Multiple sequence alignment - TraesCS1A01G096900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G096900 chr1A 100.000 3307 0 0 1 3307 93053358 93050052 0.000000e+00 6107
1 TraesCS1A01G096900 chr4D 92.286 2865 185 24 469 3307 8437678 8434824 0.000000e+00 4034
2 TraesCS1A01G096900 chr4D 90.685 2877 208 30 455 3307 103551501 103554341 0.000000e+00 3773
3 TraesCS1A01G096900 chr4D 88.056 2495 194 53 849 3307 364996607 364999033 0.000000e+00 2861
4 TraesCS1A01G096900 chr4D 94.243 469 22 3 1 464 437602167 437602635 0.000000e+00 712
5 TraesCS1A01G096900 chr3B 90.128 2806 224 30 463 3243 559345529 559348306 0.000000e+00 3598
6 TraesCS1A01G096900 chr3B 84.935 770 81 21 1766 2512 83107239 83107996 0.000000e+00 747
7 TraesCS1A01G096900 chr3B 84.000 225 28 8 464 683 669402050 669401829 3.340000e-50 209
8 TraesCS1A01G096900 chr3A 91.811 2418 172 15 588 2984 557916537 557914125 0.000000e+00 3345
9 TraesCS1A01G096900 chr6A 89.011 2630 213 46 703 3304 304292109 304294690 0.000000e+00 3186
10 TraesCS1A01G096900 chr6A 90.520 1751 141 19 1572 3307 364206972 364208712 0.000000e+00 2290
11 TraesCS1A01G096900 chr6A 86.738 1116 128 13 469 1576 364205272 364206375 0.000000e+00 1223
12 TraesCS1A01G096900 chr7D 92.599 1824 105 20 1500 3307 217694658 217696467 0.000000e+00 2593
13 TraesCS1A01G096900 chr7D 90.674 1855 148 10 465 2302 629773051 629771205 0.000000e+00 2444
14 TraesCS1A01G096900 chr7D 87.984 1498 132 19 651 2111 453308429 453309915 0.000000e+00 1725
15 TraesCS1A01G096900 chr7D 94.243 469 26 1 1 468 146531005 146530537 0.000000e+00 715
16 TraesCS1A01G096900 chr7D 84.284 649 61 23 1895 2512 204135617 204136255 2.200000e-166 595
17 TraesCS1A01G096900 chr3D 92.413 1819 106 16 1505 3307 59190667 59192469 0.000000e+00 2566
18 TraesCS1A01G096900 chr3D 90.927 1565 112 16 463 2017 427821525 427823069 0.000000e+00 2076
19 TraesCS1A01G096900 chr3D 94.456 469 23 2 1 468 402551313 402551779 0.000000e+00 719
20 TraesCS1A01G096900 chr3D 93.817 469 28 1 1 468 324931184 324931652 0.000000e+00 704
21 TraesCS1A01G096900 chr4B 87.240 1873 199 15 477 2319 529152032 529150170 0.000000e+00 2098
22 TraesCS1A01G096900 chr4B 91.425 828 59 11 2486 3307 363367629 363368450 0.000000e+00 1125
23 TraesCS1A01G096900 chr7B 90.945 1535 99 21 1801 3307 564603259 564604781 0.000000e+00 2028
24 TraesCS1A01G096900 chr7B 85.975 1262 131 17 463 1717 564602043 564603265 0.000000e+00 1308
25 TraesCS1A01G096900 chr6D 94.030 469 23 3 1 464 75629866 75630334 0.000000e+00 706
26 TraesCS1A01G096900 chr6D 94.030 469 23 3 1 464 307212899 307212431 0.000000e+00 706
27 TraesCS1A01G096900 chr2D 93.817 469 28 1 1 468 312767173 312767641 0.000000e+00 704
28 TraesCS1A01G096900 chr2D 93.603 469 29 1 1 468 496014331 496014799 0.000000e+00 699
29 TraesCS1A01G096900 chr2D 84.203 728 65 28 1819 2512 370303492 370304203 0.000000e+00 662
30 TraesCS1A01G096900 chr1D 93.978 465 27 1 1 464 338135269 338135733 0.000000e+00 702


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G096900 chr1A 93050052 93053358 3306 True 6107.0 6107 100.000 1 3307 1 chr1A.!!$R1 3306
1 TraesCS1A01G096900 chr4D 8434824 8437678 2854 True 4034.0 4034 92.286 469 3307 1 chr4D.!!$R1 2838
2 TraesCS1A01G096900 chr4D 103551501 103554341 2840 False 3773.0 3773 90.685 455 3307 1 chr4D.!!$F1 2852
3 TraesCS1A01G096900 chr4D 364996607 364999033 2426 False 2861.0 2861 88.056 849 3307 1 chr4D.!!$F2 2458
4 TraesCS1A01G096900 chr3B 559345529 559348306 2777 False 3598.0 3598 90.128 463 3243 1 chr3B.!!$F2 2780
5 TraesCS1A01G096900 chr3B 83107239 83107996 757 False 747.0 747 84.935 1766 2512 1 chr3B.!!$F1 746
6 TraesCS1A01G096900 chr3A 557914125 557916537 2412 True 3345.0 3345 91.811 588 2984 1 chr3A.!!$R1 2396
7 TraesCS1A01G096900 chr6A 304292109 304294690 2581 False 3186.0 3186 89.011 703 3304 1 chr6A.!!$F1 2601
8 TraesCS1A01G096900 chr6A 364205272 364208712 3440 False 1756.5 2290 88.629 469 3307 2 chr6A.!!$F2 2838
9 TraesCS1A01G096900 chr7D 217694658 217696467 1809 False 2593.0 2593 92.599 1500 3307 1 chr7D.!!$F2 1807
10 TraesCS1A01G096900 chr7D 629771205 629773051 1846 True 2444.0 2444 90.674 465 2302 1 chr7D.!!$R2 1837
11 TraesCS1A01G096900 chr7D 453308429 453309915 1486 False 1725.0 1725 87.984 651 2111 1 chr7D.!!$F3 1460
12 TraesCS1A01G096900 chr7D 204135617 204136255 638 False 595.0 595 84.284 1895 2512 1 chr7D.!!$F1 617
13 TraesCS1A01G096900 chr3D 59190667 59192469 1802 False 2566.0 2566 92.413 1505 3307 1 chr3D.!!$F1 1802
14 TraesCS1A01G096900 chr3D 427821525 427823069 1544 False 2076.0 2076 90.927 463 2017 1 chr3D.!!$F4 1554
15 TraesCS1A01G096900 chr4B 529150170 529152032 1862 True 2098.0 2098 87.240 477 2319 1 chr4B.!!$R1 1842
16 TraesCS1A01G096900 chr4B 363367629 363368450 821 False 1125.0 1125 91.425 2486 3307 1 chr4B.!!$F1 821
17 TraesCS1A01G096900 chr7B 564602043 564604781 2738 False 1668.0 2028 88.460 463 3307 2 chr7B.!!$F1 2844
18 TraesCS1A01G096900 chr2D 370303492 370304203 711 False 662.0 662 84.203 1819 2512 1 chr2D.!!$F2 693

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
24 25 0.107831 ACCGGTTGTAGCAGCAAAGA 59.892 50.0 0.00 0.0 0.00 2.52 F
135 136 0.179020 AGCAACCTGTTGTAGCAGCA 60.179 50.0 11.35 0.0 42.31 4.41 F
305 306 0.389426 CTGCTGTGCAATTGGGCTTC 60.389 55.0 7.72 0.0 38.41 3.86 F
569 576 0.918983 TTGCCCGAATCCCTCAGAAT 59.081 50.0 0.00 0.0 0.00 2.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1594 2258 0.958091 TCAAAACCCCAATCTGCGTG 59.042 50.000 0.00 0.00 0.00 5.34 R
1716 2380 2.064434 TTCCATTGTCCTGCACACAA 57.936 45.000 8.56 8.56 38.12 3.33 R
2284 2975 1.192146 CCGGGGAGTCAGGACTTTCA 61.192 60.000 3.07 0.00 42.66 2.69 R
2331 3047 3.925913 CACAAAGTTCACCAAACAACCAG 59.074 43.478 0.00 0.00 40.56 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.515081 TTGTAACCGGTTGTAGCAGC 58.485 50.000 30.08 10.78 0.00 5.25
21 22 1.202663 TGTAACCGGTTGTAGCAGCAA 60.203 47.619 30.08 2.96 0.00 3.91
22 23 1.874872 GTAACCGGTTGTAGCAGCAAA 59.125 47.619 30.08 2.12 0.00 3.68
23 24 0.951558 AACCGGTTGTAGCAGCAAAG 59.048 50.000 21.56 0.00 0.00 2.77
24 25 0.107831 ACCGGTTGTAGCAGCAAAGA 59.892 50.000 0.00 0.00 0.00 2.52
25 26 1.234821 CCGGTTGTAGCAGCAAAGAA 58.765 50.000 0.00 0.00 0.00 2.52
26 27 1.197721 CCGGTTGTAGCAGCAAAGAAG 59.802 52.381 0.00 0.00 0.00 2.85
27 28 1.873591 CGGTTGTAGCAGCAAAGAAGT 59.126 47.619 0.00 0.00 0.00 3.01
28 29 2.290641 CGGTTGTAGCAGCAAAGAAGTT 59.709 45.455 0.00 0.00 0.00 2.66
29 30 3.496884 CGGTTGTAGCAGCAAAGAAGTTA 59.503 43.478 0.00 0.00 0.00 2.24
30 31 4.610680 CGGTTGTAGCAGCAAAGAAGTTAC 60.611 45.833 0.00 0.00 0.00 2.50
31 32 4.320275 GGTTGTAGCAGCAAAGAAGTTACC 60.320 45.833 0.00 0.00 0.00 2.85
32 33 4.079980 TGTAGCAGCAAAGAAGTTACCA 57.920 40.909 0.00 0.00 0.00 3.25
33 34 4.456535 TGTAGCAGCAAAGAAGTTACCAA 58.543 39.130 0.00 0.00 0.00 3.67
34 35 4.884744 TGTAGCAGCAAAGAAGTTACCAAA 59.115 37.500 0.00 0.00 0.00 3.28
35 36 5.358442 TGTAGCAGCAAAGAAGTTACCAAAA 59.642 36.000 0.00 0.00 0.00 2.44
36 37 5.337578 AGCAGCAAAGAAGTTACCAAAAA 57.662 34.783 0.00 0.00 0.00 1.94
56 57 6.735678 AAAAAGTTTTGCAAAAGGTACCTG 57.264 33.333 24.46 5.08 0.00 4.00
57 58 5.414789 AAAGTTTTGCAAAAGGTACCTGT 57.585 34.783 24.46 7.09 0.00 4.00
58 59 5.414789 AAGTTTTGCAAAAGGTACCTGTT 57.585 34.783 24.46 14.37 0.00 3.16
59 60 4.754322 AGTTTTGCAAAAGGTACCTGTTG 58.246 39.130 32.72 32.72 42.56 3.33
60 61 4.221924 AGTTTTGCAAAAGGTACCTGTTGT 59.778 37.500 35.08 18.68 41.90 3.32
61 62 3.791973 TTGCAAAAGGTACCTGTTGTG 57.208 42.857 35.08 19.88 41.90 3.33
62 63 2.028130 TGCAAAAGGTACCTGTTGTGG 58.972 47.619 35.08 18.33 41.90 4.17
63 64 1.269569 GCAAAAGGTACCTGTTGTGGC 60.270 52.381 35.08 23.08 41.90 5.01
64 65 2.028130 CAAAAGGTACCTGTTGTGGCA 58.972 47.619 29.92 0.00 36.72 4.92
65 66 2.627699 CAAAAGGTACCTGTTGTGGCAT 59.372 45.455 29.92 3.97 36.72 4.40
66 67 2.675658 AAGGTACCTGTTGTGGCATT 57.324 45.000 17.14 0.00 0.00 3.56
67 68 1.909700 AGGTACCTGTTGTGGCATTG 58.090 50.000 15.42 0.00 0.00 2.82
68 69 0.887933 GGTACCTGTTGTGGCATTGG 59.112 55.000 4.06 0.00 0.00 3.16
69 70 1.546773 GGTACCTGTTGTGGCATTGGA 60.547 52.381 4.06 0.00 0.00 3.53
70 71 1.812571 GTACCTGTTGTGGCATTGGAG 59.187 52.381 0.00 0.00 0.00 3.86
71 72 0.185901 ACCTGTTGTGGCATTGGAGT 59.814 50.000 0.00 0.00 0.00 3.85
72 73 1.331214 CCTGTTGTGGCATTGGAGTT 58.669 50.000 0.00 0.00 0.00 3.01
73 74 1.688197 CCTGTTGTGGCATTGGAGTTT 59.312 47.619 0.00 0.00 0.00 2.66
74 75 2.288395 CCTGTTGTGGCATTGGAGTTTC 60.288 50.000 0.00 0.00 0.00 2.78
75 76 2.624838 CTGTTGTGGCATTGGAGTTTCT 59.375 45.455 0.00 0.00 0.00 2.52
76 77 2.622942 TGTTGTGGCATTGGAGTTTCTC 59.377 45.455 0.00 0.00 0.00 2.87
77 78 2.887152 GTTGTGGCATTGGAGTTTCTCT 59.113 45.455 0.00 0.00 0.00 3.10
78 79 3.228188 TGTGGCATTGGAGTTTCTCTT 57.772 42.857 0.00 0.00 0.00 2.85
79 80 2.886523 TGTGGCATTGGAGTTTCTCTTG 59.113 45.455 0.00 0.00 0.00 3.02
80 81 2.229784 GTGGCATTGGAGTTTCTCTTGG 59.770 50.000 0.00 0.00 0.00 3.61
81 82 2.108075 TGGCATTGGAGTTTCTCTTGGA 59.892 45.455 0.00 0.00 0.00 3.53
82 83 3.245371 TGGCATTGGAGTTTCTCTTGGAT 60.245 43.478 0.00 0.00 0.00 3.41
83 84 3.379688 GGCATTGGAGTTTCTCTTGGATC 59.620 47.826 0.00 0.00 0.00 3.36
84 85 3.379688 GCATTGGAGTTTCTCTTGGATCC 59.620 47.826 4.20 4.20 0.00 3.36
85 86 4.853007 CATTGGAGTTTCTCTTGGATCCT 58.147 43.478 14.23 0.00 0.00 3.24
86 87 3.988976 TGGAGTTTCTCTTGGATCCTG 57.011 47.619 14.23 6.15 0.00 3.86
87 88 3.520696 TGGAGTTTCTCTTGGATCCTGA 58.479 45.455 14.23 10.31 0.00 3.86
88 89 3.909995 TGGAGTTTCTCTTGGATCCTGAA 59.090 43.478 14.23 9.28 0.00 3.02
89 90 4.350816 TGGAGTTTCTCTTGGATCCTGAAA 59.649 41.667 14.23 14.24 0.00 2.69
90 91 5.163099 TGGAGTTTCTCTTGGATCCTGAAAA 60.163 40.000 14.23 10.89 0.00 2.29
91 92 5.414144 GGAGTTTCTCTTGGATCCTGAAAAG 59.586 44.000 14.23 8.25 0.00 2.27
92 93 5.946486 AGTTTCTCTTGGATCCTGAAAAGT 58.054 37.500 14.23 12.69 0.00 2.66
93 94 6.368805 AGTTTCTCTTGGATCCTGAAAAGTT 58.631 36.000 14.23 5.60 0.00 2.66
94 95 6.264067 AGTTTCTCTTGGATCCTGAAAAGTTG 59.736 38.462 14.23 6.23 0.00 3.16
95 96 5.567037 TCTCTTGGATCCTGAAAAGTTGA 57.433 39.130 14.23 8.22 0.00 3.18
96 97 5.555017 TCTCTTGGATCCTGAAAAGTTGAG 58.445 41.667 14.23 2.94 0.00 3.02
97 98 5.072329 TCTCTTGGATCCTGAAAAGTTGAGT 59.928 40.000 14.23 0.00 0.00 3.41
98 99 6.270000 TCTCTTGGATCCTGAAAAGTTGAGTA 59.730 38.462 14.23 0.00 0.00 2.59
99 100 7.020827 TCTTGGATCCTGAAAAGTTGAGTAT 57.979 36.000 14.23 0.00 0.00 2.12
100 101 7.106239 TCTTGGATCCTGAAAAGTTGAGTATC 58.894 38.462 14.23 0.00 0.00 2.24
101 102 5.745227 TGGATCCTGAAAAGTTGAGTATCC 58.255 41.667 14.23 0.00 0.00 2.59
102 103 5.250543 TGGATCCTGAAAAGTTGAGTATCCA 59.749 40.000 14.23 0.00 38.36 3.41
103 104 5.819901 GGATCCTGAAAAGTTGAGTATCCAG 59.180 44.000 3.84 0.00 32.42 3.86
104 105 5.825593 TCCTGAAAAGTTGAGTATCCAGT 57.174 39.130 0.00 0.00 0.00 4.00
105 106 6.928348 TCCTGAAAAGTTGAGTATCCAGTA 57.072 37.500 0.00 0.00 0.00 2.74
106 107 7.311092 TCCTGAAAAGTTGAGTATCCAGTAA 57.689 36.000 0.00 0.00 0.00 2.24
107 108 7.159372 TCCTGAAAAGTTGAGTATCCAGTAAC 58.841 38.462 0.00 0.00 0.00 2.50
108 109 6.934645 CCTGAAAAGTTGAGTATCCAGTAACA 59.065 38.462 0.00 0.00 0.00 2.41
109 110 7.607991 CCTGAAAAGTTGAGTATCCAGTAACAT 59.392 37.037 0.00 0.00 0.00 2.71
110 111 8.322906 TGAAAAGTTGAGTATCCAGTAACATG 57.677 34.615 0.00 0.00 0.00 3.21
111 112 8.154203 TGAAAAGTTGAGTATCCAGTAACATGA 58.846 33.333 0.00 0.00 0.00 3.07
112 113 9.167311 GAAAAGTTGAGTATCCAGTAACATGAT 57.833 33.333 0.00 0.00 0.00 2.45
113 114 9.520515 AAAAGTTGAGTATCCAGTAACATGATT 57.479 29.630 0.00 0.00 0.00 2.57
115 116 9.823647 AAGTTGAGTATCCAGTAACATGATTAG 57.176 33.333 0.00 0.00 0.00 1.73
116 117 9.201989 AGTTGAGTATCCAGTAACATGATTAGA 57.798 33.333 0.00 0.00 0.00 2.10
117 118 9.469807 GTTGAGTATCCAGTAACATGATTAGAG 57.530 37.037 0.00 0.00 0.00 2.43
118 119 7.661968 TGAGTATCCAGTAACATGATTAGAGC 58.338 38.462 0.00 0.00 0.00 4.09
119 120 7.287696 TGAGTATCCAGTAACATGATTAGAGCA 59.712 37.037 0.00 0.00 0.00 4.26
120 121 8.023021 AGTATCCAGTAACATGATTAGAGCAA 57.977 34.615 0.00 0.00 0.00 3.91
121 122 7.928706 AGTATCCAGTAACATGATTAGAGCAAC 59.071 37.037 0.00 0.00 0.00 4.17
122 123 5.428253 TCCAGTAACATGATTAGAGCAACC 58.572 41.667 0.00 0.00 0.00 3.77
123 124 5.189736 TCCAGTAACATGATTAGAGCAACCT 59.810 40.000 0.00 0.00 0.00 3.50
124 125 5.295292 CCAGTAACATGATTAGAGCAACCTG 59.705 44.000 0.00 0.00 0.00 4.00
125 126 5.877012 CAGTAACATGATTAGAGCAACCTGT 59.123 40.000 0.00 0.00 0.00 4.00
126 127 6.372659 CAGTAACATGATTAGAGCAACCTGTT 59.627 38.462 0.00 0.00 0.00 3.16
127 128 5.633830 AACATGATTAGAGCAACCTGTTG 57.366 39.130 0.00 5.66 43.14 3.33
128 129 4.655963 ACATGATTAGAGCAACCTGTTGT 58.344 39.130 11.35 0.00 42.31 3.32
129 130 5.804639 ACATGATTAGAGCAACCTGTTGTA 58.195 37.500 11.35 0.00 42.31 2.41
130 131 5.877012 ACATGATTAGAGCAACCTGTTGTAG 59.123 40.000 11.35 0.00 42.31 2.74
131 132 4.253685 TGATTAGAGCAACCTGTTGTAGC 58.746 43.478 11.35 0.00 42.31 3.58
132 133 3.762407 TTAGAGCAACCTGTTGTAGCA 57.238 42.857 11.35 0.00 42.31 3.49
133 134 2.175878 AGAGCAACCTGTTGTAGCAG 57.824 50.000 11.35 0.00 42.31 4.24
134 135 0.519077 GAGCAACCTGTTGTAGCAGC 59.481 55.000 11.35 0.00 42.31 5.25
135 136 0.179020 AGCAACCTGTTGTAGCAGCA 60.179 50.000 11.35 0.00 42.31 4.41
136 137 0.667993 GCAACCTGTTGTAGCAGCAA 59.332 50.000 11.35 0.00 42.31 3.91
137 138 1.066908 GCAACCTGTTGTAGCAGCAAA 59.933 47.619 11.35 0.00 42.31 3.68
138 139 2.859806 GCAACCTGTTGTAGCAGCAAAG 60.860 50.000 11.35 0.00 42.31 2.77
139 140 0.954452 ACCTGTTGTAGCAGCAAAGC 59.046 50.000 0.00 0.00 35.28 3.51
140 141 0.953727 CCTGTTGTAGCAGCAAAGCA 59.046 50.000 0.00 0.00 36.85 3.91
141 142 1.068748 CCTGTTGTAGCAGCAAAGCAG 60.069 52.381 0.00 0.00 36.85 4.24
142 143 1.605710 CTGTTGTAGCAGCAAAGCAGT 59.394 47.619 0.00 0.00 36.85 4.40
143 144 2.023673 TGTTGTAGCAGCAAAGCAGTT 58.976 42.857 0.00 0.00 36.85 3.16
144 145 3.210227 TGTTGTAGCAGCAAAGCAGTTA 58.790 40.909 0.00 0.00 36.85 2.24
145 146 3.629855 TGTTGTAGCAGCAAAGCAGTTAA 59.370 39.130 0.00 0.00 36.85 2.01
146 147 4.097135 TGTTGTAGCAGCAAAGCAGTTAAA 59.903 37.500 0.00 0.00 36.85 1.52
147 148 4.223320 TGTAGCAGCAAAGCAGTTAAAC 57.777 40.909 0.00 0.00 36.85 2.01
148 149 3.629855 TGTAGCAGCAAAGCAGTTAAACA 59.370 39.130 0.00 0.00 36.85 2.83
149 150 3.799281 AGCAGCAAAGCAGTTAAACAA 57.201 38.095 0.00 0.00 36.85 2.83
150 151 4.122143 AGCAGCAAAGCAGTTAAACAAA 57.878 36.364 0.00 0.00 36.85 2.83
151 152 4.114794 AGCAGCAAAGCAGTTAAACAAAG 58.885 39.130 0.00 0.00 36.85 2.77
152 153 4.111916 GCAGCAAAGCAGTTAAACAAAGA 58.888 39.130 0.00 0.00 0.00 2.52
153 154 4.566360 GCAGCAAAGCAGTTAAACAAAGAA 59.434 37.500 0.00 0.00 0.00 2.52
154 155 5.276536 GCAGCAAAGCAGTTAAACAAAGAAG 60.277 40.000 0.00 0.00 0.00 2.85
155 156 6.035843 CAGCAAAGCAGTTAAACAAAGAAGA 58.964 36.000 0.00 0.00 0.00 2.87
156 157 6.698766 CAGCAAAGCAGTTAAACAAAGAAGAT 59.301 34.615 0.00 0.00 0.00 2.40
157 158 7.223387 CAGCAAAGCAGTTAAACAAAGAAGATT 59.777 33.333 0.00 0.00 0.00 2.40
158 159 7.765819 AGCAAAGCAGTTAAACAAAGAAGATTT 59.234 29.630 0.00 0.00 0.00 2.17
159 160 7.847564 GCAAAGCAGTTAAACAAAGAAGATTTG 59.152 33.333 0.00 0.00 35.64 2.32
160 161 7.468922 AAGCAGTTAAACAAAGAAGATTTGC 57.531 32.000 0.43 0.00 32.93 3.68
161 162 6.572519 AGCAGTTAAACAAAGAAGATTTGCA 58.427 32.000 0.43 0.00 32.93 4.08
162 163 7.041107 AGCAGTTAAACAAAGAAGATTTGCAA 58.959 30.769 0.00 0.00 32.93 4.08
163 164 7.548780 AGCAGTTAAACAAAGAAGATTTGCAAA 59.451 29.630 15.44 15.44 32.93 3.68
164 165 8.174422 GCAGTTAAACAAAGAAGATTTGCAAAA 58.826 29.630 17.19 0.00 32.93 2.44
165 166 9.693157 CAGTTAAACAAAGAAGATTTGCAAAAG 57.307 29.630 17.19 1.92 32.93 2.27
166 167 8.882736 AGTTAAACAAAGAAGATTTGCAAAAGG 58.117 29.630 17.19 2.56 32.93 3.11
167 168 8.878769 GTTAAACAAAGAAGATTTGCAAAAGGA 58.121 29.630 17.19 0.00 32.93 3.36
168 169 7.920160 AAACAAAGAAGATTTGCAAAAGGAA 57.080 28.000 17.19 0.00 32.93 3.36
169 170 6.908870 ACAAAGAAGATTTGCAAAAGGAAC 57.091 33.333 17.19 7.23 32.93 3.62
170 171 5.817296 ACAAAGAAGATTTGCAAAAGGAACC 59.183 36.000 17.19 3.99 32.93 3.62
171 172 5.876651 AAGAAGATTTGCAAAAGGAACCT 57.123 34.783 17.19 6.20 0.00 3.50
172 173 5.876651 AGAAGATTTGCAAAAGGAACCTT 57.123 34.783 17.19 11.84 37.98 3.50
173 174 6.239217 AGAAGATTTGCAAAAGGAACCTTT 57.761 33.333 17.19 12.40 46.90 3.11
194 195 5.612725 TTTTTGCCATTGGAGTTTCTCTT 57.387 34.783 6.95 0.00 0.00 2.85
195 196 4.589216 TTTGCCATTGGAGTTTCTCTTG 57.411 40.909 6.95 0.00 0.00 3.02
196 197 2.517959 TGCCATTGGAGTTTCTCTTGG 58.482 47.619 6.95 0.00 32.47 3.61
197 198 2.108075 TGCCATTGGAGTTTCTCTTGGA 59.892 45.455 6.95 0.00 31.65 3.53
198 199 3.245371 TGCCATTGGAGTTTCTCTTGGAT 60.245 43.478 6.95 0.00 31.65 3.41
199 200 3.379688 GCCATTGGAGTTTCTCTTGGATC 59.620 47.826 6.95 0.00 31.65 3.36
200 201 3.950395 CCATTGGAGTTTCTCTTGGATCC 59.050 47.826 4.20 4.20 31.65 3.36
201 202 4.324874 CCATTGGAGTTTCTCTTGGATCCT 60.325 45.833 14.23 0.00 31.65 3.24
202 203 3.988976 TGGAGTTTCTCTTGGATCCTG 57.011 47.619 14.23 6.15 0.00 3.86
203 204 3.520696 TGGAGTTTCTCTTGGATCCTGA 58.479 45.455 14.23 10.31 0.00 3.86
204 205 3.909995 TGGAGTTTCTCTTGGATCCTGAA 59.090 43.478 14.23 9.28 0.00 3.02
205 206 4.350816 TGGAGTTTCTCTTGGATCCTGAAA 59.649 41.667 14.23 14.24 0.00 2.69
206 207 5.163099 TGGAGTTTCTCTTGGATCCTGAAAA 60.163 40.000 14.23 10.89 0.00 2.29
207 208 5.414144 GGAGTTTCTCTTGGATCCTGAAAAG 59.586 44.000 14.23 8.25 0.00 2.27
208 209 5.946486 AGTTTCTCTTGGATCCTGAAAAGT 58.054 37.500 14.23 12.69 0.00 2.66
209 210 6.368805 AGTTTCTCTTGGATCCTGAAAAGTT 58.631 36.000 14.23 5.60 0.00 2.66
210 211 6.264067 AGTTTCTCTTGGATCCTGAAAAGTTG 59.736 38.462 14.23 6.23 0.00 3.16
211 212 5.567037 TCTCTTGGATCCTGAAAAGTTGA 57.433 39.130 14.23 8.22 0.00 3.18
212 213 5.555017 TCTCTTGGATCCTGAAAAGTTGAG 58.445 41.667 14.23 2.94 0.00 3.02
213 214 5.072329 TCTCTTGGATCCTGAAAAGTTGAGT 59.928 40.000 14.23 0.00 0.00 3.41
214 215 6.270000 TCTCTTGGATCCTGAAAAGTTGAGTA 59.730 38.462 14.23 0.00 0.00 2.59
215 216 6.467677 TCTTGGATCCTGAAAAGTTGAGTAG 58.532 40.000 14.23 0.00 0.00 2.57
216 217 5.825593 TGGATCCTGAAAAGTTGAGTAGT 57.174 39.130 14.23 0.00 0.00 2.73
217 218 5.794894 TGGATCCTGAAAAGTTGAGTAGTC 58.205 41.667 14.23 0.00 0.00 2.59
218 219 5.306937 TGGATCCTGAAAAGTTGAGTAGTCA 59.693 40.000 14.23 0.00 0.00 3.41
219 220 5.872070 GGATCCTGAAAAGTTGAGTAGTCAG 59.128 44.000 3.84 0.00 32.98 3.51
220 221 5.871396 TCCTGAAAAGTTGAGTAGTCAGT 57.129 39.130 0.00 0.00 32.98 3.41
221 222 6.971726 TCCTGAAAAGTTGAGTAGTCAGTA 57.028 37.500 0.00 0.00 32.98 2.74
222 223 7.356089 TCCTGAAAAGTTGAGTAGTCAGTAA 57.644 36.000 0.00 0.00 32.98 2.24
223 224 7.208080 TCCTGAAAAGTTGAGTAGTCAGTAAC 58.792 38.462 0.00 0.00 32.98 2.50
224 225 7.069578 TCCTGAAAAGTTGAGTAGTCAGTAACT 59.930 37.037 0.00 0.00 42.33 2.24
225 226 7.711339 CCTGAAAAGTTGAGTAGTCAGTAACTT 59.289 37.037 9.41 9.41 39.55 2.66
226 227 8.420374 TGAAAAGTTGAGTAGTCAGTAACTTG 57.580 34.615 14.14 0.00 39.55 3.16
227 228 8.255206 TGAAAAGTTGAGTAGTCAGTAACTTGA 58.745 33.333 14.14 3.07 39.55 3.02
228 229 9.262358 GAAAAGTTGAGTAGTCAGTAACTTGAT 57.738 33.333 14.14 8.52 39.55 2.57
229 230 9.614792 AAAAGTTGAGTAGTCAGTAACTTGATT 57.385 29.630 14.14 6.04 39.55 2.57
231 232 9.915629 AAGTTGAGTAGTCAGTAACTTGATTAG 57.084 33.333 13.08 0.00 39.55 1.73
232 233 9.298250 AGTTGAGTAGTCAGTAACTTGATTAGA 57.702 33.333 0.00 0.00 39.55 2.10
233 234 9.562583 GTTGAGTAGTCAGTAACTTGATTAGAG 57.437 37.037 0.00 0.00 39.55 2.43
234 235 9.516546 TTGAGTAGTCAGTAACTTGATTAGAGA 57.483 33.333 0.00 0.00 39.55 3.10
235 236 9.516546 TGAGTAGTCAGTAACTTGATTAGAGAA 57.483 33.333 0.00 0.00 39.55 2.87
238 239 9.909644 GTAGTCAGTAACTTGATTAGAGAAACA 57.090 33.333 0.00 0.00 39.55 2.83
240 241 9.482627 AGTCAGTAACTTGATTAGAGAAACAAG 57.517 33.333 0.00 0.00 43.30 3.16
247 248 8.089115 ACTTGATTAGAGAAACAAGTTACAGC 57.911 34.615 0.00 0.00 46.69 4.40
248 249 7.715249 ACTTGATTAGAGAAACAAGTTACAGCA 59.285 33.333 0.00 0.00 46.69 4.41
249 250 7.658179 TGATTAGAGAAACAAGTTACAGCAG 57.342 36.000 0.00 0.00 0.00 4.24
250 251 5.924475 TTAGAGAAACAAGTTACAGCAGC 57.076 39.130 0.00 0.00 0.00 5.25
251 252 3.808728 AGAGAAACAAGTTACAGCAGCA 58.191 40.909 0.00 0.00 0.00 4.41
252 253 4.199310 AGAGAAACAAGTTACAGCAGCAA 58.801 39.130 0.00 0.00 0.00 3.91
253 254 4.640201 AGAGAAACAAGTTACAGCAGCAAA 59.360 37.500 0.00 0.00 0.00 3.68
254 255 4.672409 AGAAACAAGTTACAGCAGCAAAC 58.328 39.130 0.00 0.00 0.00 2.93
255 256 3.436700 AACAAGTTACAGCAGCAAACC 57.563 42.857 0.00 0.00 0.00 3.27
256 257 2.654863 ACAAGTTACAGCAGCAAACCT 58.345 42.857 0.00 0.00 0.00 3.50
257 258 2.358898 ACAAGTTACAGCAGCAAACCTG 59.641 45.455 0.00 0.00 44.67 4.00
258 259 2.348411 AGTTACAGCAGCAAACCTGT 57.652 45.000 0.00 0.00 43.71 4.00
259 260 2.654863 AGTTACAGCAGCAAACCTGTT 58.345 42.857 0.00 0.00 43.71 3.16
260 261 3.815809 AGTTACAGCAGCAAACCTGTTA 58.184 40.909 0.00 0.00 43.71 2.41
261 262 3.564225 AGTTACAGCAGCAAACCTGTTAC 59.436 43.478 0.00 0.74 43.71 2.50
262 263 2.051334 ACAGCAGCAAACCTGTTACA 57.949 45.000 0.00 0.00 43.71 2.41
263 264 1.676006 ACAGCAGCAAACCTGTTACAC 59.324 47.619 0.00 0.00 43.71 2.90
264 265 1.675483 CAGCAGCAAACCTGTTACACA 59.325 47.619 0.00 0.00 43.71 3.72
265 266 2.098934 CAGCAGCAAACCTGTTACACAA 59.901 45.455 0.00 0.00 43.71 3.33
266 267 2.757868 AGCAGCAAACCTGTTACACAAA 59.242 40.909 0.00 0.00 43.71 2.83
267 268 3.384467 AGCAGCAAACCTGTTACACAAAT 59.616 39.130 0.00 0.00 43.71 2.32
268 269 4.582656 AGCAGCAAACCTGTTACACAAATA 59.417 37.500 0.00 0.00 43.71 1.40
269 270 5.243730 AGCAGCAAACCTGTTACACAAATAT 59.756 36.000 0.00 0.00 43.71 1.28
270 271 6.432783 AGCAGCAAACCTGTTACACAAATATA 59.567 34.615 0.00 0.00 43.71 0.86
271 272 7.122650 AGCAGCAAACCTGTTACACAAATATAT 59.877 33.333 0.00 0.00 43.71 0.86
272 273 7.759433 GCAGCAAACCTGTTACACAAATATATT 59.241 33.333 0.00 0.00 43.71 1.28
273 274 9.638239 CAGCAAACCTGTTACACAAATATATTT 57.362 29.630 4.81 4.81 36.79 1.40
291 292 9.950680 AATATATTTTCGAAAATGTACCTGCTG 57.049 29.630 35.21 0.00 38.90 4.41
292 293 5.705609 ATTTTCGAAAATGTACCTGCTGT 57.294 34.783 30.13 7.16 37.24 4.40
293 294 4.481930 TTTCGAAAATGTACCTGCTGTG 57.518 40.909 8.44 0.00 0.00 3.66
294 295 1.804151 TCGAAAATGTACCTGCTGTGC 59.196 47.619 0.00 0.00 0.00 4.57
295 296 1.535028 CGAAAATGTACCTGCTGTGCA 59.465 47.619 0.88 0.88 44.01 4.57
296 297 2.031245 CGAAAATGTACCTGCTGTGCAA 60.031 45.455 0.00 0.00 43.08 4.08
297 298 3.366273 CGAAAATGTACCTGCTGTGCAAT 60.366 43.478 0.00 0.00 43.08 3.56
298 299 4.559153 GAAAATGTACCTGCTGTGCAATT 58.441 39.130 0.00 0.00 43.08 2.32
299 300 3.581024 AATGTACCTGCTGTGCAATTG 57.419 42.857 0.00 0.00 43.08 2.32
300 301 1.246649 TGTACCTGCTGTGCAATTGG 58.753 50.000 7.72 0.00 38.41 3.16
301 302 0.527565 GTACCTGCTGTGCAATTGGG 59.472 55.000 7.72 0.20 38.41 4.12
302 303 1.250154 TACCTGCTGTGCAATTGGGC 61.250 55.000 7.72 0.00 38.41 5.36
303 304 2.280552 CCTGCTGTGCAATTGGGCT 61.281 57.895 7.72 0.00 38.41 5.19
304 305 1.669440 CTGCTGTGCAATTGGGCTT 59.331 52.632 7.72 0.00 38.41 4.35
305 306 0.389426 CTGCTGTGCAATTGGGCTTC 60.389 55.000 7.72 0.00 38.41 3.86
306 307 1.079612 GCTGTGCAATTGGGCTTCC 60.080 57.895 7.72 0.00 34.04 3.46
307 308 1.818959 GCTGTGCAATTGGGCTTCCA 61.819 55.000 7.72 0.00 39.13 3.53
316 317 1.864669 TTGGGCTTCCAATTGGATCC 58.135 50.000 27.53 26.92 44.96 3.36
317 318 1.009997 TGGGCTTCCAATTGGATCCT 58.990 50.000 30.05 0.00 44.98 3.24
318 319 2.213310 TGGGCTTCCAATTGGATCCTA 58.787 47.619 30.05 25.81 44.98 2.94
319 320 2.584965 TGGGCTTCCAATTGGATCCTAA 59.415 45.455 30.05 21.60 44.98 2.69
320 321 3.012274 TGGGCTTCCAATTGGATCCTAAA 59.988 43.478 30.05 19.96 44.98 1.85
321 322 4.030216 GGGCTTCCAATTGGATCCTAAAA 58.970 43.478 30.05 15.90 44.98 1.52
322 323 4.469586 GGGCTTCCAATTGGATCCTAAAAA 59.530 41.667 30.05 15.33 44.98 1.94
323 324 5.419542 GGCTTCCAATTGGATCCTAAAAAC 58.580 41.667 27.53 6.48 44.98 2.43
324 325 5.187772 GGCTTCCAATTGGATCCTAAAAACT 59.812 40.000 27.53 0.00 44.98 2.66
325 326 6.295859 GGCTTCCAATTGGATCCTAAAAACTT 60.296 38.462 27.53 0.00 44.98 2.66
326 327 6.591448 GCTTCCAATTGGATCCTAAAAACTTG 59.409 38.462 27.53 6.41 44.98 3.16
327 328 7.525360 GCTTCCAATTGGATCCTAAAAACTTGA 60.525 37.037 27.53 6.78 44.98 3.02
328 329 7.847711 TCCAATTGGATCCTAAAAACTTGAA 57.152 32.000 23.63 0.00 39.78 2.69
329 330 7.895759 TCCAATTGGATCCTAAAAACTTGAAG 58.104 34.615 23.63 0.00 39.78 3.02
330 331 7.508977 TCCAATTGGATCCTAAAAACTTGAAGT 59.491 33.333 23.63 0.00 39.78 3.01
331 332 8.150296 CCAATTGGATCCTAAAAACTTGAAGTT 58.850 33.333 20.50 4.45 37.43 2.66
332 333 8.981647 CAATTGGATCCTAAAAACTTGAAGTTG 58.018 33.333 11.83 0.00 38.66 3.16
333 334 6.648879 TGGATCCTAAAAACTTGAAGTTGG 57.351 37.500 11.83 8.47 38.66 3.77
334 335 6.133356 TGGATCCTAAAAACTTGAAGTTGGT 58.867 36.000 11.83 5.25 38.66 3.67
335 336 7.291566 TGGATCCTAAAAACTTGAAGTTGGTA 58.708 34.615 11.83 6.13 38.66 3.25
336 337 7.780745 TGGATCCTAAAAACTTGAAGTTGGTAA 59.219 33.333 11.83 0.00 38.66 2.85
337 338 8.297426 GGATCCTAAAAACTTGAAGTTGGTAAG 58.703 37.037 11.83 7.08 38.66 2.34
338 339 8.990163 ATCCTAAAAACTTGAAGTTGGTAAGA 57.010 30.769 11.83 7.03 38.66 2.10
339 340 8.990163 TCCTAAAAACTTGAAGTTGGTAAGAT 57.010 30.769 11.83 0.00 38.66 2.40
340 341 8.846211 TCCTAAAAACTTGAAGTTGGTAAGATG 58.154 33.333 11.83 0.00 38.66 2.90
341 342 8.846211 CCTAAAAACTTGAAGTTGGTAAGATGA 58.154 33.333 11.83 0.00 38.66 2.92
342 343 9.884465 CTAAAAACTTGAAGTTGGTAAGATGAG 57.116 33.333 11.83 0.00 38.66 2.90
343 344 7.881775 AAAACTTGAAGTTGGTAAGATGAGT 57.118 32.000 11.83 0.00 38.66 3.41
344 345 8.974060 AAAACTTGAAGTTGGTAAGATGAGTA 57.026 30.769 11.83 0.00 38.66 2.59
345 346 7.964604 AACTTGAAGTTGGTAAGATGAGTAC 57.035 36.000 10.18 0.00 37.00 2.73
346 347 7.062749 ACTTGAAGTTGGTAAGATGAGTACA 57.937 36.000 0.00 0.00 0.00 2.90
347 348 7.506114 ACTTGAAGTTGGTAAGATGAGTACAA 58.494 34.615 0.00 0.00 0.00 2.41
348 349 7.441458 ACTTGAAGTTGGTAAGATGAGTACAAC 59.559 37.037 0.00 0.00 0.00 3.32
349 350 6.822442 TGAAGTTGGTAAGATGAGTACAACA 58.178 36.000 0.00 0.00 0.00 3.33
350 351 7.276658 TGAAGTTGGTAAGATGAGTACAACAA 58.723 34.615 0.00 0.00 0.00 2.83
351 352 7.225931 TGAAGTTGGTAAGATGAGTACAACAAC 59.774 37.037 0.00 0.00 36.77 3.32
352 353 6.588204 AGTTGGTAAGATGAGTACAACAACA 58.412 36.000 9.77 0.00 38.41 3.33
353 354 7.051623 AGTTGGTAAGATGAGTACAACAACAA 58.948 34.615 9.77 0.00 38.41 2.83
354 355 7.554835 AGTTGGTAAGATGAGTACAACAACAAA 59.445 33.333 9.77 0.00 38.41 2.83
355 356 8.349983 GTTGGTAAGATGAGTACAACAACAAAT 58.650 33.333 0.00 0.00 36.59 2.32
356 357 8.458573 TGGTAAGATGAGTACAACAACAAATT 57.541 30.769 0.00 0.00 0.00 1.82
357 358 9.562408 TGGTAAGATGAGTACAACAACAAATTA 57.438 29.630 0.00 0.00 0.00 1.40
358 359 9.821662 GGTAAGATGAGTACAACAACAAATTAC 57.178 33.333 0.00 0.00 0.00 1.89
361 362 7.584987 AGATGAGTACAACAACAAATTACAGC 58.415 34.615 0.00 0.00 0.00 4.40
362 363 6.685527 TGAGTACAACAACAAATTACAGCA 57.314 33.333 0.00 0.00 0.00 4.41
363 364 6.724263 TGAGTACAACAACAAATTACAGCAG 58.276 36.000 0.00 0.00 0.00 4.24
364 365 5.519722 AGTACAACAACAAATTACAGCAGC 58.480 37.500 0.00 0.00 0.00 5.25
365 366 4.383850 ACAACAACAAATTACAGCAGCA 57.616 36.364 0.00 0.00 0.00 4.41
366 367 4.753233 ACAACAACAAATTACAGCAGCAA 58.247 34.783 0.00 0.00 0.00 3.91
367 368 5.174395 ACAACAACAAATTACAGCAGCAAA 58.826 33.333 0.00 0.00 0.00 3.68
368 369 5.063312 ACAACAACAAATTACAGCAGCAAAC 59.937 36.000 0.00 0.00 0.00 2.93
369 370 4.119136 ACAACAAATTACAGCAGCAAACC 58.881 39.130 0.00 0.00 0.00 3.27
370 371 4.118410 CAACAAATTACAGCAGCAAACCA 58.882 39.130 0.00 0.00 0.00 3.67
371 372 3.981211 ACAAATTACAGCAGCAAACCAG 58.019 40.909 0.00 0.00 0.00 4.00
372 373 3.243839 ACAAATTACAGCAGCAAACCAGG 60.244 43.478 0.00 0.00 0.00 4.45
373 374 2.292828 ATTACAGCAGCAAACCAGGT 57.707 45.000 0.00 0.00 0.00 4.00
374 375 2.940994 TTACAGCAGCAAACCAGGTA 57.059 45.000 0.00 0.00 0.00 3.08
375 376 2.940994 TACAGCAGCAAACCAGGTAA 57.059 45.000 0.00 0.00 0.00 2.85
376 377 2.065899 ACAGCAGCAAACCAGGTAAA 57.934 45.000 0.00 0.00 0.00 2.01
377 378 1.681264 ACAGCAGCAAACCAGGTAAAC 59.319 47.619 0.00 0.00 0.00 2.01
378 379 1.680735 CAGCAGCAAACCAGGTAAACA 59.319 47.619 0.00 0.00 0.00 2.83
379 380 2.100584 CAGCAGCAAACCAGGTAAACAA 59.899 45.455 0.00 0.00 0.00 2.83
380 381 2.362077 AGCAGCAAACCAGGTAAACAAG 59.638 45.455 0.00 0.00 0.00 3.16
381 382 2.545742 GCAGCAAACCAGGTAAACAAGG 60.546 50.000 0.00 0.00 0.00 3.61
382 383 2.955660 CAGCAAACCAGGTAAACAAGGA 59.044 45.455 0.00 0.00 0.00 3.36
383 384 3.383185 CAGCAAACCAGGTAAACAAGGAA 59.617 43.478 0.00 0.00 0.00 3.36
384 385 3.636764 AGCAAACCAGGTAAACAAGGAAG 59.363 43.478 0.00 0.00 0.00 3.46
385 386 3.383505 GCAAACCAGGTAAACAAGGAAGT 59.616 43.478 0.00 0.00 0.00 3.01
386 387 4.142026 GCAAACCAGGTAAACAAGGAAGTT 60.142 41.667 0.00 0.00 0.00 2.66
387 388 5.625886 GCAAACCAGGTAAACAAGGAAGTTT 60.626 40.000 0.00 0.00 43.58 2.66
388 389 6.403049 CAAACCAGGTAAACAAGGAAGTTTT 58.597 36.000 0.00 0.00 41.58 2.43
389 390 6.614694 AACCAGGTAAACAAGGAAGTTTTT 57.385 33.333 0.00 0.00 41.58 1.94
390 391 5.972935 ACCAGGTAAACAAGGAAGTTTTTG 58.027 37.500 0.00 0.93 41.58 2.44
391 392 5.717654 ACCAGGTAAACAAGGAAGTTTTTGA 59.282 36.000 0.00 0.00 41.58 2.69
392 393 6.211785 ACCAGGTAAACAAGGAAGTTTTTGAA 59.788 34.615 0.00 0.00 41.58 2.69
393 394 7.100409 CCAGGTAAACAAGGAAGTTTTTGAAA 58.900 34.615 7.74 0.00 41.58 2.69
394 395 7.604545 CCAGGTAAACAAGGAAGTTTTTGAAAA 59.395 33.333 7.74 0.00 41.58 2.29
395 396 8.440059 CAGGTAAACAAGGAAGTTTTTGAAAAC 58.560 33.333 10.55 10.55 46.54 2.43
409 410 7.792925 GTTTTTGAAAACATACCTATTGTGCC 58.207 34.615 13.00 0.00 45.72 5.01
410 411 6.656632 TTTGAAAACATACCTATTGTGCCA 57.343 33.333 0.00 0.00 0.00 4.92
411 412 6.656632 TTGAAAACATACCTATTGTGCCAA 57.343 33.333 0.00 0.00 0.00 4.52
412 413 6.019779 TGAAAACATACCTATTGTGCCAAC 57.980 37.500 0.00 0.00 0.00 3.77
413 414 4.695217 AAACATACCTATTGTGCCAACG 57.305 40.909 0.00 0.00 0.00 4.10
414 415 2.639065 ACATACCTATTGTGCCAACGG 58.361 47.619 0.00 0.00 0.00 4.44
415 416 2.237643 ACATACCTATTGTGCCAACGGA 59.762 45.455 10.18 0.00 0.00 4.69
416 417 2.684001 TACCTATTGTGCCAACGGAG 57.316 50.000 10.18 1.64 0.00 4.63
430 431 2.474410 ACGGAGTTTCAGTTGGATCC 57.526 50.000 4.20 4.20 37.78 3.36
431 432 1.978580 ACGGAGTTTCAGTTGGATCCT 59.021 47.619 14.23 0.00 37.78 3.24
432 433 2.289694 ACGGAGTTTCAGTTGGATCCTG 60.290 50.000 14.23 2.92 37.78 3.86
433 434 2.087646 GGAGTTTCAGTTGGATCCTGC 58.912 52.381 14.23 5.65 0.00 4.85
434 435 2.553028 GGAGTTTCAGTTGGATCCTGCA 60.553 50.000 14.23 0.00 0.00 4.41
435 436 3.149196 GAGTTTCAGTTGGATCCTGCAA 58.851 45.455 14.23 0.00 0.00 4.08
436 437 3.565307 AGTTTCAGTTGGATCCTGCAAA 58.435 40.909 14.23 2.38 26.96 3.68
437 438 3.319122 AGTTTCAGTTGGATCCTGCAAAC 59.681 43.478 14.23 13.58 34.19 2.93
438 439 2.957402 TCAGTTGGATCCTGCAAACT 57.043 45.000 14.23 11.20 26.96 2.66
439 440 3.228188 TCAGTTGGATCCTGCAAACTT 57.772 42.857 14.23 0.00 26.96 2.66
440 441 2.886523 TCAGTTGGATCCTGCAAACTTG 59.113 45.455 14.23 8.94 26.96 3.16
441 442 2.886523 CAGTTGGATCCTGCAAACTTGA 59.113 45.455 14.23 0.00 26.96 3.02
442 443 3.318839 CAGTTGGATCCTGCAAACTTGAA 59.681 43.478 14.23 0.00 26.96 2.69
443 444 4.021719 CAGTTGGATCCTGCAAACTTGAAT 60.022 41.667 14.23 0.00 26.96 2.57
444 445 4.021719 AGTTGGATCCTGCAAACTTGAATG 60.022 41.667 14.23 0.00 26.96 2.67
445 446 3.499338 TGGATCCTGCAAACTTGAATGT 58.501 40.909 14.23 0.00 0.00 2.71
446 447 3.896888 TGGATCCTGCAAACTTGAATGTT 59.103 39.130 14.23 0.00 0.00 2.71
447 448 5.076182 TGGATCCTGCAAACTTGAATGTTA 58.924 37.500 14.23 0.00 0.00 2.41
448 449 5.183713 TGGATCCTGCAAACTTGAATGTTAG 59.816 40.000 14.23 0.00 0.00 2.34
449 450 4.503741 TCCTGCAAACTTGAATGTTAGC 57.496 40.909 0.00 0.00 0.00 3.09
450 451 3.888323 TCCTGCAAACTTGAATGTTAGCA 59.112 39.130 0.00 0.00 0.00 3.49
451 452 4.340666 TCCTGCAAACTTGAATGTTAGCAA 59.659 37.500 0.00 0.00 0.00 3.91
452 453 5.010922 TCCTGCAAACTTGAATGTTAGCAAT 59.989 36.000 0.00 0.00 0.00 3.56
453 454 5.346822 CCTGCAAACTTGAATGTTAGCAATC 59.653 40.000 0.00 0.00 0.00 2.67
454 455 5.840715 TGCAAACTTGAATGTTAGCAATCA 58.159 33.333 0.00 0.00 33.12 2.57
455 456 6.457355 TGCAAACTTGAATGTTAGCAATCAT 58.543 32.000 0.00 0.00 34.81 2.45
456 457 7.600960 TGCAAACTTGAATGTTAGCAATCATA 58.399 30.769 0.00 0.00 34.81 2.15
457 458 8.087136 TGCAAACTTGAATGTTAGCAATCATAA 58.913 29.630 0.00 0.00 34.81 1.90
458 459 8.924691 GCAAACTTGAATGTTAGCAATCATAAA 58.075 29.630 0.00 0.00 34.81 1.40
491 492 1.636148 TACGTCTGTGCCCCTAGTTT 58.364 50.000 0.00 0.00 0.00 2.66
527 528 2.742348 TCATCCCCACGCTCTTAACTA 58.258 47.619 0.00 0.00 0.00 2.24
559 566 2.677228 CCACTCCCTTGCCCGAAT 59.323 61.111 0.00 0.00 0.00 3.34
569 576 0.918983 TTGCCCGAATCCCTCAGAAT 59.081 50.000 0.00 0.00 0.00 2.40
579 586 6.464465 CCGAATCCCTCAGAATAGGTTACAAT 60.464 42.308 0.00 0.00 34.56 2.71
609 616 1.463674 GTCGGGTCAATGCCTTTGAT 58.536 50.000 2.89 0.00 45.77 2.57
748 758 4.881273 ACCGTACAGTGGTATTCGTATACA 59.119 41.667 13.33 0.00 38.71 2.29
754 764 3.644265 AGTGGTATTCGTATACATGGGCA 59.356 43.478 13.33 0.37 38.71 5.36
786 796 2.524640 TGGTCGTGGGGTAGCACA 60.525 61.111 0.00 0.00 0.00 4.57
814 824 2.559998 GGACATGCCCAAAACGTATG 57.440 50.000 0.00 0.00 0.00 2.39
873 898 2.247372 CCCTACCATTTCCCCCAAATCT 59.753 50.000 0.00 0.00 31.79 2.40
938 967 1.611851 CTCCTCCACTGCCTCCACT 60.612 63.158 0.00 0.00 0.00 4.00
954 983 1.007848 CACTGCACTGTCTCGCTCTG 61.008 60.000 0.00 0.00 0.00 3.35
1051 1080 1.765230 GGACGGAGATGTAGTGGAGT 58.235 55.000 0.00 0.00 0.00 3.85
1143 1172 1.741401 CGCTGCGGATGTGGAGAAA 60.741 57.895 15.40 0.00 0.00 2.52
1173 1202 2.848679 TCCACCTCAGCACTGCCA 60.849 61.111 0.00 0.00 0.00 4.92
1181 1210 1.207570 CTCAGCACTGCCAGAGAAGAT 59.792 52.381 13.35 0.00 34.56 2.40
1351 1392 4.235360 CAGACGGTTAGAGTAGTTGGTTG 58.765 47.826 0.00 0.00 0.00 3.77
1380 1425 2.291089 GGGTCGGGGTTTTCTTTATGGA 60.291 50.000 0.00 0.00 0.00 3.41
1725 2389 4.422840 TCTGTTGTTCAATTTGTGTGCAG 58.577 39.130 0.00 1.53 0.00 4.41
1890 2570 1.574263 AGAGGAAGCTGGACCTTACC 58.426 55.000 8.44 0.00 36.57 2.85
2124 2812 2.713708 GAGAAGATTAGGGCCAAGGGAT 59.286 50.000 6.18 0.00 0.00 3.85
2185 2873 2.034879 CCTACTGCACCACCAAGCG 61.035 63.158 0.00 0.00 0.00 4.68
2227 2915 2.299013 TCGTTCACCTTGTAGCTCATGT 59.701 45.455 0.00 0.00 0.00 3.21
2302 3004 0.037232 GTGAAAGTCCTGACTCCCCG 60.037 60.000 0.00 0.00 41.58 5.73
2308 3024 1.381327 TCCTGACTCCCCGGTGATC 60.381 63.158 0.00 0.00 0.00 2.92
2365 3081 3.438781 TGAACTTTGTGTGTGAACTGGAC 59.561 43.478 0.00 0.00 0.00 4.02
2631 3360 6.488817 GCAAAAAGCAACATTTGAATGAAGT 58.511 32.000 10.48 0.00 44.79 3.01
2702 3432 8.063339 TCATGTTTATTAATCAAATGCATGCG 57.937 30.769 14.09 0.00 35.65 4.73
2744 3477 7.278646 TCTCATTATCCGATGTTTTGAACTGAG 59.721 37.037 0.00 0.00 0.00 3.35
2766 3499 6.094464 TGAGATTCAGCAGGACAACATAAATG 59.906 38.462 0.00 0.00 0.00 2.32
2830 3579 1.137086 GTGTAGGAGATCGGTGTGCAT 59.863 52.381 0.00 0.00 0.00 3.96
2832 3581 2.623416 TGTAGGAGATCGGTGTGCATAG 59.377 50.000 0.00 0.00 0.00 2.23
2859 3608 5.488919 TGAGGTGATTTAGAGGAGGTCAAAT 59.511 40.000 0.00 0.00 0.00 2.32
2929 3678 6.941857 GGTAAACAACCCCATTTGTAATCAT 58.058 36.000 0.00 0.00 43.16 2.45
3126 3885 5.047566 TGGAAAAACTCAGTTCAGATCCA 57.952 39.130 8.66 8.66 32.33 3.41
3221 3984 1.353091 ACCACCTCTCCTTGAACTCC 58.647 55.000 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 1.197721 CTTCTTTGCTGCTACAACCGG 59.802 52.381 0.00 0.00 0.00 5.28
12 13 5.432885 TTTGGTAACTTCTTTGCTGCTAC 57.567 39.130 0.00 0.00 37.61 3.58
13 14 6.458232 TTTTTGGTAACTTCTTTGCTGCTA 57.542 33.333 0.00 0.00 37.61 3.49
14 15 5.337578 TTTTTGGTAACTTCTTTGCTGCT 57.662 34.783 0.00 0.00 37.61 4.24
33 34 6.234920 ACAGGTACCTTTTGCAAAACTTTTT 58.765 32.000 20.46 5.98 0.00 1.94
34 35 5.800296 ACAGGTACCTTTTGCAAAACTTTT 58.200 33.333 20.46 7.61 0.00 2.27
35 36 5.414789 ACAGGTACCTTTTGCAAAACTTT 57.585 34.783 20.46 9.93 0.00 2.66
36 37 5.175127 CAACAGGTACCTTTTGCAAAACTT 58.825 37.500 24.11 12.28 28.86 2.66
37 38 4.221924 ACAACAGGTACCTTTTGCAAAACT 59.778 37.500 31.70 14.83 37.27 2.66
38 39 4.328712 CACAACAGGTACCTTTTGCAAAAC 59.671 41.667 31.70 11.51 37.27 2.43
39 40 4.499183 CACAACAGGTACCTTTTGCAAAA 58.501 39.130 31.70 22.61 37.27 2.44
40 41 3.118956 CCACAACAGGTACCTTTTGCAAA 60.119 43.478 31.70 8.05 37.27 3.68
41 42 2.428890 CCACAACAGGTACCTTTTGCAA 59.571 45.455 31.70 0.00 37.27 4.08
42 43 2.028130 CCACAACAGGTACCTTTTGCA 58.972 47.619 31.70 0.00 37.27 4.08
43 44 1.269569 GCCACAACAGGTACCTTTTGC 60.270 52.381 31.70 19.34 37.27 3.68
44 45 2.028130 TGCCACAACAGGTACCTTTTG 58.972 47.619 30.64 30.64 39.03 2.44
45 46 2.445682 TGCCACAACAGGTACCTTTT 57.554 45.000 13.15 10.04 0.00 2.27
46 47 2.627699 CAATGCCACAACAGGTACCTTT 59.372 45.455 13.15 2.20 0.00 3.11
47 48 2.238521 CAATGCCACAACAGGTACCTT 58.761 47.619 13.15 0.78 0.00 3.50
48 49 1.547675 CCAATGCCACAACAGGTACCT 60.548 52.381 9.21 9.21 0.00 3.08
49 50 0.887933 CCAATGCCACAACAGGTACC 59.112 55.000 2.73 2.73 0.00 3.34
50 51 1.812571 CTCCAATGCCACAACAGGTAC 59.187 52.381 0.00 0.00 0.00 3.34
51 52 1.423541 ACTCCAATGCCACAACAGGTA 59.576 47.619 0.00 0.00 0.00 3.08
52 53 0.185901 ACTCCAATGCCACAACAGGT 59.814 50.000 0.00 0.00 0.00 4.00
53 54 1.331214 AACTCCAATGCCACAACAGG 58.669 50.000 0.00 0.00 0.00 4.00
54 55 2.624838 AGAAACTCCAATGCCACAACAG 59.375 45.455 0.00 0.00 0.00 3.16
55 56 2.622942 GAGAAACTCCAATGCCACAACA 59.377 45.455 0.00 0.00 0.00 3.33
56 57 2.887152 AGAGAAACTCCAATGCCACAAC 59.113 45.455 0.00 0.00 0.00 3.32
57 58 3.228188 AGAGAAACTCCAATGCCACAA 57.772 42.857 0.00 0.00 0.00 3.33
58 59 2.886523 CAAGAGAAACTCCAATGCCACA 59.113 45.455 0.00 0.00 0.00 4.17
59 60 2.229784 CCAAGAGAAACTCCAATGCCAC 59.770 50.000 0.00 0.00 0.00 5.01
60 61 2.108075 TCCAAGAGAAACTCCAATGCCA 59.892 45.455 0.00 0.00 0.00 4.92
61 62 2.795329 TCCAAGAGAAACTCCAATGCC 58.205 47.619 0.00 0.00 0.00 4.40
62 63 3.379688 GGATCCAAGAGAAACTCCAATGC 59.620 47.826 6.95 0.00 0.00 3.56
63 64 4.639310 CAGGATCCAAGAGAAACTCCAATG 59.361 45.833 15.82 0.00 0.00 2.82
64 65 4.537688 TCAGGATCCAAGAGAAACTCCAAT 59.462 41.667 15.82 0.00 0.00 3.16
65 66 3.909995 TCAGGATCCAAGAGAAACTCCAA 59.090 43.478 15.82 0.00 0.00 3.53
66 67 3.520696 TCAGGATCCAAGAGAAACTCCA 58.479 45.455 15.82 0.00 0.00 3.86
67 68 4.559862 TTCAGGATCCAAGAGAAACTCC 57.440 45.455 15.82 0.00 0.00 3.85
68 69 6.000840 ACTTTTCAGGATCCAAGAGAAACTC 58.999 40.000 15.82 0.00 0.00 3.01
69 70 5.946486 ACTTTTCAGGATCCAAGAGAAACT 58.054 37.500 15.82 4.10 0.00 2.66
70 71 6.263168 TCAACTTTTCAGGATCCAAGAGAAAC 59.737 38.462 15.82 0.00 0.00 2.78
71 72 6.364701 TCAACTTTTCAGGATCCAAGAGAAA 58.635 36.000 15.82 14.69 0.00 2.52
72 73 5.940617 TCAACTTTTCAGGATCCAAGAGAA 58.059 37.500 15.82 11.62 0.00 2.87
73 74 5.072329 ACTCAACTTTTCAGGATCCAAGAGA 59.928 40.000 15.82 10.79 0.00 3.10
74 75 5.312079 ACTCAACTTTTCAGGATCCAAGAG 58.688 41.667 15.82 7.63 0.00 2.85
75 76 5.310409 ACTCAACTTTTCAGGATCCAAGA 57.690 39.130 15.82 8.77 0.00 3.02
76 77 6.317391 GGATACTCAACTTTTCAGGATCCAAG 59.683 42.308 15.82 11.15 44.48 3.61
77 78 6.180472 GGATACTCAACTTTTCAGGATCCAA 58.820 40.000 15.82 0.00 44.48 3.53
78 79 5.745227 GGATACTCAACTTTTCAGGATCCA 58.255 41.667 15.82 0.00 44.48 3.41
79 80 5.745227 TGGATACTCAACTTTTCAGGATCC 58.255 41.667 2.48 2.48 45.10 3.36
80 81 6.410540 ACTGGATACTCAACTTTTCAGGATC 58.589 40.000 0.00 0.00 37.61 3.36
81 82 6.380079 ACTGGATACTCAACTTTTCAGGAT 57.620 37.500 0.00 0.00 37.61 3.24
82 83 5.825593 ACTGGATACTCAACTTTTCAGGA 57.174 39.130 0.00 0.00 37.61 3.86
83 84 6.934645 TGTTACTGGATACTCAACTTTTCAGG 59.065 38.462 0.00 0.00 37.61 3.86
84 85 7.962964 TGTTACTGGATACTCAACTTTTCAG 57.037 36.000 0.00 0.00 37.61 3.02
85 86 8.154203 TCATGTTACTGGATACTCAACTTTTCA 58.846 33.333 0.00 0.00 37.61 2.69
86 87 8.547967 TCATGTTACTGGATACTCAACTTTTC 57.452 34.615 0.00 0.00 37.61 2.29
87 88 9.520515 AATCATGTTACTGGATACTCAACTTTT 57.479 29.630 0.00 0.00 37.61 2.27
89 90 9.823647 CTAATCATGTTACTGGATACTCAACTT 57.176 33.333 0.00 0.00 37.61 2.66
90 91 9.201989 TCTAATCATGTTACTGGATACTCAACT 57.798 33.333 0.00 0.00 37.61 3.16
91 92 9.469807 CTCTAATCATGTTACTGGATACTCAAC 57.530 37.037 0.00 0.00 37.61 3.18
92 93 8.144478 GCTCTAATCATGTTACTGGATACTCAA 58.856 37.037 0.00 0.00 37.61 3.02
93 94 7.287696 TGCTCTAATCATGTTACTGGATACTCA 59.712 37.037 0.00 0.00 37.61 3.41
94 95 7.661968 TGCTCTAATCATGTTACTGGATACTC 58.338 38.462 0.00 0.00 37.61 2.59
95 96 7.603180 TGCTCTAATCATGTTACTGGATACT 57.397 36.000 0.00 0.00 37.61 2.12
96 97 7.171678 GGTTGCTCTAATCATGTTACTGGATAC 59.828 40.741 0.00 0.00 0.00 2.24
97 98 7.071196 AGGTTGCTCTAATCATGTTACTGGATA 59.929 37.037 0.00 0.00 0.00 2.59
98 99 6.058183 GGTTGCTCTAATCATGTTACTGGAT 58.942 40.000 0.00 0.00 0.00 3.41
99 100 5.189736 AGGTTGCTCTAATCATGTTACTGGA 59.810 40.000 0.00 0.00 0.00 3.86
100 101 5.295292 CAGGTTGCTCTAATCATGTTACTGG 59.705 44.000 0.00 0.00 0.00 4.00
101 102 5.877012 ACAGGTTGCTCTAATCATGTTACTG 59.123 40.000 0.00 0.00 0.00 2.74
102 103 6.054860 ACAGGTTGCTCTAATCATGTTACT 57.945 37.500 0.00 0.00 0.00 2.24
103 104 6.149474 ACAACAGGTTGCTCTAATCATGTTAC 59.851 38.462 11.84 0.00 44.03 2.50
104 105 6.237901 ACAACAGGTTGCTCTAATCATGTTA 58.762 36.000 11.84 0.00 44.03 2.41
105 106 5.072741 ACAACAGGTTGCTCTAATCATGTT 58.927 37.500 11.84 0.00 44.03 2.71
106 107 4.655963 ACAACAGGTTGCTCTAATCATGT 58.344 39.130 11.84 0.00 44.03 3.21
107 108 5.220739 GCTACAACAGGTTGCTCTAATCATG 60.221 44.000 11.84 0.00 43.61 3.07
108 109 4.878397 GCTACAACAGGTTGCTCTAATCAT 59.122 41.667 11.84 0.00 43.61 2.45
109 110 4.253685 GCTACAACAGGTTGCTCTAATCA 58.746 43.478 11.84 0.00 43.61 2.57
110 111 4.253685 TGCTACAACAGGTTGCTCTAATC 58.746 43.478 11.84 0.00 46.50 1.75
111 112 4.256920 CTGCTACAACAGGTTGCTCTAAT 58.743 43.478 11.84 0.00 46.50 1.73
112 113 3.664107 CTGCTACAACAGGTTGCTCTAA 58.336 45.455 11.84 0.00 46.50 2.10
113 114 2.612972 GCTGCTACAACAGGTTGCTCTA 60.613 50.000 11.84 0.00 46.50 2.43
114 115 1.879796 GCTGCTACAACAGGTTGCTCT 60.880 52.381 11.84 0.00 46.50 4.09
115 116 0.519077 GCTGCTACAACAGGTTGCTC 59.481 55.000 11.84 2.70 46.50 4.26
116 117 0.179020 TGCTGCTACAACAGGTTGCT 60.179 50.000 11.84 2.93 46.50 3.91
117 118 0.667993 TTGCTGCTACAACAGGTTGC 59.332 50.000 11.84 0.00 46.54 4.17
118 119 2.859806 GCTTTGCTGCTACAACAGGTTG 60.860 50.000 10.45 10.45 45.58 3.77
119 120 1.338020 GCTTTGCTGCTACAACAGGTT 59.662 47.619 0.00 0.00 38.16 3.50
120 121 0.954452 GCTTTGCTGCTACAACAGGT 59.046 50.000 0.00 0.00 38.16 4.00
121 122 0.953727 TGCTTTGCTGCTACAACAGG 59.046 50.000 0.00 0.00 38.16 4.00
122 123 1.605710 ACTGCTTTGCTGCTACAACAG 59.394 47.619 0.00 5.09 40.80 3.16
123 124 1.679139 ACTGCTTTGCTGCTACAACA 58.321 45.000 0.00 0.00 0.00 3.33
124 125 2.781945 AACTGCTTTGCTGCTACAAC 57.218 45.000 0.00 0.00 0.00 3.32
125 126 4.097135 TGTTTAACTGCTTTGCTGCTACAA 59.903 37.500 0.00 0.00 0.00 2.41
126 127 3.629855 TGTTTAACTGCTTTGCTGCTACA 59.370 39.130 0.00 0.00 0.00 2.74
127 128 4.223320 TGTTTAACTGCTTTGCTGCTAC 57.777 40.909 0.00 0.00 0.00 3.58
128 129 4.909696 TTGTTTAACTGCTTTGCTGCTA 57.090 36.364 0.00 0.00 0.00 3.49
129 130 3.799281 TTGTTTAACTGCTTTGCTGCT 57.201 38.095 0.00 0.00 0.00 4.24
130 131 4.111916 TCTTTGTTTAACTGCTTTGCTGC 58.888 39.130 0.00 0.00 0.00 5.25
131 132 6.035843 TCTTCTTTGTTTAACTGCTTTGCTG 58.964 36.000 0.00 0.00 0.00 4.41
132 133 6.207691 TCTTCTTTGTTTAACTGCTTTGCT 57.792 33.333 0.00 0.00 0.00 3.91
133 134 7.468922 AATCTTCTTTGTTTAACTGCTTTGC 57.531 32.000 0.00 0.00 0.00 3.68
134 135 7.847564 GCAAATCTTCTTTGTTTAACTGCTTTG 59.152 33.333 0.00 0.00 0.00 2.77
135 136 7.548780 TGCAAATCTTCTTTGTTTAACTGCTTT 59.451 29.630 0.00 0.00 0.00 3.51
136 137 7.041107 TGCAAATCTTCTTTGTTTAACTGCTT 58.959 30.769 0.00 0.00 0.00 3.91
137 138 6.572519 TGCAAATCTTCTTTGTTTAACTGCT 58.427 32.000 0.00 0.00 0.00 4.24
138 139 6.826893 TGCAAATCTTCTTTGTTTAACTGC 57.173 33.333 0.00 0.00 0.00 4.40
139 140 9.693157 CTTTTGCAAATCTTCTTTGTTTAACTG 57.307 29.630 13.65 0.00 0.00 3.16
140 141 8.882736 CCTTTTGCAAATCTTCTTTGTTTAACT 58.117 29.630 13.65 0.00 0.00 2.24
141 142 8.878769 TCCTTTTGCAAATCTTCTTTGTTTAAC 58.121 29.630 13.65 0.00 0.00 2.01
142 143 9.442047 TTCCTTTTGCAAATCTTCTTTGTTTAA 57.558 25.926 13.65 0.00 0.00 1.52
143 144 8.878769 GTTCCTTTTGCAAATCTTCTTTGTTTA 58.121 29.630 13.65 0.00 0.00 2.01
144 145 7.148255 GGTTCCTTTTGCAAATCTTCTTTGTTT 60.148 33.333 13.65 0.00 0.00 2.83
145 146 6.316140 GGTTCCTTTTGCAAATCTTCTTTGTT 59.684 34.615 13.65 0.00 0.00 2.83
146 147 5.817296 GGTTCCTTTTGCAAATCTTCTTTGT 59.183 36.000 13.65 0.00 0.00 2.83
147 148 6.051074 AGGTTCCTTTTGCAAATCTTCTTTG 58.949 36.000 13.65 0.00 0.00 2.77
148 149 6.239217 AGGTTCCTTTTGCAAATCTTCTTT 57.761 33.333 13.65 0.00 0.00 2.52
149 150 5.876651 AGGTTCCTTTTGCAAATCTTCTT 57.123 34.783 13.65 0.00 0.00 2.52
150 151 5.876651 AAGGTTCCTTTTGCAAATCTTCT 57.123 34.783 13.65 3.86 0.00 2.85
151 152 6.925610 AAAAGGTTCCTTTTGCAAATCTTC 57.074 33.333 23.40 3.37 42.48 2.87
172 173 5.358922 CAAGAGAAACTCCAATGGCAAAAA 58.641 37.500 0.00 0.00 0.00 1.94
173 174 4.202243 CCAAGAGAAACTCCAATGGCAAAA 60.202 41.667 0.00 0.00 0.00 2.44
174 175 3.321682 CCAAGAGAAACTCCAATGGCAAA 59.678 43.478 0.00 0.00 0.00 3.68
175 176 2.892852 CCAAGAGAAACTCCAATGGCAA 59.107 45.455 0.00 0.00 0.00 4.52
176 177 2.108075 TCCAAGAGAAACTCCAATGGCA 59.892 45.455 0.00 0.00 32.71 4.92
177 178 2.795329 TCCAAGAGAAACTCCAATGGC 58.205 47.619 0.00 0.00 32.71 4.40
178 179 3.950395 GGATCCAAGAGAAACTCCAATGG 59.050 47.826 6.95 0.00 33.42 3.16
179 180 4.639310 CAGGATCCAAGAGAAACTCCAATG 59.361 45.833 15.82 0.00 0.00 2.82
180 181 4.537688 TCAGGATCCAAGAGAAACTCCAAT 59.462 41.667 15.82 0.00 0.00 3.16
181 182 3.909995 TCAGGATCCAAGAGAAACTCCAA 59.090 43.478 15.82 0.00 0.00 3.53
182 183 3.520696 TCAGGATCCAAGAGAAACTCCA 58.479 45.455 15.82 0.00 0.00 3.86
183 184 4.559862 TTCAGGATCCAAGAGAAACTCC 57.440 45.455 15.82 0.00 0.00 3.85
184 185 6.000840 ACTTTTCAGGATCCAAGAGAAACTC 58.999 40.000 15.82 0.00 0.00 3.01
185 186 5.946486 ACTTTTCAGGATCCAAGAGAAACT 58.054 37.500 15.82 4.10 0.00 2.66
186 187 6.263168 TCAACTTTTCAGGATCCAAGAGAAAC 59.737 38.462 15.82 0.00 0.00 2.78
187 188 6.364701 TCAACTTTTCAGGATCCAAGAGAAA 58.635 36.000 15.82 14.69 0.00 2.52
188 189 5.940617 TCAACTTTTCAGGATCCAAGAGAA 58.059 37.500 15.82 11.62 0.00 2.87
189 190 5.072329 ACTCAACTTTTCAGGATCCAAGAGA 59.928 40.000 15.82 10.79 0.00 3.10
190 191 5.312079 ACTCAACTTTTCAGGATCCAAGAG 58.688 41.667 15.82 7.63 0.00 2.85
191 192 5.310409 ACTCAACTTTTCAGGATCCAAGA 57.690 39.130 15.82 8.77 0.00 3.02
192 193 6.234177 ACTACTCAACTTTTCAGGATCCAAG 58.766 40.000 15.82 11.15 0.00 3.61
193 194 6.183361 TGACTACTCAACTTTTCAGGATCCAA 60.183 38.462 15.82 0.00 0.00 3.53
194 195 5.306937 TGACTACTCAACTTTTCAGGATCCA 59.693 40.000 15.82 0.00 0.00 3.41
195 196 5.794894 TGACTACTCAACTTTTCAGGATCC 58.205 41.667 2.48 2.48 0.00 3.36
196 197 6.459923 ACTGACTACTCAACTTTTCAGGATC 58.540 40.000 0.00 0.00 35.76 3.36
197 198 6.426646 ACTGACTACTCAACTTTTCAGGAT 57.573 37.500 0.00 0.00 35.76 3.24
198 199 5.871396 ACTGACTACTCAACTTTTCAGGA 57.129 39.130 0.00 0.00 35.76 3.86
199 200 7.210873 AGTTACTGACTACTCAACTTTTCAGG 58.789 38.462 0.00 0.00 36.65 3.86
200 201 8.543774 CAAGTTACTGACTACTCAACTTTTCAG 58.456 37.037 0.00 0.00 37.34 3.02
201 202 8.255206 TCAAGTTACTGACTACTCAACTTTTCA 58.745 33.333 0.00 0.00 37.34 2.69
202 203 8.644318 TCAAGTTACTGACTACTCAACTTTTC 57.356 34.615 0.00 0.00 37.34 2.29
203 204 9.614792 AATCAAGTTACTGACTACTCAACTTTT 57.385 29.630 0.00 0.00 37.34 2.27
205 206 9.915629 CTAATCAAGTTACTGACTACTCAACTT 57.084 33.333 0.00 0.00 39.39 2.66
206 207 9.298250 TCTAATCAAGTTACTGACTACTCAACT 57.702 33.333 0.00 0.00 37.72 3.16
207 208 9.562583 CTCTAATCAAGTTACTGACTACTCAAC 57.437 37.037 0.00 0.00 37.72 3.18
208 209 9.516546 TCTCTAATCAAGTTACTGACTACTCAA 57.483 33.333 0.00 0.00 37.72 3.02
209 210 9.516546 TTCTCTAATCAAGTTACTGACTACTCA 57.483 33.333 0.00 0.00 37.72 3.41
212 213 9.909644 TGTTTCTCTAATCAAGTTACTGACTAC 57.090 33.333 0.00 0.00 37.72 2.73
214 215 9.482627 CTTGTTTCTCTAATCAAGTTACTGACT 57.517 33.333 0.00 0.00 41.47 3.41
215 216 9.262358 ACTTGTTTCTCTAATCAAGTTACTGAC 57.738 33.333 8.17 0.00 46.32 3.51
223 224 8.087982 TGCTGTAACTTGTTTCTCTAATCAAG 57.912 34.615 7.17 7.17 43.49 3.02
224 225 7.307989 GCTGCTGTAACTTGTTTCTCTAATCAA 60.308 37.037 0.00 0.00 0.00 2.57
225 226 6.147821 GCTGCTGTAACTTGTTTCTCTAATCA 59.852 38.462 0.00 0.00 0.00 2.57
226 227 6.147821 TGCTGCTGTAACTTGTTTCTCTAATC 59.852 38.462 0.00 0.00 0.00 1.75
227 228 5.997746 TGCTGCTGTAACTTGTTTCTCTAAT 59.002 36.000 0.00 0.00 0.00 1.73
228 229 5.364778 TGCTGCTGTAACTTGTTTCTCTAA 58.635 37.500 0.00 0.00 0.00 2.10
229 230 4.956085 TGCTGCTGTAACTTGTTTCTCTA 58.044 39.130 0.00 0.00 0.00 2.43
230 231 3.808728 TGCTGCTGTAACTTGTTTCTCT 58.191 40.909 0.00 0.00 0.00 3.10
231 232 4.552166 TTGCTGCTGTAACTTGTTTCTC 57.448 40.909 0.00 0.00 0.00 2.87
232 233 4.440112 GGTTTGCTGCTGTAACTTGTTTCT 60.440 41.667 0.00 0.00 0.00 2.52
233 234 3.796717 GGTTTGCTGCTGTAACTTGTTTC 59.203 43.478 0.00 0.00 0.00 2.78
234 235 3.447229 AGGTTTGCTGCTGTAACTTGTTT 59.553 39.130 0.00 0.00 0.00 2.83
235 236 3.023832 AGGTTTGCTGCTGTAACTTGTT 58.976 40.909 0.00 0.00 0.00 2.83
236 237 2.358898 CAGGTTTGCTGCTGTAACTTGT 59.641 45.455 0.00 0.00 0.00 3.16
237 238 2.358898 ACAGGTTTGCTGCTGTAACTTG 59.641 45.455 16.72 16.72 35.67 3.16
238 239 2.654863 ACAGGTTTGCTGCTGTAACTT 58.345 42.857 0.00 0.00 0.00 2.66
239 240 2.348411 ACAGGTTTGCTGCTGTAACT 57.652 45.000 0.00 0.00 0.00 2.24
240 241 3.314080 TGTAACAGGTTTGCTGCTGTAAC 59.686 43.478 0.00 2.97 0.00 2.50
241 242 3.314080 GTGTAACAGGTTTGCTGCTGTAA 59.686 43.478 0.00 0.00 36.32 2.41
242 243 2.875933 GTGTAACAGGTTTGCTGCTGTA 59.124 45.455 0.00 0.00 36.32 2.74
243 244 1.676006 GTGTAACAGGTTTGCTGCTGT 59.324 47.619 0.00 0.00 36.32 4.40
244 245 1.675483 TGTGTAACAGGTTTGCTGCTG 59.325 47.619 0.00 0.00 45.67 4.41
245 246 2.051334 TGTGTAACAGGTTTGCTGCT 57.949 45.000 0.00 0.00 45.67 4.24
265 266 9.950680 CAGCAGGTACATTTTCGAAAATATATT 57.049 29.630 30.14 18.74 36.52 1.28
266 267 9.120538 ACAGCAGGTACATTTTCGAAAATATAT 57.879 29.630 30.14 21.60 36.52 0.86
267 268 8.394877 CACAGCAGGTACATTTTCGAAAATATA 58.605 33.333 30.14 23.10 36.52 0.86
268 269 7.250569 CACAGCAGGTACATTTTCGAAAATAT 58.749 34.615 30.14 24.10 36.52 1.28
269 270 6.607689 CACAGCAGGTACATTTTCGAAAATA 58.392 36.000 30.14 16.85 36.52 1.40
270 271 5.460646 CACAGCAGGTACATTTTCGAAAAT 58.539 37.500 26.51 26.51 39.07 1.82
271 272 4.791411 GCACAGCAGGTACATTTTCGAAAA 60.791 41.667 24.43 24.43 0.00 2.29
272 273 3.304391 GCACAGCAGGTACATTTTCGAAA 60.304 43.478 6.47 6.47 0.00 3.46
273 274 2.225491 GCACAGCAGGTACATTTTCGAA 59.775 45.455 0.00 0.00 0.00 3.71
274 275 1.804151 GCACAGCAGGTACATTTTCGA 59.196 47.619 0.00 0.00 0.00 3.71
275 276 1.535028 TGCACAGCAGGTACATTTTCG 59.465 47.619 0.00 0.00 33.32 3.46
276 277 3.641437 TTGCACAGCAGGTACATTTTC 57.359 42.857 0.00 0.00 40.61 2.29
277 278 4.309099 CAATTGCACAGCAGGTACATTTT 58.691 39.130 0.00 0.00 40.61 1.82
278 279 3.306225 CCAATTGCACAGCAGGTACATTT 60.306 43.478 0.00 0.00 40.61 2.32
279 280 2.231964 CCAATTGCACAGCAGGTACATT 59.768 45.455 0.00 0.00 40.61 2.71
280 281 1.820519 CCAATTGCACAGCAGGTACAT 59.179 47.619 0.00 0.00 40.61 2.29
281 282 1.246649 CCAATTGCACAGCAGGTACA 58.753 50.000 0.00 0.00 40.61 2.90
282 283 0.527565 CCCAATTGCACAGCAGGTAC 59.472 55.000 0.00 0.00 40.61 3.34
283 284 1.250154 GCCCAATTGCACAGCAGGTA 61.250 55.000 0.00 0.00 40.61 3.08
284 285 2.576832 GCCCAATTGCACAGCAGGT 61.577 57.895 0.00 0.00 40.61 4.00
285 286 1.823169 AAGCCCAATTGCACAGCAGG 61.823 55.000 0.00 0.00 40.61 4.85
286 287 0.389426 GAAGCCCAATTGCACAGCAG 60.389 55.000 0.00 0.00 40.61 4.24
287 288 1.667151 GAAGCCCAATTGCACAGCA 59.333 52.632 0.00 0.00 36.47 4.41
288 289 1.079612 GGAAGCCCAATTGCACAGC 60.080 57.895 0.00 0.00 0.00 4.40
289 290 0.680618 TTGGAAGCCCAATTGCACAG 59.319 50.000 0.00 0.00 46.94 3.66
290 291 2.831859 TTGGAAGCCCAATTGCACA 58.168 47.368 0.00 0.00 46.94 4.57
305 306 7.670364 ACTTCAAGTTTTTAGGATCCAATTGG 58.330 34.615 19.08 19.08 0.00 3.16
306 307 8.981647 CAACTTCAAGTTTTTAGGATCCAATTG 58.018 33.333 15.82 8.64 36.03 2.32
307 308 8.150296 CCAACTTCAAGTTTTTAGGATCCAATT 58.850 33.333 15.82 0.00 36.03 2.32
308 309 7.290014 ACCAACTTCAAGTTTTTAGGATCCAAT 59.710 33.333 15.82 0.00 36.03 3.16
309 310 6.609616 ACCAACTTCAAGTTTTTAGGATCCAA 59.390 34.615 15.82 3.42 36.03 3.53
310 311 6.133356 ACCAACTTCAAGTTTTTAGGATCCA 58.867 36.000 15.82 0.00 36.03 3.41
311 312 6.650427 ACCAACTTCAAGTTTTTAGGATCC 57.350 37.500 10.60 2.48 36.03 3.36
312 313 9.063615 TCTTACCAACTTCAAGTTTTTAGGATC 57.936 33.333 10.60 0.00 36.03 3.36
313 314 8.990163 TCTTACCAACTTCAAGTTTTTAGGAT 57.010 30.769 10.60 0.08 36.03 3.24
314 315 8.846211 CATCTTACCAACTTCAAGTTTTTAGGA 58.154 33.333 10.60 6.75 36.03 2.94
315 316 8.846211 TCATCTTACCAACTTCAAGTTTTTAGG 58.154 33.333 0.00 1.23 36.03 2.69
316 317 9.884465 CTCATCTTACCAACTTCAAGTTTTTAG 57.116 33.333 0.00 0.00 36.03 1.85
317 318 9.403583 ACTCATCTTACCAACTTCAAGTTTTTA 57.596 29.630 0.00 0.00 36.03 1.52
318 319 8.293699 ACTCATCTTACCAACTTCAAGTTTTT 57.706 30.769 0.00 0.00 36.03 1.94
319 320 7.881775 ACTCATCTTACCAACTTCAAGTTTT 57.118 32.000 0.00 0.00 36.03 2.43
320 321 7.990886 TGTACTCATCTTACCAACTTCAAGTTT 59.009 33.333 0.00 0.00 36.03 2.66
321 322 7.506114 TGTACTCATCTTACCAACTTCAAGTT 58.494 34.615 0.00 0.00 39.39 2.66
322 323 7.062749 TGTACTCATCTTACCAACTTCAAGT 57.937 36.000 0.00 0.00 0.00 3.16
323 324 7.441157 TGTTGTACTCATCTTACCAACTTCAAG 59.559 37.037 0.00 0.00 0.00 3.02
324 325 7.276658 TGTTGTACTCATCTTACCAACTTCAA 58.723 34.615 0.00 0.00 0.00 2.69
325 326 6.822442 TGTTGTACTCATCTTACCAACTTCA 58.178 36.000 0.00 0.00 0.00 3.02
326 327 7.225931 TGTTGTTGTACTCATCTTACCAACTTC 59.774 37.037 0.00 0.00 32.90 3.01
327 328 7.051623 TGTTGTTGTACTCATCTTACCAACTT 58.948 34.615 0.00 0.00 32.90 2.66
328 329 6.588204 TGTTGTTGTACTCATCTTACCAACT 58.412 36.000 0.00 0.00 32.90 3.16
329 330 6.854496 TGTTGTTGTACTCATCTTACCAAC 57.146 37.500 0.00 0.00 0.00 3.77
330 331 7.867305 TTTGTTGTTGTACTCATCTTACCAA 57.133 32.000 0.00 0.00 0.00 3.67
331 332 8.458573 AATTTGTTGTTGTACTCATCTTACCA 57.541 30.769 0.00 0.00 0.00 3.25
332 333 9.821662 GTAATTTGTTGTTGTACTCATCTTACC 57.178 33.333 0.00 0.00 0.00 2.85
335 336 8.076178 GCTGTAATTTGTTGTTGTACTCATCTT 58.924 33.333 0.00 0.00 0.00 2.40
336 337 7.228507 TGCTGTAATTTGTTGTTGTACTCATCT 59.771 33.333 0.00 0.00 0.00 2.90
337 338 7.359595 TGCTGTAATTTGTTGTTGTACTCATC 58.640 34.615 0.00 0.00 0.00 2.92
338 339 7.270757 TGCTGTAATTTGTTGTTGTACTCAT 57.729 32.000 0.00 0.00 0.00 2.90
339 340 6.685527 TGCTGTAATTTGTTGTTGTACTCA 57.314 33.333 0.00 0.00 0.00 3.41
340 341 5.625311 GCTGCTGTAATTTGTTGTTGTACTC 59.375 40.000 0.00 0.00 0.00 2.59
341 342 5.067153 TGCTGCTGTAATTTGTTGTTGTACT 59.933 36.000 0.00 0.00 0.00 2.73
342 343 5.277825 TGCTGCTGTAATTTGTTGTTGTAC 58.722 37.500 0.00 0.00 0.00 2.90
343 344 5.506686 TGCTGCTGTAATTTGTTGTTGTA 57.493 34.783 0.00 0.00 0.00 2.41
344 345 4.383850 TGCTGCTGTAATTTGTTGTTGT 57.616 36.364 0.00 0.00 0.00 3.32
345 346 5.491973 GTTTGCTGCTGTAATTTGTTGTTG 58.508 37.500 0.00 0.00 0.00 3.33
346 347 4.570369 GGTTTGCTGCTGTAATTTGTTGTT 59.430 37.500 0.00 0.00 0.00 2.83
347 348 4.119136 GGTTTGCTGCTGTAATTTGTTGT 58.881 39.130 0.00 0.00 0.00 3.32
348 349 4.118410 TGGTTTGCTGCTGTAATTTGTTG 58.882 39.130 0.00 0.00 0.00 3.33
349 350 4.370917 CTGGTTTGCTGCTGTAATTTGTT 58.629 39.130 0.00 0.00 0.00 2.83
350 351 3.243839 CCTGGTTTGCTGCTGTAATTTGT 60.244 43.478 0.00 0.00 0.00 2.83
351 352 3.243839 ACCTGGTTTGCTGCTGTAATTTG 60.244 43.478 0.00 0.00 0.00 2.32
352 353 2.965147 ACCTGGTTTGCTGCTGTAATTT 59.035 40.909 0.00 0.00 0.00 1.82
353 354 2.597455 ACCTGGTTTGCTGCTGTAATT 58.403 42.857 0.00 0.00 0.00 1.40
354 355 2.292828 ACCTGGTTTGCTGCTGTAAT 57.707 45.000 0.00 0.00 0.00 1.89
355 356 2.940994 TACCTGGTTTGCTGCTGTAA 57.059 45.000 3.84 0.00 0.00 2.41
356 357 2.882137 GTTTACCTGGTTTGCTGCTGTA 59.118 45.455 3.84 0.00 0.00 2.74
357 358 1.681264 GTTTACCTGGTTTGCTGCTGT 59.319 47.619 3.84 0.00 0.00 4.40
358 359 1.680735 TGTTTACCTGGTTTGCTGCTG 59.319 47.619 3.84 0.00 0.00 4.41
359 360 2.065899 TGTTTACCTGGTTTGCTGCT 57.934 45.000 3.84 0.00 0.00 4.24
360 361 2.545742 CCTTGTTTACCTGGTTTGCTGC 60.546 50.000 3.84 0.00 0.00 5.25
361 362 2.955660 TCCTTGTTTACCTGGTTTGCTG 59.044 45.455 3.84 0.00 0.00 4.41
362 363 3.306472 TCCTTGTTTACCTGGTTTGCT 57.694 42.857 3.84 0.00 0.00 3.91
363 364 3.383505 ACTTCCTTGTTTACCTGGTTTGC 59.616 43.478 3.84 0.00 0.00 3.68
364 365 5.592104 AACTTCCTTGTTTACCTGGTTTG 57.408 39.130 3.84 0.00 0.00 2.93
365 366 6.614694 AAAACTTCCTTGTTTACCTGGTTT 57.385 33.333 3.84 0.00 38.98 3.27
366 367 6.211785 TCAAAAACTTCCTTGTTTACCTGGTT 59.788 34.615 3.84 0.00 38.98 3.67
367 368 5.717654 TCAAAAACTTCCTTGTTTACCTGGT 59.282 36.000 4.05 4.05 38.98 4.00
368 369 6.215495 TCAAAAACTTCCTTGTTTACCTGG 57.785 37.500 0.00 0.00 38.98 4.45
369 370 8.440059 GTTTTCAAAAACTTCCTTGTTTACCTG 58.560 33.333 10.38 0.00 43.68 4.00
370 371 8.151596 TGTTTTCAAAAACTTCCTTGTTTACCT 58.848 29.630 16.77 0.00 46.37 3.08
371 372 8.312896 TGTTTTCAAAAACTTCCTTGTTTACC 57.687 30.769 16.77 0.00 46.37 2.85
374 375 8.941977 GGTATGTTTTCAAAAACTTCCTTGTTT 58.058 29.630 16.77 0.00 46.37 2.83
375 376 8.318412 AGGTATGTTTTCAAAAACTTCCTTGTT 58.682 29.630 16.77 0.00 46.37 2.83
376 377 7.847096 AGGTATGTTTTCAAAAACTTCCTTGT 58.153 30.769 16.77 2.62 46.37 3.16
377 378 9.981114 ATAGGTATGTTTTCAAAAACTTCCTTG 57.019 29.630 21.55 0.00 46.37 3.61
379 380 9.981114 CAATAGGTATGTTTTCAAAAACTTCCT 57.019 29.630 16.77 19.22 46.37 3.36
380 381 9.758651 ACAATAGGTATGTTTTCAAAAACTTCC 57.241 29.630 16.77 14.93 46.37 3.46
382 383 9.040939 GCACAATAGGTATGTTTTCAAAAACTT 57.959 29.630 16.77 13.48 46.37 2.66
383 384 7.655732 GGCACAATAGGTATGTTTTCAAAAACT 59.344 33.333 16.77 7.42 46.37 2.66
384 385 7.439655 TGGCACAATAGGTATGTTTTCAAAAAC 59.560 33.333 10.67 10.67 41.78 2.43
385 386 7.500992 TGGCACAATAGGTATGTTTTCAAAAA 58.499 30.769 0.00 0.00 31.92 1.94
386 387 7.055667 TGGCACAATAGGTATGTTTTCAAAA 57.944 32.000 0.00 0.00 31.92 2.44
387 388 6.656632 TGGCACAATAGGTATGTTTTCAAA 57.343 33.333 0.00 0.00 31.92 2.69
404 405 0.107410 ACTGAAACTCCGTTGGCACA 60.107 50.000 0.00 0.00 0.00 4.57
405 406 1.021968 AACTGAAACTCCGTTGGCAC 58.978 50.000 0.00 0.00 0.00 5.01
406 407 1.021202 CAACTGAAACTCCGTTGGCA 58.979 50.000 3.75 0.00 35.57 4.92
407 408 3.845625 CAACTGAAACTCCGTTGGC 57.154 52.632 3.75 0.00 35.57 4.52
409 410 2.484264 GGATCCAACTGAAACTCCGTTG 59.516 50.000 6.95 4.51 38.14 4.10
410 411 2.372172 AGGATCCAACTGAAACTCCGTT 59.628 45.455 15.82 0.00 0.00 4.44
411 412 1.978580 AGGATCCAACTGAAACTCCGT 59.021 47.619 15.82 0.00 0.00 4.69
412 413 2.350522 CAGGATCCAACTGAAACTCCG 58.649 52.381 15.82 0.00 38.20 4.63
413 414 2.087646 GCAGGATCCAACTGAAACTCC 58.912 52.381 15.82 0.00 38.20 3.85
414 415 2.783135 TGCAGGATCCAACTGAAACTC 58.217 47.619 15.82 0.00 38.20 3.01
415 416 2.957402 TGCAGGATCCAACTGAAACT 57.043 45.000 15.82 0.00 38.20 2.66
416 417 3.319122 AGTTTGCAGGATCCAACTGAAAC 59.681 43.478 15.82 14.05 38.20 2.78
417 418 3.565307 AGTTTGCAGGATCCAACTGAAA 58.435 40.909 15.82 1.14 38.20 2.69
418 419 3.228188 AGTTTGCAGGATCCAACTGAA 57.772 42.857 15.82 0.00 38.20 3.02
419 420 2.886523 CAAGTTTGCAGGATCCAACTGA 59.113 45.455 15.82 0.00 38.20 3.41
420 421 2.886523 TCAAGTTTGCAGGATCCAACTG 59.113 45.455 15.82 4.66 38.95 3.16
421 422 3.228188 TCAAGTTTGCAGGATCCAACT 57.772 42.857 15.82 11.84 0.00 3.16
422 423 4.240096 CATTCAAGTTTGCAGGATCCAAC 58.760 43.478 15.82 9.54 0.00 3.77
423 424 3.896888 ACATTCAAGTTTGCAGGATCCAA 59.103 39.130 15.82 0.00 0.00 3.53
424 425 3.499338 ACATTCAAGTTTGCAGGATCCA 58.501 40.909 15.82 0.00 0.00 3.41
425 426 4.525912 AACATTCAAGTTTGCAGGATCC 57.474 40.909 2.48 2.48 0.00 3.36
426 427 5.098211 GCTAACATTCAAGTTTGCAGGATC 58.902 41.667 8.04 0.00 45.32 3.36
427 428 5.064441 GCTAACATTCAAGTTTGCAGGAT 57.936 39.130 8.04 0.00 45.32 3.24
428 429 4.503741 GCTAACATTCAAGTTTGCAGGA 57.496 40.909 8.04 0.00 45.32 3.86
432 433 6.956299 ATGATTGCTAACATTCAAGTTTGC 57.044 33.333 6.36 6.36 45.90 3.68
475 476 2.271944 AACAAACTAGGGGCACAGAC 57.728 50.000 0.00 0.00 0.00 3.51
491 492 5.249622 TGGGGATGAATGAGTACAACTAACA 59.750 40.000 0.00 0.00 0.00 2.41
527 528 2.519013 GAGTGGGGAAAAGTGAGCAAT 58.481 47.619 0.00 0.00 0.00 3.56
579 586 4.794981 GCATTGACCCGACGACAATATCTA 60.795 45.833 0.00 0.00 33.73 1.98
630 637 1.760875 GGACTCGGCCCTACATGGA 60.761 63.158 0.00 0.00 38.35 3.41
701 711 8.321353 GGTCATCATATGAAACCACTATATGGA 58.679 37.037 25.10 0.00 46.16 3.41
704 714 7.907389 ACGGTCATCATATGAAACCACTATAT 58.093 34.615 27.38 11.72 41.69 0.86
748 758 1.252904 GGTCAGTTGCATGTGCCCAT 61.253 55.000 2.07 0.00 41.18 4.00
754 764 0.884704 GACCACGGTCAGTTGCATGT 60.885 55.000 11.43 0.00 44.02 3.21
805 815 6.927381 CCCCTCTTTATACGATCATACGTTTT 59.073 38.462 0.00 0.00 44.14 2.43
812 822 4.286291 GGTTCCCCCTCTTTATACGATCAT 59.714 45.833 0.00 0.00 0.00 2.45
813 823 3.644738 GGTTCCCCCTCTTTATACGATCA 59.355 47.826 0.00 0.00 0.00 2.92
814 824 3.644738 TGGTTCCCCCTCTTTATACGATC 59.355 47.826 0.00 0.00 0.00 3.69
873 898 1.489481 AGATGATGCGACAGGAAGGA 58.511 50.000 0.00 0.00 0.00 3.36
938 967 2.048784 GCAGAGCGAGACAGTGCA 60.049 61.111 0.00 0.00 34.18 4.57
954 983 1.077429 GAAGAGGATGTGGTGGGGC 60.077 63.158 0.00 0.00 0.00 5.80
1034 1063 1.204941 GCAACTCCACTACATCTCCGT 59.795 52.381 0.00 0.00 0.00 4.69
1173 1202 2.496817 GCCGTCGCCATCTTCTCT 59.503 61.111 0.00 0.00 0.00 3.10
1333 1374 3.947910 TCCAACCAACTACTCTAACCG 57.052 47.619 0.00 0.00 0.00 4.44
1351 1392 1.933307 AAACCCCGACCCATCCATCC 61.933 60.000 0.00 0.00 0.00 3.51
1380 1425 1.078159 GTACAAAAACCCCCATCCCCT 59.922 52.381 0.00 0.00 0.00 4.79
1594 2258 0.958091 TCAAAACCCCAATCTGCGTG 59.042 50.000 0.00 0.00 0.00 5.34
1716 2380 2.064434 TTCCATTGTCCTGCACACAA 57.936 45.000 8.56 8.56 38.12 3.33
1725 2389 5.976458 TCCTATTTGCATTTTCCATTGTCC 58.024 37.500 0.00 0.00 0.00 4.02
2124 2812 6.916387 GTCTTGCGCTTGTAGTAGTAATCATA 59.084 38.462 9.73 0.00 0.00 2.15
2284 2975 1.192146 CCGGGGAGTCAGGACTTTCA 61.192 60.000 3.07 0.00 42.66 2.69
2302 3004 9.722056 GTAATTAAAACACATCATCAGATCACC 57.278 33.333 0.00 0.00 30.20 4.02
2308 3024 9.778993 CCAGAAGTAATTAAAACACATCATCAG 57.221 33.333 0.00 0.00 0.00 2.90
2331 3047 3.925913 CACAAAGTTCACCAAACAACCAG 59.074 43.478 0.00 0.00 40.56 4.00
2365 3081 4.336889 ACCATACCATCCATAGAACACG 57.663 45.455 0.00 0.00 0.00 4.49
2435 3158 9.979578 TCATAGCAGACAAATTTAAAAACACAT 57.020 25.926 0.00 0.00 0.00 3.21
2603 3332 7.208777 TCATTCAAATGTTGCTTTTTGCTCTA 58.791 30.769 2.85 0.00 38.84 2.43
2614 3343 8.296799 TCATTACAACTTCATTCAAATGTTGC 57.703 30.769 0.00 0.00 40.88 4.17
2702 3432 1.168714 GAGACATGCTGGTGGGAAAC 58.831 55.000 0.00 0.00 0.00 2.78
2744 3477 5.039333 GCATTTATGTTGTCCTGCTGAATC 58.961 41.667 0.00 0.00 0.00 2.52
2750 3483 5.921004 TTTTTGCATTTATGTTGTCCTGC 57.079 34.783 0.00 0.00 0.00 4.85
2782 3530 7.238710 ACATAGATAGGTTTCCAAGGTTGTTT 58.761 34.615 0.00 0.00 0.00 2.83
2783 3531 6.790319 ACATAGATAGGTTTCCAAGGTTGTT 58.210 36.000 0.00 0.00 0.00 2.83
2784 3532 6.388619 ACATAGATAGGTTTCCAAGGTTGT 57.611 37.500 0.00 0.00 0.00 3.32
2785 3533 7.176690 ACAAACATAGATAGGTTTCCAAGGTTG 59.823 37.037 0.00 0.00 38.01 3.77
2794 3542 8.375493 TCTCCTACACAAACATAGATAGGTTT 57.625 34.615 0.00 0.00 40.35 3.27
2830 3579 6.023603 ACCTCCTCTAAATCACCTCAAACTA 58.976 40.000 0.00 0.00 0.00 2.24
2832 3581 5.167303 ACCTCCTCTAAATCACCTCAAAC 57.833 43.478 0.00 0.00 0.00 2.93
2985 3736 9.999660 TGAGACTTCGAATCTACACTATATAGT 57.000 33.333 9.71 9.71 36.90 2.12
3111 3870 7.125507 AGTGAATAAGATGGATCTGAACTGAGT 59.874 37.037 0.00 0.00 37.19 3.41
3114 3873 8.396390 CAAAGTGAATAAGATGGATCTGAACTG 58.604 37.037 0.00 0.00 37.19 3.16
3205 3968 2.907892 TCATGGAGTTCAAGGAGAGGT 58.092 47.619 0.00 0.00 0.00 3.85
3221 3984 6.035975 TGAGCTATCACGTACAACATTTCATG 59.964 38.462 0.00 0.00 0.00 3.07
3268 4031 8.960591 CATAAACTTGGTCTATGGTCATTTTCT 58.039 33.333 0.00 0.00 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.