Multiple sequence alignment - TraesCS1A01G093700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G093700 chr1A 100.000 3066 0 0 1 3066 86635708 86638773 0.000000e+00 5662
1 TraesCS1A01G093700 chr1A 80.967 972 148 20 1258 2197 85826390 85827356 0.000000e+00 736
2 TraesCS1A01G093700 chr1A 85.185 594 74 8 1673 2254 85905428 85906019 5.660000e-167 597
3 TraesCS1A01G093700 chr1A 84.967 153 22 1 2906 3057 262015737 262015889 1.470000e-33 154
4 TraesCS1A01G093700 chr1D 95.436 1468 45 8 992 2442 90632526 90633988 0.000000e+00 2320
5 TraesCS1A01G093700 chr1D 88.277 1706 138 35 771 2442 90637028 90638705 0.000000e+00 1986
6 TraesCS1A01G093700 chr1D 80.645 1085 190 10 1187 2256 89560440 89561519 0.000000e+00 822
7 TraesCS1A01G093700 chr1D 80.190 1050 173 15 1181 2207 89990331 89991368 0.000000e+00 754
8 TraesCS1A01G093700 chr1D 90.084 474 39 8 2444 2915 90638747 90639214 2.610000e-170 608
9 TraesCS1A01G093700 chr1D 88.922 334 33 3 2728 3057 90634267 90634600 2.850000e-110 409
10 TraesCS1A01G093700 chr1D 95.510 245 10 1 2444 2688 90634030 90634273 1.030000e-104 390
11 TraesCS1A01G093700 chr1D 96.591 176 6 0 780 955 90632348 90632523 2.990000e-75 292
12 TraesCS1A01G093700 chr1D 89.447 199 12 3 1674 1863 89601986 89602184 3.050000e-60 243
13 TraesCS1A01G093700 chr1D 88.667 150 15 2 2916 3063 101104164 101104313 6.750000e-42 182
14 TraesCS1A01G093700 chr1D 83.422 187 21 7 2738 2915 90638665 90638850 6.800000e-37 165
15 TraesCS1A01G093700 chr1D 82.979 188 21 7 2738 2915 90633948 90634134 3.160000e-35 159
16 TraesCS1A01G093700 chr1B 95.095 1264 46 5 992 2245 145359615 145360872 0.000000e+00 1977
17 TraesCS1A01G093700 chr1B 81.256 1035 171 11 1184 2207 143112316 143111294 0.000000e+00 815
18 TraesCS1A01G093700 chr1B 80.874 732 109 21 1648 2358 143041374 143040653 5.780000e-152 547
19 TraesCS1A01G093700 chr1B 84.342 479 67 7 1753 2226 143053668 143053193 2.150000e-126 462
20 TraesCS1A01G093700 chr1B 80.067 597 100 13 1171 1752 143057814 143057222 2.830000e-115 425
21 TraesCS1A01G093700 chr1B 93.596 203 9 2 2243 2442 145360975 145361176 1.790000e-77 300
22 TraesCS1A01G093700 chr1B 94.211 190 7 3 770 955 145359423 145359612 1.390000e-73 287
23 TraesCS1A01G093700 chr1B 86.755 151 17 3 2916 3063 150543395 150543245 6.800000e-37 165
24 TraesCS1A01G093700 chr2B 90.036 552 32 8 213 743 95340355 95340904 0.000000e+00 693
25 TraesCS1A01G093700 chr2B 91.509 212 18 0 1 212 756592705 756592916 2.990000e-75 292
26 TraesCS1A01G093700 chr2B 91.038 212 19 0 1 212 689757856 689758067 1.390000e-73 287
27 TraesCS1A01G093700 chr2B 87.413 143 17 1 2916 3057 335806314 335806456 2.450000e-36 163
28 TraesCS1A01G093700 chr6D 89.071 549 42 11 213 746 22137474 22136929 0.000000e+00 665
29 TraesCS1A01G093700 chr6D 88.112 143 16 1 2916 3057 378032344 378032486 5.260000e-38 169
30 TraesCS1A01G093700 chr4D 88.214 543 41 13 213 746 82495444 82494916 7.220000e-176 627
31 TraesCS1A01G093700 chr4D 88.192 542 40 14 216 746 57896940 57896412 2.600000e-175 625
32 TraesCS1A01G093700 chr4D 83.051 413 54 12 353 750 49300655 49301066 8.080000e-96 361
33 TraesCS1A01G093700 chr4D 90.351 114 10 1 771 884 44438555 44438443 6.850000e-32 148
34 TraesCS1A01G093700 chr7A 88.148 540 44 10 221 746 241177270 241176737 2.600000e-175 625
35 TraesCS1A01G093700 chr7A 92.453 212 14 2 2 212 129068633 129068423 4.970000e-78 302
36 TraesCS1A01G093700 chr5D 87.706 545 47 9 215 743 558062252 558062792 4.340000e-173 617
37 TraesCS1A01G093700 chr5D 86.188 543 54 13 213 743 3232379 3232912 4.440000e-158 568
38 TraesCS1A01G093700 chr5D 85.872 545 56 12 213 748 71886102 71886634 7.420000e-156 560
39 TraesCS1A01G093700 chr3A 87.269 487 42 10 269 746 712136100 712135625 3.480000e-149 538
40 TraesCS1A01G093700 chr3A 86.301 146 19 1 2913 3057 724897555 724897700 1.140000e-34 158
41 TraesCS1A01G093700 chr3D 87.583 451 39 12 304 743 330911593 330912037 9.810000e-140 507
42 TraesCS1A01G093700 chr7B 94.340 212 12 0 1 212 641526544 641526755 2.950000e-85 326
43 TraesCS1A01G093700 chr4A 93.396 212 14 0 1 212 690669625 690669414 6.380000e-82 315
44 TraesCS1A01G093700 chr6A 91.943 211 14 1 1 211 142083569 142083362 2.990000e-75 292
45 TraesCS1A01G093700 chr6A 89.767 215 17 5 2 212 133779887 133780100 1.400000e-68 270
46 TraesCS1A01G093700 chr2A 90.141 213 20 1 1 212 269916476 269916264 3.010000e-70 276
47 TraesCS1A01G093700 chr3B 88.679 212 24 0 1 212 751785774 751785563 3.030000e-65 259
48 TraesCS1A01G093700 chr3B 88.356 146 16 1 2913 3057 227430732 227430877 1.130000e-39 174
49 TraesCS1A01G093700 chr7D 88.811 143 15 1 2916 3057 53975567 53975425 1.130000e-39 174


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G093700 chr1A 86635708 86638773 3065 False 5662.000000 5662 100.000000 1 3066 1 chr1A.!!$F3 3065
1 TraesCS1A01G093700 chr1A 85826390 85827356 966 False 736.000000 736 80.967000 1258 2197 1 chr1A.!!$F1 939
2 TraesCS1A01G093700 chr1A 85905428 85906019 591 False 597.000000 597 85.185000 1673 2254 1 chr1A.!!$F2 581
3 TraesCS1A01G093700 chr1D 89560440 89561519 1079 False 822.000000 822 80.645000 1187 2256 1 chr1D.!!$F1 1069
4 TraesCS1A01G093700 chr1D 90632348 90639214 6866 False 791.125000 2320 90.152625 771 3057 8 chr1D.!!$F5 2286
5 TraesCS1A01G093700 chr1D 89990331 89991368 1037 False 754.000000 754 80.190000 1181 2207 1 chr1D.!!$F3 1026
6 TraesCS1A01G093700 chr1B 145359423 145361176 1753 False 854.666667 1977 94.300667 770 2442 3 chr1B.!!$F1 1672
7 TraesCS1A01G093700 chr1B 143111294 143112316 1022 True 815.000000 815 81.256000 1184 2207 1 chr1B.!!$R2 1023
8 TraesCS1A01G093700 chr1B 143040653 143041374 721 True 547.000000 547 80.874000 1648 2358 1 chr1B.!!$R1 710
9 TraesCS1A01G093700 chr1B 143053193 143057814 4621 True 443.500000 462 82.204500 1171 2226 2 chr1B.!!$R4 1055
10 TraesCS1A01G093700 chr2B 95340355 95340904 549 False 693.000000 693 90.036000 213 743 1 chr2B.!!$F1 530
11 TraesCS1A01G093700 chr6D 22136929 22137474 545 True 665.000000 665 89.071000 213 746 1 chr6D.!!$R1 533
12 TraesCS1A01G093700 chr4D 82494916 82495444 528 True 627.000000 627 88.214000 213 746 1 chr4D.!!$R3 533
13 TraesCS1A01G093700 chr4D 57896412 57896940 528 True 625.000000 625 88.192000 216 746 1 chr4D.!!$R2 530
14 TraesCS1A01G093700 chr7A 241176737 241177270 533 True 625.000000 625 88.148000 221 746 1 chr7A.!!$R2 525
15 TraesCS1A01G093700 chr5D 558062252 558062792 540 False 617.000000 617 87.706000 215 743 1 chr5D.!!$F3 528
16 TraesCS1A01G093700 chr5D 3232379 3232912 533 False 568.000000 568 86.188000 213 743 1 chr5D.!!$F1 530
17 TraesCS1A01G093700 chr5D 71886102 71886634 532 False 560.000000 560 85.872000 213 748 1 chr5D.!!$F2 535


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
116 117 0.037232 GCGGATAGATCCTTTCCCCG 60.037 60.0 6.97 0.0 44.93 5.73 F
118 119 0.037232 GGATAGATCCTTTCCCCGCG 60.037 60.0 0.00 0.0 43.73 6.46 F
967 1018 0.039617 CATCTCCTCTCACCGATCGC 60.040 60.0 10.32 0.0 0.00 4.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1168 1220 0.036952 CCACACTGATGTTCTCCGCT 60.037 55.0 0.00 0.00 36.72 5.52 R
1905 10249 0.600255 CAGTGAATACCGATCGGCCC 60.600 60.0 33.62 19.34 39.32 5.80 R
2882 11384 0.657840 CTGGGCTATGCAAACGCTAC 59.342 55.0 0.00 0.00 0.00 3.58 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.602472 TTCTTTTATGTTATATTGGGCAGGTT 57.398 30.769 0.00 0.00 0.00 3.50
26 27 8.602472 TCTTTTATGTTATATTGGGCAGGTTT 57.398 30.769 0.00 0.00 0.00 3.27
27 28 8.474025 TCTTTTATGTTATATTGGGCAGGTTTG 58.526 33.333 0.00 0.00 0.00 2.93
41 42 5.376854 GCAGGTTTGCTTAAAGAAGATGA 57.623 39.130 0.00 0.00 46.95 2.92
42 43 5.958955 GCAGGTTTGCTTAAAGAAGATGAT 58.041 37.500 0.00 0.00 46.95 2.45
43 44 7.088589 GCAGGTTTGCTTAAAGAAGATGATA 57.911 36.000 0.00 0.00 46.95 2.15
44 45 7.538575 GCAGGTTTGCTTAAAGAAGATGATAA 58.461 34.615 0.00 0.00 46.95 1.75
45 46 7.699812 GCAGGTTTGCTTAAAGAAGATGATAAG 59.300 37.037 0.00 0.00 46.95 1.73
46 47 8.950210 CAGGTTTGCTTAAAGAAGATGATAAGA 58.050 33.333 0.00 0.00 34.25 2.10
47 48 9.692325 AGGTTTGCTTAAAGAAGATGATAAGAT 57.308 29.630 0.00 0.00 34.25 2.40
48 49 9.727627 GGTTTGCTTAAAGAAGATGATAAGATG 57.272 33.333 0.00 0.00 34.25 2.90
52 53 9.896645 TGCTTAAAGAAGATGATAAGATGAAGT 57.103 29.630 0.00 0.00 34.25 3.01
57 58 8.961294 AAGAAGATGATAAGATGAAGTTCCAG 57.039 34.615 0.00 0.00 0.00 3.86
58 59 8.316497 AGAAGATGATAAGATGAAGTTCCAGA 57.684 34.615 0.00 0.00 0.00 3.86
59 60 8.203485 AGAAGATGATAAGATGAAGTTCCAGAC 58.797 37.037 0.00 0.00 0.00 3.51
60 61 7.673641 AGATGATAAGATGAAGTTCCAGACT 57.326 36.000 0.00 0.00 41.47 3.24
61 62 7.499292 AGATGATAAGATGAAGTTCCAGACTG 58.501 38.462 0.00 0.00 39.00 3.51
62 63 5.982356 TGATAAGATGAAGTTCCAGACTGG 58.018 41.667 15.99 15.99 39.00 4.00
63 64 5.485353 TGATAAGATGAAGTTCCAGACTGGT 59.515 40.000 21.06 1.26 39.00 4.00
64 65 3.692257 AGATGAAGTTCCAGACTGGTG 57.308 47.619 21.06 0.00 39.00 4.17
65 66 2.975489 AGATGAAGTTCCAGACTGGTGT 59.025 45.455 21.06 4.40 39.00 4.16
66 67 2.620251 TGAAGTTCCAGACTGGTGTG 57.380 50.000 21.06 0.00 39.00 3.82
67 68 2.115427 TGAAGTTCCAGACTGGTGTGA 58.885 47.619 21.06 0.00 39.00 3.58
68 69 2.503765 TGAAGTTCCAGACTGGTGTGAA 59.496 45.455 21.06 5.33 39.00 3.18
69 70 2.918712 AGTTCCAGACTGGTGTGAAG 57.081 50.000 21.06 0.00 39.03 3.02
70 71 2.398588 AGTTCCAGACTGGTGTGAAGA 58.601 47.619 21.06 0.00 39.03 2.87
71 72 2.366916 AGTTCCAGACTGGTGTGAAGAG 59.633 50.000 21.06 0.00 39.03 2.85
72 73 2.365617 GTTCCAGACTGGTGTGAAGAGA 59.634 50.000 21.06 0.00 39.03 3.10
73 74 2.894731 TCCAGACTGGTGTGAAGAGAT 58.105 47.619 21.06 0.00 39.03 2.75
74 75 3.242867 TCCAGACTGGTGTGAAGAGATT 58.757 45.455 21.06 0.00 39.03 2.40
75 76 3.007290 TCCAGACTGGTGTGAAGAGATTG 59.993 47.826 21.06 0.00 39.03 2.67
76 77 3.332919 CAGACTGGTGTGAAGAGATTGG 58.667 50.000 0.00 0.00 0.00 3.16
77 78 2.079925 GACTGGTGTGAAGAGATTGGC 58.920 52.381 0.00 0.00 0.00 4.52
78 79 1.701847 ACTGGTGTGAAGAGATTGGCT 59.298 47.619 0.00 0.00 0.00 4.75
79 80 2.289945 ACTGGTGTGAAGAGATTGGCTC 60.290 50.000 0.00 0.00 44.29 4.70
80 81 1.699083 TGGTGTGAAGAGATTGGCTCA 59.301 47.619 0.00 0.00 46.45 4.26
81 82 2.306805 TGGTGTGAAGAGATTGGCTCAT 59.693 45.455 0.00 0.00 46.45 2.90
82 83 2.681848 GGTGTGAAGAGATTGGCTCATG 59.318 50.000 0.00 0.00 46.45 3.07
83 84 2.097142 GTGTGAAGAGATTGGCTCATGC 59.903 50.000 0.00 0.00 46.45 4.06
84 85 1.329906 GTGAAGAGATTGGCTCATGCG 59.670 52.381 0.00 0.00 46.45 4.73
85 86 0.942962 GAAGAGATTGGCTCATGCGG 59.057 55.000 0.00 0.00 46.45 5.69
86 87 1.099879 AAGAGATTGGCTCATGCGGC 61.100 55.000 1.64 1.64 46.45 6.53
87 88 1.525535 GAGATTGGCTCATGCGGCT 60.526 57.895 10.83 0.00 43.38 5.52
88 89 1.783031 GAGATTGGCTCATGCGGCTG 61.783 60.000 10.83 0.00 43.38 4.85
89 90 3.480225 GATTGGCTCATGCGGCTGC 62.480 63.158 11.65 11.65 40.82 5.25
90 91 4.728110 TTGGCTCATGCGGCTGCT 62.728 61.111 20.27 0.83 43.34 4.24
108 109 3.631453 TGCATTGGCGGATAGATCC 57.369 52.632 0.00 0.00 45.35 3.36
109 110 1.059098 TGCATTGGCGGATAGATCCT 58.941 50.000 6.97 0.00 44.93 3.24
110 111 1.421268 TGCATTGGCGGATAGATCCTT 59.579 47.619 6.97 0.00 44.93 3.36
111 112 2.158623 TGCATTGGCGGATAGATCCTTT 60.159 45.455 6.97 0.00 44.93 3.11
112 113 2.485814 GCATTGGCGGATAGATCCTTTC 59.514 50.000 6.97 0.00 44.93 2.62
113 114 2.930826 TTGGCGGATAGATCCTTTCC 57.069 50.000 6.97 5.88 44.93 3.13
114 115 1.056660 TGGCGGATAGATCCTTTCCC 58.943 55.000 6.97 3.06 44.93 3.97
115 116 0.325272 GGCGGATAGATCCTTTCCCC 59.675 60.000 6.97 0.00 44.93 4.81
116 117 0.037232 GCGGATAGATCCTTTCCCCG 60.037 60.000 6.97 0.00 44.93 5.73
117 118 0.037232 CGGATAGATCCTTTCCCCGC 60.037 60.000 6.97 0.00 44.93 6.13
118 119 0.037232 GGATAGATCCTTTCCCCGCG 60.037 60.000 0.00 0.00 43.73 6.46
119 120 0.037232 GATAGATCCTTTCCCCGCGG 60.037 60.000 21.04 21.04 0.00 6.46
120 121 2.113243 ATAGATCCTTTCCCCGCGGC 62.113 60.000 22.85 1.85 0.00 6.53
121 122 4.483243 GATCCTTTCCCCGCGGCA 62.483 66.667 22.85 4.98 0.00 5.69
122 123 4.489771 ATCCTTTCCCCGCGGCAG 62.490 66.667 22.85 13.98 0.00 4.85
125 126 4.394712 CTTTCCCCGCGGCAGACT 62.395 66.667 22.85 0.00 0.00 3.24
126 127 4.388499 TTTCCCCGCGGCAGACTC 62.388 66.667 22.85 0.00 0.00 3.36
132 133 4.200283 CGCGGCAGACTCCTCCTC 62.200 72.222 0.00 0.00 0.00 3.71
133 134 4.200283 GCGGCAGACTCCTCCTCG 62.200 72.222 0.00 0.00 0.00 4.63
134 135 3.522731 CGGCAGACTCCTCCTCGG 61.523 72.222 0.00 0.00 0.00 4.63
135 136 3.844090 GGCAGACTCCTCCTCGGC 61.844 72.222 0.00 0.00 0.00 5.54
136 137 4.200283 GCAGACTCCTCCTCGGCG 62.200 72.222 0.00 0.00 0.00 6.46
137 138 2.438614 CAGACTCCTCCTCGGCGA 60.439 66.667 10.14 10.14 0.00 5.54
138 139 2.438795 AGACTCCTCCTCGGCGAC 60.439 66.667 4.99 0.00 0.00 5.19
139 140 2.750637 GACTCCTCCTCGGCGACA 60.751 66.667 4.99 0.00 0.00 4.35
140 141 2.282958 ACTCCTCCTCGGCGACAA 60.283 61.111 4.99 0.00 0.00 3.18
141 142 1.668101 GACTCCTCCTCGGCGACAAT 61.668 60.000 4.99 0.00 0.00 2.71
142 143 1.227089 CTCCTCCTCGGCGACAATG 60.227 63.158 4.99 0.00 0.00 2.82
143 144 1.667154 CTCCTCCTCGGCGACAATGA 61.667 60.000 4.99 0.00 0.00 2.57
144 145 1.043116 TCCTCCTCGGCGACAATGAT 61.043 55.000 4.99 0.00 0.00 2.45
145 146 0.877649 CCTCCTCGGCGACAATGATG 60.878 60.000 4.99 0.00 0.00 3.07
146 147 0.877649 CTCCTCGGCGACAATGATGG 60.878 60.000 4.99 3.76 0.00 3.51
147 148 1.889105 CCTCGGCGACAATGATGGG 60.889 63.158 4.99 0.00 0.00 4.00
148 149 1.143838 CTCGGCGACAATGATGGGA 59.856 57.895 4.99 0.00 0.00 4.37
149 150 0.250038 CTCGGCGACAATGATGGGAT 60.250 55.000 4.99 0.00 0.00 3.85
150 151 0.249868 TCGGCGACAATGATGGGATC 60.250 55.000 4.99 0.00 0.00 3.36
151 152 1.230635 CGGCGACAATGATGGGATCC 61.231 60.000 0.00 1.92 0.00 3.36
152 153 0.179020 GGCGACAATGATGGGATCCA 60.179 55.000 15.23 0.00 38.19 3.41
153 154 1.233019 GCGACAATGATGGGATCCAG 58.767 55.000 15.23 0.00 36.75 3.86
154 155 1.202687 GCGACAATGATGGGATCCAGA 60.203 52.381 15.23 0.00 36.75 3.86
155 156 2.551721 GCGACAATGATGGGATCCAGAT 60.552 50.000 15.23 4.48 36.75 2.90
156 157 3.332919 CGACAATGATGGGATCCAGATC 58.667 50.000 15.23 14.31 36.75 2.75
157 158 3.332919 GACAATGATGGGATCCAGATCG 58.667 50.000 15.23 4.75 36.75 3.69
158 159 2.039480 ACAATGATGGGATCCAGATCGG 59.961 50.000 15.23 9.99 36.75 4.18
159 160 0.617413 ATGATGGGATCCAGATCGGC 59.383 55.000 15.23 0.00 36.75 5.54
160 161 0.472543 TGATGGGATCCAGATCGGCT 60.473 55.000 15.23 0.00 36.75 5.52
161 162 1.203174 TGATGGGATCCAGATCGGCTA 60.203 52.381 15.23 0.00 36.75 3.93
162 163 1.480137 GATGGGATCCAGATCGGCTAG 59.520 57.143 15.23 0.00 36.75 3.42
163 164 1.188219 TGGGATCCAGATCGGCTAGC 61.188 60.000 15.23 6.04 38.69 3.42
164 165 0.902516 GGGATCCAGATCGGCTAGCT 60.903 60.000 15.72 0.00 38.69 3.32
165 166 0.246086 GGATCCAGATCGGCTAGCTG 59.754 60.000 17.99 17.99 41.47 4.24
166 167 1.252175 GATCCAGATCGGCTAGCTGA 58.748 55.000 27.89 27.89 44.73 4.26
167 168 1.202114 GATCCAGATCGGCTAGCTGAG 59.798 57.143 29.04 16.73 44.73 3.35
176 177 4.416533 CTAGCTGAGCTTCGCTGG 57.583 61.111 14.14 12.55 39.88 4.85
177 178 1.515020 CTAGCTGAGCTTCGCTGGT 59.485 57.895 14.14 4.70 39.88 4.00
178 179 0.805322 CTAGCTGAGCTTCGCTGGTG 60.805 60.000 14.14 6.98 39.88 4.17
179 180 1.536073 TAGCTGAGCTTCGCTGGTGT 61.536 55.000 14.14 0.00 39.88 4.16
180 181 1.963338 GCTGAGCTTCGCTGGTGTT 60.963 57.895 0.00 0.00 39.88 3.32
181 182 1.510480 GCTGAGCTTCGCTGGTGTTT 61.510 55.000 0.00 0.00 39.88 2.83
182 183 0.947244 CTGAGCTTCGCTGGTGTTTT 59.053 50.000 0.00 0.00 39.88 2.43
183 184 0.944386 TGAGCTTCGCTGGTGTTTTC 59.056 50.000 0.00 0.00 39.88 2.29
184 185 1.230324 GAGCTTCGCTGGTGTTTTCT 58.770 50.000 0.00 0.00 39.88 2.52
185 186 0.947244 AGCTTCGCTGGTGTTTTCTG 59.053 50.000 0.00 0.00 37.57 3.02
186 187 0.944386 GCTTCGCTGGTGTTTTCTGA 59.056 50.000 0.00 0.00 0.00 3.27
187 188 1.537202 GCTTCGCTGGTGTTTTCTGAT 59.463 47.619 0.00 0.00 0.00 2.90
188 189 2.413371 GCTTCGCTGGTGTTTTCTGATC 60.413 50.000 0.00 0.00 0.00 2.92
189 190 2.839486 TCGCTGGTGTTTTCTGATCT 57.161 45.000 0.00 0.00 0.00 2.75
190 191 3.126001 TCGCTGGTGTTTTCTGATCTT 57.874 42.857 0.00 0.00 0.00 2.40
191 192 2.807967 TCGCTGGTGTTTTCTGATCTTG 59.192 45.455 0.00 0.00 0.00 3.02
192 193 2.666619 CGCTGGTGTTTTCTGATCTTGC 60.667 50.000 0.00 0.00 0.00 4.01
193 194 2.352127 GCTGGTGTTTTCTGATCTTGCC 60.352 50.000 0.00 0.00 0.00 4.52
194 195 3.152341 CTGGTGTTTTCTGATCTTGCCT 58.848 45.455 0.00 0.00 0.00 4.75
195 196 3.565307 TGGTGTTTTCTGATCTTGCCTT 58.435 40.909 0.00 0.00 0.00 4.35
196 197 3.569701 TGGTGTTTTCTGATCTTGCCTTC 59.430 43.478 0.00 0.00 0.00 3.46
197 198 3.057245 GGTGTTTTCTGATCTTGCCTTCC 60.057 47.826 0.00 0.00 0.00 3.46
198 199 3.569701 GTGTTTTCTGATCTTGCCTTCCA 59.430 43.478 0.00 0.00 0.00 3.53
199 200 3.569701 TGTTTTCTGATCTTGCCTTCCAC 59.430 43.478 0.00 0.00 0.00 4.02
200 201 3.795688 TTTCTGATCTTGCCTTCCACT 57.204 42.857 0.00 0.00 0.00 4.00
201 202 2.775911 TCTGATCTTGCCTTCCACTG 57.224 50.000 0.00 0.00 0.00 3.66
202 203 1.280133 TCTGATCTTGCCTTCCACTGG 59.720 52.381 0.00 0.00 0.00 4.00
203 204 0.329261 TGATCTTGCCTTCCACTGGG 59.671 55.000 0.00 0.00 0.00 4.45
204 205 0.394899 GATCTTGCCTTCCACTGGGG 60.395 60.000 0.00 0.00 38.37 4.96
205 206 1.142688 ATCTTGCCTTCCACTGGGGT 61.143 55.000 0.00 0.00 38.11 4.95
206 207 1.303643 CTTGCCTTCCACTGGGGTC 60.304 63.158 0.00 0.00 38.11 4.46
207 208 1.774217 TTGCCTTCCACTGGGGTCT 60.774 57.895 0.00 0.00 38.11 3.85
208 209 2.067932 TTGCCTTCCACTGGGGTCTG 62.068 60.000 0.00 0.00 38.11 3.51
209 210 2.224159 GCCTTCCACTGGGGTCTGA 61.224 63.158 0.00 0.00 38.11 3.27
210 211 1.566298 GCCTTCCACTGGGGTCTGAT 61.566 60.000 0.00 0.00 38.11 2.90
211 212 0.254178 CCTTCCACTGGGGTCTGATG 59.746 60.000 0.00 0.00 38.11 3.07
362 369 1.177256 AGTACAACCGTGCCTCTCGT 61.177 55.000 0.00 0.00 0.00 4.18
440 462 3.347168 GGCACGGCCGTTACTTTT 58.653 55.556 32.11 0.83 39.62 2.27
657 705 2.344203 CGAAGGGAGCGTCCAGAGT 61.344 63.158 6.41 0.00 38.64 3.24
669 717 2.027605 CAGAGTGCGACACGTGGT 59.972 61.111 21.57 5.35 39.64 4.16
688 736 2.578163 TAAATGGCTGAGAGCGCGCT 62.578 55.000 37.28 37.28 43.62 5.92
715 763 1.220206 CTGATCGTTGCCAGGCTCT 59.780 57.895 14.15 0.00 0.00 4.09
748 796 4.143094 GCTCGTTAACTAGTTGCTTCCAAG 60.143 45.833 18.56 7.40 0.00 3.61
749 797 5.204409 TCGTTAACTAGTTGCTTCCAAGA 57.796 39.130 18.56 3.82 0.00 3.02
750 798 5.603596 TCGTTAACTAGTTGCTTCCAAGAA 58.396 37.500 18.56 0.00 0.00 2.52
751 799 5.464389 TCGTTAACTAGTTGCTTCCAAGAAC 59.536 40.000 18.56 9.72 0.00 3.01
752 800 5.235616 CGTTAACTAGTTGCTTCCAAGAACA 59.764 40.000 18.56 0.00 0.00 3.18
753 801 6.564125 CGTTAACTAGTTGCTTCCAAGAACAG 60.564 42.308 18.56 4.55 0.00 3.16
754 802 4.423625 ACTAGTTGCTTCCAAGAACAGT 57.576 40.909 0.00 0.00 0.00 3.55
755 803 4.781934 ACTAGTTGCTTCCAAGAACAGTT 58.218 39.130 0.00 0.00 0.00 3.16
756 804 4.816925 ACTAGTTGCTTCCAAGAACAGTTC 59.183 41.667 5.00 5.00 0.00 3.01
757 805 3.891049 AGTTGCTTCCAAGAACAGTTCT 58.109 40.909 10.27 10.27 43.15 3.01
758 806 3.629398 AGTTGCTTCCAAGAACAGTTCTG 59.371 43.478 16.85 10.46 40.59 3.02
759 807 3.281727 TGCTTCCAAGAACAGTTCTGT 57.718 42.857 16.85 4.58 40.59 3.41
760 808 2.945008 TGCTTCCAAGAACAGTTCTGTG 59.055 45.455 16.85 15.14 40.59 3.66
761 809 2.287248 GCTTCCAAGAACAGTTCTGTGC 60.287 50.000 16.85 12.12 40.59 4.57
762 810 3.209410 CTTCCAAGAACAGTTCTGTGCT 58.791 45.455 16.85 7.57 40.59 4.40
763 811 2.838736 TCCAAGAACAGTTCTGTGCTC 58.161 47.619 16.85 5.43 40.59 4.26
764 812 1.876156 CCAAGAACAGTTCTGTGCTCC 59.124 52.381 16.85 1.60 40.59 4.70
765 813 2.486191 CCAAGAACAGTTCTGTGCTCCT 60.486 50.000 16.85 0.00 40.59 3.69
766 814 3.209410 CAAGAACAGTTCTGTGCTCCTT 58.791 45.455 16.85 8.45 40.59 3.36
767 815 2.843701 AGAACAGTTCTGTGCTCCTTG 58.156 47.619 15.41 0.00 38.91 3.61
768 816 2.171448 AGAACAGTTCTGTGCTCCTTGT 59.829 45.455 15.41 0.00 38.91 3.16
769 817 3.388024 AGAACAGTTCTGTGCTCCTTGTA 59.612 43.478 15.41 0.00 38.91 2.41
770 818 3.838244 ACAGTTCTGTGCTCCTTGTAA 57.162 42.857 4.58 0.00 0.00 2.41
771 819 4.150897 ACAGTTCTGTGCTCCTTGTAAA 57.849 40.909 4.58 0.00 0.00 2.01
772 820 4.523083 ACAGTTCTGTGCTCCTTGTAAAA 58.477 39.130 4.58 0.00 0.00 1.52
773 821 4.947388 ACAGTTCTGTGCTCCTTGTAAAAA 59.053 37.500 4.58 0.00 0.00 1.94
807 855 2.934570 AAGGGTTTCGCCGCGAGTA 61.935 57.895 16.14 5.58 37.14 2.59
956 1007 2.593346 ACAATCGCTGTCATCTCCTC 57.407 50.000 0.00 0.00 29.87 3.71
957 1008 2.106566 ACAATCGCTGTCATCTCCTCT 58.893 47.619 0.00 0.00 29.87 3.69
958 1009 2.100584 ACAATCGCTGTCATCTCCTCTC 59.899 50.000 0.00 0.00 29.87 3.20
959 1010 2.064434 ATCGCTGTCATCTCCTCTCA 57.936 50.000 0.00 0.00 0.00 3.27
960 1011 1.098869 TCGCTGTCATCTCCTCTCAC 58.901 55.000 0.00 0.00 0.00 3.51
961 1012 0.102120 CGCTGTCATCTCCTCTCACC 59.898 60.000 0.00 0.00 0.00 4.02
962 1013 0.102120 GCTGTCATCTCCTCTCACCG 59.898 60.000 0.00 0.00 0.00 4.94
963 1014 1.756430 CTGTCATCTCCTCTCACCGA 58.244 55.000 0.00 0.00 0.00 4.69
964 1015 2.305928 CTGTCATCTCCTCTCACCGAT 58.694 52.381 0.00 0.00 0.00 4.18
965 1016 2.293122 CTGTCATCTCCTCTCACCGATC 59.707 54.545 0.00 0.00 0.00 3.69
966 1017 1.265635 GTCATCTCCTCTCACCGATCG 59.734 57.143 8.51 8.51 0.00 3.69
967 1018 0.039617 CATCTCCTCTCACCGATCGC 60.040 60.000 10.32 0.00 0.00 4.58
968 1019 1.175983 ATCTCCTCTCACCGATCGCC 61.176 60.000 10.32 0.00 0.00 5.54
969 1020 2.044352 TCCTCTCACCGATCGCCA 60.044 61.111 10.32 0.00 0.00 5.69
970 1021 1.667154 CTCCTCTCACCGATCGCCAA 61.667 60.000 10.32 0.00 0.00 4.52
971 1022 1.519455 CCTCTCACCGATCGCCAAC 60.519 63.158 10.32 0.00 0.00 3.77
972 1023 1.513158 CTCTCACCGATCGCCAACT 59.487 57.895 10.32 0.00 0.00 3.16
973 1024 0.803768 CTCTCACCGATCGCCAACTG 60.804 60.000 10.32 0.00 0.00 3.16
974 1025 1.811266 CTCACCGATCGCCAACTGG 60.811 63.158 10.32 0.00 38.53 4.00
975 1026 2.225791 CTCACCGATCGCCAACTGGA 62.226 60.000 10.32 0.00 37.39 3.86
976 1027 1.153369 CACCGATCGCCAACTGGAT 60.153 57.895 10.32 0.00 37.39 3.41
977 1028 1.144057 ACCGATCGCCAACTGGATC 59.856 57.895 10.32 0.00 37.39 3.36
979 1030 4.835927 GATCGCCAACTGGATCGT 57.164 55.556 0.00 0.00 37.39 3.73
980 1031 2.594541 GATCGCCAACTGGATCGTC 58.405 57.895 0.00 0.00 37.39 4.20
981 1032 0.876342 GATCGCCAACTGGATCGTCC 60.876 60.000 0.00 0.00 37.39 4.79
982 1033 2.629050 ATCGCCAACTGGATCGTCCG 62.629 60.000 0.00 0.00 40.17 4.79
988 1039 3.770040 CTGGATCGTCCGGCACCA 61.770 66.667 0.00 0.47 40.17 4.17
989 1040 3.080765 TGGATCGTCCGGCACCAT 61.081 61.111 0.00 0.00 40.17 3.55
990 1041 2.189521 GGATCGTCCGGCACCATT 59.810 61.111 0.00 0.00 0.00 3.16
1008 1059 0.181114 TTCAGCAAGCCAGTGAGTGT 59.819 50.000 0.00 0.00 0.00 3.55
1009 1060 0.250038 TCAGCAAGCCAGTGAGTGTC 60.250 55.000 0.00 0.00 0.00 3.67
1010 1061 1.072159 AGCAAGCCAGTGAGTGTCC 59.928 57.895 0.00 0.00 0.00 4.02
1011 1062 1.227943 GCAAGCCAGTGAGTGTCCA 60.228 57.895 0.00 0.00 0.00 4.02
1012 1063 1.510480 GCAAGCCAGTGAGTGTCCAC 61.510 60.000 0.00 0.00 37.32 4.02
1047 1098 0.784778 CTTCGGTTCGTTGAGCTCAC 59.215 55.000 18.03 10.90 0.00 3.51
1066 1117 2.413112 CACGGATTCACTAGCTTGTGTG 59.587 50.000 24.36 15.71 38.90 3.82
1079 1130 1.605232 CTTGTGTGCTCTGCATTGTCA 59.395 47.619 0.00 0.00 41.91 3.58
1103 1154 1.519408 TGCGGTACTTTCTCTTTGCC 58.481 50.000 0.00 0.00 0.00 4.52
1140 1192 3.772387 TGGGCAATTTGTCCTTACATCA 58.228 40.909 20.18 0.00 44.07 3.07
1345 6112 1.922570 CCGACCAGGAGTATGTTTCG 58.077 55.000 0.00 0.00 45.00 3.46
1517 6293 3.808984 GGATGGGGTCAGTTCATCC 57.191 57.895 5.92 5.92 46.59 3.51
1539 6315 4.706962 CCAGGGAACTATTTTGGAGAAAGG 59.293 45.833 0.00 0.00 40.21 3.11
1688 6479 3.935203 AGATGTGTCATTCATCGTTGACC 59.065 43.478 0.00 0.00 44.20 4.02
1762 10106 0.251354 GAGCAGAGCCCATGTCTGAA 59.749 55.000 14.28 0.00 43.65 3.02
1905 10249 3.677527 CCAGAACCTGCTTGCTGG 58.322 61.111 15.42 15.42 41.62 4.85
1919 10263 3.148084 CTGGGGCCGATCGGTATT 58.852 61.111 33.33 0.00 37.65 1.89
2063 10407 3.644966 TTGACTTCTTTGTGGTGGAGT 57.355 42.857 0.00 0.00 0.00 3.85
2276 10731 1.143183 CAAGCGTACTGGGGCGTAT 59.857 57.895 0.00 0.00 0.00 3.06
2278 10733 0.461339 AAGCGTACTGGGGCGTATTG 60.461 55.000 0.00 0.00 0.00 1.90
2282 10737 2.546373 GCGTACTGGGGCGTATTGAATA 60.546 50.000 0.00 0.00 0.00 1.75
2294 10749 6.373779 GGCGTATTGAATATGTTTCATGAGG 58.626 40.000 6.31 0.00 0.00 3.86
2442 10904 2.682155 TGTGTTTGTTCTTTTGGCCC 57.318 45.000 0.00 0.00 0.00 5.80
2470 10972 7.646548 AATGCATAACTATCTATAGCTCCGA 57.353 36.000 0.00 0.00 33.68 4.55
2502 11004 4.961438 ACTTCCTTTGTCATGGCAAAAT 57.039 36.364 24.55 7.05 37.82 1.82
2505 11007 7.008021 ACTTCCTTTGTCATGGCAAAATAAT 57.992 32.000 24.55 8.35 37.82 1.28
2532 11034 5.559148 AGAGTATAGCCTTTGCATAGCTT 57.441 39.130 10.46 0.00 41.13 3.74
2534 11036 6.459923 AGAGTATAGCCTTTGCATAGCTTAC 58.540 40.000 10.46 11.63 41.13 2.34
2544 11046 6.749118 CCTTTGCATAGCTTACTGTGAAATTC 59.251 38.462 0.00 0.00 37.20 2.17
2606 11108 2.116827 ACCTGAAAACGTGGTTGTGA 57.883 45.000 0.00 0.00 0.00 3.58
2657 11159 7.359262 TCTAATTAATTGACCTGTGTGTTCG 57.641 36.000 11.05 0.00 0.00 3.95
2660 11162 3.469008 AATTGACCTGTGTGTTCGAGA 57.531 42.857 0.00 0.00 0.00 4.04
2677 11179 5.992198 TCGAGAGAAGAAAAGGAGGCCCT 62.992 52.174 0.00 0.00 40.71 5.19
2680 11182 2.841266 GAGAAGAAAAGGAGGCCCTACT 59.159 50.000 0.00 0.00 43.48 2.57
2681 11183 4.031611 GAGAAGAAAAGGAGGCCCTACTA 58.968 47.826 0.00 0.00 43.48 1.82
2687 11189 0.042281 AGGAGGCCCTACTAACGGTT 59.958 55.000 0.00 0.00 42.15 4.44
2703 11205 7.272978 ACTAACGGTTCAGTATCTTTGCATAT 58.727 34.615 0.00 0.00 0.00 1.78
2705 11207 7.478520 AACGGTTCAGTATCTTTGCATATAC 57.521 36.000 0.00 0.00 0.00 1.47
2706 11208 6.817184 ACGGTTCAGTATCTTTGCATATACT 58.183 36.000 9.80 9.80 39.04 2.12
2707 11209 6.924060 ACGGTTCAGTATCTTTGCATATACTC 59.076 38.462 11.80 4.50 36.91 2.59
2709 11211 7.445945 GGTTCAGTATCTTTGCATATACTCCT 58.554 38.462 11.80 0.00 36.91 3.69
2710 11212 8.585881 GGTTCAGTATCTTTGCATATACTCCTA 58.414 37.037 11.80 2.32 36.91 2.94
2712 11214 8.941995 TCAGTATCTTTGCATATACTCCTACT 57.058 34.615 11.80 0.00 36.91 2.57
2715 11217 9.809395 AGTATCTTTGCATATACTCCTACTACA 57.191 33.333 9.80 0.00 34.55 2.74
2741 11243 9.692325 AATTCATTAGAGAAAGGCTAGAAATGT 57.308 29.630 0.00 0.00 0.00 2.71
2761 11263 1.203523 TGCAGCTTGTTTTCCGTTTGT 59.796 42.857 0.00 0.00 0.00 2.83
2763 11265 2.192624 CAGCTTGTTTTCCGTTTGTGG 58.807 47.619 0.00 0.00 0.00 4.17
2797 11299 2.353704 CCATGTCGTGTCCTGAAGCTTA 60.354 50.000 0.00 0.00 0.00 3.09
2803 11305 6.170506 TGTCGTGTCCTGAAGCTTATAAAAT 58.829 36.000 0.00 0.00 0.00 1.82
2804 11306 6.092122 TGTCGTGTCCTGAAGCTTATAAAATG 59.908 38.462 0.00 0.00 0.00 2.32
2805 11307 6.092259 GTCGTGTCCTGAAGCTTATAAAATGT 59.908 38.462 0.00 0.00 0.00 2.71
2807 11309 6.961554 CGTGTCCTGAAGCTTATAAAATGTTC 59.038 38.462 0.00 0.00 0.00 3.18
2808 11310 7.360861 CGTGTCCTGAAGCTTATAAAATGTTCA 60.361 37.037 0.00 0.00 0.00 3.18
2809 11311 7.750903 GTGTCCTGAAGCTTATAAAATGTTCAC 59.249 37.037 0.00 0.00 0.00 3.18
2813 11315 8.306761 CCTGAAGCTTATAAAATGTTCACCTTT 58.693 33.333 0.00 0.00 0.00 3.11
2814 11316 9.696917 CTGAAGCTTATAAAATGTTCACCTTTT 57.303 29.630 0.00 0.00 0.00 2.27
2815 11317 9.474920 TGAAGCTTATAAAATGTTCACCTTTTG 57.525 29.630 0.00 0.00 0.00 2.44
2818 11320 8.150296 AGCTTATAAAATGTTCACCTTTTGCTT 58.850 29.630 3.89 0.00 0.00 3.91
2830 11332 8.971321 GTTCACCTTTTGCTTATATAATGCATG 58.029 33.333 15.66 12.12 36.55 4.06
2847 11349 3.078097 GCATGACTATCTAGAGCTCCGA 58.922 50.000 10.93 8.00 0.00 4.55
2871 11373 0.033228 CGCCTTTGTCATGGCCAAAA 59.967 50.000 10.96 4.58 45.90 2.44
2898 11400 2.287009 GGATTGTAGCGTTTGCATAGCC 60.287 50.000 5.16 0.00 46.23 3.93
2899 11401 1.091537 TTGTAGCGTTTGCATAGCCC 58.908 50.000 5.16 0.00 46.23 5.19
2903 11405 2.699768 GCGTTTGCATAGCCCAGCA 61.700 57.895 0.00 0.00 42.15 4.41
2905 11407 1.308047 CGTTTGCATAGCCCAGCATA 58.692 50.000 0.00 0.00 40.94 3.14
2915 11417 5.526115 CATAGCCCAGCATAAAATTCTGTG 58.474 41.667 0.00 0.00 0.00 3.66
2916 11418 2.762327 AGCCCAGCATAAAATTCTGTGG 59.238 45.455 0.00 0.00 0.00 4.17
2917 11419 2.760092 GCCCAGCATAAAATTCTGTGGA 59.240 45.455 0.00 0.00 0.00 4.02
2918 11420 3.385755 GCCCAGCATAAAATTCTGTGGAT 59.614 43.478 0.00 0.00 0.00 3.41
2919 11421 4.584325 GCCCAGCATAAAATTCTGTGGATA 59.416 41.667 0.00 0.00 0.00 2.59
2920 11422 5.068987 GCCCAGCATAAAATTCTGTGGATAA 59.931 40.000 0.00 0.00 0.00 1.75
2921 11423 6.239402 GCCCAGCATAAAATTCTGTGGATAAT 60.239 38.462 0.00 0.00 0.00 1.28
2922 11424 7.687592 GCCCAGCATAAAATTCTGTGGATAATT 60.688 37.037 0.00 0.00 0.00 1.40
2923 11425 8.206189 CCCAGCATAAAATTCTGTGGATAATTT 58.794 33.333 0.00 0.00 36.98 1.82
2924 11426 9.037737 CCAGCATAAAATTCTGTGGATAATTTG 57.962 33.333 0.00 0.00 35.89 2.32
2925 11427 9.590451 CAGCATAAAATTCTGTGGATAATTTGT 57.410 29.630 0.00 0.00 35.89 2.83
2932 11434 8.483307 AATTCTGTGGATAATTTGTTTGATGC 57.517 30.769 0.00 0.00 0.00 3.91
2933 11435 5.964758 TCTGTGGATAATTTGTTTGATGCC 58.035 37.500 0.00 0.00 0.00 4.40
2934 11436 5.479724 TCTGTGGATAATTTGTTTGATGCCA 59.520 36.000 0.00 0.00 0.00 4.92
2935 11437 6.014755 TCTGTGGATAATTTGTTTGATGCCAA 60.015 34.615 0.00 0.00 0.00 4.52
2936 11438 5.931146 TGTGGATAATTTGTTTGATGCCAAC 59.069 36.000 0.00 0.00 30.88 3.77
2937 11439 5.931146 GTGGATAATTTGTTTGATGCCAACA 59.069 36.000 0.00 0.00 30.88 3.33
2938 11440 6.594937 GTGGATAATTTGTTTGATGCCAACAT 59.405 34.615 0.00 0.00 39.98 2.71
2939 11441 7.119553 GTGGATAATTTGTTTGATGCCAACATT 59.880 33.333 0.00 0.00 36.35 2.71
2940 11442 7.664731 TGGATAATTTGTTTGATGCCAACATTT 59.335 29.630 0.00 0.00 36.35 2.32
2941 11443 7.964011 GGATAATTTGTTTGATGCCAACATTTG 59.036 33.333 0.00 0.00 36.35 2.32
2975 11477 1.336131 TGGCAAGCCAACAATTAGCA 58.664 45.000 12.11 0.00 44.12 3.49
2976 11478 1.690893 TGGCAAGCCAACAATTAGCAA 59.309 42.857 12.11 0.00 44.12 3.91
2977 11479 2.302445 TGGCAAGCCAACAATTAGCAAT 59.698 40.909 12.11 0.00 44.12 3.56
2978 11480 3.513119 TGGCAAGCCAACAATTAGCAATA 59.487 39.130 12.11 0.00 44.12 1.90
2979 11481 4.161942 TGGCAAGCCAACAATTAGCAATAT 59.838 37.500 12.11 0.00 44.12 1.28
2980 11482 4.746611 GGCAAGCCAACAATTAGCAATATC 59.253 41.667 6.14 0.00 35.81 1.63
2981 11483 4.442073 GCAAGCCAACAATTAGCAATATCG 59.558 41.667 0.00 0.00 0.00 2.92
2982 11484 5.733091 GCAAGCCAACAATTAGCAATATCGA 60.733 40.000 0.00 0.00 0.00 3.59
2983 11485 6.264832 CAAGCCAACAATTAGCAATATCGAA 58.735 36.000 0.00 0.00 0.00 3.71
2984 11486 6.449635 AGCCAACAATTAGCAATATCGAAA 57.550 33.333 0.00 0.00 0.00 3.46
2985 11487 6.498304 AGCCAACAATTAGCAATATCGAAAG 58.502 36.000 0.00 0.00 0.00 2.62
2986 11488 6.095440 AGCCAACAATTAGCAATATCGAAAGT 59.905 34.615 0.00 0.00 0.00 2.66
2987 11489 6.751888 GCCAACAATTAGCAATATCGAAAGTT 59.248 34.615 0.00 0.00 0.00 2.66
2988 11490 7.044052 GCCAACAATTAGCAATATCGAAAGTTC 60.044 37.037 0.00 0.00 0.00 3.01
2989 11491 7.432252 CCAACAATTAGCAATATCGAAAGTTCC 59.568 37.037 0.00 0.00 0.00 3.62
2990 11492 7.027778 ACAATTAGCAATATCGAAAGTTCCC 57.972 36.000 0.00 0.00 0.00 3.97
2991 11493 6.601613 ACAATTAGCAATATCGAAAGTTCCCA 59.398 34.615 0.00 0.00 0.00 4.37
2992 11494 7.122055 ACAATTAGCAATATCGAAAGTTCCCAA 59.878 33.333 0.00 0.00 0.00 4.12
2993 11495 7.639113 ATTAGCAATATCGAAAGTTCCCAAA 57.361 32.000 0.00 0.00 0.00 3.28
2994 11496 5.975693 AGCAATATCGAAAGTTCCCAAAA 57.024 34.783 0.00 0.00 0.00 2.44
2995 11497 6.339587 AGCAATATCGAAAGTTCCCAAAAA 57.660 33.333 0.00 0.00 0.00 1.94
3019 11521 1.456923 GCAACTTCTTGCGAAATTGGC 59.543 47.619 0.00 0.00 43.42 4.52
3020 11522 2.741612 CAACTTCTTGCGAAATTGGCA 58.258 42.857 0.00 0.00 33.87 4.92
3028 11530 3.717400 TGCGAAATTGGCAAGTAAACA 57.283 38.095 5.96 0.00 37.49 2.83
3029 11531 4.250116 TGCGAAATTGGCAAGTAAACAT 57.750 36.364 5.96 0.00 37.49 2.71
3030 11532 3.986572 TGCGAAATTGGCAAGTAAACATG 59.013 39.130 5.96 0.00 37.49 3.21
3031 11533 4.233789 GCGAAATTGGCAAGTAAACATGA 58.766 39.130 5.96 0.00 0.00 3.07
3032 11534 4.864247 GCGAAATTGGCAAGTAAACATGAT 59.136 37.500 5.96 0.00 0.00 2.45
3033 11535 6.033341 GCGAAATTGGCAAGTAAACATGATA 58.967 36.000 5.96 0.00 0.00 2.15
3034 11536 6.529829 GCGAAATTGGCAAGTAAACATGATAA 59.470 34.615 5.96 0.00 0.00 1.75
3035 11537 7.462724 GCGAAATTGGCAAGTAAACATGATAAC 60.463 37.037 5.96 0.00 0.00 1.89
3036 11538 7.754924 CGAAATTGGCAAGTAAACATGATAACT 59.245 33.333 5.96 0.00 0.00 2.24
3039 11541 9.855021 AATTGGCAAGTAAACATGATAACTAAC 57.145 29.630 5.96 0.00 0.00 2.34
3040 11542 7.385778 TGGCAAGTAAACATGATAACTAACC 57.614 36.000 0.00 5.28 0.00 2.85
3041 11543 6.943146 TGGCAAGTAAACATGATAACTAACCA 59.057 34.615 0.00 7.61 0.00 3.67
3042 11544 7.448777 TGGCAAGTAAACATGATAACTAACCAA 59.551 33.333 0.00 0.00 29.18 3.67
3043 11545 7.968405 GGCAAGTAAACATGATAACTAACCAAG 59.032 37.037 0.00 0.00 0.00 3.61
3044 11546 7.484959 GCAAGTAAACATGATAACTAACCAAGC 59.515 37.037 0.00 0.00 0.00 4.01
3045 11547 8.730680 CAAGTAAACATGATAACTAACCAAGCT 58.269 33.333 0.00 0.00 0.00 3.74
3046 11548 8.494016 AGTAAACATGATAACTAACCAAGCTC 57.506 34.615 0.00 0.00 0.00 4.09
3047 11549 8.100791 AGTAAACATGATAACTAACCAAGCTCA 58.899 33.333 0.00 0.00 0.00 4.26
3048 11550 7.759489 AAACATGATAACTAACCAAGCTCAA 57.241 32.000 0.00 0.00 0.00 3.02
3049 11551 6.992063 ACATGATAACTAACCAAGCTCAAG 57.008 37.500 0.00 0.00 0.00 3.02
3050 11552 5.355350 ACATGATAACTAACCAAGCTCAAGC 59.645 40.000 0.00 0.00 42.49 4.01
3061 11563 3.727419 GCTCAAGCGAAATTGCCAT 57.273 47.368 0.00 0.00 34.65 4.40
3062 11564 1.553308 GCTCAAGCGAAATTGCCATC 58.447 50.000 0.00 0.00 34.65 3.51
3063 11565 1.800286 GCTCAAGCGAAATTGCCATCC 60.800 52.381 0.00 0.00 34.65 3.51
3064 11566 1.747355 CTCAAGCGAAATTGCCATCCT 59.253 47.619 0.00 0.00 34.65 3.24
3065 11567 2.945008 CTCAAGCGAAATTGCCATCCTA 59.055 45.455 0.00 0.00 34.65 2.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 6.578023 GCAAACCTGCCCAATATAACATAAA 58.422 36.000 0.00 0.00 43.26 1.40
5 6 6.155475 GCAAACCTGCCCAATATAACATAA 57.845 37.500 0.00 0.00 43.26 1.90
6 7 5.782893 GCAAACCTGCCCAATATAACATA 57.217 39.130 0.00 0.00 43.26 2.29
20 21 8.950210 TCTTATCATCTTCTTTAAGCAAACCTG 58.050 33.333 0.00 0.00 32.36 4.00
21 22 9.692325 ATCTTATCATCTTCTTTAAGCAAACCT 57.308 29.630 0.00 0.00 32.36 3.50
22 23 9.727627 CATCTTATCATCTTCTTTAAGCAAACC 57.272 33.333 0.00 0.00 32.36 3.27
26 27 9.896645 ACTTCATCTTATCATCTTCTTTAAGCA 57.103 29.630 0.00 0.00 32.36 3.91
31 32 9.393512 CTGGAACTTCATCTTATCATCTTCTTT 57.606 33.333 0.00 0.00 0.00 2.52
32 33 8.766476 TCTGGAACTTCATCTTATCATCTTCTT 58.234 33.333 0.00 0.00 0.00 2.52
33 34 8.203485 GTCTGGAACTTCATCTTATCATCTTCT 58.797 37.037 0.00 0.00 0.00 2.85
34 35 8.203485 AGTCTGGAACTTCATCTTATCATCTTC 58.797 37.037 0.00 0.00 33.03 2.87
35 36 7.986320 CAGTCTGGAACTTCATCTTATCATCTT 59.014 37.037 0.00 0.00 35.45 2.40
36 37 7.418827 CCAGTCTGGAACTTCATCTTATCATCT 60.419 40.741 14.26 0.00 40.96 2.90
37 38 6.705381 CCAGTCTGGAACTTCATCTTATCATC 59.295 42.308 14.26 0.00 40.96 2.92
38 39 6.157645 ACCAGTCTGGAACTTCATCTTATCAT 59.842 38.462 26.18 0.00 40.96 2.45
39 40 5.485353 ACCAGTCTGGAACTTCATCTTATCA 59.515 40.000 26.18 0.00 40.96 2.15
40 41 5.814705 CACCAGTCTGGAACTTCATCTTATC 59.185 44.000 26.18 0.00 40.96 1.75
41 42 5.249393 ACACCAGTCTGGAACTTCATCTTAT 59.751 40.000 26.18 0.00 40.96 1.73
42 43 4.593206 ACACCAGTCTGGAACTTCATCTTA 59.407 41.667 26.18 0.00 40.96 2.10
43 44 3.392616 ACACCAGTCTGGAACTTCATCTT 59.607 43.478 26.18 0.00 40.96 2.40
44 45 2.975489 ACACCAGTCTGGAACTTCATCT 59.025 45.455 26.18 0.00 40.96 2.90
45 46 3.070018 CACACCAGTCTGGAACTTCATC 58.930 50.000 26.18 0.00 40.96 2.92
46 47 2.705658 TCACACCAGTCTGGAACTTCAT 59.294 45.455 26.18 0.00 40.96 2.57
47 48 2.115427 TCACACCAGTCTGGAACTTCA 58.885 47.619 26.18 1.15 40.96 3.02
48 49 2.910688 TCACACCAGTCTGGAACTTC 57.089 50.000 26.18 0.00 40.96 3.01
49 50 2.771943 TCTTCACACCAGTCTGGAACTT 59.228 45.455 26.18 0.00 40.96 2.66
50 51 2.366916 CTCTTCACACCAGTCTGGAACT 59.633 50.000 26.18 0.00 40.96 3.01
51 52 2.365617 TCTCTTCACACCAGTCTGGAAC 59.634 50.000 26.18 0.00 40.96 3.62
52 53 2.677914 TCTCTTCACACCAGTCTGGAA 58.322 47.619 26.18 8.17 40.96 3.53
53 54 2.381752 TCTCTTCACACCAGTCTGGA 57.618 50.000 26.18 0.00 40.96 3.86
54 55 3.332919 CAATCTCTTCACACCAGTCTGG 58.667 50.000 17.88 17.88 45.02 3.86
55 56 3.332919 CCAATCTCTTCACACCAGTCTG 58.667 50.000 0.00 0.00 0.00 3.51
56 57 2.289945 GCCAATCTCTTCACACCAGTCT 60.290 50.000 0.00 0.00 0.00 3.24
57 58 2.079925 GCCAATCTCTTCACACCAGTC 58.920 52.381 0.00 0.00 0.00 3.51
58 59 1.701847 AGCCAATCTCTTCACACCAGT 59.298 47.619 0.00 0.00 0.00 4.00
59 60 2.289882 TGAGCCAATCTCTTCACACCAG 60.290 50.000 0.00 0.00 42.38 4.00
60 61 1.699083 TGAGCCAATCTCTTCACACCA 59.301 47.619 0.00 0.00 42.38 4.17
61 62 2.479566 TGAGCCAATCTCTTCACACC 57.520 50.000 0.00 0.00 42.38 4.16
62 63 2.097142 GCATGAGCCAATCTCTTCACAC 59.903 50.000 0.00 0.00 42.38 3.82
63 64 2.362736 GCATGAGCCAATCTCTTCACA 58.637 47.619 0.00 0.00 42.38 3.58
64 65 1.329906 CGCATGAGCCAATCTCTTCAC 59.670 52.381 0.00 0.00 42.38 3.18
65 66 1.660167 CGCATGAGCCAATCTCTTCA 58.340 50.000 0.00 0.00 42.38 3.02
66 67 0.942962 CCGCATGAGCCAATCTCTTC 59.057 55.000 0.00 0.00 42.38 2.87
67 68 1.099879 GCCGCATGAGCCAATCTCTT 61.100 55.000 0.00 0.00 42.38 2.85
68 69 1.525535 GCCGCATGAGCCAATCTCT 60.526 57.895 0.00 0.00 42.38 3.10
69 70 1.525535 AGCCGCATGAGCCAATCTC 60.526 57.895 0.00 0.00 42.23 2.75
70 71 1.822613 CAGCCGCATGAGCCAATCT 60.823 57.895 0.00 0.00 37.52 2.40
71 72 2.719979 CAGCCGCATGAGCCAATC 59.280 61.111 0.00 0.00 37.52 2.67
72 73 3.524606 GCAGCCGCATGAGCCAAT 61.525 61.111 0.00 0.00 38.36 3.16
73 74 4.728110 AGCAGCCGCATGAGCCAA 62.728 61.111 0.00 0.00 42.27 4.52
85 86 2.126417 CTATCCGCCAATGCAGCAGC 62.126 60.000 0.00 0.00 42.57 5.25
86 87 0.533531 TCTATCCGCCAATGCAGCAG 60.534 55.000 0.00 0.00 37.32 4.24
87 88 0.109153 ATCTATCCGCCAATGCAGCA 59.891 50.000 0.00 0.00 37.32 4.41
88 89 0.801251 GATCTATCCGCCAATGCAGC 59.199 55.000 0.00 0.00 37.32 5.25
89 90 1.446907 GGATCTATCCGCCAATGCAG 58.553 55.000 0.00 0.00 37.19 4.41
90 91 3.631453 GGATCTATCCGCCAATGCA 57.369 52.632 0.00 0.00 37.19 3.96
99 100 3.376922 CCGCGGGGAAAGGATCTATCC 62.377 61.905 20.10 0.35 40.88 2.59
100 101 0.037232 CCGCGGGGAAAGGATCTATC 60.037 60.000 20.10 0.00 34.06 2.08
101 102 2.058675 CCGCGGGGAAAGGATCTAT 58.941 57.895 20.10 0.00 34.06 1.98
102 103 2.803817 GCCGCGGGGAAAGGATCTA 61.804 63.158 29.38 0.00 34.06 1.98
103 104 4.176752 GCCGCGGGGAAAGGATCT 62.177 66.667 29.38 0.00 34.06 2.75
104 105 4.483243 TGCCGCGGGGAAAGGATC 62.483 66.667 29.38 7.00 34.06 3.36
105 106 4.489771 CTGCCGCGGGGAAAGGAT 62.490 66.667 29.38 0.00 34.06 3.24
108 109 4.394712 AGTCTGCCGCGGGGAAAG 62.395 66.667 29.38 18.14 34.06 2.62
109 110 4.388499 GAGTCTGCCGCGGGGAAA 62.388 66.667 29.38 8.50 34.06 3.13
115 116 4.200283 GAGGAGGAGTCTGCCGCG 62.200 72.222 0.00 0.00 31.08 6.46
116 117 4.200283 CGAGGAGGAGTCTGCCGC 62.200 72.222 0.00 0.00 31.08 6.53
117 118 3.522731 CCGAGGAGGAGTCTGCCG 61.523 72.222 0.00 0.00 45.00 5.69
118 119 3.844090 GCCGAGGAGGAGTCTGCC 61.844 72.222 0.00 0.00 45.00 4.85
119 120 4.200283 CGCCGAGGAGGAGTCTGC 62.200 72.222 0.00 0.00 45.00 4.26
120 121 2.438614 TCGCCGAGGAGGAGTCTG 60.439 66.667 0.00 0.00 45.00 3.51
121 122 2.438795 GTCGCCGAGGAGGAGTCT 60.439 66.667 0.00 0.00 45.00 3.24
122 123 1.668101 ATTGTCGCCGAGGAGGAGTC 61.668 60.000 0.00 0.00 45.00 3.36
123 124 1.682684 ATTGTCGCCGAGGAGGAGT 60.683 57.895 0.00 0.00 45.00 3.85
124 125 1.227089 CATTGTCGCCGAGGAGGAG 60.227 63.158 0.00 0.00 45.00 3.69
125 126 1.043116 ATCATTGTCGCCGAGGAGGA 61.043 55.000 0.00 0.00 45.00 3.71
126 127 0.877649 CATCATTGTCGCCGAGGAGG 60.878 60.000 0.00 0.00 44.97 4.30
127 128 0.877649 CCATCATTGTCGCCGAGGAG 60.878 60.000 0.00 0.00 0.00 3.69
128 129 1.143838 CCATCATTGTCGCCGAGGA 59.856 57.895 0.00 0.00 0.00 3.71
129 130 1.889105 CCCATCATTGTCGCCGAGG 60.889 63.158 0.00 0.00 0.00 4.63
130 131 0.250038 ATCCCATCATTGTCGCCGAG 60.250 55.000 0.00 0.00 0.00 4.63
131 132 0.249868 GATCCCATCATTGTCGCCGA 60.250 55.000 0.00 0.00 0.00 5.54
132 133 1.230635 GGATCCCATCATTGTCGCCG 61.231 60.000 0.00 0.00 0.00 6.46
133 134 0.179020 TGGATCCCATCATTGTCGCC 60.179 55.000 9.90 0.00 0.00 5.54
134 135 1.202687 TCTGGATCCCATCATTGTCGC 60.203 52.381 9.90 0.00 30.82 5.19
135 136 2.916702 TCTGGATCCCATCATTGTCG 57.083 50.000 9.90 0.00 30.82 4.35
136 137 3.332919 CGATCTGGATCCCATCATTGTC 58.667 50.000 9.90 0.00 34.40 3.18
137 138 2.039480 CCGATCTGGATCCCATCATTGT 59.961 50.000 9.90 0.00 42.00 2.71
138 139 2.708051 CCGATCTGGATCCCATCATTG 58.292 52.381 9.90 0.00 42.00 2.82
139 140 1.004044 GCCGATCTGGATCCCATCATT 59.996 52.381 9.90 0.00 42.00 2.57
140 141 0.617413 GCCGATCTGGATCCCATCAT 59.383 55.000 9.90 0.00 42.00 2.45
141 142 0.472543 AGCCGATCTGGATCCCATCA 60.473 55.000 9.90 0.00 42.00 3.07
142 143 1.480137 CTAGCCGATCTGGATCCCATC 59.520 57.143 9.90 9.84 42.00 3.51
143 144 1.566211 CTAGCCGATCTGGATCCCAT 58.434 55.000 9.90 0.41 42.00 4.00
144 145 1.188219 GCTAGCCGATCTGGATCCCA 61.188 60.000 9.90 0.00 42.00 4.37
145 146 0.902516 AGCTAGCCGATCTGGATCCC 60.903 60.000 12.13 0.00 42.00 3.85
146 147 0.246086 CAGCTAGCCGATCTGGATCC 59.754 60.000 12.13 4.20 42.00 3.36
147 148 1.202114 CTCAGCTAGCCGATCTGGATC 59.798 57.143 12.13 0.83 42.00 3.36
148 149 1.255882 CTCAGCTAGCCGATCTGGAT 58.744 55.000 12.13 4.01 42.00 3.41
149 150 1.459455 GCTCAGCTAGCCGATCTGGA 61.459 60.000 12.13 0.00 46.25 3.86
150 151 1.006337 GCTCAGCTAGCCGATCTGG 60.006 63.158 12.13 0.00 46.25 3.86
151 152 4.651585 GCTCAGCTAGCCGATCTG 57.348 61.111 12.13 2.44 46.25 2.90
168 169 3.070018 AGATCAGAAAACACCAGCGAAG 58.930 45.455 0.00 0.00 0.00 3.79
169 170 3.126001 AGATCAGAAAACACCAGCGAA 57.874 42.857 0.00 0.00 0.00 4.70
170 171 2.807967 CAAGATCAGAAAACACCAGCGA 59.192 45.455 0.00 0.00 0.00 4.93
171 172 2.666619 GCAAGATCAGAAAACACCAGCG 60.667 50.000 0.00 0.00 0.00 5.18
172 173 2.352127 GGCAAGATCAGAAAACACCAGC 60.352 50.000 0.00 0.00 0.00 4.85
173 174 3.152341 AGGCAAGATCAGAAAACACCAG 58.848 45.455 0.00 0.00 0.00 4.00
174 175 3.228188 AGGCAAGATCAGAAAACACCA 57.772 42.857 0.00 0.00 0.00 4.17
175 176 3.057245 GGAAGGCAAGATCAGAAAACACC 60.057 47.826 0.00 0.00 0.00 4.16
176 177 3.569701 TGGAAGGCAAGATCAGAAAACAC 59.430 43.478 0.00 0.00 0.00 3.32
177 178 3.569701 GTGGAAGGCAAGATCAGAAAACA 59.430 43.478 0.00 0.00 0.00 2.83
178 179 3.823304 AGTGGAAGGCAAGATCAGAAAAC 59.177 43.478 0.00 0.00 0.00 2.43
179 180 3.822735 CAGTGGAAGGCAAGATCAGAAAA 59.177 43.478 0.00 0.00 0.00 2.29
180 181 3.415212 CAGTGGAAGGCAAGATCAGAAA 58.585 45.455 0.00 0.00 0.00 2.52
181 182 2.290514 CCAGTGGAAGGCAAGATCAGAA 60.291 50.000 1.68 0.00 0.00 3.02
182 183 1.280133 CCAGTGGAAGGCAAGATCAGA 59.720 52.381 1.68 0.00 0.00 3.27
183 184 1.681166 CCCAGTGGAAGGCAAGATCAG 60.681 57.143 11.95 0.00 0.00 2.90
184 185 0.329261 CCCAGTGGAAGGCAAGATCA 59.671 55.000 11.95 0.00 0.00 2.92
185 186 0.394899 CCCCAGTGGAAGGCAAGATC 60.395 60.000 11.95 0.00 35.39 2.75
186 187 1.142688 ACCCCAGTGGAAGGCAAGAT 61.143 55.000 11.95 0.00 38.00 2.40
187 188 1.774217 ACCCCAGTGGAAGGCAAGA 60.774 57.895 11.95 0.00 38.00 3.02
188 189 1.303643 GACCCCAGTGGAAGGCAAG 60.304 63.158 11.95 0.00 38.00 4.01
189 190 1.774217 AGACCCCAGTGGAAGGCAA 60.774 57.895 11.95 0.00 38.00 4.52
190 191 2.121963 AGACCCCAGTGGAAGGCA 60.122 61.111 11.95 0.00 38.00 4.75
191 192 1.566298 ATCAGACCCCAGTGGAAGGC 61.566 60.000 11.95 3.42 38.00 4.35
192 193 0.254178 CATCAGACCCCAGTGGAAGG 59.746 60.000 11.95 6.85 38.00 3.46
193 194 0.254178 CCATCAGACCCCAGTGGAAG 59.746 60.000 11.95 3.94 38.00 3.46
194 195 1.207488 CCCATCAGACCCCAGTGGAA 61.207 60.000 11.95 0.00 38.00 3.53
195 196 1.616327 CCCATCAGACCCCAGTGGA 60.616 63.158 11.95 0.00 38.00 4.02
196 197 3.001514 CCCATCAGACCCCAGTGG 58.998 66.667 0.63 0.63 41.37 4.00
197 198 2.273449 GCCCATCAGACCCCAGTG 59.727 66.667 0.00 0.00 0.00 3.66
198 199 3.017581 GGCCCATCAGACCCCAGT 61.018 66.667 0.00 0.00 0.00 4.00
199 200 4.181010 CGGCCCATCAGACCCCAG 62.181 72.222 0.00 0.00 0.00 4.45
201 202 4.489771 CACGGCCCATCAGACCCC 62.490 72.222 0.00 0.00 0.00 4.95
202 203 3.399181 TCACGGCCCATCAGACCC 61.399 66.667 0.00 0.00 0.00 4.46
203 204 2.125106 GTCACGGCCCATCAGACC 60.125 66.667 0.00 0.00 0.00 3.85
204 205 0.321653 AAAGTCACGGCCCATCAGAC 60.322 55.000 0.00 0.00 0.00 3.51
205 206 0.036388 GAAAGTCACGGCCCATCAGA 60.036 55.000 0.00 0.00 0.00 3.27
206 207 1.361668 CGAAAGTCACGGCCCATCAG 61.362 60.000 0.00 0.00 0.00 2.90
207 208 1.375396 CGAAAGTCACGGCCCATCA 60.375 57.895 0.00 0.00 0.00 3.07
208 209 2.750888 GCGAAAGTCACGGCCCATC 61.751 63.158 0.00 0.00 0.00 3.51
209 210 2.746277 GCGAAAGTCACGGCCCAT 60.746 61.111 0.00 0.00 0.00 4.00
345 352 1.287815 CACGAGAGGCACGGTTGTA 59.712 57.895 0.00 0.00 34.93 2.41
362 369 1.134220 AGAGTCACGGTTTTGCTTCCA 60.134 47.619 0.00 0.00 0.00 3.53
657 705 1.570347 GCCATTTACCACGTGTCGCA 61.570 55.000 15.65 0.00 0.00 5.10
669 717 2.173669 GCGCGCTCTCAGCCATTTA 61.174 57.895 26.67 0.00 38.18 1.40
688 736 1.358725 GCAACGATCAGCGCCACTTA 61.359 55.000 2.29 0.00 46.04 2.24
715 763 2.750948 AGTTAACGAGCGCTTCTTTGA 58.249 42.857 13.26 0.00 0.00 2.69
748 796 2.565841 ACAAGGAGCACAGAACTGTTC 58.434 47.619 12.54 12.54 42.83 3.18
749 797 2.717639 ACAAGGAGCACAGAACTGTT 57.282 45.000 4.63 0.00 42.83 3.16
750 798 3.838244 TTACAAGGAGCACAGAACTGT 57.162 42.857 1.32 1.32 46.17 3.55
751 799 5.499139 TTTTTACAAGGAGCACAGAACTG 57.501 39.130 0.00 0.00 0.00 3.16
771 819 3.131046 CCCTTGAGCACAGAACTGTTTTT 59.869 43.478 4.63 0.00 42.83 1.94
772 820 2.689983 CCCTTGAGCACAGAACTGTTTT 59.310 45.455 4.63 0.00 42.83 2.43
773 821 2.301346 CCCTTGAGCACAGAACTGTTT 58.699 47.619 4.63 0.00 42.83 2.83
774 822 1.212935 ACCCTTGAGCACAGAACTGTT 59.787 47.619 4.63 0.00 42.83 3.16
775 823 0.839946 ACCCTTGAGCACAGAACTGT 59.160 50.000 1.32 1.32 46.17 3.55
776 824 1.972872 AACCCTTGAGCACAGAACTG 58.027 50.000 0.00 0.00 0.00 3.16
777 825 2.576615 GAAACCCTTGAGCACAGAACT 58.423 47.619 0.00 0.00 0.00 3.01
778 826 1.264288 CGAAACCCTTGAGCACAGAAC 59.736 52.381 0.00 0.00 0.00 3.01
779 827 1.593196 CGAAACCCTTGAGCACAGAA 58.407 50.000 0.00 0.00 0.00 3.02
780 828 0.884704 GCGAAACCCTTGAGCACAGA 60.885 55.000 0.00 0.00 0.00 3.41
781 829 1.576421 GCGAAACCCTTGAGCACAG 59.424 57.895 0.00 0.00 0.00 3.66
782 830 1.896660 GGCGAAACCCTTGAGCACA 60.897 57.895 0.00 0.00 0.00 4.57
783 831 2.954611 GGCGAAACCCTTGAGCAC 59.045 61.111 0.00 0.00 0.00 4.40
947 998 1.598882 CGATCGGTGAGAGGAGATGA 58.401 55.000 7.38 0.00 0.00 2.92
955 1006 1.215382 CAGTTGGCGATCGGTGAGA 59.785 57.895 18.30 0.00 0.00 3.27
956 1007 1.811266 CCAGTTGGCGATCGGTGAG 60.811 63.158 18.30 0.00 0.00 3.51
957 1008 1.613317 ATCCAGTTGGCGATCGGTGA 61.613 55.000 18.30 0.00 34.44 4.02
958 1009 1.153369 ATCCAGTTGGCGATCGGTG 60.153 57.895 18.30 0.00 34.44 4.94
959 1010 1.144057 GATCCAGTTGGCGATCGGT 59.856 57.895 18.30 0.00 34.44 4.69
960 1011 4.033894 GATCCAGTTGGCGATCGG 57.966 61.111 18.30 0.00 34.44 4.18
962 1013 0.876342 GGACGATCCAGTTGGCGATC 60.876 60.000 5.40 0.00 36.28 3.69
963 1014 1.144057 GGACGATCCAGTTGGCGAT 59.856 57.895 5.40 0.00 36.28 4.58
964 1015 2.577059 GGACGATCCAGTTGGCGA 59.423 61.111 5.40 0.00 36.28 5.54
965 1016 2.885644 CGGACGATCCAGTTGGCG 60.886 66.667 0.00 0.00 35.91 5.69
966 1017 2.511600 CCGGACGATCCAGTTGGC 60.512 66.667 0.00 0.00 35.91 4.52
967 1018 2.511600 GCCGGACGATCCAGTTGG 60.512 66.667 5.05 0.00 35.91 3.77
968 1019 2.100631 GTGCCGGACGATCCAGTTG 61.101 63.158 5.05 0.00 35.91 3.16
969 1020 2.264794 GTGCCGGACGATCCAGTT 59.735 61.111 5.05 0.00 35.91 3.16
970 1021 3.771160 GGTGCCGGACGATCCAGT 61.771 66.667 5.05 0.00 35.91 4.00
971 1022 2.593468 AATGGTGCCGGACGATCCAG 62.593 60.000 5.05 0.00 35.91 3.86
972 1023 2.587322 GAATGGTGCCGGACGATCCA 62.587 60.000 5.05 5.76 35.91 3.41
973 1024 1.887707 GAATGGTGCCGGACGATCC 60.888 63.158 5.05 0.00 0.00 3.36
974 1025 1.153449 TGAATGGTGCCGGACGATC 60.153 57.895 5.05 0.00 0.00 3.69
975 1026 1.153369 CTGAATGGTGCCGGACGAT 60.153 57.895 5.05 0.07 0.00 3.73
976 1027 2.264480 CTGAATGGTGCCGGACGA 59.736 61.111 5.05 0.00 0.00 4.20
977 1028 3.499737 GCTGAATGGTGCCGGACG 61.500 66.667 5.05 0.00 0.00 4.79
978 1029 1.926511 CTTGCTGAATGGTGCCGGAC 61.927 60.000 5.05 0.00 0.00 4.79
979 1030 1.675310 CTTGCTGAATGGTGCCGGA 60.675 57.895 5.05 0.00 0.00 5.14
980 1031 2.879907 CTTGCTGAATGGTGCCGG 59.120 61.111 0.00 0.00 0.00 6.13
981 1032 2.180017 GCTTGCTGAATGGTGCCG 59.820 61.111 0.00 0.00 0.00 5.69
982 1033 2.221906 CTGGCTTGCTGAATGGTGCC 62.222 60.000 0.00 0.00 40.62 5.01
983 1034 1.214589 CTGGCTTGCTGAATGGTGC 59.785 57.895 0.00 0.00 0.00 5.01
984 1035 0.242825 CACTGGCTTGCTGAATGGTG 59.757 55.000 0.00 0.00 0.00 4.17
985 1036 0.111061 TCACTGGCTTGCTGAATGGT 59.889 50.000 0.00 0.00 0.00 3.55
986 1037 0.809385 CTCACTGGCTTGCTGAATGG 59.191 55.000 0.00 0.00 0.00 3.16
987 1038 1.199327 CACTCACTGGCTTGCTGAATG 59.801 52.381 0.00 0.00 0.00 2.67
988 1039 1.202855 ACACTCACTGGCTTGCTGAAT 60.203 47.619 0.00 0.00 0.00 2.57
989 1040 0.181114 ACACTCACTGGCTTGCTGAA 59.819 50.000 0.00 0.00 0.00 3.02
990 1041 0.250038 GACACTCACTGGCTTGCTGA 60.250 55.000 0.00 0.00 0.00 4.26
1008 1059 2.106566 GAAGAGCATGAGAGGAGTGGA 58.893 52.381 0.00 0.00 0.00 4.02
1009 1060 2.109774 AGAAGAGCATGAGAGGAGTGG 58.890 52.381 0.00 0.00 0.00 4.00
1010 1061 3.734597 CGAAGAAGAGCATGAGAGGAGTG 60.735 52.174 0.00 0.00 0.00 3.51
1011 1062 2.426738 CGAAGAAGAGCATGAGAGGAGT 59.573 50.000 0.00 0.00 0.00 3.85
1012 1063 2.223782 CCGAAGAAGAGCATGAGAGGAG 60.224 54.545 0.00 0.00 0.00 3.69
1013 1064 1.753649 CCGAAGAAGAGCATGAGAGGA 59.246 52.381 0.00 0.00 0.00 3.71
1020 1071 2.069273 CAACGAACCGAAGAAGAGCAT 58.931 47.619 0.00 0.00 0.00 3.79
1047 1098 1.394917 GCACACAAGCTAGTGAATCCG 59.605 52.381 15.58 0.00 42.05 4.18
1066 1117 2.091588 CGCAAAATTGACAATGCAGAGC 59.908 45.455 11.65 7.02 38.69 4.09
1079 1130 4.982295 GCAAAGAGAAAGTACCGCAAAATT 59.018 37.500 0.00 0.00 0.00 1.82
1103 1154 1.666888 GCCCAAAACAACATCGAGCAG 60.667 52.381 0.00 0.00 0.00 4.24
1168 1220 0.036952 CCACACTGATGTTCTCCGCT 60.037 55.000 0.00 0.00 36.72 5.52
1345 6112 2.836262 CTCATGTGCTCCAGGAAGATC 58.164 52.381 0.00 0.00 32.65 2.75
1517 6293 5.325239 ACCTTTCTCCAAAATAGTTCCCTG 58.675 41.667 0.00 0.00 0.00 4.45
1539 6315 3.939592 GACATGCCCCTCTGTTAAGTAAC 59.060 47.826 0.00 0.00 36.74 2.50
1735 6526 1.944177 TGGGCTCTGCTCTAAAGACT 58.056 50.000 0.00 0.00 0.00 3.24
1762 10106 2.579873 GTGATGGATGGCATTGTAGCT 58.420 47.619 0.00 0.00 34.17 3.32
1905 10249 0.600255 CAGTGAATACCGATCGGCCC 60.600 60.000 33.62 19.34 39.32 5.80
1919 10263 3.643320 ACAATCTTCAGTCTGTCCAGTGA 59.357 43.478 0.00 0.00 0.00 3.41
2010 10354 4.041567 TCTTCAACTCCTGGCAATTGTAGA 59.958 41.667 7.40 8.55 0.00 2.59
2276 10731 5.825532 TCCCACCTCATGAAACATATTCAA 58.174 37.500 0.00 0.00 31.55 2.69
2278 10733 4.276926 GCTCCCACCTCATGAAACATATTC 59.723 45.833 0.00 0.00 0.00 1.75
2282 10737 1.341383 GGCTCCCACCTCATGAAACAT 60.341 52.381 0.00 0.00 0.00 2.71
2294 10749 1.141657 TCAGCAATATCAGGCTCCCAC 59.858 52.381 0.00 0.00 38.56 4.61
2505 11007 7.015682 AGCTATGCAAAGGCTATACTCTAGAAA 59.984 37.037 9.19 0.00 41.91 2.52
2532 11034 5.304686 ACCAGGAACAGAATTTCACAGTA 57.695 39.130 0.00 0.00 0.00 2.74
2534 11036 4.580167 TGAACCAGGAACAGAATTTCACAG 59.420 41.667 0.00 0.00 0.00 3.66
2544 11046 3.407424 TCAGTGATGAACCAGGAACAG 57.593 47.619 0.00 0.00 0.00 3.16
2645 11147 2.307768 TCTTCTCTCGAACACACAGGT 58.692 47.619 0.00 0.00 0.00 4.00
2648 11150 4.119862 CCTTTTCTTCTCTCGAACACACA 58.880 43.478 0.00 0.00 0.00 3.72
2657 11159 1.912731 AGGGCCTCCTTTTCTTCTCTC 59.087 52.381 0.00 0.00 41.56 3.20
2660 11162 2.922564 AGTAGGGCCTCCTTTTCTTCT 58.077 47.619 10.74 0.00 41.56 2.85
2672 11174 0.900421 ACTGAACCGTTAGTAGGGCC 59.100 55.000 0.00 0.00 32.40 5.80
2677 11179 6.028146 TGCAAAGATACTGAACCGTTAGTA 57.972 37.500 0.00 0.00 34.23 1.82
2680 11182 8.418662 AGTATATGCAAAGATACTGAACCGTTA 58.581 33.333 14.96 0.00 37.46 3.18
2681 11183 7.272978 AGTATATGCAAAGATACTGAACCGTT 58.727 34.615 14.96 0.00 37.46 4.44
2687 11189 8.941995 AGTAGGAGTATATGCAAAGATACTGA 57.058 34.615 18.73 6.39 38.66 3.41
2705 11207 9.757227 CCTTTCTCTAATGAATTGTAGTAGGAG 57.243 37.037 0.00 0.00 0.00 3.69
2706 11208 8.204836 GCCTTTCTCTAATGAATTGTAGTAGGA 58.795 37.037 0.00 0.00 0.00 2.94
2707 11209 8.207545 AGCCTTTCTCTAATGAATTGTAGTAGG 58.792 37.037 0.00 0.00 0.00 3.18
2710 11212 8.982723 TCTAGCCTTTCTCTAATGAATTGTAGT 58.017 33.333 0.00 0.00 0.00 2.73
2713 11215 9.692325 ATTTCTAGCCTTTCTCTAATGAATTGT 57.308 29.630 0.00 0.00 0.00 2.71
2714 11216 9.947669 CATTTCTAGCCTTTCTCTAATGAATTG 57.052 33.333 0.00 0.00 0.00 2.32
2715 11217 9.692325 ACATTTCTAGCCTTTCTCTAATGAATT 57.308 29.630 0.00 0.00 0.00 2.17
2716 11218 9.118300 CACATTTCTAGCCTTTCTCTAATGAAT 57.882 33.333 0.00 0.00 0.00 2.57
2735 11237 2.472488 CGGAAAACAAGCTGCACATTTC 59.528 45.455 1.02 7.00 0.00 2.17
2741 11243 1.203523 ACAAACGGAAAACAAGCTGCA 59.796 42.857 1.02 0.00 0.00 4.41
2761 11263 2.102252 GACATGGCCAAAAGAACAACCA 59.898 45.455 10.96 0.00 0.00 3.67
2763 11265 2.223711 ACGACATGGCCAAAAGAACAAC 60.224 45.455 10.96 0.00 0.00 3.32
2803 11305 8.060931 TGCATTATATAAGCAAAAGGTGAACA 57.939 30.769 13.71 0.00 34.97 3.18
2804 11306 8.971321 CATGCATTATATAAGCAAAAGGTGAAC 58.029 33.333 17.65 0.00 42.15 3.18
2805 11307 8.911965 TCATGCATTATATAAGCAAAAGGTGAA 58.088 29.630 17.65 0.00 42.15 3.18
2807 11309 8.355169 AGTCATGCATTATATAAGCAAAAGGTG 58.645 33.333 17.65 13.06 42.15 4.00
2808 11310 8.469309 AGTCATGCATTATATAAGCAAAAGGT 57.531 30.769 17.65 4.82 42.15 3.50
2830 11332 4.328983 CGATTCTCGGAGCTCTAGATAGTC 59.671 50.000 14.64 10.95 36.00 2.59
2847 11349 1.098050 GCCATGACAAAGGCGATTCT 58.902 50.000 6.54 0.00 41.70 2.40
2871 11373 3.505680 TGCAAACGCTACAATCCAGATTT 59.494 39.130 0.00 0.00 0.00 2.17
2882 11384 0.657840 CTGGGCTATGCAAACGCTAC 59.342 55.000 0.00 0.00 0.00 3.58
2898 11400 9.037737 CAAATTATCCACAGAATTTTATGCTGG 57.962 33.333 0.00 0.00 32.23 4.85
2899 11401 9.590451 ACAAATTATCCACAGAATTTTATGCTG 57.410 29.630 0.00 0.00 32.23 4.41
2915 11417 7.614124 AATGTTGGCATCAAACAAATTATCC 57.386 32.000 1.83 0.00 33.50 2.59
2916 11418 7.964011 CCAAATGTTGGCATCAAACAAATTATC 59.036 33.333 1.83 0.00 45.17 1.75
2917 11419 7.818642 CCAAATGTTGGCATCAAACAAATTAT 58.181 30.769 1.83 0.00 45.17 1.28
2918 11420 7.199541 CCAAATGTTGGCATCAAACAAATTA 57.800 32.000 1.83 0.00 45.17 1.40
2919 11421 6.074544 CCAAATGTTGGCATCAAACAAATT 57.925 33.333 1.83 0.00 45.17 1.82
2920 11422 5.692613 CCAAATGTTGGCATCAAACAAAT 57.307 34.783 1.83 0.00 45.17 2.32
2949 11451 7.824587 GCTAATTGTTGGCTTGCCAAGTATTG 61.825 42.308 25.26 19.07 38.94 1.90
2950 11452 4.622260 AATTGTTGGCTTGCCAAGTATT 57.378 36.364 25.26 21.82 0.00 1.89
2951 11453 4.381932 GCTAATTGTTGGCTTGCCAAGTAT 60.382 41.667 25.26 18.02 33.94 2.12
2952 11454 3.056891 GCTAATTGTTGGCTTGCCAAGTA 60.057 43.478 25.26 16.72 33.94 2.24
2953 11455 2.289010 GCTAATTGTTGGCTTGCCAAGT 60.289 45.455 25.26 12.86 33.94 3.16
2954 11456 2.288948 TGCTAATTGTTGGCTTGCCAAG 60.289 45.455 25.26 14.47 38.08 3.61
2955 11457 1.690893 TGCTAATTGTTGGCTTGCCAA 59.309 42.857 21.59 21.59 38.08 4.52
2956 11458 1.336131 TGCTAATTGTTGGCTTGCCA 58.664 45.000 10.65 10.65 38.08 4.92
2957 11459 2.453983 TTGCTAATTGTTGGCTTGCC 57.546 45.000 4.43 4.43 38.08 4.52
2958 11460 4.442073 CGATATTGCTAATTGTTGGCTTGC 59.558 41.667 0.00 0.00 38.08 4.01
2959 11461 5.820131 TCGATATTGCTAATTGTTGGCTTG 58.180 37.500 0.00 0.00 38.08 4.01
2960 11462 6.449635 TTCGATATTGCTAATTGTTGGCTT 57.550 33.333 0.00 0.00 38.08 4.35
2961 11463 6.095440 ACTTTCGATATTGCTAATTGTTGGCT 59.905 34.615 0.00 0.00 38.08 4.75
2962 11464 6.265577 ACTTTCGATATTGCTAATTGTTGGC 58.734 36.000 0.00 0.00 37.69 4.52
2963 11465 7.432252 GGAACTTTCGATATTGCTAATTGTTGG 59.568 37.037 0.00 0.00 0.00 3.77
2964 11466 7.432252 GGGAACTTTCGATATTGCTAATTGTTG 59.568 37.037 0.00 0.00 0.00 3.33
2965 11467 7.122055 TGGGAACTTTCGATATTGCTAATTGTT 59.878 33.333 0.00 0.00 0.00 2.83
2966 11468 6.601613 TGGGAACTTTCGATATTGCTAATTGT 59.398 34.615 0.00 0.00 0.00 2.71
2967 11469 7.026631 TGGGAACTTTCGATATTGCTAATTG 57.973 36.000 0.00 0.00 0.00 2.32
2968 11470 7.639113 TTGGGAACTTTCGATATTGCTAATT 57.361 32.000 0.00 0.00 0.00 1.40
2969 11471 7.639113 TTTGGGAACTTTCGATATTGCTAAT 57.361 32.000 0.00 0.00 0.00 1.73
2970 11472 7.455641 TTTTGGGAACTTTCGATATTGCTAA 57.544 32.000 0.00 0.00 0.00 3.09
2971 11473 7.455641 TTTTTGGGAACTTTCGATATTGCTA 57.544 32.000 0.00 0.00 0.00 3.49
2972 11474 5.975693 TTTTGGGAACTTTCGATATTGCT 57.024 34.783 0.00 0.00 0.00 3.91
3007 11509 4.046938 TGTTTACTTGCCAATTTCGCAA 57.953 36.364 8.91 8.91 43.71 4.85
3008 11510 3.717400 TGTTTACTTGCCAATTTCGCA 57.283 38.095 0.00 0.00 0.00 5.10
3009 11511 4.233789 TCATGTTTACTTGCCAATTTCGC 58.766 39.130 0.00 0.00 0.00 4.70
3010 11512 7.754924 AGTTATCATGTTTACTTGCCAATTTCG 59.245 33.333 0.00 0.00 0.00 3.46
3011 11513 8.986477 AGTTATCATGTTTACTTGCCAATTTC 57.014 30.769 0.00 0.00 0.00 2.17
3013 11515 9.855021 GTTAGTTATCATGTTTACTTGCCAATT 57.145 29.630 1.11 0.00 0.00 2.32
3014 11516 8.466798 GGTTAGTTATCATGTTTACTTGCCAAT 58.533 33.333 1.11 0.00 0.00 3.16
3015 11517 7.448777 TGGTTAGTTATCATGTTTACTTGCCAA 59.551 33.333 12.00 0.00 0.00 4.52
3016 11518 6.943146 TGGTTAGTTATCATGTTTACTTGCCA 59.057 34.615 11.06 11.06 0.00 4.92
3017 11519 7.385778 TGGTTAGTTATCATGTTTACTTGCC 57.614 36.000 1.11 5.15 0.00 4.52
3018 11520 7.484959 GCTTGGTTAGTTATCATGTTTACTTGC 59.515 37.037 1.11 0.00 0.00 4.01
3019 11521 8.730680 AGCTTGGTTAGTTATCATGTTTACTTG 58.269 33.333 1.11 0.00 0.00 3.16
3020 11522 8.863872 AGCTTGGTTAGTTATCATGTTTACTT 57.136 30.769 1.11 0.00 0.00 2.24
3021 11523 8.100791 TGAGCTTGGTTAGTTATCATGTTTACT 58.899 33.333 0.00 1.46 0.00 2.24
3022 11524 8.263940 TGAGCTTGGTTAGTTATCATGTTTAC 57.736 34.615 0.00 0.00 0.00 2.01
3023 11525 8.856153 TTGAGCTTGGTTAGTTATCATGTTTA 57.144 30.769 0.00 0.00 0.00 2.01
3024 11526 7.575720 GCTTGAGCTTGGTTAGTTATCATGTTT 60.576 37.037 0.00 0.00 38.21 2.83
3025 11527 6.127897 GCTTGAGCTTGGTTAGTTATCATGTT 60.128 38.462 0.00 0.00 38.21 2.71
3026 11528 5.355350 GCTTGAGCTTGGTTAGTTATCATGT 59.645 40.000 0.00 0.00 38.21 3.21
3027 11529 5.503031 CGCTTGAGCTTGGTTAGTTATCATG 60.503 44.000 1.07 0.00 39.32 3.07
3028 11530 4.572389 CGCTTGAGCTTGGTTAGTTATCAT 59.428 41.667 1.07 0.00 39.32 2.45
3029 11531 3.932710 CGCTTGAGCTTGGTTAGTTATCA 59.067 43.478 1.07 0.00 39.32 2.15
3030 11532 4.181578 TCGCTTGAGCTTGGTTAGTTATC 58.818 43.478 1.07 0.00 39.32 1.75
3031 11533 4.202245 TCGCTTGAGCTTGGTTAGTTAT 57.798 40.909 1.07 0.00 39.32 1.89
3032 11534 3.671008 TCGCTTGAGCTTGGTTAGTTA 57.329 42.857 1.07 0.00 39.32 2.24
3033 11535 2.543777 TCGCTTGAGCTTGGTTAGTT 57.456 45.000 1.07 0.00 39.32 2.24
3034 11536 2.543777 TTCGCTTGAGCTTGGTTAGT 57.456 45.000 1.07 0.00 39.32 2.24
3035 11537 4.161333 CAATTTCGCTTGAGCTTGGTTAG 58.839 43.478 1.07 0.00 39.32 2.34
3036 11538 3.611530 GCAATTTCGCTTGAGCTTGGTTA 60.612 43.478 1.07 0.00 39.32 2.85
3037 11539 2.863704 GCAATTTCGCTTGAGCTTGGTT 60.864 45.455 1.07 0.00 39.32 3.67
3038 11540 1.336240 GCAATTTCGCTTGAGCTTGGT 60.336 47.619 1.07 0.00 39.32 3.67
3039 11541 1.343506 GCAATTTCGCTTGAGCTTGG 58.656 50.000 1.07 0.00 39.32 3.61
3040 11542 1.336148 TGGCAATTTCGCTTGAGCTTG 60.336 47.619 1.07 0.46 39.32 4.01
3041 11543 0.961019 TGGCAATTTCGCTTGAGCTT 59.039 45.000 1.07 0.00 39.32 3.74
3042 11544 1.133790 GATGGCAATTTCGCTTGAGCT 59.866 47.619 0.00 0.00 39.32 4.09
3043 11545 1.553308 GATGGCAATTTCGCTTGAGC 58.447 50.000 0.00 0.00 37.78 4.26
3044 11546 1.747355 AGGATGGCAATTTCGCTTGAG 59.253 47.619 0.00 0.00 0.00 3.02
3045 11547 1.838112 AGGATGGCAATTTCGCTTGA 58.162 45.000 0.00 0.00 0.00 3.02



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.