.10
1052 1061 1.744368 CTGCCAGCGCATGTCTCTT 60.744 57.895 11.47 0.00 46.11 2.85
1053 1062 1.978712 CTGCCAGCGCATGTCTCTTG 61.979 60.000 11.47 0.00 46.11 3.02
1054 1063 2.789917 CCAGCGCATGTCTCTTGC 59.210 61.111 11.47 0.00 36.74 4.01
1055 1064 2.758089 CCAGCGCATGTCTCTTGCC 61.758 63.158 11.47 0.00 36.75 4.52
1056 1065 2.816958 AGCGCATGTCTCTTGCCG 60.817 61.111 11.47 0.00 36.75 5.69
1057 1066 2.815211 GCGCATGTCTCTTGCCGA 60.815 61.111 0.30 0.00 36.75 5.54
1058 1067 2.176273 GCGCATGTCTCTTGCCGAT 61.176 57.895 0.30 0.00 36.75 4.18
1059 1068 1.709147 GCGCATGTCTCTTGCCGATT 61.709 55.000 0.30 0.00 36.75 3.34
1060 1069 0.729116 CGCATGTCTCTTGCCGATTT 59.271 50.000 0.00 0.00 36.75 2.17
1061 1070 1.131126 CGCATGTCTCTTGCCGATTTT 59.869 47.619 0.00 0.00 36.75 1.82
1062 1071 2.414559 CGCATGTCTCTTGCCGATTTTT 60.415 45.455 0.00 0.00 36.75 1.94
1081 1090 3.918258 TTTTAGACGCACGCACATATC 57.082 42.857 0.00 0.00 0.00 1.63
1082 1091 2.863401 TTAGACGCACGCACATATCT 57.137 45.000 0.00 0.00 0.00 1.98
1083 1092 3.974871 TTAGACGCACGCACATATCTA 57.025 42.857 0.00 0.00 0.00 1.98
1084 1093 2.121116 AGACGCACGCACATATCTAC 57.879 50.000 0.00 0.00 0.00 2.59
1085 1094 1.676529 AGACGCACGCACATATCTACT 59.323 47.619 0.00 0.00 0.00 2.57
1086 1095 2.099263 AGACGCACGCACATATCTACTT 59.901 45.455 0.00 0.00 0.00 2.24
1087 1096 2.460918 ACGCACGCACATATCTACTTC 58.539 47.619 0.00 0.00 0.00 3.01
1088 1097 1.787155 CGCACGCACATATCTACTTCC 59.213 52.381 0.00 0.00 0.00 3.46
1089 1098 2.543861 CGCACGCACATATCTACTTCCT 60.544 50.000 0.00 0.00 0.00 3.36
1090 1099 3.053455 GCACGCACATATCTACTTCCTC 58.947 50.000 0.00 0.00 0.00 3.71
1091 1100 3.300857 CACGCACATATCTACTTCCTCG 58.699 50.000 0.00 0.00 0.00 4.63
1092 1101 2.293677 ACGCACATATCTACTTCCTCGG 59.706 50.000 0.00 0.00 0.00 4.63
1104 1113 4.684484 ACTTCCTCGGTATATTTCCCAC 57.316 45.455 0.00 0.00 0.00 4.61
1234 1252 8.931568 GGATTACCAGGTAAGGAGATAAACTTA 58.068 37.037 17.31 0.00 31.29 2.24
1285 1312 2.529151 GGCAACTGCGGAATTATGTTG 58.471 47.619 0.00 2.26 43.26 3.33
1291 1318 5.545658 ACTGCGGAATTATGTTGTTAGTG 57.454 39.130 0.00 0.00 0.00 2.74
1717 4023 5.528043 TTAATTGCAGGACACAAACATGT 57.472 34.783 0.00 0.00 34.78 3.21
1719 4025 3.980646 TTGCAGGACACAAACATGTAC 57.019 42.857 0.00 0.00 33.11 2.90
1784 4090 3.763319 CGTTCGCGTCTTGGGTAG 58.237 61.111 5.77 0.00 35.57 3.18
1837 4176 0.753479 TGCCAAACCAACACCGACAT 60.753 50.000 0.00 0.00 0.00 3.06
2124 4470 6.398918 AGTCTGCTCGTCATAACATTTTAGT 58.601 36.000 0.00 0.00 0.00 2.24
2295 4645 3.700538 CCCAATTGATCAACTCTGGGAA 58.299 45.455 31.11 3.73 45.43 3.97
2332 4686 6.553100 AGCTACTAGAATTAGCAGGACTGATT 59.447 38.462 12.04 0.00 43.85 2.57
2470 4828 8.745837 CAATATTGTTGATTGCCTAACGATTTC 58.254 33.333 7.32 0.00 33.92 2.17
2633 5026 6.018588 CCCATGTGCATTTAATAATGTTGCTG 60.019 38.462 0.00 0.00 42.56 4.41
2667 5060 3.012518 AGGAATTCTGCATTTCCTCACG 58.987 45.455 16.13 0.00 47.00 4.35
2669 5062 2.787473 ATTCTGCATTTCCTCACGGA 57.213 45.000 0.00 0.00 37.60 4.69
2768 5161 1.755179 AATCAGCAATTGGGAGGTCG 58.245 50.000 7.72 0.00 0.00 4.79
2798 5191 1.891150 ACCAAGGCAAGCATTCTCTTG 59.109 47.619 0.00 0.00 44.63 3.02
2925 5323 2.969821 TGCTGGTTTGGAGGTATTGT 57.030 45.000 0.00 0.00 0.00 2.71
3034 5435 2.985847 AGCGGCAACAGAAAGGCC 60.986 61.111 1.45 0.00 44.27 5.19
3261 5663 1.198713 GTCATTCTCTGCTCAGGGGA 58.801 55.000 0.00 0.00 0.00 4.81
3366 5838 3.508012 CGATCGATCTAGTTCAGGGGAAT 59.492 47.826 22.43 0.00 35.05 3.01
3378 5851 0.545071 AGGGGAATGGTTTGCAAGGG 60.545 55.000 0.00 0.00 0.00 3.95
3417 5894 4.789807 AGATGAGGTGAATTGAGGAATGG 58.210 43.478 0.00 0.00 0.00 3.16
3431 5909 8.954834 ATTGAGGAATGGCATTTGGTTATATA 57.045 30.769 14.93 0.00 0.00 0.86
3480 6037 1.588674 AAGTGCCGTGAAAATGTCGA 58.411 45.000 0.00 0.00 0.00 4.20
3557 6119 6.926272 GTGGGTTTCATAGCACTATCTTCTAG 59.074 42.308 0.00 0.00 0.00 2.43
3569 6258 6.419413 GCACTATCTTCTAGATTGAGGTTTCG 59.581 42.308 0.00 0.00 36.20 3.46
3724 6426 3.421844 GTTCCTAAGGCAGTCAACCAAT 58.578 45.455 0.00 0.00 0.00 3.16
3725 6427 3.071874 TCCTAAGGCAGTCAACCAATG 57.928 47.619 0.00 0.00 0.00 2.82
3943 6649 1.073199 AGAGGTTGACCAAAGCCCG 59.927 57.895 2.56 0.00 36.93 6.13
3948 6654 1.894756 TTGACCAAAGCCCGTTCCG 60.895 57.895 0.00 0.00 0.00 4.30
3964 6670 0.322456 TCCGTTGAAGGGGAATGCTG 60.322 55.000 3.86 0.00 0.00 4.41
4013 6720 6.210287 AGTTGTAGAAGCTGTACTGGATAC 57.790 41.667 7.76 0.00 0.00 2.24
4107 6814 1.271379 CGATTTCACACCTCCCAACCT 60.271 52.381 0.00 0.00 0.00 3.50
4112 6819 1.152756 ACACCTCCCAACCTTGCAC 60.153 57.895 0.00 0.00 0.00 4.57
4198 6918 8.659925 AAGAGTGCTAATTCTAGTTCATCATG 57.340 34.615 0.00 0.00 0.00 3.07
4212 6932 3.982475 TCATCATGTCGCCTAGATCAAC 58.018 45.455 0.00 0.00 0.00 3.18
4278 6999 7.253422 CGAGCAAAAATATCTGGATGAAAACT 58.747 34.615 0.00 0.00 0.00 2.66
4295 7016 7.546250 TGAAAACTAATTTTTGCCATAGGGA 57.454 32.000 0.00 0.00 38.17 4.20
4296 7017 8.144862 TGAAAACTAATTTTTGCCATAGGGAT 57.855 30.769 0.00 0.00 38.17 3.85
4297 7018 8.601546 TGAAAACTAATTTTTGCCATAGGGATT 58.398 29.630 0.00 0.00 38.17 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 60 2.094442 TCCGTTGAAGTCGATGTATGCA 60.094 45.455 0.00 0.00 0.00 3.96
105 108 5.333513 GTGTGTTTGGAATTGTTTCGTACA 58.666 37.500 0.00 0.00 32.28 2.90
110 113 5.236263 GGAATGGTGTGTTTGGAATTGTTTC 59.764 40.000 0.00 0.00 0.00 2.78
111 114 5.122519 GGAATGGTGTGTTTGGAATTGTTT 58.877 37.500 0.00 0.00 0.00 2.83
151 154 5.292101 CCTCTGCTGTGCTACTTTATTGTAC 59.708 44.000 0.00 0.00 0.00 2.90
154 157 4.507710 TCCTCTGCTGTGCTACTTTATTG 58.492 43.478 0.00 0.00 0.00 1.90
155 158 4.223923 ACTCCTCTGCTGTGCTACTTTATT 59.776 41.667 0.00 0.00 0.00 1.40
157 160 3.165875 ACTCCTCTGCTGTGCTACTTTA 58.834 45.455 0.00 0.00 0.00 1.85
169 172 5.640189 TTGTAGTACAAGTACTCCTCTGC 57.360 43.478 15.57 0.00 44.58 4.26
217 226 5.232414 CGAGTAGGCTTGCATCTTAGTTAAC 59.768 44.000 0.00 0.00 0.00 2.01
241 250 0.099082 GGGAGATGAGTGACGACGAC 59.901 60.000 0.00 0.00 0.00 4.34
309 318 5.266242 GTGACAAATTAATCATCGTGCTCC 58.734 41.667 0.00 0.00 0.00 4.70
318 327 3.930229 CGACGAGGGTGACAAATTAATCA 59.070 43.478 0.00 0.00 0.00 2.57
325 334 1.300620 CTGCGACGAGGGTGACAAA 60.301 57.895 0.00 0.00 0.00 2.83
333 342 1.073216 CAACTGCTACTGCGACGAGG 61.073 60.000 0.00 0.00 43.34 4.63
362 371 2.715046 TGTCATCAATGGTTCTCTGGC 58.285 47.619 0.00 0.00 0.00 4.85
396 405 2.290008 ACCACATACTCCATGTTGCGAA 60.290 45.455 0.00 0.00 46.01 4.70
398 407 1.737838 ACCACATACTCCATGTTGCG 58.262 50.000 0.00 0.00 46.01 4.85
406 415 0.740737 GCATGGCAACCACATACTCC 59.259 55.000 0.00 0.00 35.80 3.85
412 421 0.830866 TGATTGGCATGGCAACCACA 60.831 50.000 34.01 27.92 35.80 4.17
438 447 3.163594 GGTGACTTGCGAATTTTCATCG 58.836 45.455 0.00 0.00 42.99 3.84
453 462 2.834549 CAGAATCAGGGTAGTGGTGACT 59.165 50.000 0.00 0.00 36.07 3.41
457 466 1.656587 TGCAGAATCAGGGTAGTGGT 58.343 50.000 0.00 0.00 0.00 4.16
474 483 2.485426 TGCTGTAGTGCTTGAGAAATGC 59.515 45.455 0.00 0.00 0.00 3.56
489 498 1.045407 AGAAACTCCCACGTGCTGTA 58.955 50.000 10.91 0.00 0.00 2.74
583 592 4.274459 CCACTCCTAGTAAGATTGCATTGC 59.726 45.833 0.46 0.46 0.00 3.56
612 621 5.885230 AAAATTGAGCGATGTCAAGATGA 57.115 34.783 0.00 0.00 39.78 2.92
624 633 2.253603 GCACCTGCTAAAAATTGAGCG 58.746 47.619 0.00 0.00 41.83 5.03
625 634 2.253603 CGCACCTGCTAAAAATTGAGC 58.746 47.619 0.00 0.00 39.32 4.26
626 635 2.095059 AGCGCACCTGCTAAAAATTGAG 60.095 45.455 11.47 0.00 45.14 3.02
635 644 1.523711 GCCATTAGCGCACCTGCTA 60.524 57.895 11.47 0.00 45.14 3.49
645 654 0.817654 GGGTCCTTTGTGCCATTAGC 59.182 55.000 0.00 0.00 44.14 3.09
646 655 2.214376 TGGGTCCTTTGTGCCATTAG 57.786 50.000 0.00 0.00 0.00 1.73
647 656 2.830923 CAATGGGTCCTTTGTGCCATTA 59.169 45.455 0.00 0.00 29.11 1.90
648 657 1.624813 CAATGGGTCCTTTGTGCCATT 59.375 47.619 0.00 0.00 0.00 3.16
649 658 1.269012 CAATGGGTCCTTTGTGCCAT 58.731 50.000 7.28 0.00 0.00 4.40
650 659 0.105760 ACAATGGGTCCTTTGTGCCA 60.106 50.000 17.04 0.00 40.96 4.92
651 660 1.544246 GTACAATGGGTCCTTTGTGCC 59.456 52.381 23.24 13.94 41.97 5.01
652 661 1.199097 CGTACAATGGGTCCTTTGTGC 59.801 52.381 23.24 21.25 41.97 4.57
653 662 1.810151 CCGTACAATGGGTCCTTTGTG 59.190 52.381 23.24 12.44 41.97 3.33
654 663 1.271707 CCCGTACAATGGGTCCTTTGT 60.272 52.381 20.17 20.17 43.52 2.83
655 664 1.459450 CCCGTACAATGGGTCCTTTG 58.541 55.000 12.33 12.33 39.68 2.77
656 665 0.323087 GCCCGTACAATGGGTCCTTT 60.323 55.000 6.09 0.00 46.50 3.11
657 666 1.301954 GCCCGTACAATGGGTCCTT 59.698 57.895 6.09 0.00 46.50 3.36
658 667 2.676265 GGCCCGTACAATGGGTCCT 61.676 63.158 6.09 0.00 43.36 3.85
659 668 2.124445 GGCCCGTACAATGGGTCC 60.124 66.667 6.09 4.39 43.36 4.46
661 670 1.226262 GATGGCCCGTACAATGGGT 59.774 57.895 0.00 0.00 46.50 4.51
663 672 1.024271 CAAGATGGCCCGTACAATGG 58.976 55.000 0.00 0.00 0.00 3.16
664 673 1.024271 CCAAGATGGCCCGTACAATG 58.976 55.000 0.00 0.00 0.00 2.82
665 674 0.916086 TCCAAGATGGCCCGTACAAT 59.084 50.000 0.00 0.00 37.47 2.71
666 675 0.035820 GTCCAAGATGGCCCGTACAA 60.036 55.000 0.00 0.00 37.47 2.41
667 676 1.195442 TGTCCAAGATGGCCCGTACA 61.195 55.000 0.00 0.00 37.47 2.90
668 677 0.180406 ATGTCCAAGATGGCCCGTAC 59.820 55.000 0.00 0.00 37.47 3.67
669 678 0.468226 GATGTCCAAGATGGCCCGTA 59.532 55.000 0.00 0.00 37.47 4.02
670 679 1.224592 GATGTCCAAGATGGCCCGT 59.775 57.895 0.00 0.00 37.47 5.28
671 680 0.533755 GAGATGTCCAAGATGGCCCG 60.534 60.000 0.00 0.00 37.47 6.13
672 681 0.533755 CGAGATGTCCAAGATGGCCC 60.534 60.000 0.00 0.00 37.47 5.80
673 682 0.465705 TCGAGATGTCCAAGATGGCC 59.534 55.000 0.00 0.00 37.47 5.36
674 683 1.936547 GTTCGAGATGTCCAAGATGGC 59.063 52.381 0.00 0.00 37.47 4.40
675 684 2.932614 GTGTTCGAGATGTCCAAGATGG 59.067 50.000 0.00 0.00 39.43 3.51
676 685 2.600420 CGTGTTCGAGATGTCCAAGATG 59.400 50.000 0.00 0.00 39.71 2.90
677 686 2.417379 CCGTGTTCGAGATGTCCAAGAT 60.417 50.000 0.00 0.00 39.71 2.40
678 687 1.067846 CCGTGTTCGAGATGTCCAAGA 60.068 52.381 0.00 0.00 39.71 3.02
679 688 1.336887 ACCGTGTTCGAGATGTCCAAG 60.337 52.381 0.00 0.00 39.71 3.61
680 689 0.677288 ACCGTGTTCGAGATGTCCAA 59.323 50.000 0.00 0.00 39.71 3.53
681 690 0.242825 GACCGTGTTCGAGATGTCCA 59.757 55.000 0.00 0.00 39.71 4.02
682 691 0.458025 GGACCGTGTTCGAGATGTCC 60.458 60.000 6.10 6.10 37.45 4.02
683 692 0.242825 TGGACCGTGTTCGAGATGTC 59.757 55.000 0.00 0.00 39.71 3.06
684 693 0.243907 CTGGACCGTGTTCGAGATGT 59.756 55.000 0.00 0.00 39.71 3.06
685 694 0.458543 CCTGGACCGTGTTCGAGATG 60.459 60.000 0.00 0.00 39.71 2.90
686 695 0.611062 TCCTGGACCGTGTTCGAGAT 60.611 55.000 0.00 0.00 39.71 2.75
687 696 0.611062 ATCCTGGACCGTGTTCGAGA 60.611 55.000 0.00 0.00 39.71 4.04
688 697 0.458543 CATCCTGGACCGTGTTCGAG 60.459 60.000 0.00 0.00 39.71 4.04
689 698 0.896479 TCATCCTGGACCGTGTTCGA 60.896 55.000 0.00 0.00 39.71 3.71
690 699 0.175760 ATCATCCTGGACCGTGTTCG 59.824 55.000 0.00 0.00 0.00 3.95
691 700 1.066143 ACATCATCCTGGACCGTGTTC 60.066 52.381 0.00 0.00 0.00 3.18
692 701 0.984230 ACATCATCCTGGACCGTGTT 59.016 50.000 0.00 0.00 0.00 3.32
693 702 0.537188 GACATCATCCTGGACCGTGT 59.463 55.000 0.00 3.86 0.00 4.49
694 703 0.179073 GGACATCATCCTGGACCGTG 60.179 60.000 0.00 0.26 45.22 4.94
695 704 2.212327 GGACATCATCCTGGACCGT 58.788 57.895 0.00 0.00 45.22 4.83
704 713 8.948631 TTCTACTAGAATTTGTGGACATCATC 57.051 34.615 0.00 0.00 0.00 2.92
705 714 9.334947 CATTCTACTAGAATTTGTGGACATCAT 57.665 33.333 8.39 0.00 41.90 2.45
706 715 8.321353 ACATTCTACTAGAATTTGTGGACATCA 58.679 33.333 8.39 0.00 41.90 3.07
707 716 8.723942 ACATTCTACTAGAATTTGTGGACATC 57.276 34.615 8.39 0.00 41.90 3.06
708 717 7.770897 GGACATTCTACTAGAATTTGTGGACAT 59.229 37.037 8.39 0.00 41.90 3.06
709 718 7.103641 GGACATTCTACTAGAATTTGTGGACA 58.896 38.462 8.39 0.00 41.90 4.02
710 719 7.103641 TGGACATTCTACTAGAATTTGTGGAC 58.896 38.462 8.39 0.00 41.90 4.02
711 720 7.252612 TGGACATTCTACTAGAATTTGTGGA 57.747 36.000 8.39 0.00 41.90 4.02
712 721 7.989741 AGATGGACATTCTACTAGAATTTGTGG 59.010 37.037 8.39 1.23 41.90 4.17
713 722 8.954950 AGATGGACATTCTACTAGAATTTGTG 57.045 34.615 8.39 2.83 41.90 3.33
714 723 8.207545 GGAGATGGACATTCTACTAGAATTTGT 58.792 37.037 8.39 6.66 41.90 2.83
715 724 8.428063 AGGAGATGGACATTCTACTAGAATTTG 58.572 37.037 8.39 3.77 41.90 2.32
716 725 8.560124 AGGAGATGGACATTCTACTAGAATTT 57.440 34.615 8.39 3.22 41.90 1.82
717 726 9.084533 GTAGGAGATGGACATTCTACTAGAATT 57.915 37.037 8.39 2.06 41.90 2.17
718 727 7.672239 GGTAGGAGATGGACATTCTACTAGAAT 59.328 40.741 5.58 5.58 45.23 2.40
719 728 7.005296 GGTAGGAGATGGACATTCTACTAGAA 58.995 42.308 0.00 0.86 38.78 2.10
720 729 6.544650 GGTAGGAGATGGACATTCTACTAGA 58.455 44.000 0.00 0.00 28.46 2.43
721 730 5.413213 CGGTAGGAGATGGACATTCTACTAG 59.587 48.000 14.70 0.00 28.46 2.57
722 731 5.072736 TCGGTAGGAGATGGACATTCTACTA 59.927 44.000 14.70 8.96 0.00 1.82
723 732 4.141228 TCGGTAGGAGATGGACATTCTACT 60.141 45.833 14.70 9.62 0.00 2.57
724 733 4.142790 TCGGTAGGAGATGGACATTCTAC 58.857 47.826 10.29 10.29 0.00 2.59
725 734 4.141228 ACTCGGTAGGAGATGGACATTCTA 60.141 45.833 0.00 0.00 46.23 2.10
726 735 3.226777 CTCGGTAGGAGATGGACATTCT 58.773 50.000 0.00 0.00 46.23 2.40
727 736 2.959707 ACTCGGTAGGAGATGGACATTC 59.040 50.000 0.00 0.00 46.23 2.67
728 737 3.033659 ACTCGGTAGGAGATGGACATT 57.966 47.619 0.00 0.00 46.23 2.71
729 738 2.757894 ACTCGGTAGGAGATGGACAT 57.242 50.000 0.00 0.00 46.23 3.06
730 739 3.053842 AGTTACTCGGTAGGAGATGGACA 60.054 47.826 0.00 0.00 46.23 4.02
731 740 3.315749 CAGTTACTCGGTAGGAGATGGAC 59.684 52.174 0.00 0.00 46.23 4.02
732 741 3.552875 CAGTTACTCGGTAGGAGATGGA 58.447 50.000 0.00 0.00 46.23 3.41
733 742 2.034812 GCAGTTACTCGGTAGGAGATGG 59.965 54.545 0.00 0.00 46.23 3.51
734 743 2.952978 AGCAGTTACTCGGTAGGAGATG 59.047 50.000 0.00 0.00 46.23 2.90
735 744 2.952978 CAGCAGTTACTCGGTAGGAGAT 59.047 50.000 0.00 0.00 46.23 2.75
736 745 2.290768 ACAGCAGTTACTCGGTAGGAGA 60.291 50.000 0.00 0.00 46.23 3.71
738 747 2.211250 ACAGCAGTTACTCGGTAGGA 57.789 50.000 0.00 0.00 0.00 2.94
739 748 2.098770 GGTACAGCAGTTACTCGGTAGG 59.901 54.545 0.00 0.00 0.00 3.18
740 749 2.223203 CGGTACAGCAGTTACTCGGTAG 60.223 54.545 0.00 0.00 0.00 3.18
741 750 1.739466 CGGTACAGCAGTTACTCGGTA 59.261 52.381 0.00 0.00 0.00 4.02
742 751 0.524862 CGGTACAGCAGTTACTCGGT 59.475 55.000 0.00 0.00 0.00 4.69
743 752 0.806868 TCGGTACAGCAGTTACTCGG 59.193 55.000 0.00 0.00 0.00 4.63
744 753 2.624316 TTCGGTACAGCAGTTACTCG 57.376 50.000 0.00 0.00 0.00 4.18
745 754 4.927425 TCATTTTCGGTACAGCAGTTACTC 59.073 41.667 0.00 0.00 0.00 2.59
746 755 4.689345 GTCATTTTCGGTACAGCAGTTACT 59.311 41.667 0.00 0.00 0.00 2.24
747 756 4.449743 TGTCATTTTCGGTACAGCAGTTAC 59.550 41.667 0.00 0.00 0.00 2.50
748 757 4.633175 TGTCATTTTCGGTACAGCAGTTA 58.367 39.130 0.00 0.00 0.00 2.24
749 758 3.472652 TGTCATTTTCGGTACAGCAGTT 58.527 40.909 0.00 0.00 0.00 3.16
750 759 3.120321 TGTCATTTTCGGTACAGCAGT 57.880 42.857 0.00 0.00 0.00 4.40
751 760 3.728864 GCATGTCATTTTCGGTACAGCAG 60.729 47.826 0.00 0.00 0.00 4.24
752 761 2.161410 GCATGTCATTTTCGGTACAGCA 59.839 45.455 0.00 0.00 0.00 4.41
753 762 2.477863 GGCATGTCATTTTCGGTACAGC 60.478 50.000 0.00 0.00 0.00 4.40
754 763 3.009723 AGGCATGTCATTTTCGGTACAG 58.990 45.455 0.00 0.00 0.00 2.74
755 764 3.006940 GAGGCATGTCATTTTCGGTACA 58.993 45.455 0.00 0.00 0.00 2.90
756 765 3.006940 TGAGGCATGTCATTTTCGGTAC 58.993 45.455 0.00 0.00 0.00 3.34
757 766 3.342377 TGAGGCATGTCATTTTCGGTA 57.658 42.857 0.00 0.00 0.00 4.02
758 767 2.198827 TGAGGCATGTCATTTTCGGT 57.801 45.000 0.00 0.00 0.00 4.69
759 768 3.074504 CATGAGGCATGTCATTTTCGG 57.925 47.619 0.00 0.00 37.12 4.30
778 787 9.817809 GGTAAAGATAAAGATACATGACTCACA 57.182 33.333 0.00 0.00 0.00 3.58
798 807 9.286170 GCCTTCTCCCTTTAATATTAGGTAAAG 57.714 37.037 4.01 3.29 37.16 1.85
799 808 9.010767 AGCCTTCTCCCTTTAATATTAGGTAAA 57.989 33.333 4.01 0.00 0.00 2.01
800 809 8.577164 AGCCTTCTCCCTTTAATATTAGGTAA 57.423 34.615 4.01 0.00 0.00 2.85
801 810 8.577164 AAGCCTTCTCCCTTTAATATTAGGTA 57.423 34.615 4.01 0.00 0.00 3.08
802 811 7.467325 AAGCCTTCTCCCTTTAATATTAGGT 57.533 36.000 4.01 0.00 0.00 3.08
803 812 7.998964 TGAAAGCCTTCTCCCTTTAATATTAGG 59.001 37.037 0.00 0.00 31.85 2.69
804 813 8.980481 TGAAAGCCTTCTCCCTTTAATATTAG 57.020 34.615 0.00 0.00 31.85 1.73
806 815 9.579932 CTATGAAAGCCTTCTCCCTTTAATATT 57.420 33.333 0.00 0.00 31.85 1.28
807 816 8.728098 ACTATGAAAGCCTTCTCCCTTTAATAT 58.272 33.333 0.00 0.00 31.85 1.28
808 817 8.102484 ACTATGAAAGCCTTCTCCCTTTAATA 57.898 34.615 0.00 0.00 31.85 0.98
809 818 6.974795 ACTATGAAAGCCTTCTCCCTTTAAT 58.025 36.000 0.00 0.00 31.85 1.40
810 819 6.388619 ACTATGAAAGCCTTCTCCCTTTAA 57.611 37.500 0.00 0.00 31.85 1.52
811 820 6.215636 AGAACTATGAAAGCCTTCTCCCTTTA 59.784 38.462 0.00 0.00 31.85 1.85
812 821 4.936685 ACTATGAAAGCCTTCTCCCTTT 57.063 40.909 0.00 0.00 34.22 3.11
813 822 4.538089 AGAACTATGAAAGCCTTCTCCCTT 59.462 41.667 0.00 0.00 32.33 3.95
814 823 4.107820 AGAACTATGAAAGCCTTCTCCCT 58.892 43.478 0.00 0.00 32.33 4.20
815 824 4.447290 GAGAACTATGAAAGCCTTCTCCC 58.553 47.826 0.00 0.00 33.92 4.30
816 825 4.447290 GGAGAACTATGAAAGCCTTCTCC 58.553 47.826 8.59 8.59 44.20 3.71
817 826 5.091261 TGGAGAACTATGAAAGCCTTCTC 57.909 43.478 0.00 0.00 36.94 2.87
818 827 5.707066 ATGGAGAACTATGAAAGCCTTCT 57.293 39.130 0.00 0.00 32.33 2.85
819 828 5.463724 CGTATGGAGAACTATGAAAGCCTTC 59.536 44.000 0.00 0.00 0.00 3.46
820 829 5.104900 ACGTATGGAGAACTATGAAAGCCTT 60.105 40.000 0.00 0.00 0.00 4.35
821 830 4.406003 ACGTATGGAGAACTATGAAAGCCT 59.594 41.667 0.00 0.00 0.00 4.58
822 831 4.694339 ACGTATGGAGAACTATGAAAGCC 58.306 43.478 0.00 0.00 0.00 4.35
823 832 5.232414 GTGACGTATGGAGAACTATGAAAGC 59.768 44.000 0.00 0.00 0.00 3.51
824 833 5.749109 GGTGACGTATGGAGAACTATGAAAG 59.251 44.000 0.00 0.00 0.00 2.62
825 834 5.421056 AGGTGACGTATGGAGAACTATGAAA 59.579 40.000 0.00 0.00 0.00 2.69
826 835 4.954202 AGGTGACGTATGGAGAACTATGAA 59.046 41.667 0.00 0.00 0.00 2.57
827 836 4.533815 AGGTGACGTATGGAGAACTATGA 58.466 43.478 0.00 0.00 0.00 2.15
828 837 4.580995 AGAGGTGACGTATGGAGAACTATG 59.419 45.833 0.00 0.00 0.00 2.23
829 838 4.794334 AGAGGTGACGTATGGAGAACTAT 58.206 43.478 0.00 0.00 0.00 2.12
830 839 4.232188 AGAGGTGACGTATGGAGAACTA 57.768 45.455 0.00 0.00 0.00 2.24
831 840 3.088789 AGAGGTGACGTATGGAGAACT 57.911 47.619 0.00 0.00 0.00 3.01
832 841 3.870633 AAGAGGTGACGTATGGAGAAC 57.129 47.619 0.00 0.00 0.00 3.01
833 842 7.039923 GGATATAAAGAGGTGACGTATGGAGAA 60.040 40.741 0.00 0.00 0.00 2.87
834 843 6.433404 GGATATAAAGAGGTGACGTATGGAGA 59.567 42.308 0.00 0.00 0.00 3.71
835 844 6.622549 GGATATAAAGAGGTGACGTATGGAG 58.377 44.000 0.00 0.00 0.00 3.86
836 845 5.182570 CGGATATAAAGAGGTGACGTATGGA 59.817 44.000 0.00 0.00 0.00 3.41
837 846 5.048224 ACGGATATAAAGAGGTGACGTATGG 60.048 44.000 0.00 0.00 0.00 2.74
838 847 6.010294 ACGGATATAAAGAGGTGACGTATG 57.990 41.667 0.00 0.00 0.00 2.39
839 848 6.645790 AACGGATATAAAGAGGTGACGTAT 57.354 37.500 0.00 0.00 0.00 3.06
840 849 7.566760 TTAACGGATATAAAGAGGTGACGTA 57.433 36.000 0.00 0.00 0.00 3.57
841 850 4.996788 AACGGATATAAAGAGGTGACGT 57.003 40.909 0.00 0.00 0.00 4.34
842 851 7.941795 AATTAACGGATATAAAGAGGTGACG 57.058 36.000 0.00 0.00 0.00 4.35
843 852 9.931210 CAAAATTAACGGATATAAAGAGGTGAC 57.069 33.333 0.00 0.00 0.00 3.67
844 853 9.675464 ACAAAATTAACGGATATAAAGAGGTGA 57.325 29.630 0.00 0.00 0.00 4.02
845 854 9.716507 CACAAAATTAACGGATATAAAGAGGTG 57.283 33.333 0.00 0.00 0.00 4.00
846 855 9.457436 ACACAAAATTAACGGATATAAAGAGGT 57.543 29.630 0.00 0.00 0.00 3.85
888 897 9.416794 CGCATATCTACTTTTAATCTCAGTCAT 57.583 33.333 0.00 0.00 0.00 3.06
889 898 8.630037 TCGCATATCTACTTTTAATCTCAGTCA 58.370 33.333 0.00 0.00 0.00 3.41
890 899 9.464714 TTCGCATATCTACTTTTAATCTCAGTC 57.535 33.333 0.00 0.00 0.00 3.51
891 900 9.817809 TTTCGCATATCTACTTTTAATCTCAGT 57.182 29.630 0.00 0.00 0.00 3.41
893 902 8.752254 CGTTTCGCATATCTACTTTTAATCTCA 58.248 33.333 0.00 0.00 0.00 3.27
894 903 8.215132 CCGTTTCGCATATCTACTTTTAATCTC 58.785 37.037 0.00 0.00 0.00 2.75
895 904 7.709613 ACCGTTTCGCATATCTACTTTTAATCT 59.290 33.333 0.00 0.00 0.00 2.40
896 905 7.848491 ACCGTTTCGCATATCTACTTTTAATC 58.152 34.615 0.00 0.00 0.00 1.75
897 906 7.781548 ACCGTTTCGCATATCTACTTTTAAT 57.218 32.000 0.00 0.00 0.00 1.40
898 907 7.599630 AACCGTTTCGCATATCTACTTTTAA 57.400 32.000 0.00 0.00 0.00 1.52
899 908 7.225523 GAACCGTTTCGCATATCTACTTTTA 57.774 36.000 0.00 0.00 0.00 1.52
900 909 6.103222 GAACCGTTTCGCATATCTACTTTT 57.897 37.500 0.00 0.00 0.00 2.27
901 910 5.713822 GAACCGTTTCGCATATCTACTTT 57.286 39.130 0.00 0.00 0.00 2.66
914 923 0.938168 ACGAGTGAGCGAACCGTTTC 60.938 55.000 0.00 0.00 34.83 2.78
915 924 0.311790 TACGAGTGAGCGAACCGTTT 59.688 50.000 11.30 0.00 35.05 3.60
916 925 0.109873 CTACGAGTGAGCGAACCGTT 60.110 55.000 11.30 0.00 35.05 4.44
917 926 1.500844 CTACGAGTGAGCGAACCGT 59.499 57.895 0.00 10.99 37.27 4.83
918 927 1.226323 CCTACGAGTGAGCGAACCG 60.226 63.158 0.00 0.00 34.83 4.44
919 928 1.139095 CCCTACGAGTGAGCGAACC 59.861 63.158 0.00 0.00 34.83 3.62
920 929 1.516603 GCCCTACGAGTGAGCGAAC 60.517 63.158 0.00 0.00 34.83 3.95
921 930 1.320344 ATGCCCTACGAGTGAGCGAA 61.320 55.000 0.00 0.00 34.83 4.70
922 931 1.753078 ATGCCCTACGAGTGAGCGA 60.753 57.895 0.00 0.00 34.83 4.93
923 932 1.589993 CATGCCCTACGAGTGAGCG 60.590 63.158 0.00 0.00 37.29 5.03
924 933 1.884926 GCATGCCCTACGAGTGAGC 60.885 63.158 6.36 0.00 0.00 4.26
925 934 0.807667 GTGCATGCCCTACGAGTGAG 60.808 60.000 16.68 0.00 0.00 3.51
926 935 1.218047 GTGCATGCCCTACGAGTGA 59.782 57.895 16.68 0.00 0.00 3.41
927 936 1.079197 TGTGCATGCCCTACGAGTG 60.079 57.895 16.68 0.00 0.00 3.51
928 937 1.079127 GTGTGCATGCCCTACGAGT 60.079 57.895 16.68 0.00 0.00 4.18
929 938 0.807667 GAGTGTGCATGCCCTACGAG 60.808 60.000 16.68 0.00 0.00 4.18
930 939 1.218047 GAGTGTGCATGCCCTACGA 59.782 57.895 16.68 0.00 0.00 3.43
931 940 1.815421 GGAGTGTGCATGCCCTACG 60.815 63.158 16.68 0.00 0.00 3.51
932 941 0.462759 GAGGAGTGTGCATGCCCTAC 60.463 60.000 16.68 11.37 0.00 3.18
933 942 1.907739 GAGGAGTGTGCATGCCCTA 59.092 57.895 16.68 0.00 0.00 3.53
934 943 2.673523 GAGGAGTGTGCATGCCCT 59.326 61.111 16.68 13.90 0.00 5.19
935 944 2.821366 CGAGGAGTGTGCATGCCC 60.821 66.667 16.68 8.64 0.00 5.36
936 945 1.672356 AACGAGGAGTGTGCATGCC 60.672 57.895 16.68 7.25 0.00 4.40
937 946 1.230635 ACAACGAGGAGTGTGCATGC 61.231 55.000 11.82 11.82 0.00 4.06
938 947 0.514255 CACAACGAGGAGTGTGCATG 59.486 55.000 0.00 0.00 0.00 4.06
939 948 1.230635 GCACAACGAGGAGTGTGCAT 61.231 55.000 20.58 0.00 46.81 3.96
940 949 1.887242 GCACAACGAGGAGTGTGCA 60.887 57.895 20.58 0.00 46.81 4.57
941 950 2.607892 GGCACAACGAGGAGTGTGC 61.608 63.158 18.05 18.05 46.84 4.57
942 951 0.946221 GAGGCACAACGAGGAGTGTG 60.946 60.000 0.00 0.00 38.02 3.82
943 952 1.367840 GAGGCACAACGAGGAGTGT 59.632 57.895 0.00 0.00 38.02 3.55
944 953 1.734477 CGAGGCACAACGAGGAGTG 60.734 63.158 0.00 0.00 38.74 3.51
945 954 2.143594 GACGAGGCACAACGAGGAGT 62.144 60.000 0.00 0.00 34.94 3.85
946 955 1.444553 GACGAGGCACAACGAGGAG 60.445 63.158 0.00 0.00 34.94 3.69
947 956 2.649034 GACGAGGCACAACGAGGA 59.351 61.111 0.00 0.00 34.94 3.71
948 957 2.432628 GGACGAGGCACAACGAGG 60.433 66.667 0.00 0.00 34.94 4.63
949 958 2.432628 GGGACGAGGCACAACGAG 60.433 66.667 0.00 0.00 34.94 4.18
962 971 2.265467 TTAGGCATTGGGAGCGGGAC 62.265 60.000 0.00 0.00 0.00 4.46
963 972 1.983119 CTTAGGCATTGGGAGCGGGA 61.983 60.000 0.00 0.00 0.00 5.14
964 973 1.526917 CTTAGGCATTGGGAGCGGG 60.527 63.158 0.00 0.00 0.00 6.13
965 974 1.097547 CACTTAGGCATTGGGAGCGG 61.098 60.000 0.00 0.00 0.00 5.52
966 975 1.097547 CCACTTAGGCATTGGGAGCG 61.098 60.000 0.00 0.00 0.00 5.03
967 976 0.034089 ACCACTTAGGCATTGGGAGC 60.034 55.000 0.00 0.00 43.14 4.70
968 977 1.408822 GGACCACTTAGGCATTGGGAG 60.409 57.143 0.00 0.00 43.14 4.30
969 978 0.623723 GGACCACTTAGGCATTGGGA 59.376 55.000 0.00 0.00 43.14 4.37
970 979 0.625849 AGGACCACTTAGGCATTGGG 59.374 55.000 0.00 0.00 43.14 4.12
971 980 2.290896 TGAAGGACCACTTAGGCATTGG 60.291 50.000 0.00 0.00 43.14 3.16
972 981 3.071874 TGAAGGACCACTTAGGCATTG 57.928 47.619 0.00 0.00 43.14 2.82
973 982 3.330701 TCTTGAAGGACCACTTAGGCATT 59.669 43.478 0.00 0.00 43.14 3.56
974 983 2.912956 TCTTGAAGGACCACTTAGGCAT 59.087 45.455 0.00 0.00 43.14 4.40
975 984 2.038557 GTCTTGAAGGACCACTTAGGCA 59.961 50.000 0.00 0.00 43.14 4.75
976 985 2.303311 AGTCTTGAAGGACCACTTAGGC 59.697 50.000 0.00 0.00 43.14 3.93
977 986 4.625607 AAGTCTTGAAGGACCACTTAGG 57.374 45.455 0.00 0.00 40.21 2.69
978 987 6.595716 CCATTAAGTCTTGAAGGACCACTTAG 59.404 42.308 0.00 0.00 40.21 2.18
979 988 6.472887 CCATTAAGTCTTGAAGGACCACTTA 58.527 40.000 0.00 0.00 40.21 2.24
980 989 5.316987 CCATTAAGTCTTGAAGGACCACTT 58.683 41.667 0.00 3.10 43.65 3.16
981 990 4.263506 CCCATTAAGTCTTGAAGGACCACT 60.264 45.833 0.41 0.00 36.95 4.00
982 991 4.010349 CCCATTAAGTCTTGAAGGACCAC 58.990 47.826 0.41 0.00 36.95 4.16
983 992 3.561313 GCCCATTAAGTCTTGAAGGACCA 60.561 47.826 0.41 0.00 36.95 4.02
984 993 3.017442 GCCCATTAAGTCTTGAAGGACC 58.983 50.000 0.41 0.00 36.95 4.46
985 994 3.017442 GGCCCATTAAGTCTTGAAGGAC 58.983 50.000 0.41 0.00 36.56 3.85
986 995 2.025321 GGGCCCATTAAGTCTTGAAGGA 60.025 50.000 19.95 0.00 0.00 3.36
987 996 2.291540 TGGGCCCATTAAGTCTTGAAGG 60.292 50.000 24.45 0.00 0.00 3.46
988 997 3.019564 CTGGGCCCATTAAGTCTTGAAG 58.980 50.000 28.82 4.37 0.00 3.02
989 998 2.883888 GCTGGGCCCATTAAGTCTTGAA 60.884 50.000 28.82 0.00 0.00 2.69
990 999 1.340991 GCTGGGCCCATTAAGTCTTGA 60.341 52.381 28.82 0.00 0.00 3.02
991 1000 1.106285 GCTGGGCCCATTAAGTCTTG 58.894 55.000 28.82 11.64 0.00 3.02
992 1001 1.002857 AGCTGGGCCCATTAAGTCTT 58.997 50.000 28.82 1.57 0.00 3.01
993 1002 1.893315 TAGCTGGGCCCATTAAGTCT 58.107 50.000 28.82 16.43 0.00 3.24
994 1003 2.959465 ATAGCTGGGCCCATTAAGTC 57.041 50.000 28.82 9.85 0.00 3.01
995 1004 3.566351 GAAATAGCTGGGCCCATTAAGT 58.434 45.455 28.82 9.94 0.00 2.24
996 1005 2.554032 CGAAATAGCTGGGCCCATTAAG 59.446 50.000 28.82 15.51 0.00 1.85
997 1006 2.092103 ACGAAATAGCTGGGCCCATTAA 60.092 45.455 28.82 14.14 0.00 1.40
998 1007 1.493022 ACGAAATAGCTGGGCCCATTA 59.507 47.619 28.82 21.22 0.00 1.90
999 1008 0.258774 ACGAAATAGCTGGGCCCATT 59.741 50.000 28.82 17.26 0.00 3.16
1000 1009 0.179018 GACGAAATAGCTGGGCCCAT 60.179 55.000 28.82 15.16 0.00 4.00
1001 1010 1.223487 GACGAAATAGCTGGGCCCA 59.777 57.895 26.67 26.67 0.00 5.36
1002 1011 1.526225 GGACGAAATAGCTGGGCCC 60.526 63.158 17.59 17.59 0.00 5.80
1003 1012 1.887707 CGGACGAAATAGCTGGGCC 60.888 63.158 0.00 0.00 0.00 5.80
1004 1013 2.534903 GCGGACGAAATAGCTGGGC 61.535 63.158 0.00 0.00 0.00 5.36
1005 1014 1.887707 GGCGGACGAAATAGCTGGG 60.888 63.158 0.00 0.00 0.00 4.45
1006 1015 0.742990 TTGGCGGACGAAATAGCTGG 60.743 55.000 0.00 0.00 0.00 4.85
1007 1016 1.003545 CATTGGCGGACGAAATAGCTG 60.004 52.381 0.00 0.00 0.00 4.24
1008 1017 1.299541 CATTGGCGGACGAAATAGCT 58.700 50.000 0.00 0.00 0.00 3.32
1009 1018 0.317020 GCATTGGCGGACGAAATAGC 60.317 55.000 0.00 0.00 0.00 2.97
1010 1019 3.825812 GCATTGGCGGACGAAATAG 57.174 52.632 0.00 0.00 0.00 1.73
1021 1030 3.512516 GGCAGGAGACGCATTGGC 61.513 66.667 0.00 0.00 0.00 4.52
1022 1031 2.046023 TGGCAGGAGACGCATTGG 60.046 61.111 0.00 0.00 0.00 3.16
1023 1032 2.758089 GCTGGCAGGAGACGCATTG 61.758 63.158 17.64 0.00 0.00 2.82
1024 1033 2.437359 GCTGGCAGGAGACGCATT 60.437 61.111 17.64 0.00 0.00 3.56
1025 1034 4.827087 CGCTGGCAGGAGACGCAT 62.827 66.667 17.64 0.00 0.00 4.73
1036 1045 2.789917 CAAGAGACATGCGCTGGC 59.210 61.111 9.73 6.79 40.52 4.85
1037 1046 2.758089 GGCAAGAGACATGCGCTGG 61.758 63.158 9.73 2.61 44.75 4.85
1038 1047 2.789917 GGCAAGAGACATGCGCTG 59.210 61.111 9.73 7.16 44.75 5.18
1039 1048 2.584261 ATCGGCAAGAGACATGCGCT 62.584 55.000 9.73 0.00 44.75 5.92
1040 1049 1.709147 AATCGGCAAGAGACATGCGC 61.709 55.000 0.00 0.00 44.75 6.09
1041 1050 0.729116 AAATCGGCAAGAGACATGCG 59.271 50.000 0.00 0.00 44.75 4.73
1042 1051 2.927553 AAAATCGGCAAGAGACATGC 57.072 45.000 0.00 0.00 43.08 4.06
1060 1069 3.930229 AGATATGTGCGTGCGTCTAAAAA 59.070 39.130 0.00 0.00 0.00 1.94
1061 1070 3.517602 AGATATGTGCGTGCGTCTAAAA 58.482 40.909 0.00 0.00 0.00 1.52
1062 1071 3.159353 AGATATGTGCGTGCGTCTAAA 57.841 42.857 0.00 0.00 0.00 1.85
1063 1072 2.863401 AGATATGTGCGTGCGTCTAA 57.137 45.000 0.00 0.00 0.00 2.10
1064 1073 2.876550 AGTAGATATGTGCGTGCGTCTA 59.123 45.455 0.00 0.00 0.00 2.59
1065 1074 1.676529 AGTAGATATGTGCGTGCGTCT 59.323 47.619 0.00 0.00 0.00 4.18
1066 1075 2.121116 AGTAGATATGTGCGTGCGTC 57.879 50.000 0.00 0.00 0.00 5.19
1067 1076 2.460918 GAAGTAGATATGTGCGTGCGT 58.539 47.619 0.00 0.00 0.00 5.24
1068 1077 1.787155 GGAAGTAGATATGTGCGTGCG 59.213 52.381 0.00 0.00 0.00 5.34
1069 1078 3.053455 GAGGAAGTAGATATGTGCGTGC 58.947 50.000 0.00 0.00 0.00 5.34
1070 1079 3.300857 CGAGGAAGTAGATATGTGCGTG 58.699 50.000 0.00 0.00 0.00 5.34
1071 1080 2.293677 CCGAGGAAGTAGATATGTGCGT 59.706 50.000 0.00 0.00 0.00 5.24
1072 1081 2.293677 ACCGAGGAAGTAGATATGTGCG 59.706 50.000 0.00 0.00 0.00 5.34
1073 1082 5.646577 ATACCGAGGAAGTAGATATGTGC 57.353 43.478 0.00 0.00 0.00 4.57
1074 1083 9.790389 GAAATATACCGAGGAAGTAGATATGTG 57.210 37.037 0.00 0.00 0.00 3.21
1075 1084 8.968969 GGAAATATACCGAGGAAGTAGATATGT 58.031 37.037 0.00 0.00 0.00 2.29
1076 1085 8.414778 GGGAAATATACCGAGGAAGTAGATATG 58.585 40.741 0.00 0.00 0.00 1.78
1077 1086 8.120538 TGGGAAATATACCGAGGAAGTAGATAT 58.879 37.037 0.00 0.00 0.00 1.63
1078 1087 7.395489 GTGGGAAATATACCGAGGAAGTAGATA 59.605 40.741 0.00 0.00 0.00 1.98
1079 1088 6.210984 GTGGGAAATATACCGAGGAAGTAGAT 59.789 42.308 0.00 0.00 0.00 1.98
1080 1089 5.537674 GTGGGAAATATACCGAGGAAGTAGA 59.462 44.000 0.00 0.00 0.00 2.59
1081 1090 5.564259 CGTGGGAAATATACCGAGGAAGTAG 60.564 48.000 0.00 0.00 0.00 2.57
1082 1091 4.279169 CGTGGGAAATATACCGAGGAAGTA 59.721 45.833 0.00 0.00 0.00 2.24
1083 1092 3.069158 CGTGGGAAATATACCGAGGAAGT 59.931 47.826 0.00 0.00 0.00 3.01
1084 1093 3.319972 TCGTGGGAAATATACCGAGGAAG 59.680 47.826 0.00 0.00 29.98 3.46
1085 1094 3.068590 GTCGTGGGAAATATACCGAGGAA 59.931 47.826 0.00 0.00 33.46 3.36
1086 1095 2.624838 GTCGTGGGAAATATACCGAGGA 59.375 50.000 0.00 0.00 0.00 3.71
1087 1096 2.363038 TGTCGTGGGAAATATACCGAGG 59.637 50.000 0.00 0.00 0.00 4.63
1088 1097 3.720949 TGTCGTGGGAAATATACCGAG 57.279 47.619 0.00 0.00 0.00 4.63
1089 1098 3.385433 ACATGTCGTGGGAAATATACCGA 59.615 43.478 0.00 0.00 0.00 4.69
1090 1099 3.724374 ACATGTCGTGGGAAATATACCG 58.276 45.455 0.00 0.00 0.00 4.02
1091 1100 4.274950 CCAACATGTCGTGGGAAATATACC 59.725 45.833 8.49 0.00 42.09 2.73
1092 1101 5.120399 TCCAACATGTCGTGGGAAATATAC 58.880 41.667 15.13 0.00 45.52 1.47
1234 1252 6.672593 TGAAAATGATAGGGATGGTTAGCTT 58.327 36.000 0.00 0.00 0.00 3.74
1717 4023 3.625764 GCGATCCTGGCATTTGTTTAGTA 59.374 43.478 0.00 0.00 0.00 1.82
1719 4025 2.684881 AGCGATCCTGGCATTTGTTTAG 59.315 45.455 0.00 0.00 0.00 1.85
1812 4151 0.664166 GTGTTGGTTTGGCATGAGCG 60.664 55.000 0.00 0.00 43.41 5.03
1868 4207 1.827969 CAACTCCCTGGAGACGAGAAT 59.172 52.381 19.85 0.00 44.53 2.40
1923 4264 1.219393 CCTTTCCCTGACGCTCCTC 59.781 63.158 0.00 0.00 0.00 3.71
2124 4470 3.478857 TGCTTGTTTCTCCTTTCCGTA 57.521 42.857 0.00 0.00 0.00 4.02
2154 4503 1.199624 GCAAAAACGCACAAGAGTGG 58.800 50.000 0.00 0.00 45.98 4.00
2488 4881 2.100418 TCTGAGATCGGAGCAGAACATG 59.900 50.000 0.00 0.00 35.87 3.21
2633 5026 4.560427 GCAGAATTCCTTTTTGAGAATCGC 59.440 41.667 0.65 0.00 38.61 4.58
2667 5060 2.040412 ACAACTCAGGACCAGGATTTCC 59.960 50.000 0.00 0.00 0.00 3.13
2669 5062 2.443255 ACACAACTCAGGACCAGGATTT 59.557 45.455 0.00 0.00 0.00 2.17
2768 5161 1.444119 TTGCCTTGGTTGACAGCGAC 61.444 55.000 0.00 0.00 0.00 5.19
2798 5191 4.908736 AGTTATCATGTGCAAATACGTGC 58.091 39.130 0.00 0.00 45.15 5.34
2810 5203 6.191657 TCCCATATGAGCAAGTTATCATGT 57.808 37.500 3.65 4.12 36.81 3.21
2925 5323 7.665559 AGCCACAAGTAAGATATTTGAACTGAA 59.334 33.333 0.43 0.00 0.00 3.02
2945 5343 3.657398 AATCTCATGATGGAAGCCACA 57.343 42.857 0.00 0.00 35.80 4.17
3034 5435 3.393800 CTGCCTATTCCATAGAACCACG 58.606 50.000 0.00 0.00 33.97 4.94
3073 5474 1.711060 CGTTTGACCAGTGTGCGGTT 61.711 55.000 0.00 0.00 36.69 4.44
3261 5663 1.809271 CGCCACTGATGCAGATAGCTT 60.809 52.381 0.00 0.00 45.94 3.74
3366 5838 2.274542 TCTATCCTCCCTTGCAAACCA 58.725 47.619 0.00 0.00 0.00 3.67
3378 5851 5.824624 CCTCATCTCAGCTCTATCTATCCTC 59.175 48.000 0.00 0.00 0.00 3.71
3431 5909 7.611213 ACTATTGCAGCTTATTTCTAACGTT 57.389 32.000 5.88 5.88 0.00 3.99
3480 6037 3.551485 GCAAACTTCAGAAACAAACGCAT 59.449 39.130 0.00 0.00 0.00 4.73
3557 6119 1.821216 TTCAGGGCGAAACCTCAATC 58.179 50.000 0.00 0.00 39.34 2.67
3569 6258 2.232208 CTGAACCCAAGAATTTCAGGGC 59.768 50.000 20.71 10.45 45.45 5.19
3677 6372 7.864686 GCTTTTGTTGAATTAAAGCTCCAAAT 58.135 30.769 13.11 0.00 46.27 2.32
3724 6426 1.355381 TCGTTCCTACTCTGTACCCCA 59.645 52.381 0.00 0.00 0.00 4.96
3725 6427 2.134789 TCGTTCCTACTCTGTACCCC 57.865 55.000 0.00 0.00 0.00 4.95
3730 6432 3.938289 GAACCTTCGTTCCTACTCTGT 57.062 47.619 0.00 0.00 42.26 3.41
3943 6649 0.526211 GCATTCCCCTTCAACGGAAC 59.474 55.000 0.00 0.00 40.88 3.62
3948 6654 3.751479 AAAACAGCATTCCCCTTCAAC 57.249 42.857 0.00 0.00 0.00 3.18
3956 6662 8.413899 TGTTGTTAAACTAAAAACAGCATTCC 57.586 30.769 1.37 0.00 40.09 3.01
3997 6704 5.232414 GTCATTTCGTATCCAGTACAGCTTC 59.768 44.000 0.00 0.00 32.61 3.86
4013 6720 8.511465 AGAAAAATCATTTGTGAGTCATTTCG 57.489 30.769 0.00 0.00 0.00 3.46
4062 6769 4.389687 TGCACTGTGCTATATATGAATGCG 59.610 41.667 30.43 0.00 45.31 4.73
4107 6814 6.762702 ACAACTGATCATCATTATGTGCAA 57.237 33.333 0.00 0.00 34.50 4.08
4147 6854 2.876368 ATCGCTTGGGCTAGGCACAC 62.876 60.000 19.14 1.07 43.74 3.82
4198 6918 2.363788 TGTGTGTTGATCTAGGCGAC 57.636 50.000 0.00 0.00 0.00 5.19
4212 6932 5.348986 ACTATAGGCACGAAGTTATGTGTG 58.651 41.667 4.43 2.25 41.61 3.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.