Multiple sequence alignment - TraesCS1A01G096300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G096300 chr1A 100.000 3327 0 0 1 3327 91601916 91605242 0.000000e+00 6144.0
1 TraesCS1A01G096300 chr1A 100.000 101 0 0 3762 3862 91605677 91605777 1.830000e-43 187.0
2 TraesCS1A01G096300 chr1B 89.600 2048 110 52 987 2975 156567559 156565556 0.000000e+00 2507.0
3 TraesCS1A01G096300 chr1B 91.076 381 22 6 610 982 156567987 156567611 4.450000e-139 505.0
4 TraesCS1A01G096300 chr1B 82.616 581 70 16 1 574 156569124 156568568 5.800000e-133 484.0
5 TraesCS1A01G096300 chr1D 87.949 2033 119 53 985 2921 97214469 97216471 0.000000e+00 2281.0
6 TraesCS1A01G096300 chr1D 89.529 382 15 11 610 983 97214073 97214437 9.780000e-126 460.0
7 TraesCS1A01G096300 chr1D 97.143 35 1 0 3826 3860 11203279 11203313 4.170000e-05 60.2
8 TraesCS1A01G096300 chr2A 86.139 101 12 2 3762 3861 768456506 768456407 1.470000e-19 108.0
9 TraesCS1A01G096300 chr3D 87.879 66 8 0 1485 1550 439680225 439680160 1.150000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G096300 chr1A 91601916 91605777 3861 False 3165.500000 6144 100.000 1 3862 2 chr1A.!!$F1 3861
1 TraesCS1A01G096300 chr1B 156565556 156569124 3568 True 1165.333333 2507 87.764 1 2975 3 chr1B.!!$R1 2974
2 TraesCS1A01G096300 chr1D 97214073 97216471 2398 False 1370.500000 2281 88.739 610 2921 2 chr1D.!!$F2 2311

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
434 438 0.038892 GCACAAAGACACCCATGCAG 60.039 55.0 0.00 0.0 33.27 4.41 F
1331 1969 0.109597 CAGTTCGAACAAGGGCATGC 60.110 55.0 28.78 9.9 0.00 4.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2218 2912 0.243907 TCGGAACCTTGAGAAGCTCG 59.756 55.0 0.0 0.0 32.35 5.03 R
3013 3732 0.030501 TGGGGGAGGACGGACAATAT 60.031 55.0 0.0 0.0 0.00 1.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.042520 GAACAAGACAACCACGCGCA 62.043 55.000 5.73 0.00 0.00 6.09
29 30 2.100216 CAACCACGCGCATAAGGC 59.900 61.111 5.73 0.00 39.90 4.35
51 52 2.749621 GTCCACCTTGCTTGGTTAGATG 59.250 50.000 0.00 0.00 38.45 2.90
55 56 3.379372 CACCTTGCTTGGTTAGATGATGG 59.621 47.826 0.00 0.00 38.45 3.51
57 58 3.379372 CCTTGCTTGGTTAGATGATGGTG 59.621 47.826 0.00 0.00 0.00 4.17
74 75 1.535444 TGGAAGCCGAAGACCTCCA 60.535 57.895 0.00 0.00 0.00 3.86
77 78 0.179070 GAAGCCGAAGACCTCCATCC 60.179 60.000 0.00 0.00 0.00 3.51
87 88 1.218047 CCTCCATCCGCTTGTCGAA 59.782 57.895 0.00 0.00 41.67 3.71
108 109 2.154462 ACTTTGTGATCCTTGAAGCCG 58.846 47.619 0.00 0.00 0.00 5.52
110 111 2.559698 TTGTGATCCTTGAAGCCGAA 57.440 45.000 0.00 0.00 0.00 4.30
149 150 0.257328 TGGTGTTGTGGTGGTGATGT 59.743 50.000 0.00 0.00 0.00 3.06
151 152 2.092375 TGGTGTTGTGGTGGTGATGTTA 60.092 45.455 0.00 0.00 0.00 2.41
191 192 1.205893 GTTGTGGGTTTGTTGGCTCAA 59.794 47.619 0.00 0.00 0.00 3.02
259 263 7.770201 TGTCTGTTTCTTCAATGAAATGAACA 58.230 30.769 13.78 13.78 38.09 3.18
274 278 5.446143 AATGAACACCGTTGCTTTTCATA 57.554 34.783 0.00 0.00 36.18 2.15
275 279 4.902443 TGAACACCGTTGCTTTTCATAA 57.098 36.364 0.00 0.00 0.00 1.90
312 316 9.582648 AATCTAGTTTGTGGTAAACTGGTAATT 57.417 29.630 13.59 6.28 40.38 1.40
313 317 8.983702 TCTAGTTTGTGGTAAACTGGTAATTT 57.016 30.769 13.59 0.00 40.38 1.82
314 318 9.059260 TCTAGTTTGTGGTAAACTGGTAATTTC 57.941 33.333 13.59 0.00 40.38 2.17
315 319 7.046292 AGTTTGTGGTAAACTGGTAATTTCC 57.954 36.000 4.41 0.00 38.88 3.13
316 320 6.837048 AGTTTGTGGTAAACTGGTAATTTCCT 59.163 34.615 4.41 0.00 38.88 3.36
326 330 2.224917 TGGTAATTTCCTCCGGTTTGCT 60.225 45.455 0.00 0.00 0.00 3.91
328 332 3.119602 GGTAATTTCCTCCGGTTTGCTTC 60.120 47.826 0.00 0.00 0.00 3.86
329 333 2.286365 ATTTCCTCCGGTTTGCTTCA 57.714 45.000 0.00 0.00 0.00 3.02
331 335 2.286365 TTCCTCCGGTTTGCTTCATT 57.714 45.000 0.00 0.00 0.00 2.57
332 336 1.533625 TCCTCCGGTTTGCTTCATTG 58.466 50.000 0.00 0.00 0.00 2.82
341 345 2.099062 GCTTCATTGGAGCGCACG 59.901 61.111 11.47 0.00 0.00 5.34
362 366 3.731136 GCACGTGGCAGAGAAACA 58.269 55.556 18.88 0.00 43.97 2.83
377 381 4.768448 AGAGAAACAATGGCATCATGTTGA 59.232 37.500 16.07 0.00 33.18 3.18
380 384 2.527497 ACAATGGCATCATGTTGACCA 58.473 42.857 16.92 16.92 33.18 4.02
381 385 2.494471 ACAATGGCATCATGTTGACCAG 59.506 45.455 18.47 11.94 33.03 4.00
399 403 2.046314 GGACCACCCACACCATCG 60.046 66.667 0.00 0.00 34.14 3.84
403 407 2.434185 CACCCACACCATCGGTCG 60.434 66.667 0.00 0.00 31.02 4.79
407 411 2.358125 CACACCATCGGTCGGCAA 60.358 61.111 0.00 0.00 31.02 4.52
423 427 0.041663 GCAACGCGTTAGCACAAAGA 60.042 50.000 28.88 0.00 45.49 2.52
434 438 0.038892 GCACAAAGACACCCATGCAG 60.039 55.000 0.00 0.00 33.27 4.41
451 455 0.464036 CAGCATGCATGATGGCCTTT 59.536 50.000 32.30 4.65 40.30 3.11
452 456 1.134521 CAGCATGCATGATGGCCTTTT 60.135 47.619 32.30 0.00 40.30 2.27
453 457 1.138266 AGCATGCATGATGGCCTTTTC 59.862 47.619 30.64 8.13 31.99 2.29
465 469 0.884704 GCCTTTTCAGTGCTCCACGA 60.885 55.000 0.00 0.00 39.64 4.35
470 474 3.610040 TTTCAGTGCTCCACGATGTAT 57.390 42.857 0.00 0.00 39.64 2.29
472 476 4.937201 TTCAGTGCTCCACGATGTATAT 57.063 40.909 0.00 0.00 39.64 0.86
479 483 4.220602 TGCTCCACGATGTATATGTGCTAT 59.779 41.667 0.00 0.00 32.32 2.97
480 484 5.417580 TGCTCCACGATGTATATGTGCTATA 59.582 40.000 0.00 0.00 32.32 1.31
485 489 9.131791 TCCACGATGTATATGTGCTATATGTAT 57.868 33.333 0.00 0.75 32.32 2.29
552 557 8.763984 AGGAAGAAAGCATTTTATGATGATCT 57.236 30.769 0.00 0.00 39.27 2.75
553 558 8.848182 AGGAAGAAAGCATTTTATGATGATCTC 58.152 33.333 0.00 0.00 39.27 2.75
554 559 7.802251 GGAAGAAAGCATTTTATGATGATCTCG 59.198 37.037 0.00 0.00 39.27 4.04
555 560 8.442632 AAGAAAGCATTTTATGATGATCTCGA 57.557 30.769 0.00 0.00 39.27 4.04
559 564 9.859427 AAAGCATTTTATGATGATCTCGAAAAA 57.141 25.926 0.00 1.75 31.62 1.94
582 594 1.343821 GATGCTAAACGCGTGGACG 59.656 57.895 14.98 2.77 43.27 4.79
597 609 4.491924 GCGTGGACGTATGTAAAATGACTG 60.492 45.833 0.52 0.00 42.22 3.51
598 610 4.624024 CGTGGACGTATGTAAAATGACTGT 59.376 41.667 0.00 0.00 34.11 3.55
599 611 5.220154 CGTGGACGTATGTAAAATGACTGTC 60.220 44.000 0.00 0.00 34.11 3.51
605 617 6.483974 ACGTATGTAAAATGACTGTCAACCAA 59.516 34.615 15.31 0.00 0.00 3.67
606 618 7.174253 ACGTATGTAAAATGACTGTCAACCAAT 59.826 33.333 15.31 6.89 0.00 3.16
607 619 7.481483 CGTATGTAAAATGACTGTCAACCAATG 59.519 37.037 15.31 1.68 0.00 2.82
608 620 5.527951 TGTAAAATGACTGTCAACCAATGC 58.472 37.500 15.31 4.45 0.00 3.56
614 1164 2.162408 GACTGTCAACCAATGCTAAGCC 59.838 50.000 2.24 0.00 0.00 4.35
618 1168 0.456653 CAACCAATGCTAAGCCGTGC 60.457 55.000 0.00 0.00 0.00 5.34
644 1194 2.607038 CGATTCCGATTCTGCATCCGTA 60.607 50.000 0.00 0.00 38.22 4.02
646 1196 1.107945 TCCGATTCTGCATCCGTACA 58.892 50.000 0.00 0.00 0.00 2.90
647 1197 1.686587 TCCGATTCTGCATCCGTACAT 59.313 47.619 0.00 0.00 0.00 2.29
648 1198 1.794701 CCGATTCTGCATCCGTACATG 59.205 52.381 0.00 0.00 0.00 3.21
690 1244 1.665169 CGCCATATATAGCGCATGCAA 59.335 47.619 19.57 2.29 46.50 4.08
814 1370 0.508641 CGGGAAGATATTCGCTTGCG 59.491 55.000 14.27 8.87 34.92 4.85
826 1382 2.333938 CTTGCGTGCTTGCTTGCT 59.666 55.556 9.97 0.00 35.36 3.91
827 1383 1.728426 CTTGCGTGCTTGCTTGCTC 60.728 57.895 9.97 0.00 35.36 4.26
850 1406 1.742411 CGCACCCATAGATTTGTCGGT 60.742 52.381 0.00 0.00 0.00 4.69
858 1414 4.034394 CCATAGATTTGTCGGTCACATGTG 59.966 45.833 20.18 20.18 33.90 3.21
862 1418 1.577468 TTGTCGGTCACATGTGTCAC 58.423 50.000 24.63 16.30 33.90 3.67
913 1469 0.908198 ATTGCCTGTCAGTCCTCTCC 59.092 55.000 0.00 0.00 0.00 3.71
952 1508 1.739562 GCCCGTGCAACTCTCTCTG 60.740 63.158 0.00 0.00 37.47 3.35
964 1523 2.028203 ACTCTCTCTGCTTTCTTCTGCC 60.028 50.000 0.00 0.00 0.00 4.85
983 1542 2.226330 CCGCTGCTCACTCTAGTAGAT 58.774 52.381 0.00 0.00 31.46 1.98
1091 1697 4.176271 CTGATCACTAGCACATTCGTCAA 58.824 43.478 0.00 0.00 0.00 3.18
1099 1705 3.990092 AGCACATTCGTCAACTCTGTTA 58.010 40.909 0.00 0.00 0.00 2.41
1105 1724 5.571741 ACATTCGTCAACTCTGTTACATACG 59.428 40.000 0.00 0.00 0.00 3.06
1106 1725 3.495193 TCGTCAACTCTGTTACATACGC 58.505 45.455 0.00 0.00 0.00 4.42
1108 1727 2.027688 GTCAACTCTGTTACATACGCGC 59.972 50.000 5.73 0.00 0.00 6.86
1130 1749 4.182693 TCGATTTCGATGTTGTGTACCT 57.817 40.909 0.00 0.00 44.22 3.08
1132 1751 3.924073 CGATTTCGATGTTGTGTACCTCA 59.076 43.478 0.00 0.00 43.02 3.86
1133 1752 4.031765 CGATTTCGATGTTGTGTACCTCAG 59.968 45.833 0.00 0.00 43.02 3.35
1134 1753 4.330944 TTTCGATGTTGTGTACCTCAGT 57.669 40.909 0.00 0.00 0.00 3.41
1135 1754 4.330944 TTCGATGTTGTGTACCTCAGTT 57.669 40.909 0.00 0.00 0.00 3.16
1136 1755 4.330944 TCGATGTTGTGTACCTCAGTTT 57.669 40.909 0.00 0.00 0.00 2.66
1137 1756 4.304110 TCGATGTTGTGTACCTCAGTTTC 58.696 43.478 0.00 0.00 0.00 2.78
1138 1757 4.038763 TCGATGTTGTGTACCTCAGTTTCT 59.961 41.667 0.00 0.00 0.00 2.52
1139 1758 4.150627 CGATGTTGTGTACCTCAGTTTCTG 59.849 45.833 0.00 0.00 0.00 3.02
1140 1759 4.481368 TGTTGTGTACCTCAGTTTCTGT 57.519 40.909 0.00 0.00 32.61 3.41
1142 1761 5.597806 TGTTGTGTACCTCAGTTTCTGTAG 58.402 41.667 0.00 0.00 32.61 2.74
1143 1762 4.252971 TGTGTACCTCAGTTTCTGTAGC 57.747 45.455 0.00 0.00 32.61 3.58
1144 1763 3.243336 GTGTACCTCAGTTTCTGTAGCG 58.757 50.000 0.00 0.00 32.61 4.26
1145 1764 2.230508 TGTACCTCAGTTTCTGTAGCGG 59.769 50.000 0.00 0.00 32.61 5.52
1227 1856 4.268405 CACATGTGCAGAAACTGTTTTTCC 59.732 41.667 13.94 0.00 33.43 3.13
1301 1939 7.041780 ACACATGATGTTTACTGAACTTGTCTC 60.042 37.037 0.00 0.00 38.98 3.36
1311 1949 6.849085 ACTGAACTTGTCTCTACTGATCAT 57.151 37.500 0.00 0.00 0.00 2.45
1329 1967 2.086869 CATCAGTTCGAACAAGGGCAT 58.913 47.619 28.78 4.57 0.00 4.40
1330 1968 1.522668 TCAGTTCGAACAAGGGCATG 58.477 50.000 28.78 16.51 0.00 4.06
1331 1969 0.109597 CAGTTCGAACAAGGGCATGC 60.110 55.000 28.78 9.90 0.00 4.06
1409 2051 3.720949 TCCAAAGGTATGGATACGACG 57.279 47.619 0.00 0.00 44.52 5.12
1440 2086 1.978712 CTCCAGTGCATTCAGCTGCG 61.979 60.000 9.47 0.59 45.30 5.18
1444 2090 1.135489 CAGTGCATTCAGCTGCGAAAT 60.135 47.619 9.47 0.42 45.30 2.17
1445 2091 2.096335 CAGTGCATTCAGCTGCGAAATA 59.904 45.455 9.47 0.00 45.30 1.40
1446 2092 2.096496 AGTGCATTCAGCTGCGAAATAC 59.904 45.455 9.47 3.89 45.30 1.89
1447 2093 1.062440 TGCATTCAGCTGCGAAATACG 59.938 47.619 9.47 0.00 45.30 3.06
1448 2094 1.595489 GCATTCAGCTGCGAAATACGG 60.595 52.381 9.47 0.00 40.54 4.02
1449 2095 1.933181 CATTCAGCTGCGAAATACGGA 59.067 47.619 9.47 0.00 42.83 4.69
1468 2114 6.727824 ACGGAGTATTTGTGATTTCTTCTG 57.272 37.500 0.00 0.00 41.94 3.02
1483 2135 6.867662 TTTCTTCTGATTCTTGGTTGACTC 57.132 37.500 0.00 0.00 0.00 3.36
1577 2229 4.465632 ACTGTAGTGCGATCATTTGGTA 57.534 40.909 0.00 0.00 0.00 3.25
1578 2230 4.827692 ACTGTAGTGCGATCATTTGGTAA 58.172 39.130 0.00 0.00 0.00 2.85
1579 2231 5.242434 ACTGTAGTGCGATCATTTGGTAAA 58.758 37.500 0.00 0.00 0.00 2.01
1580 2232 5.121768 ACTGTAGTGCGATCATTTGGTAAAC 59.878 40.000 0.00 0.00 0.00 2.01
1581 2233 4.998033 TGTAGTGCGATCATTTGGTAAACA 59.002 37.500 0.00 0.00 0.00 2.83
1582 2234 5.470437 TGTAGTGCGATCATTTGGTAAACAA 59.530 36.000 0.00 0.00 37.28 2.83
1584 2236 6.751514 AGTGCGATCATTTGGTAAACAATA 57.248 33.333 0.00 0.00 39.21 1.90
1585 2237 7.333528 AGTGCGATCATTTGGTAAACAATAT 57.666 32.000 0.00 0.00 39.21 1.28
1587 2239 5.976534 TGCGATCATTTGGTAAACAATATGC 59.023 36.000 0.00 0.00 39.21 3.14
1591 2251 6.219417 TCATTTGGTAAACAATATGCCAGG 57.781 37.500 0.00 0.00 39.21 4.45
1604 2264 6.101150 ACAATATGCCAGGAGTACAAGGATTA 59.899 38.462 0.00 0.00 0.00 1.75
1605 2265 4.696479 ATGCCAGGAGTACAAGGATTAG 57.304 45.455 0.00 0.00 0.00 1.73
1732 2392 1.287425 GTGCTCGCCAACAGGTATAC 58.713 55.000 0.00 0.00 0.00 1.47
1786 2452 5.710099 ACAGAATTCATTCCCGTATGTTGTT 59.290 36.000 8.44 0.00 37.51 2.83
1868 2540 2.626840 GACCAGCCTGATTCAGAGAAC 58.373 52.381 15.36 2.08 32.44 3.01
1874 2546 2.737039 GCCTGATTCAGAGAACGGAGAC 60.737 54.545 15.36 0.00 32.44 3.36
1876 2548 2.478709 CTGATTCAGAGAACGGAGACGG 60.479 54.545 8.00 0.00 46.82 4.79
1878 2550 5.689375 CTGATTCAGAGAACGGAGACGGTA 61.689 50.000 8.00 0.00 45.11 4.02
1918 2593 3.181329 TGTCCAGGGATTGCTTCTTCTA 58.819 45.455 0.00 0.00 0.00 2.10
1922 2597 5.298026 GTCCAGGGATTGCTTCTTCTATTTC 59.702 44.000 0.00 0.00 0.00 2.17
1959 2638 0.905357 ACCATTTCTCGGTCTCCAGG 59.095 55.000 0.00 0.00 27.30 4.45
2016 2695 3.368571 GGAGCACCACAAGCAGGC 61.369 66.667 0.00 0.00 35.97 4.85
2249 2943 0.594284 GGTTCCGACCATCGATCGTC 60.594 60.000 15.94 12.58 45.77 4.20
2311 3007 1.205893 TGGGTTGAGCAAACACCAAAC 59.794 47.619 0.24 0.00 41.95 2.93
2314 3010 2.539476 GTTGAGCAAACACCAAACAGG 58.461 47.619 0.00 0.00 45.67 4.00
2354 3057 2.357034 ACGTGCGTCCATGACACC 60.357 61.111 0.00 0.00 32.09 4.16
2424 3127 0.385751 ACAGTATCGATGTCCTGCGG 59.614 55.000 8.54 0.00 0.00 5.69
2522 3225 3.458163 GGCAGGATCGTCGTCCCA 61.458 66.667 9.39 0.00 39.17 4.37
2666 3377 2.437359 GCGCTTCAGATGCAGGGT 60.437 61.111 0.00 0.00 0.00 4.34
2667 3378 2.042831 GCGCTTCAGATGCAGGGTT 61.043 57.895 0.00 0.00 0.00 4.11
2702 3421 0.036010 CCCGGTGATCTGCTGTTTCT 60.036 55.000 0.00 0.00 0.00 2.52
2791 3510 4.363990 AGCGGTGCTCGTGGTCAG 62.364 66.667 0.00 0.00 41.72 3.51
2867 3586 1.070289 ACCGGAGTGAACTGAGTTTCC 59.930 52.381 9.46 1.66 0.00 3.13
2879 3598 1.691976 TGAGTTTCCACAGTCGGACAT 59.308 47.619 11.27 0.00 33.75 3.06
2880 3599 2.894765 TGAGTTTCCACAGTCGGACATA 59.105 45.455 11.27 0.00 33.75 2.29
2881 3600 3.513912 TGAGTTTCCACAGTCGGACATAT 59.486 43.478 11.27 0.00 33.75 1.78
2927 3646 6.680874 AAGAGAACGTAGTACTATGGACTG 57.319 41.667 22.97 5.69 45.00 3.51
2931 3650 6.060136 AGAACGTAGTACTATGGACTGCATA 58.940 40.000 22.97 0.00 45.00 3.14
2940 3659 6.239217 ACTATGGACTGCATATGAACTGAA 57.761 37.500 6.97 0.00 0.00 3.02
2941 3660 6.653020 ACTATGGACTGCATATGAACTGAAA 58.347 36.000 6.97 0.00 0.00 2.69
2942 3661 7.285566 ACTATGGACTGCATATGAACTGAAAT 58.714 34.615 6.97 0.00 0.00 2.17
2996 3715 9.916360 CTTTATCCCTACTACTTAAAAATGGGT 57.084 33.333 0.00 0.00 35.20 4.51
2999 3718 7.811482 TCCCTACTACTTAAAAATGGGTACA 57.189 36.000 0.00 0.00 35.20 2.90
3000 3719 8.217188 TCCCTACTACTTAAAAATGGGTACAA 57.783 34.615 0.00 0.00 35.20 2.41
3001 3720 8.102676 TCCCTACTACTTAAAAATGGGTACAAC 58.897 37.037 0.00 0.00 35.20 3.32
3002 3721 7.064966 CCCTACTACTTAAAAATGGGTACAACG 59.935 40.741 0.00 0.00 0.00 4.10
3003 3722 7.603784 CCTACTACTTAAAAATGGGTACAACGT 59.396 37.037 0.00 0.00 0.00 3.99
3004 3723 7.425577 ACTACTTAAAAATGGGTACAACGTC 57.574 36.000 0.00 0.00 0.00 4.34
3005 3724 5.694231 ACTTAAAAATGGGTACAACGTCC 57.306 39.130 0.00 0.00 0.00 4.79
3006 3725 5.379187 ACTTAAAAATGGGTACAACGTCCT 58.621 37.500 0.00 0.00 0.00 3.85
3007 3726 5.239963 ACTTAAAAATGGGTACAACGTCCTG 59.760 40.000 0.00 0.00 0.00 3.86
3008 3727 1.530323 AAATGGGTACAACGTCCTGC 58.470 50.000 0.00 0.00 0.00 4.85
3009 3728 0.322187 AATGGGTACAACGTCCTGCC 60.322 55.000 0.00 0.00 0.00 4.85
3010 3729 2.433664 GGGTACAACGTCCTGCCG 60.434 66.667 0.00 0.00 0.00 5.69
3011 3730 2.341176 GGTACAACGTCCTGCCGT 59.659 61.111 0.00 0.00 44.23 5.68
3012 3731 1.586028 GGTACAACGTCCTGCCGTA 59.414 57.895 0.00 0.00 40.85 4.02
3013 3732 0.038343 GGTACAACGTCCTGCCGTAA 60.038 55.000 0.00 0.00 40.85 3.18
3014 3733 1.404583 GGTACAACGTCCTGCCGTAAT 60.405 52.381 0.00 0.00 40.85 1.89
3015 3734 2.159254 GGTACAACGTCCTGCCGTAATA 60.159 50.000 0.00 0.00 40.85 0.98
3016 3735 2.973694 ACAACGTCCTGCCGTAATAT 57.026 45.000 0.00 0.00 40.85 1.28
3017 3736 3.255969 ACAACGTCCTGCCGTAATATT 57.744 42.857 0.00 0.00 40.85 1.28
3018 3737 2.933906 ACAACGTCCTGCCGTAATATTG 59.066 45.455 0.00 0.00 40.85 1.90
3019 3738 2.933906 CAACGTCCTGCCGTAATATTGT 59.066 45.455 0.00 0.00 40.85 2.71
3020 3739 2.817901 ACGTCCTGCCGTAATATTGTC 58.182 47.619 0.00 0.00 39.73 3.18
3021 3740 2.132762 CGTCCTGCCGTAATATTGTCC 58.867 52.381 0.00 0.00 0.00 4.02
3022 3741 2.132762 GTCCTGCCGTAATATTGTCCG 58.867 52.381 0.00 0.00 0.00 4.79
3023 3742 1.758280 TCCTGCCGTAATATTGTCCGT 59.242 47.619 0.00 0.00 0.00 4.69
3024 3743 2.132762 CCTGCCGTAATATTGTCCGTC 58.867 52.381 0.00 0.00 0.00 4.79
3025 3744 2.132762 CTGCCGTAATATTGTCCGTCC 58.867 52.381 0.00 0.00 0.00 4.79
3026 3745 1.758280 TGCCGTAATATTGTCCGTCCT 59.242 47.619 0.00 0.00 0.00 3.85
3027 3746 2.223876 TGCCGTAATATTGTCCGTCCTC 60.224 50.000 0.00 0.00 0.00 3.71
3028 3747 2.865276 GCCGTAATATTGTCCGTCCTCC 60.865 54.545 0.00 0.00 0.00 4.30
3029 3748 2.288640 CCGTAATATTGTCCGTCCTCCC 60.289 54.545 0.00 0.00 0.00 4.30
3030 3749 2.288640 CGTAATATTGTCCGTCCTCCCC 60.289 54.545 0.00 0.00 0.00 4.81
3031 3750 1.137697 AATATTGTCCGTCCTCCCCC 58.862 55.000 0.00 0.00 0.00 5.40
3032 3751 0.030501 ATATTGTCCGTCCTCCCCCA 60.031 55.000 0.00 0.00 0.00 4.96
3033 3752 0.979187 TATTGTCCGTCCTCCCCCAC 60.979 60.000 0.00 0.00 0.00 4.61
3042 3761 2.933834 CTCCCCCACCCTCGGTTT 60.934 66.667 0.00 0.00 31.02 3.27
3043 3762 2.450897 TCCCCCACCCTCGGTTTT 60.451 61.111 0.00 0.00 31.02 2.43
3044 3763 2.076597 CTCCCCCACCCTCGGTTTTT 62.077 60.000 0.00 0.00 31.02 1.94
3045 3764 1.605451 CCCCCACCCTCGGTTTTTC 60.605 63.158 0.00 0.00 31.02 2.29
3046 3765 1.969589 CCCCACCCTCGGTTTTTCG 60.970 63.158 0.00 0.00 31.02 3.46
3047 3766 1.071814 CCCACCCTCGGTTTTTCGA 59.928 57.895 0.00 0.00 31.02 3.71
3048 3767 0.322187 CCCACCCTCGGTTTTTCGAT 60.322 55.000 0.00 0.00 38.55 3.59
3049 3768 1.084289 CCACCCTCGGTTTTTCGATC 58.916 55.000 0.00 0.00 38.55 3.69
3050 3769 1.084289 CACCCTCGGTTTTTCGATCC 58.916 55.000 0.00 0.00 38.55 3.36
3051 3770 0.688487 ACCCTCGGTTTTTCGATCCA 59.312 50.000 0.00 0.00 38.55 3.41
3052 3771 1.072648 ACCCTCGGTTTTTCGATCCAA 59.927 47.619 0.00 0.00 38.55 3.53
3053 3772 1.467342 CCCTCGGTTTTTCGATCCAAC 59.533 52.381 0.00 0.00 38.55 3.77
3054 3773 1.127951 CCTCGGTTTTTCGATCCAACG 59.872 52.381 0.00 0.00 38.55 4.10
3055 3774 1.796459 CTCGGTTTTTCGATCCAACGT 59.204 47.619 0.00 0.00 38.55 3.99
3056 3775 1.794116 TCGGTTTTTCGATCCAACGTC 59.206 47.619 0.00 0.00 33.92 4.34
3057 3776 1.136169 CGGTTTTTCGATCCAACGTCC 60.136 52.381 0.00 0.00 34.70 4.79
3058 3777 2.148768 GGTTTTTCGATCCAACGTCCT 58.851 47.619 0.00 0.00 34.70 3.85
3059 3778 2.159037 GGTTTTTCGATCCAACGTCCTC 59.841 50.000 0.00 0.00 34.70 3.71
3060 3779 3.064931 GTTTTTCGATCCAACGTCCTCT 58.935 45.455 0.00 0.00 34.70 3.69
3061 3780 2.649331 TTTCGATCCAACGTCCTCTC 57.351 50.000 0.00 0.00 34.70 3.20
3062 3781 0.450583 TTCGATCCAACGTCCTCTCG 59.549 55.000 0.00 0.00 34.70 4.04
3063 3782 0.675837 TCGATCCAACGTCCTCTCGT 60.676 55.000 9.40 0.00 46.19 4.18
3070 3789 2.626582 ACGTCCTCTCGTTTCGACT 58.373 52.632 0.00 0.00 41.37 4.18
3071 3790 0.950116 ACGTCCTCTCGTTTCGACTT 59.050 50.000 0.00 0.00 41.37 3.01
3072 3791 1.336125 ACGTCCTCTCGTTTCGACTTT 59.664 47.619 0.00 0.00 41.37 2.66
3073 3792 2.223665 ACGTCCTCTCGTTTCGACTTTT 60.224 45.455 0.00 0.00 41.37 2.27
3074 3793 2.153247 CGTCCTCTCGTTTCGACTTTTG 59.847 50.000 0.00 0.00 0.00 2.44
3075 3794 3.121544 GTCCTCTCGTTTCGACTTTTGT 58.878 45.455 0.00 0.00 0.00 2.83
3076 3795 3.554731 GTCCTCTCGTTTCGACTTTTGTT 59.445 43.478 0.00 0.00 0.00 2.83
3077 3796 3.554324 TCCTCTCGTTTCGACTTTTGTTG 59.446 43.478 0.00 0.00 35.14 3.33
3078 3797 3.303132 CCTCTCGTTTCGACTTTTGTTGG 60.303 47.826 0.00 0.00 34.59 3.77
3079 3798 3.264104 TCTCGTTTCGACTTTTGTTGGT 58.736 40.909 0.00 0.00 34.59 3.67
3080 3799 3.062909 TCTCGTTTCGACTTTTGTTGGTG 59.937 43.478 0.00 0.00 34.59 4.17
3081 3800 2.096174 TCGTTTCGACTTTTGTTGGTGG 59.904 45.455 0.00 0.00 34.59 4.61
3082 3801 2.096174 CGTTTCGACTTTTGTTGGTGGA 59.904 45.455 0.00 0.00 34.59 4.02
3083 3802 3.431856 GTTTCGACTTTTGTTGGTGGAC 58.568 45.455 0.00 0.00 34.59 4.02
3084 3803 1.670791 TCGACTTTTGTTGGTGGACC 58.329 50.000 0.00 0.00 34.59 4.46
3085 3804 0.666374 CGACTTTTGTTGGTGGACCC 59.334 55.000 0.00 0.00 34.29 4.46
3086 3805 1.749286 CGACTTTTGTTGGTGGACCCT 60.749 52.381 0.00 0.00 34.29 4.34
3087 3806 2.384828 GACTTTTGTTGGTGGACCCTT 58.615 47.619 0.00 0.00 34.29 3.95
3088 3807 2.764010 GACTTTTGTTGGTGGACCCTTT 59.236 45.455 0.00 0.00 34.29 3.11
3089 3808 3.178046 ACTTTTGTTGGTGGACCCTTTT 58.822 40.909 0.00 0.00 34.29 2.27
3090 3809 4.354662 ACTTTTGTTGGTGGACCCTTTTA 58.645 39.130 0.00 0.00 34.29 1.52
3091 3810 4.966168 ACTTTTGTTGGTGGACCCTTTTAT 59.034 37.500 0.00 0.00 34.29 1.40
3092 3811 5.427157 ACTTTTGTTGGTGGACCCTTTTATT 59.573 36.000 0.00 0.00 34.29 1.40
3093 3812 6.612049 ACTTTTGTTGGTGGACCCTTTTATTA 59.388 34.615 0.00 0.00 34.29 0.98
3094 3813 6.408107 TTTGTTGGTGGACCCTTTTATTAC 57.592 37.500 0.00 0.00 34.29 1.89
3095 3814 4.409187 TGTTGGTGGACCCTTTTATTACC 58.591 43.478 0.00 0.00 34.29 2.85
3096 3815 4.140994 TGTTGGTGGACCCTTTTATTACCA 60.141 41.667 0.00 0.00 35.14 3.25
3097 3816 4.743705 TGGTGGACCCTTTTATTACCAA 57.256 40.909 0.00 0.00 34.12 3.67
3098 3817 4.668636 TGGTGGACCCTTTTATTACCAAG 58.331 43.478 0.00 0.00 34.12 3.61
3099 3818 3.446161 GGTGGACCCTTTTATTACCAAGC 59.554 47.826 0.00 0.00 0.00 4.01
3100 3819 3.446161 GTGGACCCTTTTATTACCAAGCC 59.554 47.826 0.00 0.00 0.00 4.35
3101 3820 3.076182 TGGACCCTTTTATTACCAAGCCA 59.924 43.478 0.00 0.00 0.00 4.75
3102 3821 4.090819 GGACCCTTTTATTACCAAGCCAA 58.909 43.478 0.00 0.00 0.00 4.52
3103 3822 4.081862 GGACCCTTTTATTACCAAGCCAAC 60.082 45.833 0.00 0.00 0.00 3.77
3104 3823 3.508402 ACCCTTTTATTACCAAGCCAACG 59.492 43.478 0.00 0.00 0.00 4.10
3105 3824 3.759618 CCCTTTTATTACCAAGCCAACGA 59.240 43.478 0.00 0.00 0.00 3.85
3106 3825 4.380128 CCCTTTTATTACCAAGCCAACGAC 60.380 45.833 0.00 0.00 0.00 4.34
3107 3826 4.380128 CCTTTTATTACCAAGCCAACGACC 60.380 45.833 0.00 0.00 0.00 4.79
3108 3827 2.012937 TATTACCAAGCCAACGACCG 57.987 50.000 0.00 0.00 0.00 4.79
3109 3828 1.303091 ATTACCAAGCCAACGACCGC 61.303 55.000 0.00 0.00 0.00 5.68
3110 3829 3.887335 TACCAAGCCAACGACCGCC 62.887 63.158 0.00 0.00 0.00 6.13
3135 3854 4.752879 GCGCCAAGCTCCGGTGTA 62.753 66.667 15.09 0.00 44.04 2.90
3136 3855 2.047655 CGCCAAGCTCCGGTGTAA 60.048 61.111 0.00 0.00 0.00 2.41
3137 3856 2.388232 CGCCAAGCTCCGGTGTAAC 61.388 63.158 0.00 0.00 0.00 2.50
3167 3886 4.458829 TCCCCGCTCCCTCGTCAT 62.459 66.667 0.00 0.00 0.00 3.06
3168 3887 3.470888 CCCCGCTCCCTCGTCATT 61.471 66.667 0.00 0.00 0.00 2.57
3169 3888 2.107141 CCCGCTCCCTCGTCATTC 59.893 66.667 0.00 0.00 0.00 2.67
3170 3889 2.427245 CCCGCTCCCTCGTCATTCT 61.427 63.158 0.00 0.00 0.00 2.40
3171 3890 1.517832 CCGCTCCCTCGTCATTCTT 59.482 57.895 0.00 0.00 0.00 2.52
3172 3891 0.528684 CCGCTCCCTCGTCATTCTTC 60.529 60.000 0.00 0.00 0.00 2.87
3173 3892 0.173481 CGCTCCCTCGTCATTCTTCA 59.827 55.000 0.00 0.00 0.00 3.02
3174 3893 1.404181 CGCTCCCTCGTCATTCTTCAA 60.404 52.381 0.00 0.00 0.00 2.69
3175 3894 2.275318 GCTCCCTCGTCATTCTTCAAG 58.725 52.381 0.00 0.00 0.00 3.02
3176 3895 2.354203 GCTCCCTCGTCATTCTTCAAGT 60.354 50.000 0.00 0.00 0.00 3.16
3177 3896 3.257393 CTCCCTCGTCATTCTTCAAGTG 58.743 50.000 0.00 0.00 0.00 3.16
3178 3897 1.734465 CCCTCGTCATTCTTCAAGTGC 59.266 52.381 0.00 0.00 0.00 4.40
3179 3898 1.734465 CCTCGTCATTCTTCAAGTGCC 59.266 52.381 0.00 0.00 0.00 5.01
3180 3899 1.391485 CTCGTCATTCTTCAAGTGCCG 59.609 52.381 0.00 0.00 0.00 5.69
3181 3900 1.148310 CGTCATTCTTCAAGTGCCGT 58.852 50.000 0.00 0.00 0.00 5.68
3182 3901 1.126846 CGTCATTCTTCAAGTGCCGTC 59.873 52.381 0.00 0.00 0.00 4.79
3183 3902 1.126846 GTCATTCTTCAAGTGCCGTCG 59.873 52.381 0.00 0.00 0.00 5.12
3184 3903 1.000394 TCATTCTTCAAGTGCCGTCGA 60.000 47.619 0.00 0.00 0.00 4.20
3185 3904 2.002586 CATTCTTCAAGTGCCGTCGAT 58.997 47.619 0.00 0.00 0.00 3.59
3186 3905 1.428448 TTCTTCAAGTGCCGTCGATG 58.572 50.000 0.00 0.00 0.00 3.84
3187 3906 0.389817 TCTTCAAGTGCCGTCGATGG 60.390 55.000 19.87 19.87 0.00 3.51
3188 3907 0.389817 CTTCAAGTGCCGTCGATGGA 60.390 55.000 28.06 9.67 0.00 3.41
3189 3908 0.249120 TTCAAGTGCCGTCGATGGAT 59.751 50.000 28.06 9.21 0.00 3.41
3190 3909 0.460109 TCAAGTGCCGTCGATGGATG 60.460 55.000 28.06 17.97 0.00 3.51
3191 3910 0.740868 CAAGTGCCGTCGATGGATGT 60.741 55.000 28.06 7.06 0.00 3.06
3192 3911 0.036388 AAGTGCCGTCGATGGATGTT 60.036 50.000 28.06 12.80 0.00 2.71
3193 3912 0.740868 AGTGCCGTCGATGGATGTTG 60.741 55.000 28.06 0.00 0.00 3.33
3194 3913 2.106074 TGCCGTCGATGGATGTTGC 61.106 57.895 28.06 10.92 0.00 4.17
3195 3914 2.823829 GCCGTCGATGGATGTTGCC 61.824 63.158 28.06 3.55 0.00 4.52
3196 3915 1.153369 CCGTCGATGGATGTTGCCT 60.153 57.895 19.48 0.00 0.00 4.75
3197 3916 0.744414 CCGTCGATGGATGTTGCCTT 60.744 55.000 19.48 0.00 0.00 4.35
3198 3917 0.652592 CGTCGATGGATGTTGCCTTC 59.347 55.000 0.00 0.00 0.00 3.46
3199 3918 1.737838 GTCGATGGATGTTGCCTTCA 58.262 50.000 0.00 0.00 33.05 3.02
3200 3919 1.398390 GTCGATGGATGTTGCCTTCAC 59.602 52.381 0.00 0.00 33.05 3.18
3201 3920 0.734889 CGATGGATGTTGCCTTCACC 59.265 55.000 0.00 0.00 33.05 4.02
3202 3921 0.734889 GATGGATGTTGCCTTCACCG 59.265 55.000 0.00 0.00 33.54 4.94
3203 3922 1.315257 ATGGATGTTGCCTTCACCGC 61.315 55.000 0.00 0.00 0.00 5.68
3204 3923 1.971167 GGATGTTGCCTTCACCGCA 60.971 57.895 0.00 0.00 0.00 5.69
3205 3924 1.315257 GGATGTTGCCTTCACCGCAT 61.315 55.000 0.00 0.00 35.83 4.73
3206 3925 0.527565 GATGTTGCCTTCACCGCATT 59.472 50.000 0.00 0.00 35.83 3.56
3207 3926 0.527565 ATGTTGCCTTCACCGCATTC 59.472 50.000 0.00 0.00 35.83 2.67
3208 3927 1.154225 GTTGCCTTCACCGCATTCG 60.154 57.895 0.00 0.00 35.83 3.34
3209 3928 1.302112 TTGCCTTCACCGCATTCGA 60.302 52.632 0.00 0.00 35.83 3.71
3210 3929 1.573829 TTGCCTTCACCGCATTCGAC 61.574 55.000 0.00 0.00 35.83 4.20
3211 3930 3.081133 CCTTCACCGCATTCGACG 58.919 61.111 0.00 0.00 38.10 5.12
3227 3946 4.678269 CGGACGTCGTCGCACACT 62.678 66.667 18.61 0.00 41.18 3.55
3228 3947 2.799916 GGACGTCGTCGCACACTC 60.800 66.667 18.61 0.00 41.18 3.51
3229 3948 3.157523 GACGTCGTCGCACACTCG 61.158 66.667 10.05 0.00 41.18 4.18
3230 3949 4.678269 ACGTCGTCGCACACTCGG 62.678 66.667 0.99 0.00 41.18 4.63
3232 3951 4.702081 GTCGTCGCACACTCGGCT 62.702 66.667 0.00 0.00 30.91 5.52
3233 3952 4.400109 TCGTCGCACACTCGGCTC 62.400 66.667 0.00 0.00 30.91 4.70
3234 3953 4.700365 CGTCGCACACTCGGCTCA 62.700 66.667 0.00 0.00 30.91 4.26
3235 3954 2.807045 GTCGCACACTCGGCTCAG 60.807 66.667 0.00 0.00 0.00 3.35
3236 3955 4.056125 TCGCACACTCGGCTCAGG 62.056 66.667 0.00 0.00 0.00 3.86
3237 3956 4.056125 CGCACACTCGGCTCAGGA 62.056 66.667 0.00 0.00 0.00 3.86
3238 3957 2.343758 GCACACTCGGCTCAGGAA 59.656 61.111 0.00 0.00 0.00 3.36
3239 3958 1.301716 GCACACTCGGCTCAGGAAA 60.302 57.895 0.00 0.00 0.00 3.13
3240 3959 1.294659 GCACACTCGGCTCAGGAAAG 61.295 60.000 0.00 0.00 0.00 2.62
3241 3960 0.318441 CACACTCGGCTCAGGAAAGA 59.682 55.000 0.00 0.00 0.00 2.52
3242 3961 0.605589 ACACTCGGCTCAGGAAAGAG 59.394 55.000 0.00 0.00 38.68 2.85
3243 3962 0.605589 CACTCGGCTCAGGAAAGAGT 59.394 55.000 0.00 0.00 42.20 3.24
3244 3963 0.605589 ACTCGGCTCAGGAAAGAGTG 59.394 55.000 0.00 0.00 40.25 3.51
3245 3964 0.739112 CTCGGCTCAGGAAAGAGTGC 60.739 60.000 0.00 0.00 37.94 4.40
3246 3965 1.004560 CGGCTCAGGAAAGAGTGCA 60.005 57.895 0.00 0.00 37.94 4.57
3247 3966 0.392193 CGGCTCAGGAAAGAGTGCAT 60.392 55.000 0.00 0.00 37.94 3.96
3248 3967 1.093159 GGCTCAGGAAAGAGTGCATG 58.907 55.000 0.00 0.00 37.94 4.06
3249 3968 0.450983 GCTCAGGAAAGAGTGCATGC 59.549 55.000 11.82 11.82 37.94 4.06
3250 3969 1.817357 CTCAGGAAAGAGTGCATGCA 58.183 50.000 18.46 18.46 0.00 3.96
3251 3970 1.467734 CTCAGGAAAGAGTGCATGCAC 59.532 52.381 37.87 37.87 46.50 4.57
3259 3978 2.562912 GTGCATGCACTTCACCGG 59.437 61.111 37.48 0.00 43.12 5.28
3260 3979 3.364441 TGCATGCACTTCACCGGC 61.364 61.111 18.46 0.00 0.00 6.13
3261 3980 3.364441 GCATGCACTTCACCGGCA 61.364 61.111 14.21 0.00 42.43 5.69
3262 3981 2.562912 CATGCACTTCACCGGCAC 59.437 61.111 0.00 0.00 40.83 5.01
3263 3982 2.112928 ATGCACTTCACCGGCACA 59.887 55.556 0.00 0.00 40.83 4.57
3264 3983 2.260869 ATGCACTTCACCGGCACAC 61.261 57.895 0.00 0.00 40.83 3.82
3265 3984 3.660111 GCACTTCACCGGCACACC 61.660 66.667 0.00 0.00 0.00 4.16
3266 3985 2.978010 CACTTCACCGGCACACCC 60.978 66.667 0.00 0.00 0.00 4.61
3267 3986 3.168528 ACTTCACCGGCACACCCT 61.169 61.111 0.00 0.00 0.00 4.34
3268 3987 2.113139 CTTCACCGGCACACCCTT 59.887 61.111 0.00 0.00 0.00 3.95
3269 3988 2.203280 TTCACCGGCACACCCTTG 60.203 61.111 0.00 0.00 0.00 3.61
3270 3989 4.947147 TCACCGGCACACCCTTGC 62.947 66.667 0.00 0.00 42.18 4.01
3271 3990 4.954970 CACCGGCACACCCTTGCT 62.955 66.667 0.00 0.00 42.56 3.91
3272 3991 4.643387 ACCGGCACACCCTTGCTC 62.643 66.667 0.00 0.00 42.56 4.26
3287 4006 4.479993 CTCCCCGCCTTGGCTGAG 62.480 72.222 10.12 8.76 35.87 3.35
3291 4010 4.033776 CCGCCTTGGCTGAGGGAA 62.034 66.667 10.12 0.00 37.29 3.97
3292 4011 2.437359 CGCCTTGGCTGAGGGAAG 60.437 66.667 10.12 0.00 37.29 3.46
3293 4012 2.753446 GCCTTGGCTGAGGGAAGC 60.753 66.667 4.11 0.00 42.75 3.86
3294 4013 2.437359 CCTTGGCTGAGGGAAGCG 60.437 66.667 0.20 0.00 44.52 4.68
3295 4014 2.665000 CTTGGCTGAGGGAAGCGA 59.335 61.111 0.00 0.00 44.52 4.93
3296 4015 1.003355 CTTGGCTGAGGGAAGCGAA 60.003 57.895 0.00 0.00 44.52 4.70
3297 4016 0.606401 CTTGGCTGAGGGAAGCGAAA 60.606 55.000 0.00 0.00 44.52 3.46
3298 4017 0.606401 TTGGCTGAGGGAAGCGAAAG 60.606 55.000 0.00 0.00 44.52 2.62
3311 4030 4.043200 GAAAGCCACGCCAGCCAC 62.043 66.667 0.00 0.00 0.00 5.01
3780 4499 1.676746 CATCCCTCTAAGGTCGACGA 58.323 55.000 9.92 0.00 31.93 4.20
3781 4500 1.334243 CATCCCTCTAAGGTCGACGAC 59.666 57.143 19.70 19.70 31.93 4.34
3790 4509 4.442018 GTCGACGACCACCCAAAA 57.558 55.556 17.25 0.00 0.00 2.44
3791 4510 2.692817 GTCGACGACCACCCAAAAA 58.307 52.632 17.25 0.00 0.00 1.94
3792 4511 1.232119 GTCGACGACCACCCAAAAAT 58.768 50.000 17.25 0.00 0.00 1.82
3793 4512 1.605232 GTCGACGACCACCCAAAAATT 59.395 47.619 17.25 0.00 0.00 1.82
3794 4513 1.874872 TCGACGACCACCCAAAAATTC 59.125 47.619 0.00 0.00 0.00 2.17
3795 4514 1.068816 CGACGACCACCCAAAAATTCC 60.069 52.381 0.00 0.00 0.00 3.01
3796 4515 1.271379 GACGACCACCCAAAAATTCCC 59.729 52.381 0.00 0.00 0.00 3.97
3797 4516 0.242555 CGACCACCCAAAAATTCCCG 59.757 55.000 0.00 0.00 0.00 5.14
3798 4517 0.606096 GACCACCCAAAAATTCCCGG 59.394 55.000 0.00 0.00 0.00 5.73
3799 4518 1.295101 CCACCCAAAAATTCCCGGC 59.705 57.895 0.00 0.00 0.00 6.13
3800 4519 1.080161 CACCCAAAAATTCCCGGCG 60.080 57.895 0.00 0.00 0.00 6.46
3801 4520 1.228613 ACCCAAAAATTCCCGGCGA 60.229 52.632 9.30 0.00 0.00 5.54
3802 4521 0.828343 ACCCAAAAATTCCCGGCGAA 60.828 50.000 9.30 1.12 34.14 4.70
3803 4522 0.389296 CCCAAAAATTCCCGGCGAAC 60.389 55.000 9.30 0.00 31.79 3.95
3804 4523 0.389296 CCAAAAATTCCCGGCGAACC 60.389 55.000 9.30 0.00 31.79 3.62
3805 4524 0.601057 CAAAAATTCCCGGCGAACCT 59.399 50.000 9.30 0.00 31.79 3.50
3806 4525 0.601057 AAAAATTCCCGGCGAACCTG 59.399 50.000 9.30 0.00 31.79 4.00
3807 4526 1.873270 AAAATTCCCGGCGAACCTGC 61.873 55.000 9.30 0.00 31.79 4.85
3808 4527 3.561120 AATTCCCGGCGAACCTGCA 62.561 57.895 9.30 0.00 36.28 4.41
3809 4528 2.837031 AATTCCCGGCGAACCTGCAT 62.837 55.000 9.30 0.00 36.28 3.96
3810 4529 3.969250 TTCCCGGCGAACCTGCATC 62.969 63.158 9.30 0.00 36.28 3.91
3812 4531 4.776322 CCGGCGAACCTGCATCCA 62.776 66.667 9.30 0.00 36.28 3.41
3813 4532 3.499737 CGGCGAACCTGCATCCAC 61.500 66.667 0.00 0.00 36.28 4.02
3814 4533 3.134127 GGCGAACCTGCATCCACC 61.134 66.667 0.00 0.00 36.28 4.61
3815 4534 2.359850 GCGAACCTGCATCCACCA 60.360 61.111 0.00 0.00 34.15 4.17
3816 4535 2.690778 GCGAACCTGCATCCACCAC 61.691 63.158 0.00 0.00 34.15 4.16
3817 4536 2.040544 CGAACCTGCATCCACCACC 61.041 63.158 0.00 0.00 0.00 4.61
3818 4537 1.678970 GAACCTGCATCCACCACCC 60.679 63.158 0.00 0.00 0.00 4.61
3819 4538 2.142292 GAACCTGCATCCACCACCCT 62.142 60.000 0.00 0.00 0.00 4.34
3820 4539 0.844661 AACCTGCATCCACCACCCTA 60.845 55.000 0.00 0.00 0.00 3.53
3821 4540 0.844661 ACCTGCATCCACCACCCTAA 60.845 55.000 0.00 0.00 0.00 2.69
3822 4541 0.331278 CCTGCATCCACCACCCTAAA 59.669 55.000 0.00 0.00 0.00 1.85
3823 4542 1.272425 CCTGCATCCACCACCCTAAAA 60.272 52.381 0.00 0.00 0.00 1.52
3824 4543 1.818674 CTGCATCCACCACCCTAAAAC 59.181 52.381 0.00 0.00 0.00 2.43
3825 4544 1.145945 TGCATCCACCACCCTAAAACA 59.854 47.619 0.00 0.00 0.00 2.83
3826 4545 1.818674 GCATCCACCACCCTAAAACAG 59.181 52.381 0.00 0.00 0.00 3.16
3827 4546 2.554344 GCATCCACCACCCTAAAACAGA 60.554 50.000 0.00 0.00 0.00 3.41
3828 4547 3.877735 GCATCCACCACCCTAAAACAGAT 60.878 47.826 0.00 0.00 0.00 2.90
3829 4548 4.627741 GCATCCACCACCCTAAAACAGATA 60.628 45.833 0.00 0.00 0.00 1.98
3830 4549 4.837093 TCCACCACCCTAAAACAGATAG 57.163 45.455 0.00 0.00 0.00 2.08
3831 4550 4.172807 TCCACCACCCTAAAACAGATAGT 58.827 43.478 0.00 0.00 0.00 2.12
3832 4551 4.019681 TCCACCACCCTAAAACAGATAGTG 60.020 45.833 0.00 0.00 0.00 2.74
3833 4552 4.261801 CACCACCCTAAAACAGATAGTGG 58.738 47.826 4.79 4.79 41.68 4.00
3834 4553 3.265995 ACCACCCTAAAACAGATAGTGGG 59.734 47.826 10.71 0.00 40.92 4.61
3835 4554 3.371595 CCACCCTAAAACAGATAGTGGGG 60.372 52.174 0.00 0.00 36.68 4.96
3836 4555 3.265995 CACCCTAAAACAGATAGTGGGGT 59.734 47.826 0.00 0.00 45.60 4.95
3837 4556 3.920841 ACCCTAAAACAGATAGTGGGGTT 59.079 43.478 0.00 0.00 42.56 4.11
3838 4557 4.263771 ACCCTAAAACAGATAGTGGGGTTG 60.264 45.833 0.00 0.00 42.56 3.77
3839 4558 3.694566 CCTAAAACAGATAGTGGGGTTGC 59.305 47.826 0.00 0.00 0.00 4.17
3840 4559 3.525800 AAAACAGATAGTGGGGTTGCT 57.474 42.857 0.00 0.00 0.00 3.91
3841 4560 3.525800 AAACAGATAGTGGGGTTGCTT 57.474 42.857 0.00 0.00 0.00 3.91
3842 4561 2.789409 ACAGATAGTGGGGTTGCTTC 57.211 50.000 0.00 0.00 0.00 3.86
3843 4562 2.269940 ACAGATAGTGGGGTTGCTTCT 58.730 47.619 0.00 0.00 0.00 2.85
3844 4563 2.237392 ACAGATAGTGGGGTTGCTTCTC 59.763 50.000 0.00 0.00 0.00 2.87
3845 4564 1.840635 AGATAGTGGGGTTGCTTCTCC 59.159 52.381 0.00 0.00 0.00 3.71
3846 4565 0.541863 ATAGTGGGGTTGCTTCTCCG 59.458 55.000 0.00 0.00 0.00 4.63
3847 4566 1.550130 TAGTGGGGTTGCTTCTCCGG 61.550 60.000 0.00 0.00 0.00 5.14
3848 4567 4.344865 TGGGGTTGCTTCTCCGGC 62.345 66.667 0.00 0.00 0.00 6.13
3850 4569 4.388499 GGGTTGCTTCTCCGGCGA 62.388 66.667 9.30 0.00 0.00 5.54
3851 4570 2.358247 GGTTGCTTCTCCGGCGAA 60.358 61.111 9.30 6.71 0.00 4.70
3852 4571 2.677979 GGTTGCTTCTCCGGCGAAC 61.678 63.158 9.30 2.13 0.00 3.95
3853 4572 1.668151 GTTGCTTCTCCGGCGAACT 60.668 57.895 9.30 0.00 0.00 3.01
3854 4573 1.070786 TTGCTTCTCCGGCGAACTT 59.929 52.632 9.30 0.00 0.00 2.66
3855 4574 1.227999 TTGCTTCTCCGGCGAACTTG 61.228 55.000 9.30 0.00 0.00 3.16
3856 4575 3.028366 GCTTCTCCGGCGAACTTGC 62.028 63.158 9.30 1.77 0.00 4.01
3857 4576 1.667830 CTTCTCCGGCGAACTTGCA 60.668 57.895 9.30 0.00 36.28 4.08
3858 4577 1.901650 CTTCTCCGGCGAACTTGCAC 61.902 60.000 9.30 0.00 36.28 4.57
3859 4578 3.423154 CTCCGGCGAACTTGCACC 61.423 66.667 9.30 0.00 36.28 5.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 1.019278 CCTTATGCGCGTGGTTGTCT 61.019 55.000 13.61 0.00 0.00 3.41
12 13 2.100216 GCCTTATGCGCGTGGTTG 59.900 61.111 13.61 0.00 0.00 3.77
23 24 0.328258 AAGCAAGGTGGACGCCTTAT 59.672 50.000 16.10 6.33 46.33 1.73
29 30 1.156736 CTAACCAAGCAAGGTGGACG 58.843 55.000 0.42 0.00 42.25 4.79
34 35 3.010584 ACCATCATCTAACCAAGCAAGGT 59.989 43.478 0.00 0.00 45.91 3.50
51 52 0.744771 GGTCTTCGGCTTCCACCATC 60.745 60.000 0.00 0.00 0.00 3.51
55 56 1.079057 GGAGGTCTTCGGCTTCCAC 60.079 63.158 0.00 0.00 0.00 4.02
57 58 0.179070 GATGGAGGTCTTCGGCTTCC 60.179 60.000 0.00 0.00 0.00 3.46
74 75 2.032030 CACAAAGTTTCGACAAGCGGAT 60.032 45.455 0.00 0.00 41.33 4.18
77 78 2.730183 TCACAAAGTTTCGACAAGCG 57.270 45.000 0.00 0.00 42.69 4.68
87 88 2.554032 CGGCTTCAAGGATCACAAAGTT 59.446 45.455 0.00 0.00 0.00 2.66
149 150 8.470805 ACAACAATACACACAGGAACAAAATAA 58.529 29.630 0.00 0.00 0.00 1.40
151 152 6.756074 CACAACAATACACACAGGAACAAAAT 59.244 34.615 0.00 0.00 0.00 1.82
233 234 8.415553 TGTTCATTTCATTGAAGAAACAGACAT 58.584 29.630 14.29 0.00 40.03 3.06
237 238 6.142798 CGGTGTTCATTTCATTGAAGAAACAG 59.857 38.462 16.82 9.36 40.03 3.16
239 240 5.977129 ACGGTGTTCATTTCATTGAAGAAAC 59.023 36.000 0.00 6.47 40.03 2.78
240 241 6.142818 ACGGTGTTCATTTCATTGAAGAAA 57.857 33.333 0.00 0.00 41.31 2.52
244 248 4.047822 GCAACGGTGTTCATTTCATTGAA 58.952 39.130 0.66 0.00 33.32 2.69
289 293 8.294577 GGAAATTACCAGTTTACCACAAACTAG 58.705 37.037 2.30 0.00 38.32 2.57
315 319 1.470098 CTCCAATGAAGCAAACCGGAG 59.530 52.381 9.46 0.00 33.19 4.63
316 320 1.533625 CTCCAATGAAGCAAACCGGA 58.466 50.000 9.46 0.00 0.00 5.14
326 330 3.430862 GCCGTGCGCTCCAATGAA 61.431 61.111 9.73 0.00 0.00 2.57
354 358 4.768448 TCAACATGATGCCATTGTTTCTCT 59.232 37.500 0.00 0.00 0.00 3.10
361 365 2.159156 CCTGGTCAACATGATGCCATTG 60.159 50.000 15.71 9.23 0.00 2.82
362 366 2.104967 CCTGGTCAACATGATGCCATT 58.895 47.619 15.71 0.00 0.00 3.16
397 401 4.340019 TAACGCGTTGCCGACCGA 62.340 61.111 33.40 8.85 35.63 4.69
399 403 4.143363 GCTAACGCGTTGCCGACC 62.143 66.667 33.40 11.43 35.63 4.79
403 407 0.996727 CTTTGTGCTAACGCGTTGCC 60.997 55.000 33.40 22.84 39.65 4.52
407 411 0.580104 GTGTCTTTGTGCTAACGCGT 59.420 50.000 5.58 5.58 39.65 6.01
409 413 0.237498 GGGTGTCTTTGTGCTAACGC 59.763 55.000 0.00 0.00 0.00 4.84
434 438 1.134640 TGAAAAGGCCATCATGCATGC 60.135 47.619 22.25 11.82 0.00 4.06
444 448 0.823356 GTGGAGCACTGAAAAGGCCA 60.823 55.000 5.01 0.00 0.00 5.36
445 449 1.856265 CGTGGAGCACTGAAAAGGCC 61.856 60.000 0.00 0.00 31.34 5.19
446 450 0.884704 TCGTGGAGCACTGAAAAGGC 60.885 55.000 0.00 0.00 31.34 4.35
448 452 2.146342 ACATCGTGGAGCACTGAAAAG 58.854 47.619 0.00 0.00 31.34 2.27
451 455 4.099419 ACATATACATCGTGGAGCACTGAA 59.901 41.667 0.00 0.00 31.34 3.02
452 456 3.636764 ACATATACATCGTGGAGCACTGA 59.363 43.478 0.00 0.00 31.34 3.41
453 457 3.737774 CACATATACATCGTGGAGCACTG 59.262 47.826 0.00 0.00 31.34 3.66
501 506 0.318955 GTTGCTTTGGCGCATCACTT 60.319 50.000 10.83 0.00 40.04 3.16
502 507 1.174712 AGTTGCTTTGGCGCATCACT 61.175 50.000 10.83 0.00 40.04 3.41
503 508 0.521291 TAGTTGCTTTGGCGCATCAC 59.479 50.000 10.83 0.00 40.04 3.06
525 530 9.813446 GATCATCATAAAATGCTTTCTTCCTTT 57.187 29.630 0.00 0.00 0.00 3.11
527 532 8.763984 AGATCATCATAAAATGCTTTCTTCCT 57.236 30.769 0.00 0.00 0.00 3.36
529 534 8.554528 TCGAGATCATCATAAAATGCTTTCTTC 58.445 33.333 0.00 0.00 0.00 2.87
530 535 8.442632 TCGAGATCATCATAAAATGCTTTCTT 57.557 30.769 0.00 0.00 0.00 2.52
582 594 7.273381 GCATTGGTTGACAGTCATTTTACATAC 59.727 37.037 3.45 0.00 0.00 2.39
586 598 5.772521 AGCATTGGTTGACAGTCATTTTAC 58.227 37.500 3.45 0.00 0.00 2.01
597 609 1.135689 CACGGCTTAGCATTGGTTGAC 60.136 52.381 6.53 0.00 0.00 3.18
598 610 1.164411 CACGGCTTAGCATTGGTTGA 58.836 50.000 6.53 0.00 0.00 3.18
599 611 0.456653 GCACGGCTTAGCATTGGTTG 60.457 55.000 6.53 0.00 0.00 3.77
605 617 2.514592 ATGCGCACGGCTTAGCAT 60.515 55.556 14.90 0.00 44.43 3.79
606 618 3.195002 GATGCGCACGGCTTAGCA 61.195 61.111 14.90 0.00 44.05 3.49
607 619 4.285149 CGATGCGCACGGCTTAGC 62.285 66.667 14.90 0.00 44.05 3.09
608 620 1.490693 AATCGATGCGCACGGCTTAG 61.491 55.000 24.69 7.06 44.05 2.18
614 1164 2.954346 TCGGAATCGATGCGCACG 60.954 61.111 14.90 19.03 43.34 5.34
644 1194 3.869623 CAGAGCCCTGTTAGCATGT 57.130 52.632 0.00 0.00 35.70 3.21
654 1204 2.801631 GCGGCAGATACAGAGCCCT 61.802 63.158 0.00 0.00 45.56 5.19
690 1244 2.492012 CCATCTAGGCGTACGTCTAGT 58.508 52.381 40.52 29.84 46.97 2.57
814 1370 4.748679 CGGCGAGCAAGCAAGCAC 62.749 66.667 0.00 0.00 39.27 4.40
826 1382 0.813610 CAAATCTATGGGTGCGGCGA 60.814 55.000 12.98 0.00 0.00 5.54
827 1383 1.095228 ACAAATCTATGGGTGCGGCG 61.095 55.000 0.51 0.51 0.00 6.46
828 1384 0.663153 GACAAATCTATGGGTGCGGC 59.337 55.000 0.00 0.00 0.00 6.53
829 1385 0.937304 CGACAAATCTATGGGTGCGG 59.063 55.000 0.00 0.00 0.00 5.69
850 1406 0.317160 GACCGGAGTGACACATGTGA 59.683 55.000 31.94 8.09 0.00 3.58
858 1414 0.741915 GATCAGGAGACCGGAGTGAC 59.258 60.000 9.46 0.00 30.24 3.67
862 1418 2.069465 CTGCGATCAGGAGACCGGAG 62.069 65.000 9.46 0.00 41.23 4.63
913 1469 2.422479 CAGCAACAGATCATTGGTCCTG 59.578 50.000 10.49 6.50 35.66 3.86
952 1508 2.177778 GCAGCGGCAGAAGAAAGC 59.822 61.111 3.18 0.00 40.72 3.51
964 1523 3.549827 CCAATCTACTAGAGTGAGCAGCG 60.550 52.174 13.90 0.00 42.41 5.18
1091 1697 1.531264 CGAGCGCGTATGTAACAGAGT 60.531 52.381 8.43 0.00 0.00 3.24
1099 1705 0.248336 TCGAAATCGAGCGCGTATGT 60.248 50.000 10.30 0.00 44.22 2.29
1123 1742 3.243336 CGCTACAGAAACTGAGGTACAC 58.757 50.000 5.76 0.00 35.18 2.90
1128 1747 2.735762 GCTACCGCTACAGAAACTGAGG 60.736 54.545 5.76 5.96 35.18 3.86
1129 1748 2.164624 AGCTACCGCTACAGAAACTGAG 59.835 50.000 5.76 0.96 46.79 3.35
1130 1749 2.094700 CAGCTACCGCTACAGAAACTGA 60.095 50.000 5.76 0.00 46.99 3.41
1132 1751 1.893801 ACAGCTACCGCTACAGAAACT 59.106 47.619 0.00 0.00 46.99 2.66
1133 1752 1.993370 CACAGCTACCGCTACAGAAAC 59.007 52.381 0.00 0.00 46.99 2.78
1134 1753 1.067142 CCACAGCTACCGCTACAGAAA 60.067 52.381 0.00 0.00 46.99 2.52
1135 1754 0.530744 CCACAGCTACCGCTACAGAA 59.469 55.000 0.00 0.00 46.99 3.02
1136 1755 0.323087 TCCACAGCTACCGCTACAGA 60.323 55.000 0.00 0.00 46.99 3.41
1137 1756 0.101399 CTCCACAGCTACCGCTACAG 59.899 60.000 0.00 0.00 46.99 2.74
1138 1757 0.611062 ACTCCACAGCTACCGCTACA 60.611 55.000 0.00 0.00 46.99 2.74
1139 1758 0.531200 AACTCCACAGCTACCGCTAC 59.469 55.000 0.00 0.00 46.99 3.58
1140 1759 1.203994 GAAACTCCACAGCTACCGCTA 59.796 52.381 0.00 0.00 46.99 4.26
1142 1761 1.019805 GGAAACTCCACAGCTACCGC 61.020 60.000 0.00 0.00 36.28 5.68
1143 1762 0.391263 GGGAAACTCCACAGCTACCG 60.391 60.000 0.00 0.00 38.64 4.02
1144 1763 0.984995 AGGGAAACTCCACAGCTACC 59.015 55.000 0.00 0.00 38.64 3.18
1145 1764 3.975168 TTAGGGAAACTCCACAGCTAC 57.025 47.619 0.00 0.00 38.64 3.58
1243 1880 4.645762 TGCTGTAACAAAACATTGCAGA 57.354 36.364 6.96 0.00 40.91 4.26
1311 1949 1.522668 CATGCCCTTGTTCGAACTGA 58.477 50.000 27.32 15.60 0.00 3.41
1331 1969 4.717313 TGAGCCCAGCAGCAGCAG 62.717 66.667 3.17 0.00 45.49 4.24
1363 2001 4.074970 AGTTCACCATTTGATCTGTCACC 58.925 43.478 0.00 0.00 33.66 4.02
1370 2008 4.843728 TGGACCTAGTTCACCATTTGATC 58.156 43.478 0.00 0.00 32.84 2.92
1409 2051 2.152016 GCACTGGAGTTTTACTGGTCC 58.848 52.381 0.00 0.00 0.00 4.46
1440 2086 9.704098 GAAGAAATCACAAATACTCCGTATTTC 57.296 33.333 8.56 0.00 43.92 2.17
1444 2090 7.608153 TCAGAAGAAATCACAAATACTCCGTA 58.392 34.615 0.00 0.00 0.00 4.02
1445 2091 6.464222 TCAGAAGAAATCACAAATACTCCGT 58.536 36.000 0.00 0.00 0.00 4.69
1446 2092 6.968131 TCAGAAGAAATCACAAATACTCCG 57.032 37.500 0.00 0.00 0.00 4.63
1447 2093 9.171877 AGAATCAGAAGAAATCACAAATACTCC 57.828 33.333 0.00 0.00 0.00 3.85
1450 2096 9.565213 CCAAGAATCAGAAGAAATCACAAATAC 57.435 33.333 0.00 0.00 0.00 1.89
1451 2097 9.300681 ACCAAGAATCAGAAGAAATCACAAATA 57.699 29.630 0.00 0.00 0.00 1.40
1452 2098 8.186709 ACCAAGAATCAGAAGAAATCACAAAT 57.813 30.769 0.00 0.00 0.00 2.32
1453 2099 7.587037 ACCAAGAATCAGAAGAAATCACAAA 57.413 32.000 0.00 0.00 0.00 2.83
1454 2100 7.285172 TCAACCAAGAATCAGAAGAAATCACAA 59.715 33.333 0.00 0.00 0.00 3.33
1455 2101 6.772233 TCAACCAAGAATCAGAAGAAATCACA 59.228 34.615 0.00 0.00 0.00 3.58
1456 2102 7.040823 AGTCAACCAAGAATCAGAAGAAATCAC 60.041 37.037 0.00 0.00 0.00 3.06
1457 2103 7.000472 AGTCAACCAAGAATCAGAAGAAATCA 59.000 34.615 0.00 0.00 0.00 2.57
1468 2114 3.430218 CGTCTGTGAGTCAACCAAGAATC 59.570 47.826 0.00 0.00 33.50 2.52
1475 2121 0.667792 GGAGCGTCTGTGAGTCAACC 60.668 60.000 0.00 0.00 0.00 3.77
1552 2204 4.504461 CCAAATGATCGCACTACAGTAGTC 59.496 45.833 10.54 5.37 36.76 2.59
1553 2205 4.081642 ACCAAATGATCGCACTACAGTAGT 60.082 41.667 7.48 7.48 40.28 2.73
1554 2206 4.433615 ACCAAATGATCGCACTACAGTAG 58.566 43.478 6.00 6.00 0.00 2.57
1555 2207 4.465632 ACCAAATGATCGCACTACAGTA 57.534 40.909 0.00 0.00 0.00 2.74
1556 2208 3.334583 ACCAAATGATCGCACTACAGT 57.665 42.857 0.00 0.00 0.00 3.55
1557 2209 5.121611 TGTTTACCAAATGATCGCACTACAG 59.878 40.000 0.00 0.00 0.00 2.74
1563 2215 5.976534 GCATATTGTTTACCAAATGATCGCA 59.023 36.000 0.00 0.00 36.44 5.10
1564 2216 5.402270 GGCATATTGTTTACCAAATGATCGC 59.598 40.000 0.00 0.00 36.44 4.58
1577 2229 4.949856 CCTTGTACTCCTGGCATATTGTTT 59.050 41.667 0.00 0.00 0.00 2.83
1578 2230 4.227300 TCCTTGTACTCCTGGCATATTGTT 59.773 41.667 0.00 0.00 0.00 2.83
1579 2231 3.780294 TCCTTGTACTCCTGGCATATTGT 59.220 43.478 0.00 0.00 0.00 2.71
1580 2232 4.422073 TCCTTGTACTCCTGGCATATTG 57.578 45.455 0.00 0.00 0.00 1.90
1581 2233 5.653255 AATCCTTGTACTCCTGGCATATT 57.347 39.130 0.00 0.00 0.00 1.28
1582 2234 5.280215 GCTAATCCTTGTACTCCTGGCATAT 60.280 44.000 0.00 0.00 0.00 1.78
1584 2236 3.181450 GCTAATCCTTGTACTCCTGGCAT 60.181 47.826 0.00 0.00 0.00 4.40
1585 2237 2.170607 GCTAATCCTTGTACTCCTGGCA 59.829 50.000 0.00 0.00 0.00 4.92
1587 2239 4.446371 CAAGCTAATCCTTGTACTCCTGG 58.554 47.826 0.00 0.00 37.89 4.45
1591 2251 4.876679 GGTTCCAAGCTAATCCTTGTACTC 59.123 45.833 0.00 0.00 40.40 2.59
1604 2264 3.244770 TGAACGGATTAAGGTTCCAAGCT 60.245 43.478 11.87 0.00 41.36 3.74
1605 2265 3.078837 TGAACGGATTAAGGTTCCAAGC 58.921 45.455 11.87 0.00 41.36 4.01
1732 2392 4.338379 TGGAGAGATGAAGATGAGCATG 57.662 45.455 0.00 0.00 0.00 4.06
1786 2452 9.553064 AAGCAAAACAAATTACCAATATGTTGA 57.447 25.926 3.41 0.00 37.53 3.18
1868 2540 4.096984 AGTGGTTTATTACTACCGTCTCCG 59.903 45.833 0.00 0.00 38.90 4.63
1874 2546 7.092716 ACAGTAACAGTGGTTTATTACTACCG 58.907 38.462 0.00 0.00 38.90 4.02
1876 2548 8.090214 TGGACAGTAACAGTGGTTTATTACTAC 58.910 37.037 0.00 0.00 36.06 2.73
1877 2549 8.192743 TGGACAGTAACAGTGGTTTATTACTA 57.807 34.615 0.00 0.00 36.06 1.82
1878 2550 7.069877 TGGACAGTAACAGTGGTTTATTACT 57.930 36.000 0.00 0.00 38.17 2.24
1959 2638 2.095364 TCCACGTAGAACGAAGAAGCTC 60.095 50.000 6.44 0.00 46.05 4.09
2016 2695 4.504916 CGGCCCTGAGCTCGTCTG 62.505 72.222 9.64 0.00 43.05 3.51
2218 2912 0.243907 TCGGAACCTTGAGAAGCTCG 59.756 55.000 0.00 0.00 32.35 5.03
2243 2937 3.307829 TCGACAAGCTTCGACGATC 57.692 52.632 6.41 0.00 43.01 3.69
2249 2943 2.343843 CAGAATCTGTCGACAAGCTTCG 59.656 50.000 20.49 6.80 40.53 3.79
2314 3010 3.927481 AAGAGGCAAGGGGAAGCGC 62.927 63.158 0.00 0.00 0.00 5.92
2424 3127 3.435186 GCTTGCAGGGAGGAACGC 61.435 66.667 0.00 0.00 0.00 4.84
2522 3225 1.106351 ATCATCGTCGGAGCAGCTCT 61.106 55.000 21.99 0.00 0.00 4.09
2561 3264 3.737172 CAAGCTTTCCCACCGCCG 61.737 66.667 0.00 0.00 0.00 6.46
2666 3377 2.691011 CCGGGAAACAGTTCAGGAAAAA 59.309 45.455 0.00 0.00 35.99 1.94
2667 3378 2.303175 CCGGGAAACAGTTCAGGAAAA 58.697 47.619 0.00 0.00 35.99 2.29
2702 3421 0.103755 GTCGCAGATCATCAGCCTGA 59.896 55.000 0.00 0.00 40.67 3.86
2758 3477 4.700365 CTCGTGCGCACTGACGGA 62.700 66.667 35.27 23.75 36.23 4.69
2791 3510 0.030908 CATCCGGGAGAAGTAGTCGC 59.969 60.000 0.00 0.00 0.00 5.19
2846 3565 2.405172 GAAACTCAGTTCACTCCGGTC 58.595 52.381 0.00 0.00 0.00 4.79
2975 3694 7.811482 TGTACCCATTTTTAAGTAGTAGGGA 57.189 36.000 0.00 0.00 38.43 4.20
2976 3695 7.064966 CGTTGTACCCATTTTTAAGTAGTAGGG 59.935 40.741 0.00 0.00 40.88 3.53
2977 3696 7.603784 ACGTTGTACCCATTTTTAAGTAGTAGG 59.396 37.037 0.00 0.00 0.00 3.18
2978 3697 8.538409 ACGTTGTACCCATTTTTAAGTAGTAG 57.462 34.615 0.00 0.00 0.00 2.57
2979 3698 7.602265 GGACGTTGTACCCATTTTTAAGTAGTA 59.398 37.037 0.00 0.00 0.00 1.82
2980 3699 6.427853 GGACGTTGTACCCATTTTTAAGTAGT 59.572 38.462 0.00 0.00 0.00 2.73
2981 3700 6.652062 AGGACGTTGTACCCATTTTTAAGTAG 59.348 38.462 0.00 0.00 0.00 2.57
2982 3701 6.427547 CAGGACGTTGTACCCATTTTTAAGTA 59.572 38.462 0.00 0.00 0.00 2.24
2983 3702 5.239963 CAGGACGTTGTACCCATTTTTAAGT 59.760 40.000 0.00 0.00 0.00 2.24
2984 3703 5.695818 CAGGACGTTGTACCCATTTTTAAG 58.304 41.667 0.00 0.00 0.00 1.85
2985 3704 4.023021 GCAGGACGTTGTACCCATTTTTAA 60.023 41.667 0.00 0.00 0.00 1.52
2986 3705 3.502979 GCAGGACGTTGTACCCATTTTTA 59.497 43.478 0.00 0.00 0.00 1.52
2987 3706 2.295070 GCAGGACGTTGTACCCATTTTT 59.705 45.455 0.00 0.00 0.00 1.94
2988 3707 1.883926 GCAGGACGTTGTACCCATTTT 59.116 47.619 0.00 0.00 0.00 1.82
2989 3708 1.530323 GCAGGACGTTGTACCCATTT 58.470 50.000 0.00 0.00 0.00 2.32
2990 3709 0.322187 GGCAGGACGTTGTACCCATT 60.322 55.000 0.00 0.00 0.00 3.16
2991 3710 1.298667 GGCAGGACGTTGTACCCAT 59.701 57.895 0.00 0.00 0.00 4.00
2992 3711 2.745037 GGCAGGACGTTGTACCCA 59.255 61.111 0.00 0.00 0.00 4.51
2993 3712 1.876497 TACGGCAGGACGTTGTACCC 61.876 60.000 5.13 0.00 46.25 3.69
2994 3713 0.038343 TTACGGCAGGACGTTGTACC 60.038 55.000 5.13 0.00 46.25 3.34
2995 3714 2.000429 ATTACGGCAGGACGTTGTAC 58.000 50.000 5.13 0.00 46.25 2.90
2996 3715 4.114073 CAATATTACGGCAGGACGTTGTA 58.886 43.478 5.13 0.00 46.25 2.41
2997 3716 2.933906 CAATATTACGGCAGGACGTTGT 59.066 45.455 5.13 0.00 46.25 3.32
2998 3717 2.933906 ACAATATTACGGCAGGACGTTG 59.066 45.455 5.13 0.00 46.25 4.10
2999 3718 3.192466 GACAATATTACGGCAGGACGTT 58.808 45.455 5.13 0.00 46.25 3.99
3001 3720 2.132762 GGACAATATTACGGCAGGACG 58.867 52.381 0.00 0.00 40.31 4.79
3002 3721 2.132762 CGGACAATATTACGGCAGGAC 58.867 52.381 0.00 0.00 0.00 3.85
3003 3722 1.758280 ACGGACAATATTACGGCAGGA 59.242 47.619 10.01 0.00 0.00 3.86
3004 3723 2.132762 GACGGACAATATTACGGCAGG 58.867 52.381 7.19 0.00 33.82 4.85
3005 3724 2.132762 GGACGGACAATATTACGGCAG 58.867 52.381 12.43 0.00 35.72 4.85
3006 3725 1.758280 AGGACGGACAATATTACGGCA 59.242 47.619 12.43 0.00 35.72 5.69
3007 3726 2.401351 GAGGACGGACAATATTACGGC 58.599 52.381 10.01 7.29 0.00 5.68
3008 3727 2.288640 GGGAGGACGGACAATATTACGG 60.289 54.545 10.01 5.15 0.00 4.02
3009 3728 2.288640 GGGGAGGACGGACAATATTACG 60.289 54.545 5.23 5.23 0.00 3.18
3010 3729 2.038164 GGGGGAGGACGGACAATATTAC 59.962 54.545 0.00 0.00 0.00 1.89
3011 3730 2.332117 GGGGGAGGACGGACAATATTA 58.668 52.381 0.00 0.00 0.00 0.98
3012 3731 1.137697 GGGGGAGGACGGACAATATT 58.862 55.000 0.00 0.00 0.00 1.28
3013 3732 0.030501 TGGGGGAGGACGGACAATAT 60.031 55.000 0.00 0.00 0.00 1.28
3014 3733 0.979187 GTGGGGGAGGACGGACAATA 60.979 60.000 0.00 0.00 0.00 1.90
3015 3734 2.124085 TGGGGGAGGACGGACAAT 59.876 61.111 0.00 0.00 0.00 2.71
3016 3735 2.926242 GTGGGGGAGGACGGACAA 60.926 66.667 0.00 0.00 0.00 3.18
3025 3744 2.076597 AAAAACCGAGGGTGGGGGAG 62.077 60.000 0.00 0.00 35.34 4.30
3026 3745 2.071636 GAAAAACCGAGGGTGGGGGA 62.072 60.000 0.00 0.00 35.34 4.81
3027 3746 1.605451 GAAAAACCGAGGGTGGGGG 60.605 63.158 0.00 0.00 35.34 5.40
3028 3747 1.969589 CGAAAAACCGAGGGTGGGG 60.970 63.158 0.00 0.00 35.34 4.96
3029 3748 0.322187 ATCGAAAAACCGAGGGTGGG 60.322 55.000 0.00 0.00 42.21 4.61
3030 3749 1.084289 GATCGAAAAACCGAGGGTGG 58.916 55.000 0.00 0.00 42.21 4.61
3031 3750 1.084289 GGATCGAAAAACCGAGGGTG 58.916 55.000 0.00 0.00 42.21 4.61
3032 3751 0.688487 TGGATCGAAAAACCGAGGGT 59.312 50.000 0.00 0.00 42.21 4.34
3033 3752 1.467342 GTTGGATCGAAAAACCGAGGG 59.533 52.381 0.00 0.00 42.21 4.30
3034 3753 1.127951 CGTTGGATCGAAAAACCGAGG 59.872 52.381 0.00 0.00 42.21 4.63
3035 3754 1.796459 ACGTTGGATCGAAAAACCGAG 59.204 47.619 5.44 0.00 42.21 4.63
3036 3755 1.794116 GACGTTGGATCGAAAAACCGA 59.206 47.619 5.44 0.00 43.16 4.69
3037 3756 1.136169 GGACGTTGGATCGAAAAACCG 60.136 52.381 0.00 0.00 34.70 4.44
3038 3757 2.148768 AGGACGTTGGATCGAAAAACC 58.851 47.619 0.00 0.00 34.70 3.27
3039 3758 3.064931 AGAGGACGTTGGATCGAAAAAC 58.935 45.455 0.00 0.00 34.70 2.43
3040 3759 3.323243 GAGAGGACGTTGGATCGAAAAA 58.677 45.455 0.00 0.00 34.70 1.94
3041 3760 2.670229 CGAGAGGACGTTGGATCGAAAA 60.670 50.000 8.02 0.00 32.13 2.29
3042 3761 1.135489 CGAGAGGACGTTGGATCGAAA 60.135 52.381 8.02 0.00 32.13 3.46
3043 3762 0.450583 CGAGAGGACGTTGGATCGAA 59.549 55.000 8.02 0.00 32.13 3.71
3044 3763 0.675837 ACGAGAGGACGTTGGATCGA 60.676 55.000 17.26 0.00 44.14 3.59
3045 3764 1.801332 ACGAGAGGACGTTGGATCG 59.199 57.895 11.12 11.12 44.14 3.69
3053 3772 2.047679 AAAGTCGAAACGAGAGGACG 57.952 50.000 0.00 0.00 36.23 4.79
3054 3773 3.121544 ACAAAAGTCGAAACGAGAGGAC 58.878 45.455 0.00 0.00 36.23 3.85
3055 3774 3.447918 ACAAAAGTCGAAACGAGAGGA 57.552 42.857 0.00 0.00 36.23 3.71
3056 3775 3.303132 CCAACAAAAGTCGAAACGAGAGG 60.303 47.826 0.00 0.00 36.23 3.69
3057 3776 3.308866 ACCAACAAAAGTCGAAACGAGAG 59.691 43.478 0.00 0.00 36.23 3.20
3058 3777 3.062909 CACCAACAAAAGTCGAAACGAGA 59.937 43.478 0.00 0.00 36.23 4.04
3059 3778 3.350912 CACCAACAAAAGTCGAAACGAG 58.649 45.455 0.00 0.00 36.23 4.18
3060 3779 2.096174 CCACCAACAAAAGTCGAAACGA 59.904 45.455 0.00 0.00 0.00 3.85
3061 3780 2.096174 TCCACCAACAAAAGTCGAAACG 59.904 45.455 0.00 0.00 0.00 3.60
3062 3781 3.431856 GTCCACCAACAAAAGTCGAAAC 58.568 45.455 0.00 0.00 0.00 2.78
3063 3782 2.424246 GGTCCACCAACAAAAGTCGAAA 59.576 45.455 0.00 0.00 35.64 3.46
3064 3783 2.018515 GGTCCACCAACAAAAGTCGAA 58.981 47.619 0.00 0.00 35.64 3.71
3065 3784 1.670791 GGTCCACCAACAAAAGTCGA 58.329 50.000 0.00 0.00 35.64 4.20
3066 3785 0.666374 GGGTCCACCAACAAAAGTCG 59.334 55.000 0.00 0.00 39.85 4.18
3067 3786 2.067365 AGGGTCCACCAACAAAAGTC 57.933 50.000 0.00 0.00 43.89 3.01
3068 3787 2.543037 AAGGGTCCACCAACAAAAGT 57.457 45.000 0.00 0.00 43.89 2.66
3069 3788 3.904800 AAAAGGGTCCACCAACAAAAG 57.095 42.857 0.00 0.00 43.89 2.27
3070 3789 5.959583 AATAAAAGGGTCCACCAACAAAA 57.040 34.783 0.00 0.00 43.89 2.44
3071 3790 5.304871 GGTAATAAAAGGGTCCACCAACAAA 59.695 40.000 0.00 0.00 43.89 2.83
3072 3791 4.833938 GGTAATAAAAGGGTCCACCAACAA 59.166 41.667 0.00 0.00 43.89 2.83
3073 3792 4.140994 TGGTAATAAAAGGGTCCACCAACA 60.141 41.667 0.00 0.00 43.89 3.33
3074 3793 4.409187 TGGTAATAAAAGGGTCCACCAAC 58.591 43.478 0.00 0.00 43.89 3.77
3075 3794 4.743705 TGGTAATAAAAGGGTCCACCAA 57.256 40.909 0.00 0.00 43.89 3.67
3076 3795 4.668636 CTTGGTAATAAAAGGGTCCACCA 58.331 43.478 0.00 0.00 43.89 4.17
3077 3796 3.446161 GCTTGGTAATAAAAGGGTCCACC 59.554 47.826 0.00 0.00 40.67 4.61
3078 3797 3.446161 GGCTTGGTAATAAAAGGGTCCAC 59.554 47.826 0.00 0.00 0.00 4.02
3079 3798 3.076182 TGGCTTGGTAATAAAAGGGTCCA 59.924 43.478 0.00 0.00 0.00 4.02
3080 3799 3.703921 TGGCTTGGTAATAAAAGGGTCC 58.296 45.455 0.00 0.00 0.00 4.46
3081 3800 4.380128 CGTTGGCTTGGTAATAAAAGGGTC 60.380 45.833 0.00 0.00 0.00 4.46
3082 3801 3.508402 CGTTGGCTTGGTAATAAAAGGGT 59.492 43.478 0.00 0.00 0.00 4.34
3083 3802 3.759618 TCGTTGGCTTGGTAATAAAAGGG 59.240 43.478 0.00 0.00 0.00 3.95
3084 3803 4.380128 GGTCGTTGGCTTGGTAATAAAAGG 60.380 45.833 0.00 0.00 0.00 3.11
3085 3804 4.670735 CGGTCGTTGGCTTGGTAATAAAAG 60.671 45.833 0.00 0.00 0.00 2.27
3086 3805 3.188873 CGGTCGTTGGCTTGGTAATAAAA 59.811 43.478 0.00 0.00 0.00 1.52
3087 3806 2.743126 CGGTCGTTGGCTTGGTAATAAA 59.257 45.455 0.00 0.00 0.00 1.40
3088 3807 2.348660 CGGTCGTTGGCTTGGTAATAA 58.651 47.619 0.00 0.00 0.00 1.40
3089 3808 2.008045 GCGGTCGTTGGCTTGGTAATA 61.008 52.381 0.00 0.00 0.00 0.98
3090 3809 1.303091 GCGGTCGTTGGCTTGGTAAT 61.303 55.000 0.00 0.00 0.00 1.89
3091 3810 1.962306 GCGGTCGTTGGCTTGGTAA 60.962 57.895 0.00 0.00 0.00 2.85
3092 3811 2.357760 GCGGTCGTTGGCTTGGTA 60.358 61.111 0.00 0.00 0.00 3.25
3118 3837 4.752879 TACACCGGAGCTTGGCGC 62.753 66.667 9.46 0.00 39.57 6.53
3119 3838 2.047655 TTACACCGGAGCTTGGCG 60.048 61.111 9.46 0.00 0.00 5.69
3120 3839 2.038837 GGTTACACCGGAGCTTGGC 61.039 63.158 9.46 0.00 0.00 4.52
3121 3840 1.376812 GGGTTACACCGGAGCTTGG 60.377 63.158 9.46 4.50 39.83 3.61
3122 3841 4.296265 GGGTTACACCGGAGCTTG 57.704 61.111 9.46 0.00 39.83 4.01
3150 3869 3.976490 AATGACGAGGGAGCGGGGA 62.976 63.158 0.00 0.00 35.12 4.81
3151 3870 3.447025 GAATGACGAGGGAGCGGGG 62.447 68.421 0.00 0.00 35.12 5.73
3152 3871 1.961180 AAGAATGACGAGGGAGCGGG 61.961 60.000 0.00 0.00 35.12 6.13
3153 3872 0.528684 GAAGAATGACGAGGGAGCGG 60.529 60.000 0.00 0.00 35.12 5.52
3154 3873 0.173481 TGAAGAATGACGAGGGAGCG 59.827 55.000 0.00 0.00 37.29 5.03
3155 3874 2.275318 CTTGAAGAATGACGAGGGAGC 58.725 52.381 0.00 0.00 0.00 4.70
3156 3875 3.257393 CACTTGAAGAATGACGAGGGAG 58.743 50.000 0.00 0.00 0.00 4.30
3157 3876 2.612972 GCACTTGAAGAATGACGAGGGA 60.613 50.000 0.00 0.00 0.00 4.20
3158 3877 1.734465 GCACTTGAAGAATGACGAGGG 59.266 52.381 0.00 0.00 0.00 4.30
3159 3878 1.734465 GGCACTTGAAGAATGACGAGG 59.266 52.381 0.00 0.00 0.00 4.63
3162 3881 3.955429 CGGCACTTGAAGAATGACG 57.045 52.632 0.00 0.00 38.74 4.35
3163 3882 1.126846 CGACGGCACTTGAAGAATGAC 59.873 52.381 0.00 0.00 0.00 3.06
3164 3883 1.000394 TCGACGGCACTTGAAGAATGA 60.000 47.619 0.00 0.00 0.00 2.57
3165 3884 1.428448 TCGACGGCACTTGAAGAATG 58.572 50.000 0.00 0.00 0.00 2.67
3166 3885 2.002586 CATCGACGGCACTTGAAGAAT 58.997 47.619 0.00 0.00 0.00 2.40
3167 3886 1.428448 CATCGACGGCACTTGAAGAA 58.572 50.000 0.00 0.00 0.00 2.52
3168 3887 0.389817 CCATCGACGGCACTTGAAGA 60.390 55.000 0.00 0.00 0.00 2.87
3169 3888 0.389817 TCCATCGACGGCACTTGAAG 60.390 55.000 0.00 0.00 0.00 3.02
3170 3889 0.249120 ATCCATCGACGGCACTTGAA 59.751 50.000 0.00 0.00 0.00 2.69
3171 3890 0.460109 CATCCATCGACGGCACTTGA 60.460 55.000 0.00 0.00 0.00 3.02
3172 3891 0.740868 ACATCCATCGACGGCACTTG 60.741 55.000 0.00 0.00 0.00 3.16
3173 3892 0.036388 AACATCCATCGACGGCACTT 60.036 50.000 0.00 0.00 0.00 3.16
3174 3893 0.740868 CAACATCCATCGACGGCACT 60.741 55.000 0.00 0.00 0.00 4.40
3175 3894 1.715585 CAACATCCATCGACGGCAC 59.284 57.895 0.00 0.00 0.00 5.01
3176 3895 2.106074 GCAACATCCATCGACGGCA 61.106 57.895 0.00 0.00 0.00 5.69
3177 3896 2.709475 GCAACATCCATCGACGGC 59.291 61.111 0.00 0.00 0.00 5.68
3178 3897 0.744414 AAGGCAACATCCATCGACGG 60.744 55.000 0.00 0.00 41.41 4.79
3179 3898 0.652592 GAAGGCAACATCCATCGACG 59.347 55.000 0.00 0.00 41.41 5.12
3180 3899 1.398390 GTGAAGGCAACATCCATCGAC 59.602 52.381 0.00 0.00 41.41 4.20
3181 3900 1.678728 GGTGAAGGCAACATCCATCGA 60.679 52.381 0.00 0.00 41.41 3.59
3182 3901 0.734889 GGTGAAGGCAACATCCATCG 59.265 55.000 0.00 0.00 41.41 3.84
3183 3902 0.734889 CGGTGAAGGCAACATCCATC 59.265 55.000 0.00 0.00 41.41 3.51
3184 3903 1.315257 GCGGTGAAGGCAACATCCAT 61.315 55.000 0.00 0.00 41.41 3.41
3185 3904 1.971167 GCGGTGAAGGCAACATCCA 60.971 57.895 0.00 0.00 41.41 3.41
3186 3905 1.315257 ATGCGGTGAAGGCAACATCC 61.315 55.000 0.00 0.00 44.66 3.51
3187 3906 0.527565 AATGCGGTGAAGGCAACATC 59.472 50.000 0.00 0.00 44.66 3.06
3188 3907 0.527565 GAATGCGGTGAAGGCAACAT 59.472 50.000 0.00 0.00 44.66 2.71
3189 3908 1.851021 CGAATGCGGTGAAGGCAACA 61.851 55.000 0.00 0.00 44.66 3.33
3190 3909 1.154225 CGAATGCGGTGAAGGCAAC 60.154 57.895 0.00 0.00 44.66 4.17
3191 3910 1.302112 TCGAATGCGGTGAAGGCAA 60.302 52.632 0.00 0.00 44.66 4.52
3192 3911 2.032634 GTCGAATGCGGTGAAGGCA 61.033 57.895 0.00 0.00 45.71 4.75
3193 3912 2.785258 GTCGAATGCGGTGAAGGC 59.215 61.111 0.00 0.00 38.28 4.35
3194 3913 2.452813 CCGTCGAATGCGGTGAAGG 61.453 63.158 4.86 0.00 43.84 3.46
3195 3914 3.081133 CCGTCGAATGCGGTGAAG 58.919 61.111 4.86 0.00 43.84 3.02
3210 3929 4.678269 AGTGTGCGACGACGTCCG 62.678 66.667 21.63 16.87 45.44 4.79
3211 3930 2.799916 GAGTGTGCGACGACGTCC 60.800 66.667 21.63 14.60 41.98 4.79
3212 3931 3.157523 CGAGTGTGCGACGACGTC 61.158 66.667 18.04 18.04 41.98 4.34
3213 3932 4.678269 CCGAGTGTGCGACGACGT 62.678 66.667 9.33 0.00 41.98 4.34
3215 3934 4.702081 AGCCGAGTGTGCGACGAC 62.702 66.667 0.00 0.00 0.00 4.34
3216 3935 4.400109 GAGCCGAGTGTGCGACGA 62.400 66.667 0.00 0.00 0.00 4.20
3217 3936 4.700365 TGAGCCGAGTGTGCGACG 62.700 66.667 0.00 0.00 0.00 5.12
3218 3937 2.807045 CTGAGCCGAGTGTGCGAC 60.807 66.667 0.00 0.00 0.00 5.19
3219 3938 4.056125 CCTGAGCCGAGTGTGCGA 62.056 66.667 0.00 0.00 0.00 5.10
3220 3939 3.573772 TTCCTGAGCCGAGTGTGCG 62.574 63.158 0.00 0.00 0.00 5.34
3221 3940 1.294659 CTTTCCTGAGCCGAGTGTGC 61.295 60.000 0.00 0.00 0.00 4.57
3222 3941 0.318441 TCTTTCCTGAGCCGAGTGTG 59.682 55.000 0.00 0.00 0.00 3.82
3223 3942 0.605589 CTCTTTCCTGAGCCGAGTGT 59.394 55.000 0.00 0.00 0.00 3.55
3224 3943 0.605589 ACTCTTTCCTGAGCCGAGTG 59.394 55.000 0.00 0.00 37.58 3.51
3225 3944 0.605589 CACTCTTTCCTGAGCCGAGT 59.394 55.000 0.00 0.00 37.58 4.18
3226 3945 0.739112 GCACTCTTTCCTGAGCCGAG 60.739 60.000 0.00 0.00 37.58 4.63
3227 3946 1.293498 GCACTCTTTCCTGAGCCGA 59.707 57.895 0.00 0.00 37.58 5.54
3228 3947 0.392193 ATGCACTCTTTCCTGAGCCG 60.392 55.000 0.00 0.00 37.58 5.52
3229 3948 1.093159 CATGCACTCTTTCCTGAGCC 58.907 55.000 0.00 0.00 37.58 4.70
3230 3949 0.450983 GCATGCACTCTTTCCTGAGC 59.549 55.000 14.21 0.00 37.58 4.26
3231 3950 1.467734 GTGCATGCACTCTTTCCTGAG 59.532 52.381 37.48 0.00 43.12 3.35
3232 3951 1.527034 GTGCATGCACTCTTTCCTGA 58.473 50.000 37.48 2.47 43.12 3.86
3242 3961 2.562912 CCGGTGAAGTGCATGCAC 59.437 61.111 37.87 37.87 46.50 4.57
3243 3962 3.364441 GCCGGTGAAGTGCATGCA 61.364 61.111 18.46 18.46 0.00 3.96
3244 3963 3.364441 TGCCGGTGAAGTGCATGC 61.364 61.111 11.82 11.82 0.00 4.06
3245 3964 2.260154 TGTGCCGGTGAAGTGCATG 61.260 57.895 1.90 0.00 37.34 4.06
3246 3965 2.112928 TGTGCCGGTGAAGTGCAT 59.887 55.556 1.90 0.00 37.34 3.96
3247 3966 2.899838 GTGTGCCGGTGAAGTGCA 60.900 61.111 1.90 0.00 0.00 4.57
3248 3967 3.660111 GGTGTGCCGGTGAAGTGC 61.660 66.667 1.90 0.00 0.00 4.40
3249 3968 2.958578 AAGGGTGTGCCGGTGAAGTG 62.959 60.000 1.90 0.00 34.97 3.16
3250 3969 2.752807 AAGGGTGTGCCGGTGAAGT 61.753 57.895 1.90 0.00 34.97 3.01
3251 3970 2.113139 AAGGGTGTGCCGGTGAAG 59.887 61.111 1.90 0.00 34.97 3.02
3252 3971 2.203280 CAAGGGTGTGCCGGTGAA 60.203 61.111 1.90 0.00 34.97 3.18
3253 3972 4.947147 GCAAGGGTGTGCCGGTGA 62.947 66.667 1.90 0.00 38.66 4.02
3254 3973 4.954970 AGCAAGGGTGTGCCGGTG 62.955 66.667 1.90 0.00 46.14 4.94
3255 3974 4.643387 GAGCAAGGGTGTGCCGGT 62.643 66.667 1.90 0.00 46.14 5.28
3276 3995 2.753446 GCTTCCCTCAGCCAAGGC 60.753 66.667 2.02 2.02 42.33 4.35
3277 3996 2.437359 CGCTTCCCTCAGCCAAGG 60.437 66.667 0.00 0.00 36.31 3.61
3278 3997 0.606401 TTTCGCTTCCCTCAGCCAAG 60.606 55.000 0.00 0.00 36.31 3.61
3279 3998 0.606401 CTTTCGCTTCCCTCAGCCAA 60.606 55.000 0.00 0.00 36.31 4.52
3280 3999 1.003355 CTTTCGCTTCCCTCAGCCA 60.003 57.895 0.00 0.00 36.31 4.75
3281 4000 2.402572 GCTTTCGCTTCCCTCAGCC 61.403 63.158 0.00 0.00 36.31 4.85
3282 4001 2.402572 GGCTTTCGCTTCCCTCAGC 61.403 63.158 0.00 0.00 36.09 4.26
3283 4002 1.003355 TGGCTTTCGCTTCCCTCAG 60.003 57.895 0.00 0.00 36.09 3.35
3284 4003 1.302511 GTGGCTTTCGCTTCCCTCA 60.303 57.895 0.00 0.00 36.09 3.86
3285 4004 2.391389 CGTGGCTTTCGCTTCCCTC 61.391 63.158 0.00 0.00 36.09 4.30
3286 4005 2.358737 CGTGGCTTTCGCTTCCCT 60.359 61.111 0.00 0.00 36.09 4.20
3294 4013 4.043200 GTGGCTGGCGTGGCTTTC 62.043 66.667 0.00 0.00 0.00 2.62
3761 4480 1.334243 GTCGTCGACCTTAGAGGGATG 59.666 57.143 14.60 0.00 40.58 3.51
3762 4481 1.677942 GTCGTCGACCTTAGAGGGAT 58.322 55.000 14.60 0.00 40.58 3.85
3763 4482 3.165606 GTCGTCGACCTTAGAGGGA 57.834 57.895 14.60 0.00 40.58 4.20
3773 4492 1.232119 ATTTTTGGGTGGTCGTCGAC 58.768 50.000 17.16 17.16 0.00 4.20
3774 4493 1.874872 GAATTTTTGGGTGGTCGTCGA 59.125 47.619 0.00 0.00 0.00 4.20
3775 4494 1.068816 GGAATTTTTGGGTGGTCGTCG 60.069 52.381 0.00 0.00 0.00 5.12
3776 4495 1.271379 GGGAATTTTTGGGTGGTCGTC 59.729 52.381 0.00 0.00 0.00 4.20
3777 4496 1.334160 GGGAATTTTTGGGTGGTCGT 58.666 50.000 0.00 0.00 0.00 4.34
3778 4497 0.242555 CGGGAATTTTTGGGTGGTCG 59.757 55.000 0.00 0.00 0.00 4.79
3779 4498 0.606096 CCGGGAATTTTTGGGTGGTC 59.394 55.000 0.00 0.00 0.00 4.02
3780 4499 1.476845 GCCGGGAATTTTTGGGTGGT 61.477 55.000 2.18 0.00 0.00 4.16
3781 4500 1.295101 GCCGGGAATTTTTGGGTGG 59.705 57.895 2.18 0.00 0.00 4.61
3782 4501 1.080161 CGCCGGGAATTTTTGGGTG 60.080 57.895 2.18 0.00 0.00 4.61
3783 4502 0.828343 TTCGCCGGGAATTTTTGGGT 60.828 50.000 2.18 0.00 0.00 4.51
3784 4503 0.389296 GTTCGCCGGGAATTTTTGGG 60.389 55.000 2.18 0.00 36.92 4.12
3785 4504 0.389296 GGTTCGCCGGGAATTTTTGG 60.389 55.000 2.18 0.00 36.92 3.28
3786 4505 0.601057 AGGTTCGCCGGGAATTTTTG 59.399 50.000 2.18 0.00 43.66 2.44
3787 4506 0.601057 CAGGTTCGCCGGGAATTTTT 59.399 50.000 2.18 0.00 43.66 1.94
3788 4507 1.873270 GCAGGTTCGCCGGGAATTTT 61.873 55.000 2.18 0.00 43.66 1.82
3789 4508 2.340328 GCAGGTTCGCCGGGAATTT 61.340 57.895 2.18 0.00 43.66 1.82
3790 4509 2.750237 GCAGGTTCGCCGGGAATT 60.750 61.111 2.18 0.00 43.66 2.17
3791 4510 3.344137 ATGCAGGTTCGCCGGGAAT 62.344 57.895 2.18 0.00 43.66 3.01
3792 4511 3.969250 GATGCAGGTTCGCCGGGAA 62.969 63.158 2.18 1.87 43.66 3.97
3793 4512 4.467084 GATGCAGGTTCGCCGGGA 62.467 66.667 2.18 0.00 43.66 5.14
3795 4514 4.776322 TGGATGCAGGTTCGCCGG 62.776 66.667 0.00 0.00 43.66 6.13
3796 4515 3.499737 GTGGATGCAGGTTCGCCG 61.500 66.667 0.00 0.00 43.66 6.46
3797 4516 3.134127 GGTGGATGCAGGTTCGCC 61.134 66.667 0.00 0.00 37.60 5.54
3798 4517 2.359850 TGGTGGATGCAGGTTCGC 60.360 61.111 0.00 0.00 0.00 4.70
3799 4518 2.040544 GGTGGTGGATGCAGGTTCG 61.041 63.158 0.00 0.00 0.00 3.95
3800 4519 1.678970 GGGTGGTGGATGCAGGTTC 60.679 63.158 0.00 0.00 0.00 3.62
3801 4520 0.844661 TAGGGTGGTGGATGCAGGTT 60.845 55.000 0.00 0.00 0.00 3.50
3802 4521 0.844661 TTAGGGTGGTGGATGCAGGT 60.845 55.000 0.00 0.00 0.00 4.00
3803 4522 0.331278 TTTAGGGTGGTGGATGCAGG 59.669 55.000 0.00 0.00 0.00 4.85
3804 4523 1.818674 GTTTTAGGGTGGTGGATGCAG 59.181 52.381 0.00 0.00 0.00 4.41
3805 4524 1.145945 TGTTTTAGGGTGGTGGATGCA 59.854 47.619 0.00 0.00 0.00 3.96
3806 4525 1.818674 CTGTTTTAGGGTGGTGGATGC 59.181 52.381 0.00 0.00 0.00 3.91
3807 4526 3.433306 TCTGTTTTAGGGTGGTGGATG 57.567 47.619 0.00 0.00 0.00 3.51
3808 4527 4.788617 ACTATCTGTTTTAGGGTGGTGGAT 59.211 41.667 0.00 0.00 0.00 3.41
3809 4528 4.019681 CACTATCTGTTTTAGGGTGGTGGA 60.020 45.833 0.00 0.00 0.00 4.02
3810 4529 4.261801 CACTATCTGTTTTAGGGTGGTGG 58.738 47.826 0.00 0.00 0.00 4.61
3811 4530 4.261801 CCACTATCTGTTTTAGGGTGGTG 58.738 47.826 0.00 0.00 37.27 4.17
3812 4531 3.265995 CCCACTATCTGTTTTAGGGTGGT 59.734 47.826 0.00 0.00 38.74 4.16
3813 4532 3.371595 CCCCACTATCTGTTTTAGGGTGG 60.372 52.174 0.00 0.00 39.39 4.61
3814 4533 3.265995 ACCCCACTATCTGTTTTAGGGTG 59.734 47.826 0.00 0.00 44.84 4.61
3815 4534 3.538387 ACCCCACTATCTGTTTTAGGGT 58.462 45.455 0.00 0.00 41.76 4.34
3816 4535 4.270008 CAACCCCACTATCTGTTTTAGGG 58.730 47.826 0.00 0.00 39.33 3.53
3817 4536 3.694566 GCAACCCCACTATCTGTTTTAGG 59.305 47.826 0.00 0.00 0.00 2.69
3818 4537 4.589908 AGCAACCCCACTATCTGTTTTAG 58.410 43.478 0.00 0.00 0.00 1.85
3819 4538 4.650972 AGCAACCCCACTATCTGTTTTA 57.349 40.909 0.00 0.00 0.00 1.52
3820 4539 3.525800 AGCAACCCCACTATCTGTTTT 57.474 42.857 0.00 0.00 0.00 2.43
3821 4540 3.074538 AGAAGCAACCCCACTATCTGTTT 59.925 43.478 0.00 0.00 0.00 2.83
3822 4541 2.644798 AGAAGCAACCCCACTATCTGTT 59.355 45.455 0.00 0.00 0.00 3.16
3823 4542 2.237392 GAGAAGCAACCCCACTATCTGT 59.763 50.000 0.00 0.00 0.00 3.41
3824 4543 2.420687 GGAGAAGCAACCCCACTATCTG 60.421 54.545 0.00 0.00 0.00 2.90
3825 4544 1.840635 GGAGAAGCAACCCCACTATCT 59.159 52.381 0.00 0.00 0.00 1.98
3826 4545 1.473434 CGGAGAAGCAACCCCACTATC 60.473 57.143 0.00 0.00 0.00 2.08
3827 4546 0.541863 CGGAGAAGCAACCCCACTAT 59.458 55.000 0.00 0.00 0.00 2.12
3828 4547 1.550130 CCGGAGAAGCAACCCCACTA 61.550 60.000 0.00 0.00 0.00 2.74
3829 4548 2.750350 CGGAGAAGCAACCCCACT 59.250 61.111 0.00 0.00 0.00 4.00
3830 4549 2.359975 CCGGAGAAGCAACCCCAC 60.360 66.667 0.00 0.00 0.00 4.61
3831 4550 4.344865 GCCGGAGAAGCAACCCCA 62.345 66.667 5.05 0.00 0.00 4.96
3833 4552 3.894547 TTCGCCGGAGAAGCAACCC 62.895 63.158 17.34 0.00 0.00 4.11
3834 4553 2.358247 TTCGCCGGAGAAGCAACC 60.358 61.111 17.34 0.00 0.00 3.77
3835 4554 1.228657 AAGTTCGCCGGAGAAGCAAC 61.229 55.000 21.74 10.28 0.00 4.17
3836 4555 1.070786 AAGTTCGCCGGAGAAGCAA 59.929 52.632 21.74 0.00 0.00 3.91
3837 4556 1.667830 CAAGTTCGCCGGAGAAGCA 60.668 57.895 21.74 0.00 0.00 3.91
3838 4557 3.028366 GCAAGTTCGCCGGAGAAGC 62.028 63.158 21.74 17.00 0.00 3.86
3839 4558 1.667830 TGCAAGTTCGCCGGAGAAG 60.668 57.895 21.74 10.92 0.00 2.85
3840 4559 1.959226 GTGCAAGTTCGCCGGAGAA 60.959 57.895 17.34 17.34 0.00 2.87
3841 4560 2.357034 GTGCAAGTTCGCCGGAGA 60.357 61.111 5.05 3.81 0.00 3.71
3842 4561 3.423154 GGTGCAAGTTCGCCGGAG 61.423 66.667 5.05 0.00 0.00 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.