Multiple sequence alignment - TraesCS1A01G096600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G096600 chr1A 100.000 5376 0 0 1 5376 92575355 92569980 0.000000e+00 9928
1 TraesCS1A01G096600 chr1D 95.298 1744 57 16 656 2382 97539463 97537728 0.000000e+00 2743
2 TraesCS1A01G096600 chr1D 95.939 1256 30 9 2539 3784 97537549 97536305 0.000000e+00 2017
3 TraesCS1A01G096600 chr1D 89.011 1092 69 23 3773 4858 97536273 97535227 0.000000e+00 1304
4 TraesCS1A01G096600 chr1D 92.530 656 35 5 1 656 97540215 97539574 0.000000e+00 928
5 TraesCS1A01G096600 chr1B 94.928 1656 39 17 656 2309 155737502 155739114 0.000000e+00 2551
6 TraesCS1A01G096600 chr1B 94.166 1474 62 15 2307 3759 155739421 155740891 0.000000e+00 2224
7 TraesCS1A01G096600 chr1B 88.020 1202 90 28 3781 4969 155740978 155742138 0.000000e+00 1373
8 TraesCS1A01G096600 chr1B 91.411 489 24 10 1 475 155735902 155736386 0.000000e+00 654
9 TraesCS1A01G096600 chr1B 93.529 170 8 3 489 656 155737222 155737390 3.210000e-62 250


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G096600 chr1A 92569980 92575355 5375 True 9928.0 9928 100.0000 1 5376 1 chr1A.!!$R1 5375
1 TraesCS1A01G096600 chr1D 97535227 97540215 4988 True 1748.0 2743 93.1945 1 4858 4 chr1D.!!$R1 4857
2 TraesCS1A01G096600 chr1B 155735902 155742138 6236 False 1410.4 2551 92.4108 1 4969 5 chr1B.!!$F1 4968

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
530 1367 0.036388 TGGATTCAGGGTCGAAGTGC 60.036 55.0 0.00 0.0 0.0 4.40 F
1725 2682 0.035458 AGGCAGACACAAGCAGGTAC 59.965 55.0 0.00 0.0 0.0 3.34 F
2059 3016 1.321474 TTTCTTTGGCCTGCTCTGTG 58.679 50.0 3.32 0.0 0.0 3.66 F
3108 4521 0.908198 ATGGGAGTCTTGAGCTGGAC 59.092 55.0 0.00 0.0 0.0 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2452 3739 2.279173 ACTAAACTTGGAGGAGGGCAT 58.721 47.619 0.00 0.0 0.00 4.40 R
3108 4521 1.068895 TGCAGGTTGAAAGGTGCAATG 59.931 47.619 0.00 0.0 42.79 2.82 R
3789 5312 0.680921 TTCTATGGGCAGCCACAAGC 60.681 55.000 15.19 0.0 44.25 4.01 R
5071 6607 0.170784 TCGCCGATTTAGTACACGCA 59.829 50.000 0.00 0.0 0.00 5.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
81 82 3.565214 TTCCTTGTGCGGCTGGGA 61.565 61.111 0.00 0.74 0.00 4.37
86 87 3.535629 TTGTGCGGCTGGGAGAGTG 62.536 63.158 0.00 0.00 0.00 3.51
106 107 1.142748 CTACAAGAGCTGCCTCCGG 59.857 63.158 0.00 0.00 38.96 5.14
184 186 3.777925 CTTGCCGCGTCGTCTTGG 61.778 66.667 4.92 0.00 0.00 3.61
224 226 3.456365 GCGGCAGAGGAGAGCAGA 61.456 66.667 0.00 0.00 0.00 4.26
227 229 1.516892 GGCAGAGGAGAGCAGACAG 59.483 63.158 0.00 0.00 0.00 3.51
340 344 7.692460 AATCTCAAGCAGTTTGATGATAACA 57.308 32.000 0.00 0.00 44.48 2.41
382 386 7.216494 ACTGAATCGATTTCAATTTTGGGTTT 58.784 30.769 12.81 0.00 43.64 3.27
388 392 5.525378 CGATTTCAATTTTGGGTTTGGTCAA 59.475 36.000 0.00 0.00 0.00 3.18
398 402 2.235891 GGTTTGGTCAAGGTAGGGTTG 58.764 52.381 0.00 0.00 0.00 3.77
467 482 9.616156 TCAGTTTAGGTTCACACAAGTAATTTA 57.384 29.630 0.00 0.00 0.00 1.40
492 1329 4.642885 CCTTTATTTAGGCGTTCCATTCCA 59.357 41.667 0.00 0.00 33.74 3.53
495 1332 2.799126 TTAGGCGTTCCATTCCATGT 57.201 45.000 0.00 0.00 33.74 3.21
524 1361 1.550524 TCAGAGTTGGATTCAGGGTCG 59.449 52.381 0.00 0.00 0.00 4.79
530 1367 0.036388 TGGATTCAGGGTCGAAGTGC 60.036 55.000 0.00 0.00 0.00 4.40
554 1391 1.002142 GTTTAGTTTCACGGCGCCTTT 60.002 47.619 26.68 8.48 0.00 3.11
602 1441 5.316987 AGGGACTGGTAATCTTTTTCACTG 58.683 41.667 0.00 0.00 37.18 3.66
662 1613 7.540400 TCGTTTGATGGCATTAGTTGTTTATTG 59.460 33.333 0.00 0.00 0.00 1.90
664 1615 5.659463 TGATGGCATTAGTTGTTTATTGGC 58.341 37.500 0.00 0.00 32.97 4.52
811 1768 6.494146 TCATATGCAAATTTGGCTGATGGATA 59.506 34.615 19.47 4.24 0.00 2.59
962 1919 6.485313 TGTTATGTTTTCACAGGTCAAGTAGG 59.515 38.462 0.00 0.00 35.94 3.18
1264 2221 4.647853 AGACTATAGCGGTGGTAATGACAA 59.352 41.667 0.00 0.00 0.00 3.18
1626 2583 7.472945 GCTCCTATTGGCTTAGTTGTTCCTATA 60.473 40.741 0.00 0.00 0.00 1.31
1725 2682 0.035458 AGGCAGACACAAGCAGGTAC 59.965 55.000 0.00 0.00 0.00 3.34
1727 2684 1.901650 GCAGACACAAGCAGGTACGC 61.902 60.000 0.00 0.00 0.00 4.42
1920 2877 5.769662 TGCTGATCAGGTAGTTGTTGATTTT 59.230 36.000 23.89 0.00 32.03 1.82
2031 2988 4.133526 AGAATCCTACTATAGGGCTGCA 57.866 45.455 4.43 0.00 46.24 4.41
2059 3016 1.321474 TTTCTTTGGCCTGCTCTGTG 58.679 50.000 3.32 0.00 0.00 3.66
2061 3018 2.974489 CTTTGGCCTGCTCTGTGCG 61.974 63.158 3.32 0.00 46.63 5.34
2080 3037 7.116376 TCTGTGCGAGTTTTCTTATTAGTCAAG 59.884 37.037 0.00 0.00 0.00 3.02
2081 3038 6.704493 TGTGCGAGTTTTCTTATTAGTCAAGT 59.296 34.615 0.00 0.00 0.00 3.16
2082 3039 7.095774 TGTGCGAGTTTTCTTATTAGTCAAGTC 60.096 37.037 0.00 0.00 0.00 3.01
2083 3040 6.926826 TGCGAGTTTTCTTATTAGTCAAGTCA 59.073 34.615 0.00 0.00 0.00 3.41
2084 3041 7.439955 TGCGAGTTTTCTTATTAGTCAAGTCAA 59.560 33.333 0.00 0.00 0.00 3.18
2085 3042 8.443937 GCGAGTTTTCTTATTAGTCAAGTCAAT 58.556 33.333 0.00 0.00 0.00 2.57
2086 3043 9.746711 CGAGTTTTCTTATTAGTCAAGTCAATG 57.253 33.333 0.00 0.00 0.00 2.82
2088 3045 9.793259 AGTTTTCTTATTAGTCAAGTCAATGGA 57.207 29.630 0.00 0.00 0.00 3.41
2267 3245 8.031277 CCTTTTCCCTAATATGATATTGCTTGC 58.969 37.037 7.91 0.00 0.00 4.01
2300 3278 5.525378 GGTTTATATCCTGACAAGCTCTGTG 59.475 44.000 6.31 0.00 38.84 3.66
2305 3283 2.435805 TCCTGACAAGCTCTGTGAAAGT 59.564 45.455 6.31 0.00 38.84 2.66
2309 3596 4.454678 TGACAAGCTCTGTGAAAGTCATT 58.545 39.130 6.31 0.00 38.84 2.57
2355 3642 9.695526 TGATTTAATTATTGGAAGTATGCATGC 57.304 29.630 11.82 11.82 0.00 4.06
2384 3671 8.859090 TCATCATTGATACTTTTGTTTCCTTGT 58.141 29.630 0.00 0.00 30.81 3.16
2427 3714 3.073062 ACCAGCTAAGTGTTGTTCCTGAT 59.927 43.478 0.00 0.00 0.00 2.90
2482 3769 9.163899 CCTCCTCCAAGTTTAGTTATTAGTTTC 57.836 37.037 0.00 0.00 0.00 2.78
2545 3957 3.127589 TGTGACTTTGTGTGGTATGTCG 58.872 45.455 0.00 0.00 0.00 4.35
2766 4179 2.032377 TGACCACGTTCGCTCATTTTTC 60.032 45.455 0.00 0.00 0.00 2.29
2767 4180 2.218603 ACCACGTTCGCTCATTTTTCT 58.781 42.857 0.00 0.00 0.00 2.52
2769 4182 3.810941 ACCACGTTCGCTCATTTTTCTTA 59.189 39.130 0.00 0.00 0.00 2.10
2770 4183 4.454504 ACCACGTTCGCTCATTTTTCTTAT 59.545 37.500 0.00 0.00 0.00 1.73
2880 4293 4.724602 GCAGCACGTCGAGAGGCA 62.725 66.667 0.00 0.00 33.27 4.75
3069 4482 5.812652 GTCACTTTGACCAACGATGTTTTA 58.187 37.500 0.00 0.00 41.37 1.52
3108 4521 0.908198 ATGGGAGTCTTGAGCTGGAC 59.092 55.000 0.00 0.00 0.00 4.02
3141 4554 1.308069 ACCTGCATGCTGCCTTTACG 61.308 55.000 20.33 6.24 44.23 3.18
3464 4885 1.565759 CCAGATTCATTGAGGGACCCA 59.434 52.381 14.60 0.00 0.00 4.51
3538 4959 5.565509 TGTTCAGGTTTGCCTATGAACATA 58.434 37.500 13.84 0.00 46.22 2.29
3621 5046 7.944729 AACACCATAACTTTCTAATGATGCT 57.055 32.000 0.00 0.00 0.00 3.79
3741 5188 7.150640 ACCTGAAGAGAAAAAGAATGATTTGC 58.849 34.615 0.00 0.00 0.00 3.68
3810 5333 0.991146 TTGTGGCTGCCCATAGAAGA 59.009 50.000 17.53 0.00 44.51 2.87
3811 5334 0.253044 TGTGGCTGCCCATAGAAGAC 59.747 55.000 17.53 5.36 44.51 3.01
3848 5371 2.031870 GAGCAAAAACAGGGGACAAGT 58.968 47.619 0.00 0.00 0.00 3.16
3849 5372 1.756538 AGCAAAAACAGGGGACAAGTG 59.243 47.619 0.00 0.00 0.00 3.16
3880 5403 9.110502 GGCTAATAACTTAATGTTAGCAGAAGT 57.889 33.333 15.30 4.43 46.65 3.01
4070 5593 2.247358 TCTGCACATTCCTTTTTCCCC 58.753 47.619 0.00 0.00 0.00 4.81
4117 5640 3.055021 TGACCGATGTCTCTACACTCTCT 60.055 47.826 0.00 0.00 42.28 3.10
4151 5674 1.304381 GTTGGCCTGATGCAAGGGA 60.304 57.895 3.32 0.00 43.89 4.20
4165 5688 0.250513 AAGGGAACATCTGGCTCGAC 59.749 55.000 0.00 0.00 0.00 4.20
4191 5714 3.047695 AGGTGTAGGGAAGGGATGTAG 57.952 52.381 0.00 0.00 0.00 2.74
4296 5822 2.677875 CAAAGGTGCTGGAGGCCC 60.678 66.667 0.00 0.00 40.92 5.80
4312 5838 4.845580 CCCGGCGCTGATGCTCTT 62.846 66.667 20.25 0.00 36.97 2.85
4321 5847 4.109050 GCGCTGATGCTCTTAGTATATCC 58.891 47.826 0.00 0.00 36.97 2.59
4325 5851 6.915300 CGCTGATGCTCTTAGTATATCCATAC 59.085 42.308 0.00 0.00 36.16 2.39
4326 5852 6.915300 GCTGATGCTCTTAGTATATCCATACG 59.085 42.308 0.00 0.00 38.14 3.06
4327 5853 7.201741 GCTGATGCTCTTAGTATATCCATACGA 60.202 40.741 0.00 0.00 38.14 3.43
4330 5856 8.988546 ATGCTCTTAGTATATCCATACGAGAT 57.011 34.615 0.00 0.00 41.70 2.75
4337 5863 5.594725 AGTATATCCATACGAGATGGCGATT 59.405 40.000 14.06 4.51 41.70 3.34
4339 5865 1.960689 TCCATACGAGATGGCGATTCA 59.039 47.619 14.06 0.00 39.01 2.57
4343 5869 1.065764 CGAGATGGCGATTCACGGA 59.934 57.895 0.00 0.00 42.83 4.69
4344 5870 0.319040 CGAGATGGCGATTCACGGAT 60.319 55.000 0.00 0.00 42.83 4.18
4378 5904 1.136774 CCAGTCGATCGCGTGAGAA 59.863 57.895 11.09 0.00 38.98 2.87
4385 5911 1.350193 GATCGCGTGAGAAGCAGAAA 58.650 50.000 5.77 0.00 34.19 2.52
4391 5917 0.161870 GTGAGAAGCAGAAACGTCGC 59.838 55.000 0.00 0.00 0.00 5.19
4393 5919 1.945776 GAGAAGCAGAAACGTCGCCG 61.946 60.000 0.00 0.00 40.83 6.46
4394 5920 2.019951 GAAGCAGAAACGTCGCCGA 61.020 57.895 0.00 0.00 37.88 5.54
4400 5926 3.007070 GAAACGTCGCCGAACGCAT 62.007 57.895 0.00 0.00 46.40 4.73
4424 5950 4.625800 GGGCAAAGCTCGACTGAT 57.374 55.556 0.00 0.00 0.00 2.90
4490 6016 0.804989 CCATTTGAAGAGCGGGTGTC 59.195 55.000 0.00 0.00 0.00 3.67
4491 6017 0.443869 CATTTGAAGAGCGGGTGTCG 59.556 55.000 0.00 0.00 42.76 4.35
4492 6018 0.034896 ATTTGAAGAGCGGGTGTCGT 59.965 50.000 0.00 0.00 41.72 4.34
4493 6019 0.179067 TTTGAAGAGCGGGTGTCGTT 60.179 50.000 0.00 0.00 41.72 3.85
4494 6020 0.675083 TTGAAGAGCGGGTGTCGTTA 59.325 50.000 0.00 0.00 41.72 3.18
4495 6021 0.675083 TGAAGAGCGGGTGTCGTTAA 59.325 50.000 0.00 0.00 41.72 2.01
4496 6022 1.066136 GAAGAGCGGGTGTCGTTAAC 58.934 55.000 0.00 0.00 41.72 2.01
4501 6027 1.489881 GCGGGTGTCGTTAACGTGTT 61.490 55.000 25.98 0.00 41.72 3.32
4502 6028 1.764851 CGGGTGTCGTTAACGTGTTA 58.235 50.000 25.98 5.44 40.80 2.41
4503 6029 2.327568 CGGGTGTCGTTAACGTGTTAT 58.672 47.619 25.98 0.00 40.80 1.89
4504 6030 2.090967 CGGGTGTCGTTAACGTGTTATG 59.909 50.000 25.98 10.90 40.80 1.90
4505 6031 2.159801 GGGTGTCGTTAACGTGTTATGC 60.160 50.000 25.98 11.11 40.80 3.14
4506 6032 2.733026 GGTGTCGTTAACGTGTTATGCT 59.267 45.455 25.98 0.00 40.80 3.79
4507 6033 3.422603 GGTGTCGTTAACGTGTTATGCTG 60.423 47.826 25.98 0.00 40.80 4.41
4508 6034 2.732500 TGTCGTTAACGTGTTATGCTGG 59.267 45.455 25.98 0.00 40.80 4.85
4509 6035 2.733026 GTCGTTAACGTGTTATGCTGGT 59.267 45.455 25.98 0.00 40.80 4.00
4510 6036 2.732500 TCGTTAACGTGTTATGCTGGTG 59.267 45.455 25.98 0.00 40.80 4.17
4511 6037 2.477375 CGTTAACGTGTTATGCTGGTGT 59.523 45.455 19.75 0.00 34.11 4.16
4512 6038 3.674281 CGTTAACGTGTTATGCTGGTGTA 59.326 43.478 19.75 0.00 34.11 2.90
4546 6072 0.890996 CTGAGTTGAGTTGTGGGGGC 60.891 60.000 0.00 0.00 0.00 5.80
4547 6073 1.966451 GAGTTGAGTTGTGGGGGCG 60.966 63.158 0.00 0.00 0.00 6.13
4548 6074 2.112297 GTTGAGTTGTGGGGGCGA 59.888 61.111 0.00 0.00 0.00 5.54
4549 6075 1.303317 GTTGAGTTGTGGGGGCGAT 60.303 57.895 0.00 0.00 0.00 4.58
4550 6076 0.893727 GTTGAGTTGTGGGGGCGATT 60.894 55.000 0.00 0.00 0.00 3.34
4551 6077 0.893270 TTGAGTTGTGGGGGCGATTG 60.893 55.000 0.00 0.00 0.00 2.67
4573 6101 3.630312 GGGTCAGTCTGAGATAGTGACTC 59.370 52.174 16.87 12.18 43.71 3.36
4575 6104 3.311322 GTCAGTCTGAGATAGTGACTCGG 59.689 52.174 1.75 0.00 41.87 4.63
4596 6125 2.354074 CTTATTGGCGGCATGGTGGC 62.354 60.000 14.32 0.00 39.85 5.01
4612 6141 1.004440 GGCGAGGAGAGCAGTGTTT 60.004 57.895 0.00 0.00 36.08 2.83
4613 6142 1.294659 GGCGAGGAGAGCAGTGTTTG 61.295 60.000 0.00 0.00 36.08 2.93
4614 6143 0.601311 GCGAGGAGAGCAGTGTTTGT 60.601 55.000 0.00 0.00 34.19 2.83
4615 6144 1.143305 CGAGGAGAGCAGTGTTTGTG 58.857 55.000 0.00 0.00 0.00 3.33
4616 6145 0.871057 GAGGAGAGCAGTGTTTGTGC 59.129 55.000 0.00 0.00 41.54 4.57
4630 6159 0.399833 TTGTGCTGTGCATGAGGGTA 59.600 50.000 0.00 0.00 41.91 3.69
4656 6185 1.635487 AGGGAGGCAAAAGCTGATACA 59.365 47.619 0.00 0.00 0.00 2.29
4657 6186 2.019984 GGGAGGCAAAAGCTGATACAG 58.980 52.381 0.00 0.00 34.12 2.74
4658 6187 2.619074 GGGAGGCAAAAGCTGATACAGT 60.619 50.000 0.00 0.00 33.43 3.55
4659 6188 3.370527 GGGAGGCAAAAGCTGATACAGTA 60.371 47.826 0.00 0.00 33.43 2.74
4660 6189 3.623510 GGAGGCAAAAGCTGATACAGTAC 59.376 47.826 0.00 0.00 33.43 2.73
4661 6190 4.508662 GAGGCAAAAGCTGATACAGTACT 58.491 43.478 0.00 0.00 33.43 2.73
4662 6191 5.395324 GGAGGCAAAAGCTGATACAGTACTA 60.395 44.000 0.00 0.00 33.43 1.82
4663 6192 5.665459 AGGCAAAAGCTGATACAGTACTAG 58.335 41.667 0.00 0.00 33.43 2.57
4676 6205 9.895138 TGATACAGTACTAGTACATACAGACAA 57.105 33.333 29.87 8.47 38.48 3.18
4708 6237 1.532921 GCGAGATCCTGTGAAGAGTCG 60.533 57.143 0.00 0.00 0.00 4.18
4792 6321 1.518325 TGGCGTGTTTACACAGATGG 58.482 50.000 12.97 0.00 46.75 3.51
4822 6351 1.284408 GCCGGTTGCATTTTCACGA 59.716 52.632 1.90 0.00 40.77 4.35
4823 6352 0.109319 GCCGGTTGCATTTTCACGAT 60.109 50.000 1.90 0.00 40.77 3.73
4858 6390 3.064987 CTAGGGGTCGGTCGTGCAG 62.065 68.421 0.00 0.00 0.00 4.41
4859 6391 3.572447 TAGGGGTCGGTCGTGCAGA 62.572 63.158 0.00 0.00 0.00 4.26
4860 6392 4.436998 GGGGTCGGTCGTGCAGAG 62.437 72.222 0.00 0.00 0.00 3.35
4861 6393 4.436998 GGGTCGGTCGTGCAGAGG 62.437 72.222 0.00 0.00 0.00 3.69
4863 6395 2.711922 GGTCGGTCGTGCAGAGGAT 61.712 63.158 0.00 0.00 0.00 3.24
4864 6396 1.517257 GTCGGTCGTGCAGAGGATG 60.517 63.158 0.00 0.00 0.00 3.51
4865 6397 1.977009 TCGGTCGTGCAGAGGATGT 60.977 57.895 0.00 0.00 0.00 3.06
4866 6398 1.807165 CGGTCGTGCAGAGGATGTG 60.807 63.158 0.00 0.00 0.00 3.21
4900 6436 9.434420 TTTCATTAAATAGTTTTCATTGCCAGG 57.566 29.630 0.00 0.00 0.00 4.45
4908 6444 0.251474 TTCATTGCCAGGAAGCTGCT 60.251 50.000 0.00 0.00 0.00 4.24
4909 6445 0.251474 TCATTGCCAGGAAGCTGCTT 60.251 50.000 15.92 15.92 0.00 3.91
4936 6472 1.605165 TGAAAACCACCCGGCCATC 60.605 57.895 2.24 0.00 34.57 3.51
4944 6480 1.766461 ACCCGGCCATCCTCCTAAG 60.766 63.158 2.24 0.00 0.00 2.18
4945 6481 1.766461 CCCGGCCATCCTCCTAAGT 60.766 63.158 2.24 0.00 0.00 2.24
4994 6530 9.601810 AGGATTTTAACTCCCTAAATTTTGAGT 57.398 29.630 0.00 4.08 39.66 3.41
4999 6535 8.990163 TTAACTCCCTAAATTTTGAGTTCACT 57.010 30.769 22.85 10.57 44.53 3.41
5000 6536 7.511959 AACTCCCTAAATTTTGAGTTCACTC 57.488 36.000 17.69 0.00 42.72 3.51
5001 6537 6.842676 ACTCCCTAAATTTTGAGTTCACTCT 58.157 36.000 8.41 0.00 43.25 3.24
5002 6538 6.937465 ACTCCCTAAATTTTGAGTTCACTCTC 59.063 38.462 8.41 0.00 43.25 3.20
5003 6539 6.837312 TCCCTAAATTTTGAGTTCACTCTCA 58.163 36.000 8.41 0.00 43.25 3.27
5011 6547 5.679734 TTGAGTTCACTCTCAAATTGAGC 57.320 39.130 17.58 3.31 46.88 4.26
5012 6548 4.707105 TGAGTTCACTCTCAAATTGAGCA 58.293 39.130 17.58 5.03 43.95 4.26
5013 6549 5.311265 TGAGTTCACTCTCAAATTGAGCAT 58.689 37.500 17.58 5.65 43.95 3.79
5014 6550 5.766670 TGAGTTCACTCTCAAATTGAGCATT 59.233 36.000 17.58 1.97 43.95 3.56
5015 6551 6.263842 TGAGTTCACTCTCAAATTGAGCATTT 59.736 34.615 17.58 0.00 43.95 2.32
5016 6552 7.047460 AGTTCACTCTCAAATTGAGCATTTT 57.953 32.000 17.58 0.00 43.95 1.82
5017 6553 7.144000 AGTTCACTCTCAAATTGAGCATTTTC 58.856 34.615 17.58 7.33 43.95 2.29
5018 6554 6.889301 TCACTCTCAAATTGAGCATTTTCT 57.111 33.333 17.58 0.00 43.95 2.52
5019 6555 6.675026 TCACTCTCAAATTGAGCATTTTCTG 58.325 36.000 17.58 5.40 43.95 3.02
5048 6584 7.865706 AAAAATACTACTCGCTTCAATCCAT 57.134 32.000 0.00 0.00 0.00 3.41
5049 6585 8.958119 AAAAATACTACTCGCTTCAATCCATA 57.042 30.769 0.00 0.00 0.00 2.74
5050 6586 9.561069 AAAAATACTACTCGCTTCAATCCATAT 57.439 29.630 0.00 0.00 0.00 1.78
5051 6587 9.561069 AAAATACTACTCGCTTCAATCCATATT 57.439 29.630 0.00 0.00 0.00 1.28
5054 6590 9.862371 ATACTACTCGCTTCAATCCATATTAAG 57.138 33.333 0.00 0.00 0.00 1.85
5055 6591 7.727181 ACTACTCGCTTCAATCCATATTAAGT 58.273 34.615 0.00 0.00 0.00 2.24
5056 6592 8.204836 ACTACTCGCTTCAATCCATATTAAGTT 58.795 33.333 0.00 0.00 0.00 2.66
5057 6593 7.251704 ACTCGCTTCAATCCATATTAAGTTG 57.748 36.000 0.00 0.00 0.00 3.16
5058 6594 6.060028 TCGCTTCAATCCATATTAAGTTGC 57.940 37.500 0.00 0.00 0.00 4.17
5059 6595 5.822519 TCGCTTCAATCCATATTAAGTTGCT 59.177 36.000 0.00 0.00 0.00 3.91
5060 6596 6.989759 TCGCTTCAATCCATATTAAGTTGCTA 59.010 34.615 0.00 0.00 0.00 3.49
5061 6597 7.497579 TCGCTTCAATCCATATTAAGTTGCTAA 59.502 33.333 0.00 0.00 0.00 3.09
5062 6598 8.292448 CGCTTCAATCCATATTAAGTTGCTAAT 58.708 33.333 0.00 0.00 0.00 1.73
5063 6599 9.971922 GCTTCAATCCATATTAAGTTGCTAATT 57.028 29.630 0.00 0.00 0.00 1.40
5069 6605 8.404107 TCCATATTAAGTTGCTAATTTAGGGC 57.596 34.615 5.61 0.00 0.00 5.19
5070 6606 8.001875 TCCATATTAAGTTGCTAATTTAGGGCA 58.998 33.333 5.61 0.00 0.00 5.36
5071 6607 8.806146 CCATATTAAGTTGCTAATTTAGGGCAT 58.194 33.333 5.61 0.00 35.84 4.40
5072 6608 9.630098 CATATTAAGTTGCTAATTTAGGGCATG 57.370 33.333 5.61 0.00 35.84 4.06
5073 6609 4.391405 AAGTTGCTAATTTAGGGCATGC 57.609 40.909 9.90 9.90 35.84 4.06
5074 6610 2.358898 AGTTGCTAATTTAGGGCATGCG 59.641 45.455 12.44 0.00 35.84 4.73
5075 6611 2.051334 TGCTAATTTAGGGCATGCGT 57.949 45.000 12.44 3.79 0.00 5.24
5076 6612 1.675483 TGCTAATTTAGGGCATGCGTG 59.325 47.619 12.44 0.09 0.00 5.34
5077 6613 1.676006 GCTAATTTAGGGCATGCGTGT 59.324 47.619 12.44 0.55 0.00 4.49
5078 6614 2.875933 GCTAATTTAGGGCATGCGTGTA 59.124 45.455 12.44 0.00 0.00 2.90
5079 6615 3.303791 GCTAATTTAGGGCATGCGTGTAC 60.304 47.826 12.44 0.91 0.00 2.90
5080 6616 2.710096 ATTTAGGGCATGCGTGTACT 57.290 45.000 12.44 8.59 0.00 2.73
5081 6617 3.830744 ATTTAGGGCATGCGTGTACTA 57.169 42.857 12.44 7.61 0.00 1.82
5082 6618 3.613494 TTTAGGGCATGCGTGTACTAA 57.387 42.857 12.44 15.78 0.00 2.24
5083 6619 3.613494 TTAGGGCATGCGTGTACTAAA 57.387 42.857 12.44 0.00 0.00 1.85
5084 6620 2.710096 AGGGCATGCGTGTACTAAAT 57.290 45.000 12.44 0.00 0.00 1.40
5085 6621 2.561569 AGGGCATGCGTGTACTAAATC 58.438 47.619 12.44 0.00 0.00 2.17
5086 6622 1.260561 GGGCATGCGTGTACTAAATCG 59.739 52.381 12.44 0.00 0.00 3.34
5087 6623 1.260561 GGCATGCGTGTACTAAATCGG 59.739 52.381 12.44 0.00 0.00 4.18
5088 6624 1.332904 GCATGCGTGTACTAAATCGGC 60.333 52.381 0.00 0.00 0.00 5.54
5089 6625 1.071502 CATGCGTGTACTAAATCGGCG 60.072 52.381 0.00 0.00 0.00 6.46
5090 6626 0.170784 TGCGTGTACTAAATCGGCGA 59.829 50.000 13.87 13.87 0.00 5.54
5091 6627 0.569349 GCGTGTACTAAATCGGCGAC 59.431 55.000 13.76 0.00 0.00 5.19
5092 6628 1.898938 CGTGTACTAAATCGGCGACA 58.101 50.000 13.76 0.41 0.00 4.35
5093 6629 2.456989 CGTGTACTAAATCGGCGACAT 58.543 47.619 13.76 6.62 0.00 3.06
5094 6630 2.855963 CGTGTACTAAATCGGCGACATT 59.144 45.455 13.76 13.49 0.00 2.71
5095 6631 4.037021 CGTGTACTAAATCGGCGACATTA 58.963 43.478 13.76 13.94 0.00 1.90
5096 6632 4.500117 CGTGTACTAAATCGGCGACATTAA 59.500 41.667 13.76 0.00 0.00 1.40
5097 6633 5.174398 CGTGTACTAAATCGGCGACATTAAT 59.826 40.000 13.76 7.61 0.00 1.40
5098 6634 6.360414 CGTGTACTAAATCGGCGACATTAATA 59.640 38.462 13.76 6.55 0.00 0.98
5099 6635 7.061441 CGTGTACTAAATCGGCGACATTAATAT 59.939 37.037 13.76 6.23 0.00 1.28
5100 6636 8.160342 GTGTACTAAATCGGCGACATTAATATG 58.840 37.037 13.76 5.81 37.79 1.78
5101 6637 6.721571 ACTAAATCGGCGACATTAATATGG 57.278 37.500 13.76 5.46 36.01 2.74
5102 6638 6.460781 ACTAAATCGGCGACATTAATATGGA 58.539 36.000 13.76 0.00 36.01 3.41
5103 6639 7.103641 ACTAAATCGGCGACATTAATATGGAT 58.896 34.615 13.76 0.00 36.01 3.41
5104 6640 6.817765 AAATCGGCGACATTAATATGGATT 57.182 33.333 13.76 0.00 36.01 3.01
5105 6641 5.801350 ATCGGCGACATTAATATGGATTG 57.199 39.130 13.76 0.00 36.01 2.67
5106 6642 4.000325 TCGGCGACATTAATATGGATTGG 59.000 43.478 4.99 0.00 36.01 3.16
5107 6643 4.000325 CGGCGACATTAATATGGATTGGA 59.000 43.478 0.00 0.00 36.01 3.53
5108 6644 4.093408 CGGCGACATTAATATGGATTGGAG 59.907 45.833 0.00 0.00 36.01 3.86
5109 6645 5.003804 GGCGACATTAATATGGATTGGAGT 58.996 41.667 0.00 0.00 36.01 3.85
5110 6646 5.106555 GGCGACATTAATATGGATTGGAGTG 60.107 44.000 0.00 0.00 36.01 3.51
5111 6647 5.700832 GCGACATTAATATGGATTGGAGTGA 59.299 40.000 0.00 0.00 36.01 3.41
5112 6648 6.128445 GCGACATTAATATGGATTGGAGTGAG 60.128 42.308 0.00 0.00 36.01 3.51
5113 6649 6.931281 CGACATTAATATGGATTGGAGTGAGT 59.069 38.462 0.00 0.00 36.01 3.41
5114 6650 7.095481 CGACATTAATATGGATTGGAGTGAGTG 60.095 40.741 0.00 0.00 36.01 3.51
5115 6651 7.000472 ACATTAATATGGATTGGAGTGAGTGG 59.000 38.462 0.00 0.00 36.01 4.00
5116 6652 6.575244 TTAATATGGATTGGAGTGAGTGGT 57.425 37.500 0.00 0.00 0.00 4.16
5117 6653 7.684317 TTAATATGGATTGGAGTGAGTGGTA 57.316 36.000 0.00 0.00 0.00 3.25
5118 6654 6.770286 AATATGGATTGGAGTGAGTGGTAT 57.230 37.500 0.00 0.00 0.00 2.73
5119 6655 7.872061 AATATGGATTGGAGTGAGTGGTATA 57.128 36.000 0.00 0.00 0.00 1.47
5120 6656 8.454859 AATATGGATTGGAGTGAGTGGTATAT 57.545 34.615 0.00 0.00 0.00 0.86
5121 6657 6.770286 ATGGATTGGAGTGAGTGGTATATT 57.230 37.500 0.00 0.00 0.00 1.28
5122 6658 6.575244 TGGATTGGAGTGAGTGGTATATTT 57.425 37.500 0.00 0.00 0.00 1.40
5123 6659 6.969043 TGGATTGGAGTGAGTGGTATATTTT 58.031 36.000 0.00 0.00 0.00 1.82
5124 6660 7.410174 TGGATTGGAGTGAGTGGTATATTTTT 58.590 34.615 0.00 0.00 0.00 1.94
5145 6681 7.504924 TTTTTAGGGTGTTGACATCACTTAG 57.495 36.000 14.66 0.00 36.25 2.18
5146 6682 3.059352 AGGGTGTTGACATCACTTAGC 57.941 47.619 14.66 0.68 36.25 3.09
5147 6683 2.084546 GGGTGTTGACATCACTTAGCC 58.915 52.381 14.66 5.54 36.25 3.93
5148 6684 2.084546 GGTGTTGACATCACTTAGCCC 58.915 52.381 14.66 0.00 36.25 5.19
5149 6685 2.290323 GGTGTTGACATCACTTAGCCCT 60.290 50.000 14.66 0.00 36.25 5.19
5150 6686 3.412386 GTGTTGACATCACTTAGCCCTT 58.588 45.455 9.04 0.00 33.59 3.95
5151 6687 3.437049 GTGTTGACATCACTTAGCCCTTC 59.563 47.826 9.04 0.00 33.59 3.46
5152 6688 3.010420 GTTGACATCACTTAGCCCTTCC 58.990 50.000 0.00 0.00 0.00 3.46
5153 6689 2.265367 TGACATCACTTAGCCCTTCCA 58.735 47.619 0.00 0.00 0.00 3.53
5154 6690 2.027192 TGACATCACTTAGCCCTTCCAC 60.027 50.000 0.00 0.00 0.00 4.02
5155 6691 2.237392 GACATCACTTAGCCCTTCCACT 59.763 50.000 0.00 0.00 0.00 4.00
5156 6692 3.450904 ACATCACTTAGCCCTTCCACTA 58.549 45.455 0.00 0.00 0.00 2.74
5157 6693 4.040755 ACATCACTTAGCCCTTCCACTAT 58.959 43.478 0.00 0.00 0.00 2.12
5158 6694 4.475016 ACATCACTTAGCCCTTCCACTATT 59.525 41.667 0.00 0.00 0.00 1.73
5159 6695 4.755266 TCACTTAGCCCTTCCACTATTC 57.245 45.455 0.00 0.00 0.00 1.75
5160 6696 4.362677 TCACTTAGCCCTTCCACTATTCT 58.637 43.478 0.00 0.00 0.00 2.40
5161 6697 4.162320 TCACTTAGCCCTTCCACTATTCTG 59.838 45.833 0.00 0.00 0.00 3.02
5162 6698 3.118223 ACTTAGCCCTTCCACTATTCTGC 60.118 47.826 0.00 0.00 0.00 4.26
5163 6699 1.589414 AGCCCTTCCACTATTCTGCT 58.411 50.000 0.00 0.00 0.00 4.24
5164 6700 1.211457 AGCCCTTCCACTATTCTGCTG 59.789 52.381 0.00 0.00 0.00 4.41
5165 6701 1.673168 CCCTTCCACTATTCTGCTGC 58.327 55.000 0.00 0.00 0.00 5.25
5166 6702 1.673168 CCTTCCACTATTCTGCTGCC 58.327 55.000 0.00 0.00 0.00 4.85
5167 6703 1.673168 CTTCCACTATTCTGCTGCCC 58.327 55.000 0.00 0.00 0.00 5.36
5168 6704 0.991146 TTCCACTATTCTGCTGCCCA 59.009 50.000 0.00 0.00 0.00 5.36
5169 6705 0.991146 TCCACTATTCTGCTGCCCAA 59.009 50.000 0.00 0.00 0.00 4.12
5170 6706 1.354031 TCCACTATTCTGCTGCCCAAA 59.646 47.619 0.00 0.00 0.00 3.28
5171 6707 1.747355 CCACTATTCTGCTGCCCAAAG 59.253 52.381 0.00 0.00 0.00 2.77
5172 6708 2.618816 CCACTATTCTGCTGCCCAAAGA 60.619 50.000 0.00 0.00 0.00 2.52
5173 6709 2.681848 CACTATTCTGCTGCCCAAAGAG 59.318 50.000 0.00 0.00 0.00 2.85
5174 6710 1.674962 CTATTCTGCTGCCCAAAGAGC 59.325 52.381 0.00 0.00 35.65 4.09
5175 6711 0.251474 ATTCTGCTGCCCAAAGAGCA 60.251 50.000 0.00 0.00 42.94 4.26
5176 6712 0.467844 TTCTGCTGCCCAAAGAGCAA 60.468 50.000 0.00 0.00 44.44 3.91
5177 6713 0.467844 TCTGCTGCCCAAAGAGCAAA 60.468 50.000 0.00 0.00 44.44 3.68
5178 6714 0.390124 CTGCTGCCCAAAGAGCAAAA 59.610 50.000 0.00 0.00 44.44 2.44
5179 6715 1.001633 CTGCTGCCCAAAGAGCAAAAT 59.998 47.619 0.00 0.00 44.44 1.82
5180 6716 1.417145 TGCTGCCCAAAGAGCAAAATT 59.583 42.857 0.00 0.00 42.22 1.82
5181 6717 2.158784 TGCTGCCCAAAGAGCAAAATTT 60.159 40.909 0.00 0.00 42.22 1.82
5182 6718 2.880268 GCTGCCCAAAGAGCAAAATTTT 59.120 40.909 0.00 0.00 40.35 1.82
5183 6719 3.304190 GCTGCCCAAAGAGCAAAATTTTG 60.304 43.478 23.74 23.74 40.35 2.44
5184 6720 3.212685 TGCCCAAAGAGCAAAATTTTGG 58.787 40.909 27.60 13.19 46.57 3.28
5185 6721 2.030893 GCCCAAAGAGCAAAATTTTGGC 60.031 45.455 27.60 20.28 45.97 4.52
5186 6722 2.223845 CCCAAAGAGCAAAATTTTGGCG 59.776 45.455 27.60 7.59 45.97 5.69
5187 6723 2.349722 CCAAAGAGCAAAATTTTGGCGC 60.350 45.455 27.60 20.99 42.88 6.53
5188 6724 1.511850 AAGAGCAAAATTTTGGCGCC 58.488 45.000 27.60 22.73 38.57 6.53
5189 6725 0.681175 AGAGCAAAATTTTGGCGCCT 59.319 45.000 29.70 17.77 38.57 5.52
5190 6726 1.892474 AGAGCAAAATTTTGGCGCCTA 59.108 42.857 29.70 19.10 38.57 3.93
5191 6727 2.094545 AGAGCAAAATTTTGGCGCCTAG 60.095 45.455 29.70 8.15 38.57 3.02
5192 6728 1.892474 AGCAAAATTTTGGCGCCTAGA 59.108 42.857 29.70 16.75 38.57 2.43
5193 6729 1.992667 GCAAAATTTTGGCGCCTAGAC 59.007 47.619 29.70 8.04 38.57 2.59
5194 6730 2.609244 GCAAAATTTTGGCGCCTAGACA 60.609 45.455 29.70 2.88 38.57 3.41
5195 6731 3.848726 CAAAATTTTGGCGCCTAGACAT 58.151 40.909 29.70 10.56 37.96 3.06
5196 6732 4.244862 CAAAATTTTGGCGCCTAGACATT 58.755 39.130 29.70 15.82 37.96 2.71
5197 6733 4.535526 AAATTTTGGCGCCTAGACATTT 57.464 36.364 29.70 20.25 37.96 2.32
5198 6734 3.782889 ATTTTGGCGCCTAGACATTTC 57.217 42.857 29.70 0.00 37.96 2.17
5199 6735 1.459450 TTTGGCGCCTAGACATTTCC 58.541 50.000 29.70 0.00 37.96 3.13
5200 6736 0.393808 TTGGCGCCTAGACATTTCCC 60.394 55.000 29.70 0.00 37.96 3.97
5201 6737 1.223487 GGCGCCTAGACATTTCCCA 59.777 57.895 22.15 0.00 0.00 4.37
5202 6738 1.095807 GGCGCCTAGACATTTCCCAC 61.096 60.000 22.15 0.00 0.00 4.61
5203 6739 0.107654 GCGCCTAGACATTTCCCACT 60.108 55.000 0.00 0.00 0.00 4.00
5204 6740 1.941325 CGCCTAGACATTTCCCACTC 58.059 55.000 0.00 0.00 0.00 3.51
5205 6741 1.207089 CGCCTAGACATTTCCCACTCA 59.793 52.381 0.00 0.00 0.00 3.41
5206 6742 2.354704 CGCCTAGACATTTCCCACTCAA 60.355 50.000 0.00 0.00 0.00 3.02
5207 6743 3.010420 GCCTAGACATTTCCCACTCAAC 58.990 50.000 0.00 0.00 0.00 3.18
5208 6744 3.610911 CCTAGACATTTCCCACTCAACC 58.389 50.000 0.00 0.00 0.00 3.77
5209 6745 2.185004 AGACATTTCCCACTCAACCG 57.815 50.000 0.00 0.00 0.00 4.44
5210 6746 0.521735 GACATTTCCCACTCAACCGC 59.478 55.000 0.00 0.00 0.00 5.68
5211 6747 0.893727 ACATTTCCCACTCAACCGCC 60.894 55.000 0.00 0.00 0.00 6.13
5212 6748 0.609131 CATTTCCCACTCAACCGCCT 60.609 55.000 0.00 0.00 0.00 5.52
5213 6749 0.322546 ATTTCCCACTCAACCGCCTC 60.323 55.000 0.00 0.00 0.00 4.70
5214 6750 2.406002 TTTCCCACTCAACCGCCTCC 62.406 60.000 0.00 0.00 0.00 4.30
5215 6751 3.636231 CCCACTCAACCGCCTCCA 61.636 66.667 0.00 0.00 0.00 3.86
5216 6752 2.046892 CCACTCAACCGCCTCCAG 60.047 66.667 0.00 0.00 0.00 3.86
5217 6753 2.743718 CACTCAACCGCCTCCAGT 59.256 61.111 0.00 0.00 0.00 4.00
5218 6754 1.071471 CACTCAACCGCCTCCAGTT 59.929 57.895 0.00 0.00 0.00 3.16
5219 6755 1.071471 ACTCAACCGCCTCCAGTTG 59.929 57.895 0.00 0.00 43.78 3.16
5220 6756 2.281484 TCAACCGCCTCCAGTTGC 60.281 61.111 0.00 0.00 42.46 4.17
5221 6757 3.365265 CAACCGCCTCCAGTTGCC 61.365 66.667 0.00 0.00 37.19 4.52
5231 6767 3.434319 CAGTTGCCGCCGCTCAAT 61.434 61.111 0.00 0.00 35.36 2.57
5232 6768 3.434319 AGTTGCCGCCGCTCAATG 61.434 61.111 0.00 0.00 35.36 2.82
5233 6769 3.737172 GTTGCCGCCGCTCAATGT 61.737 61.111 0.00 0.00 35.36 2.71
5234 6770 2.983030 TTGCCGCCGCTCAATGTT 60.983 55.556 0.00 0.00 35.36 2.71
5235 6771 2.976840 TTGCCGCCGCTCAATGTTC 61.977 57.895 0.00 0.00 35.36 3.18
5236 6772 3.430862 GCCGCCGCTCAATGTTCA 61.431 61.111 0.00 0.00 0.00 3.18
5237 6773 2.480555 CCGCCGCTCAATGTTCAC 59.519 61.111 0.00 0.00 0.00 3.18
5238 6774 2.034879 CCGCCGCTCAATGTTCACT 61.035 57.895 0.00 0.00 0.00 3.41
5239 6775 1.421485 CGCCGCTCAATGTTCACTC 59.579 57.895 0.00 0.00 0.00 3.51
5240 6776 1.016130 CGCCGCTCAATGTTCACTCT 61.016 55.000 0.00 0.00 0.00 3.24
5241 6777 0.723981 GCCGCTCAATGTTCACTCTC 59.276 55.000 0.00 0.00 0.00 3.20
5242 6778 1.363744 CCGCTCAATGTTCACTCTCC 58.636 55.000 0.00 0.00 0.00 3.71
5243 6779 1.363744 CGCTCAATGTTCACTCTCCC 58.636 55.000 0.00 0.00 0.00 4.30
5244 6780 1.066573 CGCTCAATGTTCACTCTCCCT 60.067 52.381 0.00 0.00 0.00 4.20
5245 6781 2.626840 GCTCAATGTTCACTCTCCCTC 58.373 52.381 0.00 0.00 0.00 4.30
5246 6782 2.679349 GCTCAATGTTCACTCTCCCTCC 60.679 54.545 0.00 0.00 0.00 4.30
5247 6783 1.909302 TCAATGTTCACTCTCCCTCCC 59.091 52.381 0.00 0.00 0.00 4.30
5248 6784 1.065126 CAATGTTCACTCTCCCTCCCC 60.065 57.143 0.00 0.00 0.00 4.81
5249 6785 0.621862 ATGTTCACTCTCCCTCCCCC 60.622 60.000 0.00 0.00 0.00 5.40
5270 6806 4.225497 CCCCCAGCTTCGATGTTC 57.775 61.111 0.00 0.00 0.00 3.18
5271 6807 1.299648 CCCCCAGCTTCGATGTTCA 59.700 57.895 0.00 0.00 0.00 3.18
5272 6808 0.322456 CCCCCAGCTTCGATGTTCAA 60.322 55.000 0.00 0.00 0.00 2.69
5273 6809 1.683011 CCCCCAGCTTCGATGTTCAAT 60.683 52.381 0.00 0.00 0.00 2.57
5274 6810 2.094675 CCCCAGCTTCGATGTTCAATT 58.905 47.619 0.00 0.00 0.00 2.32
5275 6811 3.278574 CCCCAGCTTCGATGTTCAATTA 58.721 45.455 0.00 0.00 0.00 1.40
5276 6812 3.885297 CCCCAGCTTCGATGTTCAATTAT 59.115 43.478 0.00 0.00 0.00 1.28
5277 6813 5.063204 CCCCAGCTTCGATGTTCAATTATA 58.937 41.667 0.00 0.00 0.00 0.98
5278 6814 5.180117 CCCCAGCTTCGATGTTCAATTATAG 59.820 44.000 0.00 0.00 0.00 1.31
5279 6815 5.180117 CCCAGCTTCGATGTTCAATTATAGG 59.820 44.000 0.00 0.00 0.00 2.57
5280 6816 5.760253 CCAGCTTCGATGTTCAATTATAGGT 59.240 40.000 0.00 0.00 0.00 3.08
5281 6817 6.293081 CCAGCTTCGATGTTCAATTATAGGTG 60.293 42.308 0.00 0.00 0.00 4.00
5282 6818 6.479990 CAGCTTCGATGTTCAATTATAGGTGA 59.520 38.462 0.00 0.00 32.12 4.02
5283 6819 7.172190 CAGCTTCGATGTTCAATTATAGGTGAT 59.828 37.037 0.00 0.00 32.12 3.06
5284 6820 7.172190 AGCTTCGATGTTCAATTATAGGTGATG 59.828 37.037 0.00 0.00 0.00 3.07
5285 6821 7.171508 GCTTCGATGTTCAATTATAGGTGATGA 59.828 37.037 0.00 0.00 0.00 2.92
5286 6822 8.593492 TTCGATGTTCAATTATAGGTGATGAG 57.407 34.615 0.00 0.00 0.00 2.90
5287 6823 7.951591 TCGATGTTCAATTATAGGTGATGAGA 58.048 34.615 0.00 0.00 0.00 3.27
5288 6824 8.588472 TCGATGTTCAATTATAGGTGATGAGAT 58.412 33.333 0.00 0.00 0.00 2.75
5289 6825 9.212641 CGATGTTCAATTATAGGTGATGAGATT 57.787 33.333 0.00 0.00 0.00 2.40
5292 6828 9.045223 TGTTCAATTATAGGTGATGAGATTTCG 57.955 33.333 0.00 0.00 0.00 3.46
5293 6829 7.658179 TCAATTATAGGTGATGAGATTTCGC 57.342 36.000 0.00 0.00 0.00 4.70
5294 6830 7.216494 TCAATTATAGGTGATGAGATTTCGCA 58.784 34.615 0.00 0.00 0.00 5.10
5295 6831 7.171508 TCAATTATAGGTGATGAGATTTCGCAC 59.828 37.037 0.00 0.00 33.19 5.34
5296 6832 1.645034 AGGTGATGAGATTTCGCACG 58.355 50.000 0.00 0.00 34.14 5.34
5297 6833 1.066858 AGGTGATGAGATTTCGCACGT 60.067 47.619 0.00 0.00 34.14 4.49
5298 6834 1.324736 GGTGATGAGATTTCGCACGTC 59.675 52.381 0.00 0.00 34.14 4.34
5299 6835 2.263077 GTGATGAGATTTCGCACGTCT 58.737 47.619 0.00 0.00 0.00 4.18
5300 6836 2.280183 GTGATGAGATTTCGCACGTCTC 59.720 50.000 0.00 3.07 39.02 3.36
5301 6837 2.164422 TGATGAGATTTCGCACGTCTCT 59.836 45.455 9.60 2.35 39.24 3.10
5302 6838 3.377172 TGATGAGATTTCGCACGTCTCTA 59.623 43.478 9.60 0.00 39.24 2.43
5303 6839 4.036852 TGATGAGATTTCGCACGTCTCTAT 59.963 41.667 9.60 3.65 39.24 1.98
5304 6840 4.371855 TGAGATTTCGCACGTCTCTATT 57.628 40.909 9.60 0.00 39.24 1.73
5305 6841 4.105486 TGAGATTTCGCACGTCTCTATTG 58.895 43.478 9.60 0.00 39.24 1.90
5306 6842 4.106197 GAGATTTCGCACGTCTCTATTGT 58.894 43.478 0.00 0.00 36.36 2.71
5307 6843 5.163693 TGAGATTTCGCACGTCTCTATTGTA 60.164 40.000 9.60 0.00 39.24 2.41
5308 6844 5.274718 AGATTTCGCACGTCTCTATTGTAG 58.725 41.667 0.00 0.00 0.00 2.74
5309 6845 4.430137 TTTCGCACGTCTCTATTGTAGT 57.570 40.909 0.00 0.00 0.00 2.73
5310 6846 3.400505 TCGCACGTCTCTATTGTAGTG 57.599 47.619 0.00 0.00 0.00 2.74
5311 6847 2.096980 TCGCACGTCTCTATTGTAGTGG 59.903 50.000 0.00 0.00 0.00 4.00
5312 6848 2.794981 CGCACGTCTCTATTGTAGTGGG 60.795 54.545 0.00 0.00 36.51 4.61
5313 6849 2.481449 GCACGTCTCTATTGTAGTGGGG 60.481 54.545 0.00 0.00 0.00 4.96
5314 6850 3.021695 CACGTCTCTATTGTAGTGGGGA 58.978 50.000 0.00 0.00 0.00 4.81
5315 6851 3.446161 CACGTCTCTATTGTAGTGGGGAA 59.554 47.826 0.00 0.00 0.00 3.97
5316 6852 3.446516 ACGTCTCTATTGTAGTGGGGAAC 59.553 47.826 0.00 0.00 0.00 3.62
5328 6864 4.012138 GGGAACCGAACCCAATGG 57.988 61.111 0.00 0.00 46.05 3.16
5329 6865 2.348104 GGGAACCGAACCCAATGGC 61.348 63.158 0.00 0.00 46.05 4.40
5330 6866 1.304134 GGAACCGAACCCAATGGCT 60.304 57.895 0.00 0.00 33.59 4.75
5331 6867 0.898326 GGAACCGAACCCAATGGCTT 60.898 55.000 0.00 0.00 33.59 4.35
5332 6868 0.243636 GAACCGAACCCAATGGCTTG 59.756 55.000 0.00 0.00 33.59 4.01
5333 6869 0.469144 AACCGAACCCAATGGCTTGT 60.469 50.000 0.00 0.00 33.59 3.16
5334 6870 1.178534 ACCGAACCCAATGGCTTGTG 61.179 55.000 0.00 0.00 33.59 3.33
5335 6871 1.586028 CGAACCCAATGGCTTGTGG 59.414 57.895 0.00 0.00 33.59 4.17
5345 6881 4.102113 GCTTGTGGGCCTTCATGT 57.898 55.556 4.53 0.00 0.00 3.21
5346 6882 1.885871 GCTTGTGGGCCTTCATGTC 59.114 57.895 4.53 0.65 0.00 3.06
5347 6883 0.895100 GCTTGTGGGCCTTCATGTCA 60.895 55.000 4.53 0.00 0.00 3.58
5348 6884 1.619654 CTTGTGGGCCTTCATGTCAA 58.380 50.000 4.53 0.00 0.00 3.18
5349 6885 1.270550 CTTGTGGGCCTTCATGTCAAC 59.729 52.381 4.53 0.00 0.00 3.18
5350 6886 0.888736 TGTGGGCCTTCATGTCAACG 60.889 55.000 4.53 0.00 0.00 4.10
5351 6887 0.889186 GTGGGCCTTCATGTCAACGT 60.889 55.000 4.53 0.00 0.00 3.99
5352 6888 0.179004 TGGGCCTTCATGTCAACGTT 60.179 50.000 4.53 0.00 0.00 3.99
5353 6889 0.240945 GGGCCTTCATGTCAACGTTG 59.759 55.000 22.35 22.35 0.00 4.10
5354 6890 0.240945 GGCCTTCATGTCAACGTTGG 59.759 55.000 27.02 11.83 0.00 3.77
5355 6891 1.234821 GCCTTCATGTCAACGTTGGA 58.765 50.000 27.02 13.99 0.00 3.53
5356 6892 1.812571 GCCTTCATGTCAACGTTGGAT 59.187 47.619 27.02 16.53 0.00 3.41
5357 6893 2.414559 GCCTTCATGTCAACGTTGGATG 60.415 50.000 27.02 25.30 0.00 3.51
5358 6894 3.073678 CCTTCATGTCAACGTTGGATGA 58.926 45.455 26.70 26.70 0.00 2.92
5359 6895 3.691118 CCTTCATGTCAACGTTGGATGAT 59.309 43.478 28.93 15.90 31.83 2.45
5360 6896 4.156556 CCTTCATGTCAACGTTGGATGATT 59.843 41.667 28.93 11.04 31.83 2.57
5361 6897 4.944962 TCATGTCAACGTTGGATGATTC 57.055 40.909 26.70 13.06 0.00 2.52
5362 6898 4.322567 TCATGTCAACGTTGGATGATTCA 58.677 39.130 26.70 16.62 0.00 2.57
5363 6899 4.759183 TCATGTCAACGTTGGATGATTCAA 59.241 37.500 26.70 13.61 0.00 2.69
5364 6900 5.240403 TCATGTCAACGTTGGATGATTCAAA 59.760 36.000 26.70 13.12 0.00 2.69
5365 6901 5.506686 TGTCAACGTTGGATGATTCAAAA 57.493 34.783 27.02 1.02 0.00 2.44
5366 6902 5.277825 TGTCAACGTTGGATGATTCAAAAC 58.722 37.500 27.02 13.73 0.00 2.43
5367 6903 5.163612 TGTCAACGTTGGATGATTCAAAACA 60.164 36.000 27.02 16.02 0.00 2.83
5368 6904 5.173131 GTCAACGTTGGATGATTCAAAACAC 59.827 40.000 27.02 9.52 0.00 3.32
5369 6905 4.909696 ACGTTGGATGATTCAAAACACA 57.090 36.364 0.00 0.00 0.00 3.72
5370 6906 5.452078 ACGTTGGATGATTCAAAACACAT 57.548 34.783 0.00 0.00 0.00 3.21
5371 6907 5.841810 ACGTTGGATGATTCAAAACACATT 58.158 33.333 0.00 0.00 0.00 2.71
5372 6908 6.976088 ACGTTGGATGATTCAAAACACATTA 58.024 32.000 0.00 0.00 0.00 1.90
5373 6909 7.601856 ACGTTGGATGATTCAAAACACATTAT 58.398 30.769 0.00 0.00 0.00 1.28
5374 6910 8.735315 ACGTTGGATGATTCAAAACACATTATA 58.265 29.630 0.00 0.00 0.00 0.98
5375 6911 9.566530 CGTTGGATGATTCAAAACACATTATAA 57.433 29.630 0.00 0.00 0.00 0.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
224 226 5.931724 GCTTAAGCTTCTCTCTTTTCTCTGT 59.068 40.000 20.38 0.00 38.21 3.41
340 344 9.325198 TCGATTCAGTATTACAATTTACAGCAT 57.675 29.630 0.00 0.00 0.00 3.79
376 380 0.774908 CCCTACCTTGACCAAACCCA 59.225 55.000 0.00 0.00 0.00 4.51
382 386 1.142060 CACACAACCCTACCTTGACCA 59.858 52.381 0.00 0.00 0.00 4.02
388 392 3.995597 TGGCACACAACCCTACCT 58.004 55.556 0.00 0.00 0.00 3.08
398 402 4.798433 TGACAGTCCATGGCACAC 57.202 55.556 6.96 0.00 44.15 3.82
467 482 5.126545 GGAATGGAACGCCTAAATAAAGGTT 59.873 40.000 0.00 0.00 39.02 3.50
492 1329 5.698741 TCCAACTCTGAACCATCATACAT 57.301 39.130 0.00 0.00 34.37 2.29
495 1332 6.312141 TGAATCCAACTCTGAACCATCATA 57.688 37.500 0.00 0.00 34.37 2.15
524 1361 3.614588 GTGAAACTAAACACCGCACTTC 58.385 45.455 0.00 0.00 0.00 3.01
530 1367 0.111001 CGCCGTGAAACTAAACACCG 60.111 55.000 0.00 0.00 34.05 4.94
575 1412 8.832735 AGTGAAAAAGATTACCAGTCCCTATAA 58.167 33.333 0.00 0.00 0.00 0.98
602 1441 1.318576 CACCTCCCAACAAAGACACC 58.681 55.000 0.00 0.00 0.00 4.16
671 1622 3.449322 ACATAAAAACGCAGTGCTACG 57.551 42.857 14.33 0.00 45.00 3.51
962 1919 0.458716 GTTACCGGAGAGCTGCACTC 60.459 60.000 17.26 17.26 46.66 3.51
1264 2221 2.358615 TGTCGCAGCTTTCGCCAT 60.359 55.556 0.53 0.00 36.60 4.40
1626 2583 4.404394 ACCTTTGAAACAACCGGAAGATTT 59.596 37.500 9.46 2.60 0.00 2.17
1727 2684 2.490217 CTACGACCTCTGGTGGCG 59.510 66.667 0.00 0.00 35.25 5.69
1878 2835 3.019564 AGCAACAACTTCAACAAGCTCT 58.980 40.909 0.00 0.00 32.09 4.09
2019 2976 8.798859 AGAAATATACAAATGCAGCCCTATAG 57.201 34.615 0.00 0.00 0.00 1.31
2020 2977 9.586732 AAAGAAATATACAAATGCAGCCCTATA 57.413 29.630 0.00 0.00 0.00 1.31
2021 2978 8.362639 CAAAGAAATATACAAATGCAGCCCTAT 58.637 33.333 0.00 0.00 0.00 2.57
2031 2988 6.608808 AGAGCAGGCCAAAGAAATATACAAAT 59.391 34.615 5.01 0.00 0.00 2.32
2059 3016 7.347508 TGACTTGACTAATAAGAAAACTCGC 57.652 36.000 0.00 0.00 0.00 5.03
2090 3047 9.142515 CACACAAAGCATACACATTTATGATTT 57.857 29.630 1.51 1.51 44.83 2.17
2091 3048 8.306038 ACACACAAAGCATACACATTTATGATT 58.694 29.630 0.00 0.00 39.25 2.57
2092 3049 7.756272 CACACACAAAGCATACACATTTATGAT 59.244 33.333 0.00 0.00 31.96 2.45
2093 3050 7.040823 TCACACACAAAGCATACACATTTATGA 60.041 33.333 0.00 0.00 31.96 2.15
2094 3051 7.083230 TCACACACAAAGCATACACATTTATG 58.917 34.615 0.00 0.00 33.25 1.90
2225 3202 5.513962 GGGAAAAGGAAGATAGATAGGGCAG 60.514 48.000 0.00 0.00 0.00 4.85
2267 3245 8.657074 TTGTCAGGATATAAACCAATTACTCG 57.343 34.615 0.00 0.00 0.00 4.18
2300 3278 5.091431 GCATACAAGTGCTGAATGACTTTC 58.909 41.667 0.00 0.00 41.82 2.62
2305 3283 3.628942 GGATGCATACAAGTGCTGAATGA 59.371 43.478 3.28 0.00 45.27 2.57
2309 3596 3.011818 CAAGGATGCATACAAGTGCTGA 58.988 45.455 12.53 0.00 45.27 4.26
2355 3642 6.747280 GGAAACAAAAGTATCAATGATGACGG 59.253 38.462 5.91 0.00 38.69 4.79
2384 3671 7.923878 GCTGGTTAACCTGAAACATTTCTTTAA 59.076 33.333 29.72 2.87 38.02 1.52
2452 3739 2.279173 ACTAAACTTGGAGGAGGGCAT 58.721 47.619 0.00 0.00 0.00 4.40
2514 3801 4.326817 CACACAAAGTCACAAACACAATGG 59.673 41.667 0.00 0.00 0.00 3.16
2704 4117 1.736126 CAGGCATGAAGTGTAGTGCAG 59.264 52.381 0.00 0.00 39.27 4.41
2742 4155 1.365999 TGAGCGAACGTGGTCATGT 59.634 52.632 3.88 0.00 41.12 3.21
2766 4179 4.485163 GTGCAACTGCCACCTAAAATAAG 58.515 43.478 0.00 0.00 41.18 1.73
2767 4180 4.513198 GTGCAACTGCCACCTAAAATAA 57.487 40.909 0.00 0.00 41.18 1.40
2880 4293 4.342862 ACGAGCACATATAGCCATTTCT 57.657 40.909 0.00 0.00 0.00 2.52
3048 4461 6.055231 TCTAAAACATCGTTGGTCAAAGTG 57.945 37.500 0.00 0.00 0.00 3.16
3108 4521 1.068895 TGCAGGTTGAAAGGTGCAATG 59.931 47.619 0.00 0.00 42.79 2.82
3141 4554 2.014068 GCTGTCAGGGCACTTACATCC 61.014 57.143 2.87 0.00 30.96 3.51
3464 4885 7.934120 GGAACTGGATGTAAGTTAGAAGCATAT 59.066 37.037 0.00 0.00 37.98 1.78
3538 4959 5.602978 TGAGGAGTTAAGAGAAAAGGAGTGT 59.397 40.000 0.00 0.00 0.00 3.55
3789 5312 0.680921 TTCTATGGGCAGCCACAAGC 60.681 55.000 15.19 0.00 44.25 4.01
3810 5333 7.733402 TTTGCTCCTTAATTAGTTTGTACGT 57.267 32.000 0.00 0.00 0.00 3.57
3811 5334 8.898792 GTTTTTGCTCCTTAATTAGTTTGTACG 58.101 33.333 0.00 0.00 0.00 3.67
3848 5371 7.935210 GCTAACATTAAGTTATTAGCCCTACCA 59.065 37.037 12.71 0.00 42.35 3.25
3849 5372 7.935210 TGCTAACATTAAGTTATTAGCCCTACC 59.065 37.037 17.87 0.00 45.82 3.18
3880 5403 6.841229 ACCTACAGGAGAATATGACATCAGAA 59.159 38.462 1.29 0.00 38.94 3.02
3881 5404 6.377080 ACCTACAGGAGAATATGACATCAGA 58.623 40.000 1.29 0.00 38.94 3.27
4070 5593 3.768757 ACAGAGATCAGAGAGTTTCAGGG 59.231 47.826 0.00 0.00 0.00 4.45
4117 5640 2.562298 GCCAACAAATCTGATGGAACCA 59.438 45.455 0.00 0.00 46.03 3.67
4151 5674 0.969149 TCACTGTCGAGCCAGATGTT 59.031 50.000 9.80 0.00 36.30 2.71
4165 5688 1.279271 CCCTTCCCTACACCTTCACTG 59.721 57.143 0.00 0.00 0.00 3.66
4191 5714 0.248296 TTTCACAAAGAACGTGGCGC 60.248 50.000 0.00 0.00 35.56 6.53
4312 5838 5.677567 TCGCCATCTCGTATGGATATACTA 58.322 41.667 19.46 0.00 41.64 1.82
4321 5847 1.716050 CGTGAATCGCCATCTCGTATG 59.284 52.381 0.00 0.00 0.00 2.39
4325 5851 0.319040 ATCCGTGAATCGCCATCTCG 60.319 55.000 0.00 0.00 38.35 4.04
4326 5852 1.795286 GAATCCGTGAATCGCCATCTC 59.205 52.381 0.00 0.00 38.35 2.75
4327 5853 1.541233 GGAATCCGTGAATCGCCATCT 60.541 52.381 0.00 0.00 38.35 2.90
4330 5856 1.068588 CTAGGAATCCGTGAATCGCCA 59.931 52.381 0.00 0.00 38.35 5.69
4337 5863 1.764854 GGGCCCTAGGAATCCGTGA 60.765 63.158 17.04 0.00 0.00 4.35
4339 5865 2.842936 CGGGCCCTAGGAATCCGT 60.843 66.667 22.43 0.00 36.38 4.69
4343 5869 1.842010 GGTAGCGGGCCCTAGGAAT 60.842 63.158 22.43 1.11 0.00 3.01
4344 5870 2.445274 GGTAGCGGGCCCTAGGAA 60.445 66.667 22.43 0.00 0.00 3.36
4407 5933 1.372087 CCATCAGTCGAGCTTTGCCC 61.372 60.000 0.00 0.00 0.00 5.36
4408 5934 1.372087 CCCATCAGTCGAGCTTTGCC 61.372 60.000 0.00 0.00 0.00 4.52
4409 5935 0.391661 TCCCATCAGTCGAGCTTTGC 60.392 55.000 0.00 0.00 0.00 3.68
4410 5936 1.649664 CTCCCATCAGTCGAGCTTTG 58.350 55.000 0.00 0.00 0.00 2.77
4411 5937 0.539051 CCTCCCATCAGTCGAGCTTT 59.461 55.000 0.00 0.00 0.00 3.51
4483 6009 1.764851 TAACACGTTAACGACACCCG 58.235 50.000 33.06 15.53 43.02 5.28
4490 6016 2.477375 ACACCAGCATAACACGTTAACG 59.523 45.455 25.68 25.68 46.33 3.18
4491 6017 4.092383 CCTACACCAGCATAACACGTTAAC 59.908 45.833 0.00 0.00 0.00 2.01
4492 6018 4.021280 TCCTACACCAGCATAACACGTTAA 60.021 41.667 0.00 0.00 0.00 2.01
4493 6019 3.510753 TCCTACACCAGCATAACACGTTA 59.489 43.478 0.00 0.00 0.00 3.18
4494 6020 2.300723 TCCTACACCAGCATAACACGTT 59.699 45.455 0.00 0.00 0.00 3.99
4495 6021 1.897133 TCCTACACCAGCATAACACGT 59.103 47.619 0.00 0.00 0.00 4.49
4496 6022 2.665649 TCCTACACCAGCATAACACG 57.334 50.000 0.00 0.00 0.00 4.49
4501 6027 5.925509 GGAAAACTATCCTACACCAGCATA 58.074 41.667 0.00 0.00 36.50 3.14
4502 6028 4.781934 GGAAAACTATCCTACACCAGCAT 58.218 43.478 0.00 0.00 36.50 3.79
4503 6029 4.216411 GGAAAACTATCCTACACCAGCA 57.784 45.455 0.00 0.00 36.50 4.41
4546 6072 3.634448 ACTATCTCAGACTGACCCAATCG 59.366 47.826 0.00 0.00 0.00 3.34
4547 6073 4.646945 TCACTATCTCAGACTGACCCAATC 59.353 45.833 0.00 0.00 0.00 2.67
4548 6074 4.404073 GTCACTATCTCAGACTGACCCAAT 59.596 45.833 0.00 0.00 28.50 3.16
4549 6075 3.764434 GTCACTATCTCAGACTGACCCAA 59.236 47.826 0.00 0.00 28.50 4.12
4550 6076 3.010696 AGTCACTATCTCAGACTGACCCA 59.989 47.826 0.00 0.00 40.83 4.51
4551 6077 3.626930 AGTCACTATCTCAGACTGACCC 58.373 50.000 0.00 0.00 40.83 4.46
4596 6125 1.143305 CACAAACACTGCTCTCCTCG 58.857 55.000 0.00 0.00 0.00 4.63
4597 6126 0.871057 GCACAAACACTGCTCTCCTC 59.129 55.000 0.00 0.00 0.00 3.71
4612 6141 0.620030 ATACCCTCATGCACAGCACA 59.380 50.000 0.00 0.00 43.04 4.57
4613 6142 1.402968 CAATACCCTCATGCACAGCAC 59.597 52.381 0.00 0.00 43.04 4.40
4614 6143 1.004628 ACAATACCCTCATGCACAGCA 59.995 47.619 0.00 0.00 44.86 4.41
4615 6144 1.755179 ACAATACCCTCATGCACAGC 58.245 50.000 0.00 0.00 0.00 4.40
4616 6145 3.879295 CCTAACAATACCCTCATGCACAG 59.121 47.826 0.00 0.00 0.00 3.66
4620 6149 3.496870 CCTCCCTAACAATACCCTCATGC 60.497 52.174 0.00 0.00 0.00 4.06
4656 6185 7.997223 TGCCTATTGTCTGTATGTACTAGTACT 59.003 37.037 28.56 18.27 37.00 2.73
4657 6186 8.074972 GTGCCTATTGTCTGTATGTACTAGTAC 58.925 40.741 23.58 23.58 36.63 2.73
4658 6187 7.997223 AGTGCCTATTGTCTGTATGTACTAGTA 59.003 37.037 0.00 0.00 0.00 1.82
4659 6188 6.834451 AGTGCCTATTGTCTGTATGTACTAGT 59.166 38.462 0.00 0.00 0.00 2.57
4660 6189 7.142021 CAGTGCCTATTGTCTGTATGTACTAG 58.858 42.308 0.00 0.00 0.00 2.57
4661 6190 6.461092 GCAGTGCCTATTGTCTGTATGTACTA 60.461 42.308 2.85 0.00 0.00 1.82
4662 6191 5.682471 GCAGTGCCTATTGTCTGTATGTACT 60.682 44.000 2.85 0.00 0.00 2.73
4663 6192 4.508124 GCAGTGCCTATTGTCTGTATGTAC 59.492 45.833 2.85 0.00 0.00 2.90
4676 6205 2.427540 GATCTCGCCGCAGTGCCTAT 62.428 60.000 10.11 0.00 0.00 2.57
4708 6237 1.740025 GAATTACACCTGCAGCTCACC 59.260 52.381 8.66 0.00 0.00 4.02
4782 6311 3.314913 CACAAACTGCAACCATCTGTGTA 59.685 43.478 0.00 0.00 0.00 2.90
4806 6335 5.570973 TGAATTAATCGTGAAAATGCAACCG 59.429 36.000 0.00 0.00 0.00 4.44
4819 6348 2.273557 CGTCCCCGTTGAATTAATCGT 58.726 47.619 0.00 0.00 0.00 3.73
4822 6351 2.413310 AGCGTCCCCGTTGAATTAAT 57.587 45.000 0.00 0.00 36.15 1.40
4823 6352 2.419021 CCTAGCGTCCCCGTTGAATTAA 60.419 50.000 0.00 0.00 36.15 1.40
4874 6406 9.434420 CCTGGCAATGAAAACTATTTAATGAAA 57.566 29.630 0.00 0.00 0.00 2.69
4875 6407 8.811017 TCCTGGCAATGAAAACTATTTAATGAA 58.189 29.630 0.00 0.00 0.00 2.57
4877 6409 9.090692 CTTCCTGGCAATGAAAACTATTTAATG 57.909 33.333 0.00 0.00 0.00 1.90
4878 6410 7.765819 GCTTCCTGGCAATGAAAACTATTTAAT 59.234 33.333 0.00 0.00 0.00 1.40
4880 6412 6.437162 AGCTTCCTGGCAATGAAAACTATTTA 59.563 34.615 0.00 0.00 34.17 1.40
4884 6420 3.507233 CAGCTTCCTGGCAATGAAAACTA 59.493 43.478 0.00 0.00 35.38 2.24
4892 6428 1.345063 AAAAGCAGCTTCCTGGCAAT 58.655 45.000 8.48 0.00 39.54 3.56
4893 6429 1.122227 AAAAAGCAGCTTCCTGGCAA 58.878 45.000 8.48 0.00 39.54 4.52
4909 6445 3.633065 CCGGGTGGTTTTCACTCTAAAAA 59.367 43.478 0.00 0.00 44.55 1.94
4921 6457 3.264845 AGGATGGCCGGGTGGTTT 61.265 61.111 2.18 0.00 39.96 3.27
4927 6463 1.345715 AACTTAGGAGGATGGCCGGG 61.346 60.000 2.18 0.00 39.96 5.73
4977 6513 6.842676 AGAGTGAACTCAAAATTTAGGGAGT 58.157 36.000 12.76 11.98 45.21 3.85
4978 6514 6.936900 TGAGAGTGAACTCAAAATTTAGGGAG 59.063 38.462 12.76 11.00 45.21 4.30
4979 6515 6.837312 TGAGAGTGAACTCAAAATTTAGGGA 58.163 36.000 12.76 0.00 45.21 4.20
5024 6560 7.865706 ATGGATTGAAGCGAGTAGTATTTTT 57.134 32.000 0.00 0.00 0.00 1.94
5025 6561 9.561069 AATATGGATTGAAGCGAGTAGTATTTT 57.439 29.630 0.00 0.00 0.00 1.82
5028 6564 9.862371 CTTAATATGGATTGAAGCGAGTAGTAT 57.138 33.333 0.00 0.00 0.00 2.12
5029 6565 8.857098 ACTTAATATGGATTGAAGCGAGTAGTA 58.143 33.333 0.00 0.00 0.00 1.82
5030 6566 7.727181 ACTTAATATGGATTGAAGCGAGTAGT 58.273 34.615 0.00 0.00 0.00 2.73
5031 6567 8.491152 CAACTTAATATGGATTGAAGCGAGTAG 58.509 37.037 0.00 0.00 0.00 2.57
5032 6568 7.042051 GCAACTTAATATGGATTGAAGCGAGTA 60.042 37.037 0.00 0.00 0.00 2.59
5033 6569 6.238484 GCAACTTAATATGGATTGAAGCGAGT 60.238 38.462 0.00 0.00 0.00 4.18
5034 6570 6.017605 AGCAACTTAATATGGATTGAAGCGAG 60.018 38.462 0.00 0.00 0.00 5.03
5035 6571 5.822519 AGCAACTTAATATGGATTGAAGCGA 59.177 36.000 0.00 0.00 0.00 4.93
5036 6572 6.064846 AGCAACTTAATATGGATTGAAGCG 57.935 37.500 0.00 0.00 0.00 4.68
5037 6573 9.971922 AATTAGCAACTTAATATGGATTGAAGC 57.028 29.630 0.00 0.00 0.00 3.86
5043 6579 9.025041 GCCCTAAATTAGCAACTTAATATGGAT 57.975 33.333 0.00 0.00 0.00 3.41
5044 6580 8.001875 TGCCCTAAATTAGCAACTTAATATGGA 58.998 33.333 0.00 0.00 32.56 3.41
5045 6581 8.177119 TGCCCTAAATTAGCAACTTAATATGG 57.823 34.615 0.00 0.00 32.56 2.74
5046 6582 9.630098 CATGCCCTAAATTAGCAACTTAATATG 57.370 33.333 0.00 0.00 40.46 1.78
5047 6583 8.306761 GCATGCCCTAAATTAGCAACTTAATAT 58.693 33.333 6.36 0.00 40.46 1.28
5048 6584 7.521423 CGCATGCCCTAAATTAGCAACTTAATA 60.521 37.037 13.15 0.00 40.46 0.98
5049 6585 6.515832 GCATGCCCTAAATTAGCAACTTAAT 58.484 36.000 6.36 0.00 40.46 1.40
5050 6586 5.449862 CGCATGCCCTAAATTAGCAACTTAA 60.450 40.000 13.15 0.00 40.46 1.85
5051 6587 4.036262 CGCATGCCCTAAATTAGCAACTTA 59.964 41.667 13.15 0.00 40.46 2.24
5052 6588 3.181487 CGCATGCCCTAAATTAGCAACTT 60.181 43.478 13.15 0.00 40.46 2.66
5053 6589 2.358898 CGCATGCCCTAAATTAGCAACT 59.641 45.455 13.15 0.00 40.46 3.16
5054 6590 2.099098 ACGCATGCCCTAAATTAGCAAC 59.901 45.455 13.15 0.00 40.46 4.17
5055 6591 2.098934 CACGCATGCCCTAAATTAGCAA 59.901 45.455 13.15 0.00 40.46 3.91
5056 6592 1.675483 CACGCATGCCCTAAATTAGCA 59.325 47.619 13.15 0.00 41.50 3.49
5057 6593 1.676006 ACACGCATGCCCTAAATTAGC 59.324 47.619 13.15 0.00 0.00 3.09
5058 6594 4.127171 AGTACACGCATGCCCTAAATTAG 58.873 43.478 13.15 0.00 0.00 1.73
5059 6595 4.145365 AGTACACGCATGCCCTAAATTA 57.855 40.909 13.15 0.00 0.00 1.40
5060 6596 2.999331 AGTACACGCATGCCCTAAATT 58.001 42.857 13.15 0.00 0.00 1.82
5061 6597 2.710096 AGTACACGCATGCCCTAAAT 57.290 45.000 13.15 0.00 0.00 1.40
5062 6598 3.613494 TTAGTACACGCATGCCCTAAA 57.387 42.857 13.15 0.00 0.00 1.85
5063 6599 3.613494 TTTAGTACACGCATGCCCTAA 57.387 42.857 13.15 8.02 0.00 2.69
5064 6600 3.724374 GATTTAGTACACGCATGCCCTA 58.276 45.455 13.15 2.07 0.00 3.53
5065 6601 2.561569 GATTTAGTACACGCATGCCCT 58.438 47.619 13.15 3.05 0.00 5.19
5066 6602 1.260561 CGATTTAGTACACGCATGCCC 59.739 52.381 13.15 0.00 0.00 5.36
5067 6603 1.260561 CCGATTTAGTACACGCATGCC 59.739 52.381 13.15 0.00 0.00 4.40
5068 6604 1.332904 GCCGATTTAGTACACGCATGC 60.333 52.381 7.91 7.91 0.00 4.06
5069 6605 1.071502 CGCCGATTTAGTACACGCATG 60.072 52.381 0.00 0.00 0.00 4.06
5070 6606 1.202325 TCGCCGATTTAGTACACGCAT 60.202 47.619 0.00 0.00 0.00 4.73
5071 6607 0.170784 TCGCCGATTTAGTACACGCA 59.829 50.000 0.00 0.00 0.00 5.24
5072 6608 0.569349 GTCGCCGATTTAGTACACGC 59.431 55.000 0.00 0.00 0.00 5.34
5073 6609 1.898938 TGTCGCCGATTTAGTACACG 58.101 50.000 0.00 0.00 0.00 4.49
5074 6610 5.954434 TTAATGTCGCCGATTTAGTACAC 57.046 39.130 0.00 0.00 0.00 2.90
5075 6611 7.329962 CCATATTAATGTCGCCGATTTAGTACA 59.670 37.037 0.00 0.00 0.00 2.90
5076 6612 7.543172 TCCATATTAATGTCGCCGATTTAGTAC 59.457 37.037 0.00 0.00 0.00 2.73
5077 6613 7.604549 TCCATATTAATGTCGCCGATTTAGTA 58.395 34.615 0.00 0.00 0.00 1.82
5078 6614 6.460781 TCCATATTAATGTCGCCGATTTAGT 58.539 36.000 0.00 0.00 0.00 2.24
5079 6615 6.961359 TCCATATTAATGTCGCCGATTTAG 57.039 37.500 0.00 0.00 0.00 1.85
5080 6616 7.148323 CCAATCCATATTAATGTCGCCGATTTA 60.148 37.037 0.00 0.00 0.00 1.40
5081 6617 6.349280 CCAATCCATATTAATGTCGCCGATTT 60.349 38.462 0.00 0.00 0.00 2.17
5082 6618 5.123820 CCAATCCATATTAATGTCGCCGATT 59.876 40.000 0.00 0.00 0.00 3.34
5083 6619 4.635765 CCAATCCATATTAATGTCGCCGAT 59.364 41.667 0.00 0.00 0.00 4.18
5084 6620 4.000325 CCAATCCATATTAATGTCGCCGA 59.000 43.478 0.00 0.00 0.00 5.54
5085 6621 4.000325 TCCAATCCATATTAATGTCGCCG 59.000 43.478 0.00 0.00 0.00 6.46
5086 6622 5.003804 ACTCCAATCCATATTAATGTCGCC 58.996 41.667 0.00 0.00 0.00 5.54
5087 6623 5.700832 TCACTCCAATCCATATTAATGTCGC 59.299 40.000 0.00 0.00 0.00 5.19
5088 6624 6.931281 ACTCACTCCAATCCATATTAATGTCG 59.069 38.462 0.00 0.00 0.00 4.35
5089 6625 7.173907 CCACTCACTCCAATCCATATTAATGTC 59.826 40.741 0.00 0.00 0.00 3.06
5090 6626 7.000472 CCACTCACTCCAATCCATATTAATGT 59.000 38.462 0.00 0.00 0.00 2.71
5091 6627 7.000472 ACCACTCACTCCAATCCATATTAATG 59.000 38.462 0.00 0.00 0.00 1.90
5092 6628 7.154191 ACCACTCACTCCAATCCATATTAAT 57.846 36.000 0.00 0.00 0.00 1.40
5093 6629 6.575244 ACCACTCACTCCAATCCATATTAA 57.425 37.500 0.00 0.00 0.00 1.40
5094 6630 7.872061 ATACCACTCACTCCAATCCATATTA 57.128 36.000 0.00 0.00 0.00 0.98
5095 6631 6.770286 ATACCACTCACTCCAATCCATATT 57.230 37.500 0.00 0.00 0.00 1.28
5096 6632 8.454859 AATATACCACTCACTCCAATCCATAT 57.545 34.615 0.00 0.00 0.00 1.78
5097 6633 7.872061 AATATACCACTCACTCCAATCCATA 57.128 36.000 0.00 0.00 0.00 2.74
5098 6634 6.770286 AATATACCACTCACTCCAATCCAT 57.230 37.500 0.00 0.00 0.00 3.41
5099 6635 6.575244 AAATATACCACTCACTCCAATCCA 57.425 37.500 0.00 0.00 0.00 3.41
5100 6636 7.881775 AAAAATATACCACTCACTCCAATCC 57.118 36.000 0.00 0.00 0.00 3.01
5121 6657 6.016610 GCTAAGTGATGTCAACACCCTAAAAA 60.017 38.462 9.43 0.00 38.82 1.94
5122 6658 5.472137 GCTAAGTGATGTCAACACCCTAAAA 59.528 40.000 9.43 0.00 38.82 1.52
5123 6659 5.001232 GCTAAGTGATGTCAACACCCTAAA 58.999 41.667 9.43 0.00 38.82 1.85
5124 6660 4.564821 GGCTAAGTGATGTCAACACCCTAA 60.565 45.833 9.43 0.00 38.82 2.69
5125 6661 3.055385 GGCTAAGTGATGTCAACACCCTA 60.055 47.826 9.43 1.98 38.82 3.53
5126 6662 2.290323 GGCTAAGTGATGTCAACACCCT 60.290 50.000 9.43 0.93 38.82 4.34
5127 6663 2.084546 GGCTAAGTGATGTCAACACCC 58.915 52.381 9.43 0.78 38.82 4.61
5128 6664 2.084546 GGGCTAAGTGATGTCAACACC 58.915 52.381 9.43 0.00 38.82 4.16
5129 6665 3.059352 AGGGCTAAGTGATGTCAACAC 57.941 47.619 5.13 5.13 38.38 3.32
5130 6666 3.559171 GGAAGGGCTAAGTGATGTCAACA 60.559 47.826 0.00 0.00 0.00 3.33
5131 6667 3.010420 GGAAGGGCTAAGTGATGTCAAC 58.990 50.000 0.00 0.00 0.00 3.18
5132 6668 2.642311 TGGAAGGGCTAAGTGATGTCAA 59.358 45.455 0.00 0.00 0.00 3.18
5133 6669 2.027192 GTGGAAGGGCTAAGTGATGTCA 60.027 50.000 0.00 0.00 0.00 3.58
5134 6670 2.237392 AGTGGAAGGGCTAAGTGATGTC 59.763 50.000 0.00 0.00 0.00 3.06
5135 6671 2.269940 AGTGGAAGGGCTAAGTGATGT 58.730 47.619 0.00 0.00 0.00 3.06
5136 6672 4.696479 ATAGTGGAAGGGCTAAGTGATG 57.304 45.455 0.00 0.00 0.00 3.07
5137 6673 4.971924 AGAATAGTGGAAGGGCTAAGTGAT 59.028 41.667 0.00 0.00 0.00 3.06
5138 6674 4.162320 CAGAATAGTGGAAGGGCTAAGTGA 59.838 45.833 0.00 0.00 0.00 3.41
5139 6675 4.446371 CAGAATAGTGGAAGGGCTAAGTG 58.554 47.826 0.00 0.00 0.00 3.16
5140 6676 3.118223 GCAGAATAGTGGAAGGGCTAAGT 60.118 47.826 0.00 0.00 0.00 2.24
5141 6677 3.135530 AGCAGAATAGTGGAAGGGCTAAG 59.864 47.826 0.00 0.00 0.00 2.18
5142 6678 3.115390 AGCAGAATAGTGGAAGGGCTAA 58.885 45.455 0.00 0.00 0.00 3.09
5143 6679 2.435805 CAGCAGAATAGTGGAAGGGCTA 59.564 50.000 0.00 0.00 0.00 3.93
5144 6680 1.211457 CAGCAGAATAGTGGAAGGGCT 59.789 52.381 0.00 0.00 0.00 5.19
5145 6681 1.673168 CAGCAGAATAGTGGAAGGGC 58.327 55.000 0.00 0.00 0.00 5.19
5146 6682 1.673168 GCAGCAGAATAGTGGAAGGG 58.327 55.000 0.00 0.00 0.00 3.95
5147 6683 1.673168 GGCAGCAGAATAGTGGAAGG 58.327 55.000 0.00 0.00 0.00 3.46
5148 6684 1.065199 TGGGCAGCAGAATAGTGGAAG 60.065 52.381 0.00 0.00 0.00 3.46
5149 6685 0.991146 TGGGCAGCAGAATAGTGGAA 59.009 50.000 0.00 0.00 0.00 3.53
5150 6686 0.991146 TTGGGCAGCAGAATAGTGGA 59.009 50.000 0.00 0.00 0.00 4.02
5151 6687 1.747355 CTTTGGGCAGCAGAATAGTGG 59.253 52.381 0.00 0.00 0.00 4.00
5152 6688 2.681848 CTCTTTGGGCAGCAGAATAGTG 59.318 50.000 0.00 0.00 0.00 2.74
5153 6689 2.943199 GCTCTTTGGGCAGCAGAATAGT 60.943 50.000 0.00 0.00 35.56 2.12
5154 6690 1.674962 GCTCTTTGGGCAGCAGAATAG 59.325 52.381 0.00 0.00 35.56 1.73
5155 6691 1.004628 TGCTCTTTGGGCAGCAGAATA 59.995 47.619 0.00 0.00 40.80 1.75
5156 6692 0.251474 TGCTCTTTGGGCAGCAGAAT 60.251 50.000 0.00 0.00 40.80 2.40
5157 6693 0.467844 TTGCTCTTTGGGCAGCAGAA 60.468 50.000 0.00 0.00 46.18 3.02
5158 6694 0.467844 TTTGCTCTTTGGGCAGCAGA 60.468 50.000 0.00 0.00 46.18 4.26
5159 6695 0.390124 TTTTGCTCTTTGGGCAGCAG 59.610 50.000 0.00 0.00 46.18 4.24
5160 6696 1.050204 ATTTTGCTCTTTGGGCAGCA 58.950 45.000 0.00 0.00 44.02 4.41
5161 6697 2.174363 AATTTTGCTCTTTGGGCAGC 57.826 45.000 0.00 0.00 40.90 5.25
5162 6698 3.251487 CCAAAATTTTGCTCTTTGGGCAG 59.749 43.478 22.90 3.68 43.53 4.85
5163 6699 3.212685 CCAAAATTTTGCTCTTTGGGCA 58.787 40.909 22.90 0.00 43.53 5.36
5164 6700 2.030893 GCCAAAATTTTGCTCTTTGGGC 60.031 45.455 22.90 15.24 46.10 5.36
5165 6701 2.223845 CGCCAAAATTTTGCTCTTTGGG 59.776 45.455 22.90 13.40 46.10 4.12
5167 6703 2.349722 GGCGCCAAAATTTTGCTCTTTG 60.350 45.455 24.80 10.91 36.86 2.77
5168 6704 1.872952 GGCGCCAAAATTTTGCTCTTT 59.127 42.857 24.80 0.00 36.86 2.52
5169 6705 1.070601 AGGCGCCAAAATTTTGCTCTT 59.929 42.857 31.54 9.09 36.86 2.85
5170 6706 0.681175 AGGCGCCAAAATTTTGCTCT 59.319 45.000 31.54 14.00 36.86 4.09
5171 6707 2.094752 TCTAGGCGCCAAAATTTTGCTC 60.095 45.455 31.54 15.63 36.86 4.26
5172 6708 1.892474 TCTAGGCGCCAAAATTTTGCT 59.108 42.857 31.54 16.73 36.86 3.91
5173 6709 1.992667 GTCTAGGCGCCAAAATTTTGC 59.007 47.619 31.54 17.08 36.86 3.68
5174 6710 3.296322 TGTCTAGGCGCCAAAATTTTG 57.704 42.857 31.54 21.65 37.90 2.44
5175 6711 4.535526 AATGTCTAGGCGCCAAAATTTT 57.464 36.364 31.54 12.47 0.00 1.82
5176 6712 4.494484 GAAATGTCTAGGCGCCAAAATTT 58.506 39.130 31.54 23.83 0.00 1.82
5177 6713 3.119137 GGAAATGTCTAGGCGCCAAAATT 60.119 43.478 31.54 16.94 0.00 1.82
5178 6714 2.427095 GGAAATGTCTAGGCGCCAAAAT 59.573 45.455 31.54 10.73 0.00 1.82
5179 6715 1.816224 GGAAATGTCTAGGCGCCAAAA 59.184 47.619 31.54 12.89 0.00 2.44
5180 6716 1.459450 GGAAATGTCTAGGCGCCAAA 58.541 50.000 31.54 15.80 0.00 3.28
5181 6717 0.393808 GGGAAATGTCTAGGCGCCAA 60.394 55.000 31.54 11.10 0.00 4.52
5182 6718 1.223487 GGGAAATGTCTAGGCGCCA 59.777 57.895 31.54 14.00 0.00 5.69
5183 6719 1.095807 GTGGGAAATGTCTAGGCGCC 61.096 60.000 21.89 21.89 0.00 6.53
5184 6720 0.107654 AGTGGGAAATGTCTAGGCGC 60.108 55.000 0.00 0.00 0.00 6.53
5185 6721 1.207089 TGAGTGGGAAATGTCTAGGCG 59.793 52.381 0.00 0.00 0.00 5.52
5186 6722 3.010420 GTTGAGTGGGAAATGTCTAGGC 58.990 50.000 0.00 0.00 0.00 3.93
5187 6723 3.610911 GGTTGAGTGGGAAATGTCTAGG 58.389 50.000 0.00 0.00 0.00 3.02
5188 6724 3.262420 CGGTTGAGTGGGAAATGTCTAG 58.738 50.000 0.00 0.00 0.00 2.43
5189 6725 2.614481 GCGGTTGAGTGGGAAATGTCTA 60.614 50.000 0.00 0.00 0.00 2.59
5190 6726 1.882352 GCGGTTGAGTGGGAAATGTCT 60.882 52.381 0.00 0.00 0.00 3.41
5191 6727 0.521735 GCGGTTGAGTGGGAAATGTC 59.478 55.000 0.00 0.00 0.00 3.06
5192 6728 0.893727 GGCGGTTGAGTGGGAAATGT 60.894 55.000 0.00 0.00 0.00 2.71
5193 6729 0.609131 AGGCGGTTGAGTGGGAAATG 60.609 55.000 0.00 0.00 0.00 2.32
5194 6730 0.322546 GAGGCGGTTGAGTGGGAAAT 60.323 55.000 0.00 0.00 0.00 2.17
5195 6731 1.072505 GAGGCGGTTGAGTGGGAAA 59.927 57.895 0.00 0.00 0.00 3.13
5196 6732 2.747686 GAGGCGGTTGAGTGGGAA 59.252 61.111 0.00 0.00 0.00 3.97
5197 6733 3.319198 GGAGGCGGTTGAGTGGGA 61.319 66.667 0.00 0.00 0.00 4.37
5198 6734 3.612247 CTGGAGGCGGTTGAGTGGG 62.612 68.421 0.00 0.00 0.00 4.61
5199 6735 2.046892 CTGGAGGCGGTTGAGTGG 60.047 66.667 0.00 0.00 0.00 4.00
5200 6736 1.071471 AACTGGAGGCGGTTGAGTG 59.929 57.895 0.00 0.00 0.00 3.51
5201 6737 1.071471 CAACTGGAGGCGGTTGAGT 59.929 57.895 0.00 0.00 43.61 3.41
5202 6738 2.328099 GCAACTGGAGGCGGTTGAG 61.328 63.158 0.01 0.00 43.61 3.02
5203 6739 2.281484 GCAACTGGAGGCGGTTGA 60.281 61.111 0.01 0.00 43.61 3.18
5204 6740 3.365265 GGCAACTGGAGGCGGTTG 61.365 66.667 0.00 0.00 43.71 3.77
5214 6750 3.434319 ATTGAGCGGCGGCAACTG 61.434 61.111 19.21 0.00 43.41 3.16
5215 6751 3.434319 CATTGAGCGGCGGCAACT 61.434 61.111 19.21 5.33 43.41 3.16
5216 6752 3.267597 AACATTGAGCGGCGGCAAC 62.268 57.895 19.21 12.10 43.41 4.17
5217 6753 2.976840 GAACATTGAGCGGCGGCAA 61.977 57.895 19.21 12.36 43.41 4.52
5218 6754 3.430862 GAACATTGAGCGGCGGCA 61.431 61.111 19.21 0.00 43.41 5.69
5219 6755 3.430862 TGAACATTGAGCGGCGGC 61.431 61.111 9.78 8.43 40.37 6.53
5220 6756 1.970917 GAGTGAACATTGAGCGGCGG 61.971 60.000 9.78 0.00 0.00 6.13
5221 6757 1.016130 AGAGTGAACATTGAGCGGCG 61.016 55.000 0.51 0.51 0.00 6.46
5222 6758 0.723981 GAGAGTGAACATTGAGCGGC 59.276 55.000 0.00 0.00 0.00 6.53
5223 6759 1.363744 GGAGAGTGAACATTGAGCGG 58.636 55.000 0.00 0.00 0.00 5.52
5224 6760 1.066573 AGGGAGAGTGAACATTGAGCG 60.067 52.381 0.00 0.00 0.00 5.03
5225 6761 2.626840 GAGGGAGAGTGAACATTGAGC 58.373 52.381 0.00 0.00 0.00 4.26
5226 6762 2.093235 GGGAGGGAGAGTGAACATTGAG 60.093 54.545 0.00 0.00 0.00 3.02
5227 6763 1.909302 GGGAGGGAGAGTGAACATTGA 59.091 52.381 0.00 0.00 0.00 2.57
5228 6764 1.065126 GGGGAGGGAGAGTGAACATTG 60.065 57.143 0.00 0.00 0.00 2.82
5229 6765 1.290134 GGGGAGGGAGAGTGAACATT 58.710 55.000 0.00 0.00 0.00 2.71
5230 6766 0.621862 GGGGGAGGGAGAGTGAACAT 60.622 60.000 0.00 0.00 0.00 2.71
5231 6767 1.229529 GGGGGAGGGAGAGTGAACA 60.230 63.158 0.00 0.00 0.00 3.18
5232 6768 3.728772 GGGGGAGGGAGAGTGAAC 58.271 66.667 0.00 0.00 0.00 3.18
5253 6789 0.322456 TTGAACATCGAAGCTGGGGG 60.322 55.000 0.00 0.00 0.00 5.40
5254 6790 1.755179 ATTGAACATCGAAGCTGGGG 58.245 50.000 0.00 0.00 0.00 4.96
5255 6791 5.180117 CCTATAATTGAACATCGAAGCTGGG 59.820 44.000 0.00 0.00 0.00 4.45
5256 6792 5.760253 ACCTATAATTGAACATCGAAGCTGG 59.240 40.000 0.00 0.00 0.00 4.85
5257 6793 6.479990 TCACCTATAATTGAACATCGAAGCTG 59.520 38.462 0.00 0.00 0.00 4.24
5258 6794 6.582636 TCACCTATAATTGAACATCGAAGCT 58.417 36.000 0.00 0.00 0.00 3.74
5259 6795 6.844696 TCACCTATAATTGAACATCGAAGC 57.155 37.500 0.00 0.00 0.00 3.86
5260 6796 8.593492 TCATCACCTATAATTGAACATCGAAG 57.407 34.615 0.00 0.00 0.00 3.79
5261 6797 8.421002 TCTCATCACCTATAATTGAACATCGAA 58.579 33.333 0.00 0.00 0.00 3.71
5262 6798 7.951591 TCTCATCACCTATAATTGAACATCGA 58.048 34.615 0.00 0.00 0.00 3.59
5263 6799 8.768957 ATCTCATCACCTATAATTGAACATCG 57.231 34.615 0.00 0.00 0.00 3.84
5266 6802 9.045223 CGAAATCTCATCACCTATAATTGAACA 57.955 33.333 0.00 0.00 0.00 3.18
5267 6803 8.012241 GCGAAATCTCATCACCTATAATTGAAC 58.988 37.037 0.00 0.00 0.00 3.18
5268 6804 7.714813 TGCGAAATCTCATCACCTATAATTGAA 59.285 33.333 0.00 0.00 0.00 2.69
5269 6805 7.171508 GTGCGAAATCTCATCACCTATAATTGA 59.828 37.037 0.00 0.00 0.00 2.57
5270 6806 7.293745 GTGCGAAATCTCATCACCTATAATTG 58.706 38.462 0.00 0.00 0.00 2.32
5271 6807 6.146184 CGTGCGAAATCTCATCACCTATAATT 59.854 38.462 0.00 0.00 0.00 1.40
5272 6808 5.635280 CGTGCGAAATCTCATCACCTATAAT 59.365 40.000 0.00 0.00 0.00 1.28
5273 6809 4.982295 CGTGCGAAATCTCATCACCTATAA 59.018 41.667 0.00 0.00 0.00 0.98
5274 6810 4.037565 ACGTGCGAAATCTCATCACCTATA 59.962 41.667 0.00 0.00 0.00 1.31
5275 6811 3.181475 ACGTGCGAAATCTCATCACCTAT 60.181 43.478 0.00 0.00 0.00 2.57
5276 6812 2.165641 ACGTGCGAAATCTCATCACCTA 59.834 45.455 0.00 0.00 0.00 3.08
5277 6813 1.066858 ACGTGCGAAATCTCATCACCT 60.067 47.619 0.00 0.00 0.00 4.00
5278 6814 1.324736 GACGTGCGAAATCTCATCACC 59.675 52.381 0.00 0.00 0.00 4.02
5279 6815 2.263077 AGACGTGCGAAATCTCATCAC 58.737 47.619 0.00 0.00 0.00 3.06
5280 6816 2.164422 AGAGACGTGCGAAATCTCATCA 59.836 45.455 8.33 0.00 41.18 3.07
5281 6817 2.803451 AGAGACGTGCGAAATCTCATC 58.197 47.619 8.33 0.00 41.18 2.92
5282 6818 2.949451 AGAGACGTGCGAAATCTCAT 57.051 45.000 8.33 0.00 41.18 2.90
5283 6819 4.105486 CAATAGAGACGTGCGAAATCTCA 58.895 43.478 8.33 0.00 41.18 3.27
5284 6820 4.106197 ACAATAGAGACGTGCGAAATCTC 58.894 43.478 0.00 0.79 39.38 2.75
5285 6821 4.111375 ACAATAGAGACGTGCGAAATCT 57.889 40.909 0.00 1.49 0.00 2.40
5286 6822 5.035443 ACTACAATAGAGACGTGCGAAATC 58.965 41.667 0.00 0.00 0.00 2.17
5287 6823 4.798907 CACTACAATAGAGACGTGCGAAAT 59.201 41.667 0.00 0.00 0.00 2.17
5288 6824 4.163552 CACTACAATAGAGACGTGCGAAA 58.836 43.478 0.00 0.00 0.00 3.46
5289 6825 3.427098 CCACTACAATAGAGACGTGCGAA 60.427 47.826 0.00 0.00 0.00 4.70
5290 6826 2.096980 CCACTACAATAGAGACGTGCGA 59.903 50.000 0.00 0.00 0.00 5.10
5291 6827 2.451132 CCACTACAATAGAGACGTGCG 58.549 52.381 0.00 0.00 0.00 5.34
5292 6828 2.481449 CCCCACTACAATAGAGACGTGC 60.481 54.545 0.00 0.00 0.00 5.34
5293 6829 3.021695 TCCCCACTACAATAGAGACGTG 58.978 50.000 0.00 0.00 0.00 4.49
5294 6830 3.377253 TCCCCACTACAATAGAGACGT 57.623 47.619 0.00 0.00 0.00 4.34
5295 6831 3.181478 GGTTCCCCACTACAATAGAGACG 60.181 52.174 0.00 0.00 0.00 4.18
5296 6832 3.181478 CGGTTCCCCACTACAATAGAGAC 60.181 52.174 0.00 0.00 0.00 3.36
5297 6833 3.028850 CGGTTCCCCACTACAATAGAGA 58.971 50.000 0.00 0.00 0.00 3.10
5298 6834 3.028850 TCGGTTCCCCACTACAATAGAG 58.971 50.000 0.00 0.00 0.00 2.43
5299 6835 3.104519 TCGGTTCCCCACTACAATAGA 57.895 47.619 0.00 0.00 0.00 1.98
5300 6836 3.528532 GTTCGGTTCCCCACTACAATAG 58.471 50.000 0.00 0.00 0.00 1.73
5301 6837 2.236893 GGTTCGGTTCCCCACTACAATA 59.763 50.000 0.00 0.00 0.00 1.90
5302 6838 1.003928 GGTTCGGTTCCCCACTACAAT 59.996 52.381 0.00 0.00 0.00 2.71
5303 6839 0.397564 GGTTCGGTTCCCCACTACAA 59.602 55.000 0.00 0.00 0.00 2.41
5304 6840 1.482748 GGGTTCGGTTCCCCACTACA 61.483 60.000 0.00 0.00 40.88 2.74
5305 6841 1.297689 GGGTTCGGTTCCCCACTAC 59.702 63.158 0.00 0.00 40.88 2.73
5306 6842 1.152074 TGGGTTCGGTTCCCCACTA 60.152 57.895 7.73 0.00 46.06 2.74
5307 6843 2.448931 TGGGTTCGGTTCCCCACT 60.449 61.111 7.73 0.00 46.06 4.00
5310 6846 1.680989 CCATTGGGTTCGGTTCCCC 60.681 63.158 0.00 0.00 44.00 4.81
5311 6847 2.348104 GCCATTGGGTTCGGTTCCC 61.348 63.158 4.53 4.04 44.81 3.97
5312 6848 0.898326 AAGCCATTGGGTTCGGTTCC 60.898 55.000 14.32 0.00 39.37 3.62
5313 6849 0.243636 CAAGCCATTGGGTTCGGTTC 59.756 55.000 17.05 0.00 41.85 3.62
5314 6850 0.469144 ACAAGCCATTGGGTTCGGTT 60.469 50.000 17.05 0.03 41.85 4.44
5315 6851 1.152830 ACAAGCCATTGGGTTCGGT 59.847 52.632 17.05 10.52 41.85 4.69
5316 6852 1.586028 CACAAGCCATTGGGTTCGG 59.414 57.895 17.05 9.90 41.85 4.30
5317 6853 1.586028 CCACAAGCCATTGGGTTCG 59.414 57.895 17.05 14.33 41.85 3.95
5318 6854 1.974543 CCCACAAGCCATTGGGTTC 59.025 57.895 17.05 0.00 46.74 3.62
5319 6855 4.213630 CCCACAAGCCATTGGGTT 57.786 55.556 14.32 14.32 46.74 4.11
5328 6864 0.895100 TGACATGAAGGCCCACAAGC 60.895 55.000 0.00 0.00 0.00 4.01
5329 6865 1.270550 GTTGACATGAAGGCCCACAAG 59.729 52.381 0.00 0.00 0.00 3.16
5330 6866 1.327303 GTTGACATGAAGGCCCACAA 58.673 50.000 0.00 0.00 0.00 3.33
5331 6867 0.888736 CGTTGACATGAAGGCCCACA 60.889 55.000 0.00 0.00 0.00 4.17
5332 6868 0.889186 ACGTTGACATGAAGGCCCAC 60.889 55.000 0.00 0.00 0.00 4.61
5333 6869 0.179004 AACGTTGACATGAAGGCCCA 60.179 50.000 0.00 0.00 0.00 5.36
5334 6870 0.240945 CAACGTTGACATGAAGGCCC 59.759 55.000 23.90 0.00 0.00 5.80
5335 6871 0.240945 CCAACGTTGACATGAAGGCC 59.759 55.000 29.35 0.00 0.00 5.19
5336 6872 1.234821 TCCAACGTTGACATGAAGGC 58.765 50.000 29.35 0.00 0.00 4.35
5337 6873 3.073678 TCATCCAACGTTGACATGAAGG 58.926 45.455 29.35 10.23 29.73 3.46
5338 6874 4.952262 ATCATCCAACGTTGACATGAAG 57.048 40.909 30.39 18.31 33.71 3.02
5339 6875 4.759183 TGAATCATCCAACGTTGACATGAA 59.241 37.500 30.39 19.58 33.71 2.57
5340 6876 4.322567 TGAATCATCCAACGTTGACATGA 58.677 39.130 29.56 29.56 34.18 3.07
5341 6877 4.683501 TGAATCATCCAACGTTGACATG 57.316 40.909 29.35 26.01 0.00 3.21
5342 6878 5.703978 TTTGAATCATCCAACGTTGACAT 57.296 34.783 29.35 17.04 0.00 3.06
5343 6879 5.163612 TGTTTTGAATCATCCAACGTTGACA 60.164 36.000 29.35 16.82 0.00 3.58
5344 6880 5.173131 GTGTTTTGAATCATCCAACGTTGAC 59.827 40.000 29.35 14.50 0.00 3.18
5345 6881 5.163612 TGTGTTTTGAATCATCCAACGTTGA 60.164 36.000 29.35 15.43 0.00 3.18
5346 6882 5.039984 TGTGTTTTGAATCATCCAACGTTG 58.960 37.500 21.47 21.47 0.00 4.10
5347 6883 5.255710 TGTGTTTTGAATCATCCAACGTT 57.744 34.783 0.00 0.00 0.00 3.99
5348 6884 4.909696 TGTGTTTTGAATCATCCAACGT 57.090 36.364 0.00 0.00 0.00 3.99
5349 6885 9.566530 TTATAATGTGTTTTGAATCATCCAACG 57.433 29.630 0.00 0.00 0.00 4.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.