Multiple sequence alignment - TraesCS1A01G093000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G093000 chr1A 100.000 2591 0 0 1 2591 85822147 85824737 0.000000e+00 4785
1 TraesCS1A01G093000 chr1B 95.069 1602 69 7 685 2282 143059484 143057889 0.000000e+00 2512
2 TraesCS1A01G093000 chr1B 85.862 290 32 3 2 290 144727271 144727552 1.510000e-77 300
3 TraesCS1A01G093000 chr1D 93.824 1182 49 15 632 1809 89517378 89518539 0.000000e+00 1757
4 TraesCS1A01G093000 chr1D 87.423 326 35 5 116 438 89516529 89516851 1.130000e-98 370
5 TraesCS1A01G093000 chr1D 89.418 189 13 4 2298 2480 89533143 89533330 5.580000e-57 231
6 TraesCS1A01G093000 chr1D 89.437 142 15 0 2146 2287 89532953 89533094 2.050000e-41 180
7 TraesCS1A01G093000 chr2B 85.455 110 16 0 2478 2587 239825456 239825347 5.860000e-22 115


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G093000 chr1A 85822147 85824737 2590 False 4785.0 4785 100.0000 1 2591 1 chr1A.!!$F1 2590
1 TraesCS1A01G093000 chr1B 143057889 143059484 1595 True 2512.0 2512 95.0690 685 2282 1 chr1B.!!$R1 1597
2 TraesCS1A01G093000 chr1D 89516529 89518539 2010 False 1063.5 1757 90.6235 116 1809 2 chr1D.!!$F1 1693

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
230 231 0.035458 CACAGTTGGAGAGGGACCAC 59.965 60.0 0.0 0.0 37.13 4.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1971 2363 0.109689 ACTAACACGCGCTGACTCTC 60.11 55.0 5.73 0.0 0.0 3.2 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.489990 CTTCATCTGATTCATGTACTTGTTCT 57.510 34.615 8.46 0.00 0.00 3.01
26 27 8.853077 TTCATCTGATTCATGTACTTGTTCTT 57.147 30.769 8.46 0.00 0.00 2.52
27 28 8.484641 TCATCTGATTCATGTACTTGTTCTTC 57.515 34.615 8.46 3.43 0.00 2.87
28 29 7.550551 TCATCTGATTCATGTACTTGTTCTTCC 59.449 37.037 8.46 0.00 0.00 3.46
29 30 7.009179 TCTGATTCATGTACTTGTTCTTCCT 57.991 36.000 8.46 0.00 0.00 3.36
30 31 8.134202 TCTGATTCATGTACTTGTTCTTCCTA 57.866 34.615 8.46 0.00 0.00 2.94
31 32 8.253810 TCTGATTCATGTACTTGTTCTTCCTAG 58.746 37.037 8.46 0.00 0.00 3.02
32 33 8.134202 TGATTCATGTACTTGTTCTTCCTAGA 57.866 34.615 8.46 0.00 0.00 2.43
33 34 8.762645 TGATTCATGTACTTGTTCTTCCTAGAT 58.237 33.333 8.46 0.00 0.00 1.98
34 35 9.606631 GATTCATGTACTTGTTCTTCCTAGATT 57.393 33.333 8.46 0.00 0.00 2.40
43 44 9.793259 ACTTGTTCTTCCTAGATTAAATGTTGA 57.207 29.630 0.00 0.00 0.00 3.18
53 54 9.956720 CCTAGATTAAATGTTGAATCATGAACC 57.043 33.333 0.00 0.00 35.00 3.62
56 57 8.689972 AGATTAAATGTTGAATCATGAACCTCC 58.310 33.333 0.00 0.00 35.00 4.30
57 58 8.599624 ATTAAATGTTGAATCATGAACCTCCT 57.400 30.769 0.00 0.00 0.00 3.69
58 59 6.521151 AAATGTTGAATCATGAACCTCCTC 57.479 37.500 0.00 0.00 0.00 3.71
59 60 3.599343 TGTTGAATCATGAACCTCCTCG 58.401 45.455 0.00 0.00 0.00 4.63
60 61 2.315925 TGAATCATGAACCTCCTCGC 57.684 50.000 0.00 0.00 0.00 5.03
61 62 1.554617 TGAATCATGAACCTCCTCGCA 59.445 47.619 0.00 0.00 0.00 5.10
62 63 1.936547 GAATCATGAACCTCCTCGCAC 59.063 52.381 0.00 0.00 0.00 5.34
63 64 1.198713 ATCATGAACCTCCTCGCACT 58.801 50.000 0.00 0.00 0.00 4.40
64 65 0.247460 TCATGAACCTCCTCGCACTG 59.753 55.000 0.00 0.00 0.00 3.66
65 66 1.078848 ATGAACCTCCTCGCACTGC 60.079 57.895 0.00 0.00 0.00 4.40
66 67 1.830587 ATGAACCTCCTCGCACTGCA 61.831 55.000 1.11 0.00 0.00 4.41
67 68 1.739562 GAACCTCCTCGCACTGCAG 60.740 63.158 13.48 13.48 0.00 4.41
68 69 3.245668 AACCTCCTCGCACTGCAGG 62.246 63.158 19.93 8.27 0.00 4.85
69 70 3.699894 CCTCCTCGCACTGCAGGT 61.700 66.667 19.93 0.24 31.92 4.00
71 72 3.231889 CTCCTCGCACTGCAGGTGT 62.232 63.158 19.93 0.00 46.86 4.16
72 73 1.877576 CTCCTCGCACTGCAGGTGTA 61.878 60.000 19.93 6.09 46.86 2.90
73 74 1.446792 CCTCGCACTGCAGGTGTAG 60.447 63.158 19.93 13.87 46.86 2.74
74 75 1.290324 CTCGCACTGCAGGTGTAGT 59.710 57.895 19.93 0.00 46.86 2.73
75 76 0.734253 CTCGCACTGCAGGTGTAGTC 60.734 60.000 19.93 0.88 46.86 2.59
76 77 2.088763 CGCACTGCAGGTGTAGTCG 61.089 63.158 19.93 8.73 46.86 4.18
77 78 2.383527 GCACTGCAGGTGTAGTCGC 61.384 63.158 19.93 3.47 46.86 5.19
78 79 1.290324 CACTGCAGGTGTAGTCGCT 59.710 57.895 19.93 0.00 38.95 4.93
79 80 0.734253 CACTGCAGGTGTAGTCGCTC 60.734 60.000 19.93 0.00 38.95 5.03
80 81 1.153745 CTGCAGGTGTAGTCGCTCC 60.154 63.158 5.57 0.00 0.00 4.70
81 82 1.877576 CTGCAGGTGTAGTCGCTCCA 61.878 60.000 5.57 0.00 0.00 3.86
82 83 1.153745 GCAGGTGTAGTCGCTCCAG 60.154 63.158 0.00 0.00 0.00 3.86
83 84 1.595993 GCAGGTGTAGTCGCTCCAGA 61.596 60.000 0.00 0.00 0.00 3.86
84 85 0.888619 CAGGTGTAGTCGCTCCAGAA 59.111 55.000 0.00 0.00 0.00 3.02
85 86 1.135257 CAGGTGTAGTCGCTCCAGAAG 60.135 57.143 0.00 0.00 0.00 2.85
95 96 3.639099 CTCCAGAAGCTTGCTTGGA 57.361 52.632 12.92 18.08 0.00 3.53
96 97 2.125773 CTCCAGAAGCTTGCTTGGAT 57.874 50.000 18.97 0.00 0.00 3.41
97 98 2.015587 CTCCAGAAGCTTGCTTGGATC 58.984 52.381 18.97 0.00 0.00 3.36
98 99 1.632409 TCCAGAAGCTTGCTTGGATCT 59.368 47.619 12.92 0.69 0.00 2.75
99 100 2.040813 TCCAGAAGCTTGCTTGGATCTT 59.959 45.455 12.92 0.00 0.00 2.40
100 101 2.422832 CCAGAAGCTTGCTTGGATCTTC 59.577 50.000 12.92 0.00 34.84 2.87
101 102 3.079578 CAGAAGCTTGCTTGGATCTTCA 58.920 45.455 12.92 0.00 36.52 3.02
102 103 3.080319 AGAAGCTTGCTTGGATCTTCAC 58.920 45.455 12.92 0.00 36.52 3.18
103 104 1.831580 AGCTTGCTTGGATCTTCACC 58.168 50.000 0.00 0.00 0.00 4.02
104 105 1.074405 AGCTTGCTTGGATCTTCACCA 59.926 47.619 0.00 0.00 35.47 4.17
105 106 2.097825 GCTTGCTTGGATCTTCACCAT 58.902 47.619 0.00 0.00 37.26 3.55
106 107 2.098770 GCTTGCTTGGATCTTCACCATC 59.901 50.000 0.00 0.00 37.26 3.51
107 108 3.349927 CTTGCTTGGATCTTCACCATCA 58.650 45.455 0.00 0.00 37.26 3.07
108 109 2.715046 TGCTTGGATCTTCACCATCAC 58.285 47.619 0.00 0.00 37.26 3.06
109 110 2.019984 GCTTGGATCTTCACCATCACC 58.980 52.381 0.00 0.00 37.26 4.02
110 111 2.648059 CTTGGATCTTCACCATCACCC 58.352 52.381 0.00 0.00 37.26 4.61
111 112 0.918983 TGGATCTTCACCATCACCCC 59.081 55.000 0.00 0.00 32.03 4.95
112 113 0.183731 GGATCTTCACCATCACCCCC 59.816 60.000 0.00 0.00 0.00 5.40
113 114 1.216990 GATCTTCACCATCACCCCCT 58.783 55.000 0.00 0.00 0.00 4.79
114 115 1.566231 GATCTTCACCATCACCCCCTT 59.434 52.381 0.00 0.00 0.00 3.95
131 132 1.071605 CTTGCGAAAGAGAACCCTCG 58.928 55.000 0.00 0.00 44.08 4.63
135 136 1.067354 GCGAAAGAGAACCCTCGGTTA 60.067 52.381 0.00 0.00 46.95 2.85
142 143 1.304713 AACCCTCGGTTAGGCTCGA 60.305 57.895 0.00 0.00 44.94 4.04
151 152 2.541556 GGTTAGGCTCGATGTGACTTC 58.458 52.381 0.00 0.00 0.00 3.01
154 155 1.550327 AGGCTCGATGTGACTTCTCA 58.450 50.000 0.00 0.00 0.00 3.27
159 160 3.122613 GCTCGATGTGACTTCTCAAACAG 59.877 47.826 0.00 0.00 0.00 3.16
167 168 5.163311 TGTGACTTCTCAAACAGGATCTTGA 60.163 40.000 12.40 3.44 0.00 3.02
170 171 4.699257 ACTTCTCAAACAGGATCTTGATGC 59.301 41.667 12.40 0.00 31.40 3.91
179 180 4.204799 CAGGATCTTGATGCATCTTCCAA 58.795 43.478 26.32 12.60 0.00 3.53
230 231 0.035458 CACAGTTGGAGAGGGACCAC 59.965 60.000 0.00 0.00 37.13 4.16
231 232 1.128188 ACAGTTGGAGAGGGACCACC 61.128 60.000 0.00 0.00 37.13 4.61
232 233 1.127567 CAGTTGGAGAGGGACCACCA 61.128 60.000 0.00 0.00 43.89 4.17
240 242 1.852626 AGGGACCACCAAGGAAGGG 60.853 63.158 0.00 0.00 43.89 3.95
248 250 4.115199 CAAGGAAGGGAGGGGCGG 62.115 72.222 0.00 0.00 0.00 6.13
274 276 2.484889 GATTAGGGCGAGGACATGAAC 58.515 52.381 0.00 0.00 0.00 3.18
275 277 0.174845 TTAGGGCGAGGACATGAACG 59.825 55.000 0.00 0.43 0.00 3.95
283 285 2.858344 CGAGGACATGAACGGATGTAAC 59.142 50.000 0.00 0.00 36.67 2.50
299 301 3.848726 TGTAACCGACGATAAAGGAACC 58.151 45.455 0.00 0.00 0.00 3.62
306 308 1.270947 ACGATAAAGGAACCCGCAACA 60.271 47.619 0.00 0.00 0.00 3.33
334 336 1.474677 CGCGAGGAGTAGAGAACCCTA 60.475 57.143 0.00 0.00 31.22 3.53
336 338 2.853705 CGAGGAGTAGAGAACCCTAGG 58.146 57.143 0.06 0.06 31.22 3.02
337 339 2.173143 CGAGGAGTAGAGAACCCTAGGT 59.827 54.545 8.29 0.00 37.65 3.08
348 350 3.032459 GAACCCTAGGTTGAGACCCTAG 58.968 54.545 8.29 6.52 46.95 3.02
381 384 5.985530 TCATTCAGTTCTATTAGGTCATGCG 59.014 40.000 0.00 0.00 0.00 4.73
430 433 6.068498 CCATCTCCCCTATATCTCTACCTCTT 60.068 46.154 0.00 0.00 0.00 2.85
433 436 6.800606 TCTCCCCTATATCTCTACCTCTTTCT 59.199 42.308 0.00 0.00 0.00 2.52
434 437 7.034967 TCCCCTATATCTCTACCTCTTTCTC 57.965 44.000 0.00 0.00 0.00 2.87
435 438 6.011451 TCCCCTATATCTCTACCTCTTTCTCC 60.011 46.154 0.00 0.00 0.00 3.71
439 442 4.953940 ATCTCTACCTCTTTCTCCATGC 57.046 45.455 0.00 0.00 0.00 4.06
440 443 3.987745 TCTCTACCTCTTTCTCCATGCT 58.012 45.455 0.00 0.00 0.00 3.79
441 444 3.703556 TCTCTACCTCTTTCTCCATGCTG 59.296 47.826 0.00 0.00 0.00 4.41
444 447 1.712977 CCTCTTTCTCCATGCTGCGC 61.713 60.000 0.00 0.00 0.00 6.09
445 448 1.712977 CTCTTTCTCCATGCTGCGCC 61.713 60.000 4.18 0.00 0.00 6.53
446 449 3.104602 CTTTCTCCATGCTGCGCCG 62.105 63.158 4.18 0.00 0.00 6.46
460 463 3.821055 GCCGCGGCCAAAATGCTA 61.821 61.111 39.89 0.00 34.56 3.49
461 464 2.881389 CCGCGGCCAAAATGCTAA 59.119 55.556 14.67 0.00 0.00 3.09
462 465 1.214062 CCGCGGCCAAAATGCTAAA 59.786 52.632 14.67 0.00 0.00 1.85
463 466 0.801836 CCGCGGCCAAAATGCTAAAG 60.802 55.000 14.67 0.00 0.00 1.85
466 469 1.994916 CGGCCAAAATGCTAAAGTGG 58.005 50.000 2.24 0.00 0.00 4.00
475 861 3.923017 ATGCTAAAGTGGTTTCAGTGC 57.077 42.857 0.00 0.00 0.00 4.40
501 887 1.225376 CCGCTGCGAAACTTGGTGTA 61.225 55.000 25.45 0.00 0.00 2.90
513 899 6.750039 CGAAACTTGGTGTAAACTGAAATGTT 59.250 34.615 0.00 0.00 0.00 2.71
515 901 9.575783 GAAACTTGGTGTAAACTGAAATGTTAA 57.424 29.630 0.00 0.00 0.00 2.01
516 902 9.930693 AAACTTGGTGTAAACTGAAATGTTAAA 57.069 25.926 0.00 0.00 0.00 1.52
517 903 9.581099 AACTTGGTGTAAACTGAAATGTTAAAG 57.419 29.630 0.00 0.00 0.00 1.85
518 904 8.745590 ACTTGGTGTAAACTGAAATGTTAAAGT 58.254 29.630 0.00 0.00 0.00 2.66
529 915 9.871238 ACTGAAATGTTAAAGTATGATACGACT 57.129 29.630 0.00 0.00 0.00 4.18
568 954 9.982651 AAAATATGATACGACTAGTAGTGCAAT 57.017 29.630 17.80 10.51 38.94 3.56
600 990 7.566760 AACTCTACAAATTGACATGACACAA 57.433 32.000 0.00 3.47 0.00 3.33
604 994 8.310406 TCTACAAATTGACATGACACAACTAG 57.690 34.615 0.00 0.00 0.00 2.57
605 995 5.762045 ACAAATTGACATGACACAACTAGC 58.238 37.500 0.00 0.00 0.00 3.42
606 996 5.156355 CAAATTGACATGACACAACTAGCC 58.844 41.667 0.00 0.00 0.00 3.93
607 997 2.472695 TGACATGACACAACTAGCCC 57.527 50.000 0.00 0.00 0.00 5.19
608 998 1.696884 TGACATGACACAACTAGCCCA 59.303 47.619 0.00 0.00 0.00 5.36
610 1000 3.146066 GACATGACACAACTAGCCCAAA 58.854 45.455 0.00 0.00 0.00 3.28
611 1001 2.884639 ACATGACACAACTAGCCCAAAC 59.115 45.455 0.00 0.00 0.00 2.93
612 1002 2.719531 TGACACAACTAGCCCAAACA 57.280 45.000 0.00 0.00 0.00 2.83
613 1003 3.222173 TGACACAACTAGCCCAAACAT 57.778 42.857 0.00 0.00 0.00 2.71
614 1004 4.359434 TGACACAACTAGCCCAAACATA 57.641 40.909 0.00 0.00 0.00 2.29
615 1005 4.917385 TGACACAACTAGCCCAAACATAT 58.083 39.130 0.00 0.00 0.00 1.78
616 1006 6.056090 TGACACAACTAGCCCAAACATATA 57.944 37.500 0.00 0.00 0.00 0.86
617 1007 6.658849 TGACACAACTAGCCCAAACATATAT 58.341 36.000 0.00 0.00 0.00 0.86
618 1008 6.542005 TGACACAACTAGCCCAAACATATATG 59.458 38.462 11.29 11.29 0.00 1.78
619 1009 5.827797 ACACAACTAGCCCAAACATATATGG 59.172 40.000 16.96 0.32 36.42 2.74
620 1010 5.827797 CACAACTAGCCCAAACATATATGGT 59.172 40.000 16.96 7.64 34.79 3.55
621 1011 6.017109 CACAACTAGCCCAAACATATATGGTC 60.017 42.308 16.96 0.00 34.79 4.02
622 1012 4.894784 ACTAGCCCAAACATATATGGTCG 58.105 43.478 16.96 0.00 34.79 4.79
623 1013 3.140325 AGCCCAAACATATATGGTCGG 57.860 47.619 16.96 9.24 34.79 4.79
624 1014 2.441750 AGCCCAAACATATATGGTCGGT 59.558 45.455 16.96 4.76 34.79 4.69
625 1015 2.552315 GCCCAAACATATATGGTCGGTG 59.448 50.000 16.96 5.87 34.79 4.94
626 1016 3.746114 GCCCAAACATATATGGTCGGTGA 60.746 47.826 16.96 0.00 34.79 4.02
627 1017 3.813166 CCCAAACATATATGGTCGGTGAC 59.187 47.826 16.96 0.00 34.79 3.67
628 1018 4.444306 CCCAAACATATATGGTCGGTGACT 60.444 45.833 16.96 0.00 34.79 3.41
629 1019 5.221561 CCCAAACATATATGGTCGGTGACTA 60.222 44.000 16.96 0.00 34.79 2.59
630 1020 5.694910 CCAAACATATATGGTCGGTGACTAC 59.305 44.000 16.96 0.00 32.47 2.73
631 1021 6.277605 CAAACATATATGGTCGGTGACTACA 58.722 40.000 16.96 0.00 32.47 2.74
632 1022 5.449107 ACATATATGGTCGGTGACTACAC 57.551 43.478 16.96 0.00 45.27 2.90
680 1070 5.179368 TCTGAAACAAAATACTGCTTCTCCG 59.821 40.000 0.00 0.00 0.00 4.63
713 1103 2.541346 CCATTCCGATGACAAGATCACG 59.459 50.000 0.00 0.00 41.24 4.35
716 1106 1.482621 CCGATGACAAGATCACGCGG 61.483 60.000 12.47 0.00 46.19 6.46
782 1172 2.997315 CCCGCCTCAGTCACCTGA 60.997 66.667 0.00 0.00 45.44 3.86
787 1177 1.886585 CCTCAGTCACCTGACCGAG 59.113 63.158 10.57 10.57 44.89 4.63
790 1180 1.699730 TCAGTCACCTGACCGAGAAA 58.300 50.000 1.66 0.00 45.85 2.52
916 1306 3.020237 GCGACCCCTTCCTCCTCAC 62.020 68.421 0.00 0.00 0.00 3.51
996 1388 4.618460 CGAGTTAGGATCCATAACCCATCG 60.618 50.000 15.82 17.64 34.34 3.84
1618 2010 2.092646 GGAGAGACAGTCAGAGAGGCTA 60.093 54.545 2.66 0.00 0.00 3.93
1686 2078 2.059575 CAGTACACTGTACACGCGC 58.940 57.895 19.34 0.00 39.09 6.86
1717 2109 7.277981 AGTTTCTTGTATCTCGTCGCAAAATAT 59.722 33.333 0.00 0.00 0.00 1.28
1754 2146 7.955502 TGTGTATTACTGCTGTTTAATACGTG 58.044 34.615 17.50 0.00 41.27 4.49
1837 2229 7.412455 GCTCAAATGTTCGGTTTTTCTTTTTCA 60.412 33.333 0.00 0.00 0.00 2.69
1907 2299 1.935933 ATAAACCAGATCGTCCACGC 58.064 50.000 0.00 0.00 39.60 5.34
1941 2333 3.964031 AGCGAAGAGTCCCAGATAGAATT 59.036 43.478 0.00 0.00 0.00 2.17
1953 2345 7.012799 GTCCCAGATAGAATTGGAATTGAGTTC 59.987 40.741 0.00 0.00 36.55 3.01
1971 2363 5.007626 TGAGTTCGTTCAAATTCTGTTCTGG 59.992 40.000 0.00 0.00 0.00 3.86
1979 2371 5.545588 TCAAATTCTGTTCTGGAGAGTCAG 58.454 41.667 0.00 0.00 36.17 3.51
2031 2423 3.181479 CGTCTCAGATCGATTAAACCCCA 60.181 47.826 0.00 0.00 0.00 4.96
2033 2425 3.134081 TCTCAGATCGATTAAACCCCACC 59.866 47.826 0.00 0.00 0.00 4.61
2042 2434 4.610333 GATTAAACCCCACCTGGAAATCT 58.390 43.478 0.00 0.00 37.39 2.40
2113 2505 4.406173 CCACGAGAGCACGCGACT 62.406 66.667 15.93 10.13 41.48 4.18
2278 2672 0.746659 GTGCCCTGTTTTGCTCTTGT 59.253 50.000 0.00 0.00 0.00 3.16
2282 2676 1.001378 CCCTGTTTTGCTCTTGTTCGG 60.001 52.381 0.00 0.00 0.00 4.30
2283 2677 1.001378 CCTGTTTTGCTCTTGTTCGGG 60.001 52.381 0.00 0.00 0.00 5.14
2284 2678 1.676006 CTGTTTTGCTCTTGTTCGGGT 59.324 47.619 0.00 0.00 0.00 5.28
2285 2679 1.673920 TGTTTTGCTCTTGTTCGGGTC 59.326 47.619 0.00 0.00 0.00 4.46
2286 2680 0.941542 TTTTGCTCTTGTTCGGGTCG 59.058 50.000 0.00 0.00 0.00 4.79
2287 2681 0.105224 TTTGCTCTTGTTCGGGTCGA 59.895 50.000 0.00 0.00 0.00 4.20
2288 2682 0.320374 TTGCTCTTGTTCGGGTCGAT 59.680 50.000 0.00 0.00 35.23 3.59
2289 2683 0.320374 TGCTCTTGTTCGGGTCGATT 59.680 50.000 0.00 0.00 35.23 3.34
2290 2684 1.270625 TGCTCTTGTTCGGGTCGATTT 60.271 47.619 0.00 0.00 35.23 2.17
2291 2685 1.804748 GCTCTTGTTCGGGTCGATTTT 59.195 47.619 0.00 0.00 35.23 1.82
2292 2686 2.412847 GCTCTTGTTCGGGTCGATTTTG 60.413 50.000 0.00 0.00 35.23 2.44
2293 2687 2.806244 CTCTTGTTCGGGTCGATTTTGT 59.194 45.455 0.00 0.00 35.23 2.83
2294 2688 2.803956 TCTTGTTCGGGTCGATTTTGTC 59.196 45.455 0.00 0.00 35.23 3.18
2295 2689 2.536761 TGTTCGGGTCGATTTTGTCT 57.463 45.000 0.00 0.00 35.23 3.41
2296 2690 2.139917 TGTTCGGGTCGATTTTGTCTG 58.860 47.619 0.00 0.00 35.23 3.51
2297 2691 2.224090 TGTTCGGGTCGATTTTGTCTGA 60.224 45.455 0.00 0.00 35.23 3.27
2298 2692 2.803956 GTTCGGGTCGATTTTGTCTGAA 59.196 45.455 0.00 0.00 35.23 3.02
2299 2693 3.328382 TCGGGTCGATTTTGTCTGAAT 57.672 42.857 0.00 0.00 0.00 2.57
2300 2694 3.670625 TCGGGTCGATTTTGTCTGAATT 58.329 40.909 0.00 0.00 0.00 2.17
2301 2695 4.069304 TCGGGTCGATTTTGTCTGAATTT 58.931 39.130 0.00 0.00 0.00 1.82
2302 2696 4.153475 TCGGGTCGATTTTGTCTGAATTTC 59.847 41.667 0.00 0.00 0.00 2.17
2303 2697 4.154195 CGGGTCGATTTTGTCTGAATTTCT 59.846 41.667 0.00 0.00 0.00 2.52
2304 2698 5.334879 CGGGTCGATTTTGTCTGAATTTCTT 60.335 40.000 0.00 0.00 0.00 2.52
2305 2699 6.086871 GGGTCGATTTTGTCTGAATTTCTTC 58.913 40.000 0.00 0.00 0.00 2.87
2306 2700 6.072452 GGGTCGATTTTGTCTGAATTTCTTCT 60.072 38.462 0.00 0.00 32.29 2.85
2307 2701 6.798959 GGTCGATTTTGTCTGAATTTCTTCTG 59.201 38.462 0.00 0.00 32.29 3.02
2308 2702 6.304208 GTCGATTTTGTCTGAATTTCTTCTGC 59.696 38.462 0.00 0.00 32.14 4.26
2309 2703 6.205464 TCGATTTTGTCTGAATTTCTTCTGCT 59.795 34.615 0.00 0.00 32.14 4.24
2310 2704 6.860023 CGATTTTGTCTGAATTTCTTCTGCTT 59.140 34.615 0.00 0.00 32.14 3.91
2311 2705 7.149015 CGATTTTGTCTGAATTTCTTCTGCTTG 60.149 37.037 0.00 0.00 32.14 4.01
2312 2706 4.494350 TGTCTGAATTTCTTCTGCTTGC 57.506 40.909 0.00 0.00 32.14 4.01
2313 2707 4.139786 TGTCTGAATTTCTTCTGCTTGCT 58.860 39.130 0.00 0.00 32.14 3.91
2314 2708 4.214971 TGTCTGAATTTCTTCTGCTTGCTC 59.785 41.667 0.00 0.00 32.14 4.26
2315 2709 3.434641 TCTGAATTTCTTCTGCTTGCTCG 59.565 43.478 0.00 0.00 32.14 5.03
2316 2710 3.402110 TGAATTTCTTCTGCTTGCTCGA 58.598 40.909 0.00 0.00 32.29 4.04
2317 2711 4.005650 TGAATTTCTTCTGCTTGCTCGAT 58.994 39.130 0.00 0.00 32.29 3.59
2318 2712 4.456911 TGAATTTCTTCTGCTTGCTCGATT 59.543 37.500 0.00 0.00 32.29 3.34
2319 2713 5.048504 TGAATTTCTTCTGCTTGCTCGATTT 60.049 36.000 0.00 0.00 32.29 2.17
2320 2714 4.836125 TTTCTTCTGCTTGCTCGATTTT 57.164 36.364 0.00 0.00 0.00 1.82
2321 2715 4.836125 TTCTTCTGCTTGCTCGATTTTT 57.164 36.364 0.00 0.00 0.00 1.94
2338 2732 2.060050 TTTTGGGTGGTGACAATCGT 57.940 45.000 0.00 0.00 46.06 3.73
2339 2733 2.060050 TTTGGGTGGTGACAATCGTT 57.940 45.000 0.00 0.00 46.06 3.85
2340 2734 2.060050 TTGGGTGGTGACAATCGTTT 57.940 45.000 0.00 0.00 46.06 3.60
2341 2735 2.932855 TGGGTGGTGACAATCGTTTA 57.067 45.000 0.00 0.00 46.06 2.01
2342 2736 2.496111 TGGGTGGTGACAATCGTTTAC 58.504 47.619 0.00 0.00 46.06 2.01
2343 2737 1.808343 GGGTGGTGACAATCGTTTACC 59.192 52.381 0.00 0.00 46.06 2.85
2344 2738 1.461897 GGTGGTGACAATCGTTTACCG 59.538 52.381 0.00 0.00 46.06 4.02
2345 2739 1.461897 GTGGTGACAATCGTTTACCGG 59.538 52.381 0.00 0.00 46.06 5.28
2346 2740 1.343789 TGGTGACAATCGTTTACCGGA 59.656 47.619 9.46 0.00 36.15 5.14
2347 2741 1.997606 GGTGACAATCGTTTACCGGAG 59.002 52.381 9.46 0.00 37.11 4.63
2348 2742 1.392510 GTGACAATCGTTTACCGGAGC 59.607 52.381 9.46 0.00 37.11 4.70
2349 2743 0.643820 GACAATCGTTTACCGGAGCG 59.356 55.000 9.46 6.93 37.11 5.03
2350 2744 0.037975 ACAATCGTTTACCGGAGCGT 60.038 50.000 9.46 0.00 37.11 5.07
2351 2745 1.073177 CAATCGTTTACCGGAGCGTT 58.927 50.000 9.46 0.00 37.11 4.84
2352 2746 1.073177 AATCGTTTACCGGAGCGTTG 58.927 50.000 9.46 0.00 37.11 4.10
2353 2747 0.037975 ATCGTTTACCGGAGCGTTGT 60.038 50.000 9.46 0.00 37.11 3.32
2354 2748 0.249405 TCGTTTACCGGAGCGTTGTT 60.249 50.000 9.46 0.00 37.11 2.83
2355 2749 0.162294 CGTTTACCGGAGCGTTGTTC 59.838 55.000 9.46 0.00 0.00 3.18
2356 2750 1.219646 GTTTACCGGAGCGTTGTTCA 58.780 50.000 9.46 0.00 0.00 3.18
2357 2751 1.193874 GTTTACCGGAGCGTTGTTCAG 59.806 52.381 9.46 0.00 0.00 3.02
2358 2752 0.390124 TTACCGGAGCGTTGTTCAGT 59.610 50.000 9.46 0.00 0.00 3.41
2359 2753 1.246649 TACCGGAGCGTTGTTCAGTA 58.753 50.000 9.46 0.00 0.00 2.74
2360 2754 0.390124 ACCGGAGCGTTGTTCAGTAA 59.610 50.000 9.46 0.00 0.00 2.24
2361 2755 1.068474 CCGGAGCGTTGTTCAGTAAG 58.932 55.000 0.00 0.00 0.00 2.34
2362 2756 0.438830 CGGAGCGTTGTTCAGTAAGC 59.561 55.000 0.00 0.00 0.00 3.09
2363 2757 0.438830 GGAGCGTTGTTCAGTAAGCG 59.561 55.000 0.00 0.00 0.00 4.68
2364 2758 1.415374 GAGCGTTGTTCAGTAAGCGA 58.585 50.000 0.00 0.00 0.00 4.93
2365 2759 1.387084 GAGCGTTGTTCAGTAAGCGAG 59.613 52.381 0.00 0.00 0.00 5.03
2366 2760 0.179248 GCGTTGTTCAGTAAGCGAGC 60.179 55.000 0.00 0.00 0.00 5.03
2367 2761 1.419374 CGTTGTTCAGTAAGCGAGCT 58.581 50.000 0.00 0.00 0.00 4.09
2368 2762 2.592194 CGTTGTTCAGTAAGCGAGCTA 58.408 47.619 0.00 0.00 0.00 3.32
2369 2763 2.984471 CGTTGTTCAGTAAGCGAGCTAA 59.016 45.455 0.00 0.00 0.00 3.09
2370 2764 3.059570 CGTTGTTCAGTAAGCGAGCTAAG 59.940 47.826 0.00 0.00 0.00 2.18
2371 2765 4.235360 GTTGTTCAGTAAGCGAGCTAAGA 58.765 43.478 0.00 0.00 0.00 2.10
2372 2766 4.720649 TGTTCAGTAAGCGAGCTAAGAT 57.279 40.909 0.00 0.00 0.00 2.40
2373 2767 4.424626 TGTTCAGTAAGCGAGCTAAGATG 58.575 43.478 0.00 0.00 0.00 2.90
2374 2768 3.717400 TCAGTAAGCGAGCTAAGATGG 57.283 47.619 0.00 0.00 0.00 3.51
2375 2769 2.131183 CAGTAAGCGAGCTAAGATGGC 58.869 52.381 0.00 0.00 0.00 4.40
2376 2770 1.757118 AGTAAGCGAGCTAAGATGGCA 59.243 47.619 0.00 0.00 0.00 4.92
2377 2771 2.131183 GTAAGCGAGCTAAGATGGCAG 58.869 52.381 0.00 0.00 0.00 4.85
2378 2772 0.826715 AAGCGAGCTAAGATGGCAGA 59.173 50.000 0.00 0.00 0.00 4.26
2379 2773 0.388659 AGCGAGCTAAGATGGCAGAG 59.611 55.000 0.00 0.00 0.00 3.35
2380 2774 1.220817 GCGAGCTAAGATGGCAGAGC 61.221 60.000 0.00 0.00 35.07 4.09
2413 2807 1.586422 CACCATCGTGGCCTCTTATG 58.414 55.000 3.32 7.14 42.67 1.90
2414 2808 1.134401 CACCATCGTGGCCTCTTATGT 60.134 52.381 3.32 0.00 42.67 2.29
2415 2809 1.139058 ACCATCGTGGCCTCTTATGTC 59.861 52.381 3.32 0.00 42.67 3.06
2416 2810 1.414181 CCATCGTGGCCTCTTATGTCT 59.586 52.381 3.32 0.00 0.00 3.41
2417 2811 2.158900 CCATCGTGGCCTCTTATGTCTT 60.159 50.000 3.32 0.00 0.00 3.01
2418 2812 2.961526 TCGTGGCCTCTTATGTCTTC 57.038 50.000 3.32 0.00 0.00 2.87
2419 2813 1.480954 TCGTGGCCTCTTATGTCTTCC 59.519 52.381 3.32 0.00 0.00 3.46
2420 2814 1.207089 CGTGGCCTCTTATGTCTTCCA 59.793 52.381 3.32 0.00 0.00 3.53
2421 2815 2.354704 CGTGGCCTCTTATGTCTTCCAA 60.355 50.000 3.32 0.00 0.00 3.53
2422 2816 3.682718 CGTGGCCTCTTATGTCTTCCAAT 60.683 47.826 3.32 0.00 0.00 3.16
2423 2817 4.273318 GTGGCCTCTTATGTCTTCCAATT 58.727 43.478 3.32 0.00 0.00 2.32
2424 2818 4.336713 GTGGCCTCTTATGTCTTCCAATTC 59.663 45.833 3.32 0.00 0.00 2.17
2425 2819 4.018506 TGGCCTCTTATGTCTTCCAATTCA 60.019 41.667 3.32 0.00 0.00 2.57
2426 2820 4.949856 GGCCTCTTATGTCTTCCAATTCAA 59.050 41.667 0.00 0.00 0.00 2.69
2427 2821 5.418840 GGCCTCTTATGTCTTCCAATTCAAA 59.581 40.000 0.00 0.00 0.00 2.69
2428 2822 6.405176 GGCCTCTTATGTCTTCCAATTCAAAG 60.405 42.308 0.00 0.00 0.00 2.77
2429 2823 6.151817 GCCTCTTATGTCTTCCAATTCAAAGT 59.848 38.462 0.00 0.00 0.00 2.66
2430 2824 7.309438 GCCTCTTATGTCTTCCAATTCAAAGTT 60.309 37.037 0.00 0.00 0.00 2.66
2431 2825 8.025445 CCTCTTATGTCTTCCAATTCAAAGTTG 58.975 37.037 0.00 0.00 0.00 3.16
2432 2826 8.690203 TCTTATGTCTTCCAATTCAAAGTTGA 57.310 30.769 0.00 0.00 34.92 3.18
2433 2827 9.300681 TCTTATGTCTTCCAATTCAAAGTTGAT 57.699 29.630 0.00 0.00 37.00 2.57
2434 2828 9.918630 CTTATGTCTTCCAATTCAAAGTTGATT 57.081 29.630 0.00 0.00 37.00 2.57
2437 2831 7.359595 TGTCTTCCAATTCAAAGTTGATTACG 58.640 34.615 0.00 0.00 37.00 3.18
2438 2832 7.227711 TGTCTTCCAATTCAAAGTTGATTACGA 59.772 33.333 0.00 0.00 37.00 3.43
2439 2833 8.073768 GTCTTCCAATTCAAAGTTGATTACGAA 58.926 33.333 0.00 0.00 37.00 3.85
2440 2834 8.073768 TCTTCCAATTCAAAGTTGATTACGAAC 58.926 33.333 0.00 0.00 37.00 3.95
2441 2835 7.265647 TCCAATTCAAAGTTGATTACGAACA 57.734 32.000 0.00 0.00 37.00 3.18
2442 2836 7.708051 TCCAATTCAAAGTTGATTACGAACAA 58.292 30.769 0.00 0.00 37.00 2.83
2443 2837 8.191446 TCCAATTCAAAGTTGATTACGAACAAA 58.809 29.630 0.00 0.00 37.00 2.83
2444 2838 8.479280 CCAATTCAAAGTTGATTACGAACAAAG 58.521 33.333 0.00 0.00 37.00 2.77
2445 2839 7.623268 ATTCAAAGTTGATTACGAACAAAGC 57.377 32.000 0.00 0.00 37.00 3.51
2446 2840 5.516090 TCAAAGTTGATTACGAACAAAGCC 58.484 37.500 0.00 0.00 31.01 4.35
2447 2841 5.066634 TCAAAGTTGATTACGAACAAAGCCA 59.933 36.000 0.00 0.00 31.01 4.75
2448 2842 4.749245 AGTTGATTACGAACAAAGCCAG 57.251 40.909 0.00 0.00 0.00 4.85
2449 2843 3.058224 AGTTGATTACGAACAAAGCCAGC 60.058 43.478 0.00 0.00 0.00 4.85
2450 2844 2.499197 TGATTACGAACAAAGCCAGCA 58.501 42.857 0.00 0.00 0.00 4.41
2451 2845 2.483877 TGATTACGAACAAAGCCAGCAG 59.516 45.455 0.00 0.00 0.00 4.24
2452 2846 0.591170 TTACGAACAAAGCCAGCAGC 59.409 50.000 0.00 0.00 44.25 5.25
2461 2855 3.204418 GCCAGCAGCTTCCCATTC 58.796 61.111 0.00 0.00 38.99 2.67
2462 2856 1.679977 GCCAGCAGCTTCCCATTCA 60.680 57.895 0.00 0.00 38.99 2.57
2463 2857 1.941999 GCCAGCAGCTTCCCATTCAC 61.942 60.000 0.00 0.00 38.99 3.18
2464 2858 0.609957 CCAGCAGCTTCCCATTCACA 60.610 55.000 0.00 0.00 0.00 3.58
2465 2859 1.250328 CAGCAGCTTCCCATTCACAA 58.750 50.000 0.00 0.00 0.00 3.33
2466 2860 1.201647 CAGCAGCTTCCCATTCACAAG 59.798 52.381 0.00 0.00 0.00 3.16
2467 2861 0.529378 GCAGCTTCCCATTCACAAGG 59.471 55.000 0.00 0.00 0.00 3.61
2468 2862 0.529378 CAGCTTCCCATTCACAAGGC 59.471 55.000 0.00 0.00 0.00 4.35
2469 2863 0.613012 AGCTTCCCATTCACAAGGCC 60.613 55.000 0.00 0.00 0.00 5.19
2470 2864 0.899717 GCTTCCCATTCACAAGGCCA 60.900 55.000 5.01 0.00 0.00 5.36
2471 2865 1.856629 CTTCCCATTCACAAGGCCAT 58.143 50.000 5.01 0.00 0.00 4.40
2472 2866 1.753073 CTTCCCATTCACAAGGCCATC 59.247 52.381 5.01 0.00 0.00 3.51
2473 2867 1.002069 TCCCATTCACAAGGCCATCT 58.998 50.000 5.01 0.00 0.00 2.90
2474 2868 2.204463 TCCCATTCACAAGGCCATCTA 58.796 47.619 5.01 0.00 0.00 1.98
2475 2869 2.785269 TCCCATTCACAAGGCCATCTAT 59.215 45.455 5.01 0.00 0.00 1.98
2476 2870 3.205056 TCCCATTCACAAGGCCATCTATT 59.795 43.478 5.01 0.00 0.00 1.73
2477 2871 3.571401 CCCATTCACAAGGCCATCTATTC 59.429 47.826 5.01 0.00 0.00 1.75
2478 2872 3.571401 CCATTCACAAGGCCATCTATTCC 59.429 47.826 5.01 0.00 0.00 3.01
2479 2873 2.620251 TCACAAGGCCATCTATTCCG 57.380 50.000 5.01 0.00 0.00 4.30
2480 2874 1.140852 TCACAAGGCCATCTATTCCGG 59.859 52.381 5.01 0.00 0.00 5.14
2481 2875 1.134098 CACAAGGCCATCTATTCCGGT 60.134 52.381 5.01 0.00 0.00 5.28
2482 2876 1.134098 ACAAGGCCATCTATTCCGGTG 60.134 52.381 5.01 0.00 0.00 4.94
2483 2877 0.179018 AAGGCCATCTATTCCGGTGC 60.179 55.000 5.01 0.00 0.00 5.01
2484 2878 1.148273 GGCCATCTATTCCGGTGCA 59.852 57.895 0.00 0.00 0.00 4.57
2485 2879 0.465460 GGCCATCTATTCCGGTGCAA 60.465 55.000 0.00 0.00 0.00 4.08
2486 2880 0.663153 GCCATCTATTCCGGTGCAAC 59.337 55.000 0.00 0.00 0.00 4.17
2487 2881 2.016604 GCCATCTATTCCGGTGCAACA 61.017 52.381 0.98 0.00 39.98 3.33
2488 2882 1.670811 CCATCTATTCCGGTGCAACAC 59.329 52.381 0.98 0.00 39.98 3.32
2489 2883 1.327460 CATCTATTCCGGTGCAACACG 59.673 52.381 0.98 0.53 39.98 4.49
2495 2889 2.590575 CGGTGCAACACGGAGGTT 60.591 61.111 0.98 0.00 39.98 3.50
2496 2890 2.184167 CGGTGCAACACGGAGGTTT 61.184 57.895 0.98 0.00 39.98 3.27
2497 2891 1.358759 GGTGCAACACGGAGGTTTG 59.641 57.895 0.00 0.00 39.98 2.93
2498 2892 1.358759 GTGCAACACGGAGGTTTGG 59.641 57.895 0.00 0.00 36.32 3.28
2499 2893 1.826054 TGCAACACGGAGGTTTGGG 60.826 57.895 0.00 0.00 0.00 4.12
2500 2894 3.039134 CAACACGGAGGTTTGGGC 58.961 61.111 0.00 0.00 0.00 5.36
2501 2895 1.826054 CAACACGGAGGTTTGGGCA 60.826 57.895 0.00 0.00 0.00 5.36
2502 2896 1.152830 AACACGGAGGTTTGGGCAT 59.847 52.632 0.00 0.00 0.00 4.40
2503 2897 0.893727 AACACGGAGGTTTGGGCATC 60.894 55.000 0.00 0.00 0.00 3.91
2504 2898 2.046285 CACGGAGGTTTGGGCATCC 61.046 63.158 0.00 0.00 36.11 3.51
2505 2899 2.231380 ACGGAGGTTTGGGCATCCT 61.231 57.895 0.00 0.00 37.20 3.24
2506 2900 1.750399 CGGAGGTTTGGGCATCCTG 60.750 63.158 0.00 0.00 37.20 3.86
2507 2901 1.691219 GGAGGTTTGGGCATCCTGA 59.309 57.895 0.00 0.00 36.49 3.86
2508 2902 0.039618 GGAGGTTTGGGCATCCTGAA 59.960 55.000 0.00 0.00 36.49 3.02
2509 2903 1.342374 GGAGGTTTGGGCATCCTGAAT 60.342 52.381 0.00 0.00 36.49 2.57
2510 2904 2.027385 GAGGTTTGGGCATCCTGAATC 58.973 52.381 0.00 0.00 0.00 2.52
2511 2905 1.642762 AGGTTTGGGCATCCTGAATCT 59.357 47.619 0.00 0.00 0.00 2.40
2512 2906 1.753073 GGTTTGGGCATCCTGAATCTG 59.247 52.381 0.00 0.00 0.00 2.90
2513 2907 1.753073 GTTTGGGCATCCTGAATCTGG 59.247 52.381 0.00 0.00 0.00 3.86
2514 2908 1.002069 TTGGGCATCCTGAATCTGGT 58.998 50.000 6.07 0.00 0.00 4.00
2515 2909 0.548031 TGGGCATCCTGAATCTGGTC 59.452 55.000 6.07 0.00 0.00 4.02
2516 2910 0.548031 GGGCATCCTGAATCTGGTCA 59.452 55.000 6.07 0.00 0.00 4.02
2517 2911 1.064463 GGGCATCCTGAATCTGGTCAA 60.064 52.381 6.07 0.00 0.00 3.18
2518 2912 2.295885 GGCATCCTGAATCTGGTCAAG 58.704 52.381 6.07 0.00 0.00 3.02
2519 2913 2.356535 GGCATCCTGAATCTGGTCAAGT 60.357 50.000 6.07 0.00 0.00 3.16
2520 2914 3.350833 GCATCCTGAATCTGGTCAAGTT 58.649 45.455 6.07 0.00 0.00 2.66
2521 2915 3.376546 GCATCCTGAATCTGGTCAAGTTC 59.623 47.826 6.07 0.00 0.00 3.01
2522 2916 4.582869 CATCCTGAATCTGGTCAAGTTCA 58.417 43.478 6.07 0.00 0.00 3.18
2523 2917 4.277515 TCCTGAATCTGGTCAAGTTCAG 57.722 45.455 6.07 13.50 40.27 3.02
2524 2918 2.746362 CCTGAATCTGGTCAAGTTCAGC 59.254 50.000 14.38 0.00 39.81 4.26
2525 2919 2.746362 CTGAATCTGGTCAAGTTCAGCC 59.254 50.000 10.13 0.00 37.30 4.85
2526 2920 1.734465 GAATCTGGTCAAGTTCAGCCG 59.266 52.381 0.00 0.00 0.00 5.52
2527 2921 0.687354 ATCTGGTCAAGTTCAGCCGT 59.313 50.000 0.00 0.00 0.00 5.68
2528 2922 0.249868 TCTGGTCAAGTTCAGCCGTG 60.250 55.000 0.00 0.00 0.00 4.94
2529 2923 1.845809 CTGGTCAAGTTCAGCCGTGC 61.846 60.000 0.00 0.00 0.00 5.34
2530 2924 1.598130 GGTCAAGTTCAGCCGTGCT 60.598 57.895 0.00 0.00 40.77 4.40
2531 2925 1.569479 GGTCAAGTTCAGCCGTGCTC 61.569 60.000 0.00 0.00 36.40 4.26
2532 2926 0.601311 GTCAAGTTCAGCCGTGCTCT 60.601 55.000 0.00 0.00 36.40 4.09
2533 2927 0.106708 TCAAGTTCAGCCGTGCTCTT 59.893 50.000 0.00 0.00 36.40 2.85
2534 2928 0.514691 CAAGTTCAGCCGTGCTCTTC 59.485 55.000 0.00 0.00 36.40 2.87
2535 2929 0.946221 AAGTTCAGCCGTGCTCTTCG 60.946 55.000 0.00 0.00 36.40 3.79
2542 2936 2.750815 CCGTGCTCTTCGGTTAAGG 58.249 57.895 0.00 0.00 42.62 2.69
2543 2937 0.037605 CCGTGCTCTTCGGTTAAGGT 60.038 55.000 0.00 0.00 42.62 3.50
2544 2938 1.068474 CGTGCTCTTCGGTTAAGGTG 58.932 55.000 0.00 0.00 35.75 4.00
2545 2939 1.439679 GTGCTCTTCGGTTAAGGTGG 58.560 55.000 0.00 0.00 35.75 4.61
2546 2940 0.321298 TGCTCTTCGGTTAAGGTGGC 60.321 55.000 0.00 0.00 35.75 5.01
2547 2941 0.036294 GCTCTTCGGTTAAGGTGGCT 60.036 55.000 0.00 0.00 35.75 4.75
2548 2942 1.610886 GCTCTTCGGTTAAGGTGGCTT 60.611 52.381 0.00 0.00 35.75 4.35
2549 2943 2.779506 CTCTTCGGTTAAGGTGGCTTT 58.220 47.619 0.00 0.00 35.75 3.51
2550 2944 2.484264 CTCTTCGGTTAAGGTGGCTTTG 59.516 50.000 0.00 0.00 35.75 2.77
2551 2945 1.539827 CTTCGGTTAAGGTGGCTTTGG 59.460 52.381 0.00 0.00 0.00 3.28
2552 2946 0.891904 TCGGTTAAGGTGGCTTTGGC 60.892 55.000 0.00 0.00 37.82 4.52
2553 2947 0.893727 CGGTTAAGGTGGCTTTGGCT 60.894 55.000 0.00 0.00 38.73 4.75
2554 2948 0.888619 GGTTAAGGTGGCTTTGGCTC 59.111 55.000 0.00 0.00 38.73 4.70
2555 2949 0.521735 GTTAAGGTGGCTTTGGCTCG 59.478 55.000 0.00 0.00 38.73 5.03
2556 2950 1.241315 TTAAGGTGGCTTTGGCTCGC 61.241 55.000 0.00 0.00 38.73 5.03
2559 2953 3.741476 GTGGCTTTGGCTCGCCTG 61.741 66.667 9.65 1.14 46.42 4.85
2563 2957 3.437795 CTTTGGCTCGCCTGGCAG 61.438 66.667 20.29 15.51 43.29 4.85
2569 2963 4.711949 CTCGCCTGGCAGCAACCT 62.712 66.667 20.29 0.00 0.00 3.50
2570 2964 4.704833 TCGCCTGGCAGCAACCTC 62.705 66.667 20.29 0.00 0.00 3.85
2574 2968 3.429141 CTGGCAGCAACCTCGCAG 61.429 66.667 0.00 0.00 0.00 5.18
2575 2969 4.254709 TGGCAGCAACCTCGCAGT 62.255 61.111 0.00 0.00 0.00 4.40
2576 2970 3.426568 GGCAGCAACCTCGCAGTC 61.427 66.667 0.00 0.00 0.00 3.51
2577 2971 3.426568 GCAGCAACCTCGCAGTCC 61.427 66.667 0.00 0.00 0.00 3.85
2578 2972 3.114616 CAGCAACCTCGCAGTCCG 61.115 66.667 0.00 0.00 38.61 4.79
2579 2973 3.616721 AGCAACCTCGCAGTCCGT 61.617 61.111 0.00 0.00 38.35 4.69
2580 2974 3.414700 GCAACCTCGCAGTCCGTG 61.415 66.667 0.00 0.00 38.35 4.94
2584 2978 4.436998 CCTCGCAGTCCGTGGGTC 62.437 72.222 0.00 0.00 44.62 4.46
2585 2979 4.778415 CTCGCAGTCCGTGGGTCG 62.778 72.222 0.00 0.00 40.08 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.489990 AGAACAAGTACATGAATCAGATGAAG 57.510 34.615 4.87 0.00 0.00 3.02
1 2 8.853077 AAGAACAAGTACATGAATCAGATGAA 57.147 30.769 4.87 0.00 0.00 2.57
2 3 7.550551 GGAAGAACAAGTACATGAATCAGATGA 59.449 37.037 4.87 0.00 0.00 2.92
3 4 7.551974 AGGAAGAACAAGTACATGAATCAGATG 59.448 37.037 4.87 0.00 0.00 2.90
4 5 7.628234 AGGAAGAACAAGTACATGAATCAGAT 58.372 34.615 4.87 0.00 0.00 2.90
5 6 7.009179 AGGAAGAACAAGTACATGAATCAGA 57.991 36.000 4.87 0.00 0.00 3.27
6 7 8.253810 TCTAGGAAGAACAAGTACATGAATCAG 58.746 37.037 4.87 0.00 0.00 2.90
7 8 8.134202 TCTAGGAAGAACAAGTACATGAATCA 57.866 34.615 4.87 0.00 0.00 2.57
8 9 9.606631 AATCTAGGAAGAACAAGTACATGAATC 57.393 33.333 4.87 3.16 34.73 2.52
17 18 9.793259 TCAACATTTAATCTAGGAAGAACAAGT 57.207 29.630 0.00 0.00 34.73 3.16
27 28 9.956720 GGTTCATGATTCAACATTTAATCTAGG 57.043 33.333 0.00 0.00 34.00 3.02
30 31 8.689972 GGAGGTTCATGATTCAACATTTAATCT 58.310 33.333 0.00 0.00 34.00 2.40
31 32 8.689972 AGGAGGTTCATGATTCAACATTTAATC 58.310 33.333 0.00 0.00 33.57 1.75
32 33 8.599624 AGGAGGTTCATGATTCAACATTTAAT 57.400 30.769 0.00 0.00 0.00 1.40
33 34 7.148255 CGAGGAGGTTCATGATTCAACATTTAA 60.148 37.037 0.00 0.00 0.00 1.52
34 35 6.316140 CGAGGAGGTTCATGATTCAACATTTA 59.684 38.462 0.00 0.00 0.00 1.40
35 36 5.124457 CGAGGAGGTTCATGATTCAACATTT 59.876 40.000 0.00 0.00 0.00 2.32
36 37 4.637534 CGAGGAGGTTCATGATTCAACATT 59.362 41.667 0.00 0.00 0.00 2.71
37 38 4.194640 CGAGGAGGTTCATGATTCAACAT 58.805 43.478 0.00 0.00 0.00 2.71
38 39 3.599343 CGAGGAGGTTCATGATTCAACA 58.401 45.455 0.00 0.00 0.00 3.33
39 40 2.352960 GCGAGGAGGTTCATGATTCAAC 59.647 50.000 0.00 0.00 0.00 3.18
40 41 2.027285 TGCGAGGAGGTTCATGATTCAA 60.027 45.455 0.00 0.00 0.00 2.69
41 42 1.554617 TGCGAGGAGGTTCATGATTCA 59.445 47.619 0.00 0.00 0.00 2.57
42 43 1.936547 GTGCGAGGAGGTTCATGATTC 59.063 52.381 0.00 0.00 0.00 2.52
43 44 1.556911 AGTGCGAGGAGGTTCATGATT 59.443 47.619 0.00 0.00 0.00 2.57
44 45 1.134580 CAGTGCGAGGAGGTTCATGAT 60.135 52.381 0.00 0.00 0.00 2.45
45 46 0.247460 CAGTGCGAGGAGGTTCATGA 59.753 55.000 0.00 0.00 0.00 3.07
46 47 1.364626 GCAGTGCGAGGAGGTTCATG 61.365 60.000 0.00 0.00 0.00 3.07
47 48 1.078848 GCAGTGCGAGGAGGTTCAT 60.079 57.895 0.00 0.00 0.00 2.57
48 49 2.343758 GCAGTGCGAGGAGGTTCA 59.656 61.111 0.00 0.00 0.00 3.18
49 50 1.739562 CTGCAGTGCGAGGAGGTTC 60.740 63.158 11.20 0.00 0.00 3.62
50 51 2.345244 CTGCAGTGCGAGGAGGTT 59.655 61.111 11.20 0.00 0.00 3.50
51 52 3.699894 CCTGCAGTGCGAGGAGGT 61.700 66.667 22.06 0.00 39.50 3.85
53 54 2.433838 CACCTGCAGTGCGAGGAG 60.434 66.667 29.06 21.41 40.28 3.69
61 62 1.587054 GAGCGACTACACCTGCAGT 59.413 57.895 13.81 0.00 0.00 4.40
62 63 1.153745 GGAGCGACTACACCTGCAG 60.154 63.158 6.78 6.78 0.00 4.41
63 64 1.877576 CTGGAGCGACTACACCTGCA 61.878 60.000 0.00 0.00 0.00 4.41
64 65 1.153745 CTGGAGCGACTACACCTGC 60.154 63.158 0.00 0.00 0.00 4.85
65 66 0.888619 TTCTGGAGCGACTACACCTG 59.111 55.000 0.00 0.00 0.00 4.00
66 67 1.178276 CTTCTGGAGCGACTACACCT 58.822 55.000 0.00 0.00 0.00 4.00
67 68 0.458716 GCTTCTGGAGCGACTACACC 60.459 60.000 0.00 0.00 42.46 4.16
68 69 3.037485 GCTTCTGGAGCGACTACAC 57.963 57.895 0.00 0.00 42.46 2.90
77 78 2.015587 GATCCAAGCAAGCTTCTGGAG 58.984 52.381 20.52 2.63 36.67 3.86
78 79 1.632409 AGATCCAAGCAAGCTTCTGGA 59.368 47.619 18.98 18.98 37.36 3.86
79 80 2.125773 AGATCCAAGCAAGCTTCTGG 57.874 50.000 3.97 11.11 33.42 3.86
80 81 3.079578 TGAAGATCCAAGCAAGCTTCTG 58.920 45.455 3.97 0.00 36.73 3.02
81 82 3.080319 GTGAAGATCCAAGCAAGCTTCT 58.920 45.455 3.97 0.00 36.73 2.85
82 83 2.163211 GGTGAAGATCCAAGCAAGCTTC 59.837 50.000 3.97 0.00 36.42 3.86
83 84 2.165998 GGTGAAGATCCAAGCAAGCTT 58.834 47.619 0.59 0.59 36.60 3.74
84 85 1.074405 TGGTGAAGATCCAAGCAAGCT 59.926 47.619 0.00 0.00 31.50 3.74
85 86 1.538047 TGGTGAAGATCCAAGCAAGC 58.462 50.000 0.00 0.00 31.50 4.01
86 87 3.128242 GTGATGGTGAAGATCCAAGCAAG 59.872 47.826 0.00 0.00 38.52 4.01
87 88 3.084039 GTGATGGTGAAGATCCAAGCAA 58.916 45.455 0.00 0.00 38.52 3.91
88 89 2.618816 GGTGATGGTGAAGATCCAAGCA 60.619 50.000 0.00 0.00 38.52 3.91
89 90 2.019984 GGTGATGGTGAAGATCCAAGC 58.980 52.381 0.00 0.00 38.52 4.01
90 91 2.648059 GGGTGATGGTGAAGATCCAAG 58.352 52.381 0.00 0.00 38.52 3.61
91 92 1.284785 GGGGTGATGGTGAAGATCCAA 59.715 52.381 0.00 0.00 38.52 3.53
92 93 0.918983 GGGGTGATGGTGAAGATCCA 59.081 55.000 0.00 0.00 39.41 3.41
93 94 0.183731 GGGGGTGATGGTGAAGATCC 59.816 60.000 0.00 0.00 0.00 3.36
94 95 1.216990 AGGGGGTGATGGTGAAGATC 58.783 55.000 0.00 0.00 0.00 2.75
95 96 1.285962 CAAGGGGGTGATGGTGAAGAT 59.714 52.381 0.00 0.00 0.00 2.40
96 97 0.698238 CAAGGGGGTGATGGTGAAGA 59.302 55.000 0.00 0.00 0.00 2.87
97 98 0.967380 GCAAGGGGGTGATGGTGAAG 60.967 60.000 0.00 0.00 0.00 3.02
98 99 1.076549 GCAAGGGGGTGATGGTGAA 59.923 57.895 0.00 0.00 0.00 3.18
99 100 2.763215 GCAAGGGGGTGATGGTGA 59.237 61.111 0.00 0.00 0.00 4.02
100 101 2.751436 CGCAAGGGGGTGATGGTG 60.751 66.667 0.00 0.00 0.00 4.17
101 102 2.075355 TTTCGCAAGGGGGTGATGGT 62.075 55.000 0.00 0.00 38.47 3.55
102 103 1.304052 TTTCGCAAGGGGGTGATGG 60.304 57.895 0.00 0.00 38.47 3.51
103 104 0.322456 TCTTTCGCAAGGGGGTGATG 60.322 55.000 0.00 0.00 38.47 3.07
104 105 0.035056 CTCTTTCGCAAGGGGGTGAT 60.035 55.000 0.00 0.00 38.47 3.06
105 106 1.125093 TCTCTTTCGCAAGGGGGTGA 61.125 55.000 0.00 0.00 30.32 4.02
106 107 0.250727 TTCTCTTTCGCAAGGGGGTG 60.251 55.000 0.00 0.00 30.32 4.61
107 108 0.250770 GTTCTCTTTCGCAAGGGGGT 60.251 55.000 0.00 0.00 30.32 4.95
108 109 0.960861 GGTTCTCTTTCGCAAGGGGG 60.961 60.000 0.00 0.00 30.32 5.40
109 110 0.960861 GGGTTCTCTTTCGCAAGGGG 60.961 60.000 0.00 0.00 30.32 4.79
110 111 0.036875 AGGGTTCTCTTTCGCAAGGG 59.963 55.000 0.00 0.00 38.47 3.95
111 112 1.443802 GAGGGTTCTCTTTCGCAAGG 58.556 55.000 0.00 0.00 37.07 3.61
112 113 1.071605 CGAGGGTTCTCTTTCGCAAG 58.928 55.000 0.00 0.00 37.86 4.01
113 114 0.320421 CCGAGGGTTCTCTTTCGCAA 60.320 55.000 0.00 0.00 37.86 4.85
114 115 1.292223 CCGAGGGTTCTCTTTCGCA 59.708 57.895 0.00 0.00 37.86 5.10
131 132 2.166664 AGAAGTCACATCGAGCCTAACC 59.833 50.000 0.00 0.00 0.00 2.85
134 135 2.723273 TGAGAAGTCACATCGAGCCTA 58.277 47.619 0.00 0.00 0.00 3.93
135 136 1.550327 TGAGAAGTCACATCGAGCCT 58.450 50.000 0.00 0.00 0.00 4.58
142 143 5.495926 AGATCCTGTTTGAGAAGTCACAT 57.504 39.130 0.00 0.00 30.10 3.21
151 152 4.882427 AGATGCATCAAGATCCTGTTTGAG 59.118 41.667 27.81 0.00 36.81 3.02
154 155 4.643784 GGAAGATGCATCAAGATCCTGTTT 59.356 41.667 27.81 9.62 0.00 2.83
159 160 5.587388 TTTTGGAAGATGCATCAAGATCC 57.413 39.130 27.81 25.09 0.00 3.36
179 180 6.859017 ACTTGAACGACCTACATTTGTTTTT 58.141 32.000 0.00 0.00 0.00 1.94
188 189 2.033372 TGGTGACTTGAACGACCTACA 58.967 47.619 0.00 0.00 0.00 2.74
189 190 2.798847 GTTGGTGACTTGAACGACCTAC 59.201 50.000 0.00 0.00 0.00 3.18
219 220 0.615850 CTTCCTTGGTGGTCCCTCTC 59.384 60.000 0.00 0.00 37.07 3.20
230 231 4.115199 CGCCCCTCCCTTCCTTGG 62.115 72.222 0.00 0.00 0.00 3.61
231 232 4.115199 CCGCCCCTCCCTTCCTTG 62.115 72.222 0.00 0.00 0.00 3.61
240 242 2.156051 CTAATCCTACGCCGCCCCTC 62.156 65.000 0.00 0.00 0.00 4.30
248 250 1.177256 TCCTCGCCCTAATCCTACGC 61.177 60.000 0.00 0.00 0.00 4.42
249 251 0.597072 GTCCTCGCCCTAATCCTACG 59.403 60.000 0.00 0.00 0.00 3.51
250 252 1.700955 TGTCCTCGCCCTAATCCTAC 58.299 55.000 0.00 0.00 0.00 3.18
263 265 3.195661 GGTTACATCCGTTCATGTCCTC 58.804 50.000 0.00 0.00 38.07 3.71
275 277 4.311816 TCCTTTATCGTCGGTTACATCC 57.688 45.455 0.00 0.00 0.00 3.51
283 285 1.149964 GCGGGTTCCTTTATCGTCGG 61.150 60.000 0.00 0.00 0.00 4.79
317 319 3.955551 CAACCTAGGGTTCTCTACTCCTC 59.044 52.174 14.81 0.00 43.05 3.71
322 324 3.700539 GGTCTCAACCTAGGGTTCTCTAC 59.299 52.174 14.81 0.00 43.05 2.59
334 336 6.447084 TGAATATTTTCCTAGGGTCTCAACCT 59.553 38.462 9.46 0.00 45.66 3.50
336 338 8.753497 AATGAATATTTTCCTAGGGTCTCAAC 57.247 34.615 9.46 0.00 0.00 3.18
337 339 8.556589 TGAATGAATATTTTCCTAGGGTCTCAA 58.443 33.333 9.46 0.00 0.00 3.02
338 340 8.101309 TGAATGAATATTTTCCTAGGGTCTCA 57.899 34.615 9.46 3.30 0.00 3.27
381 384 3.350833 AGAATCAACTGGGATGCTGAAC 58.649 45.455 0.00 0.00 31.71 3.18
388 391 3.790408 AGATGGGAAGAATCAACTGGGAT 59.210 43.478 0.00 0.00 0.00 3.85
396 399 2.594536 AGGGGAGATGGGAAGAATCA 57.405 50.000 0.00 0.00 0.00 2.57
444 447 0.801836 CTTTAGCATTTTGGCCGCGG 60.802 55.000 24.05 24.05 0.00 6.46
445 448 0.109319 ACTTTAGCATTTTGGCCGCG 60.109 50.000 0.00 0.00 0.00 6.46
446 449 1.349234 CACTTTAGCATTTTGGCCGC 58.651 50.000 0.00 0.00 0.00 6.53
448 451 3.401033 AACCACTTTAGCATTTTGGCC 57.599 42.857 0.00 0.00 0.00 5.36
450 453 5.463061 CACTGAAACCACTTTAGCATTTTGG 59.537 40.000 0.00 0.00 0.00 3.28
451 454 5.050837 GCACTGAAACCACTTTAGCATTTTG 60.051 40.000 0.00 0.00 0.00 2.44
453 456 4.620982 GCACTGAAACCACTTTAGCATTT 58.379 39.130 0.00 0.00 0.00 2.32
454 457 3.304659 CGCACTGAAACCACTTTAGCATT 60.305 43.478 0.00 0.00 0.00 3.56
455 458 2.226437 CGCACTGAAACCACTTTAGCAT 59.774 45.455 0.00 0.00 0.00 3.79
456 459 1.601903 CGCACTGAAACCACTTTAGCA 59.398 47.619 0.00 0.00 0.00 3.49
457 460 1.602377 ACGCACTGAAACCACTTTAGC 59.398 47.619 0.00 0.00 0.00 3.09
458 461 4.150098 GTCTACGCACTGAAACCACTTTAG 59.850 45.833 0.00 0.00 0.00 1.85
460 463 2.870411 GTCTACGCACTGAAACCACTTT 59.130 45.455 0.00 0.00 0.00 2.66
461 464 2.480845 GTCTACGCACTGAAACCACTT 58.519 47.619 0.00 0.00 0.00 3.16
462 465 1.270147 GGTCTACGCACTGAAACCACT 60.270 52.381 0.00 0.00 0.00 4.00
463 466 1.145803 GGTCTACGCACTGAAACCAC 58.854 55.000 0.00 0.00 0.00 4.16
466 469 2.442084 CGGGTCTACGCACTGAAAC 58.558 57.895 0.00 0.00 0.00 2.78
475 861 2.126228 TTTCGCAGCGGGTCTACG 60.126 61.111 16.42 0.00 32.93 3.51
541 927 9.811995 TTGCACTACTAGTCGTATCATATTTTT 57.188 29.630 0.00 0.00 0.00 1.94
542 928 9.982651 ATTGCACTACTAGTCGTATCATATTTT 57.017 29.630 0.00 0.00 0.00 1.82
543 929 9.982651 AATTGCACTACTAGTCGTATCATATTT 57.017 29.630 0.00 0.00 0.00 1.40
576 966 7.283127 AGTTGTGTCATGTCAATTTGTAGAGTT 59.717 33.333 0.00 0.00 0.00 3.01
589 979 2.472695 TGGGCTAGTTGTGTCATGTC 57.527 50.000 0.00 0.00 0.00 3.06
600 990 4.262894 CCGACCATATATGTTTGGGCTAGT 60.263 45.833 11.73 0.00 39.02 2.57
604 994 2.552315 CACCGACCATATATGTTTGGGC 59.448 50.000 18.21 3.91 37.70 5.36
605 995 3.813166 GTCACCGACCATATATGTTTGGG 59.187 47.826 18.21 13.73 37.32 4.12
606 996 4.703897 AGTCACCGACCATATATGTTTGG 58.296 43.478 13.67 13.67 39.02 3.28
607 997 6.200286 GTGTAGTCACCGACCATATATGTTTG 59.800 42.308 11.73 1.31 38.51 2.93
608 998 6.127281 TGTGTAGTCACCGACCATATATGTTT 60.127 38.462 11.73 0.00 43.26 2.83
610 1000 4.891168 TGTGTAGTCACCGACCATATATGT 59.109 41.667 11.73 0.18 43.26 2.29
611 1001 5.447624 TGTGTAGTCACCGACCATATATG 57.552 43.478 5.68 5.68 43.26 1.78
612 1002 7.956328 ATATGTGTAGTCACCGACCATATAT 57.044 36.000 0.00 0.00 43.26 0.86
613 1003 8.105197 AGTATATGTGTAGTCACCGACCATATA 58.895 37.037 0.00 0.00 43.26 0.86
614 1004 6.946583 AGTATATGTGTAGTCACCGACCATAT 59.053 38.462 0.00 0.00 43.26 1.78
615 1005 6.301486 AGTATATGTGTAGTCACCGACCATA 58.699 40.000 0.00 0.00 43.26 2.74
616 1006 5.138276 AGTATATGTGTAGTCACCGACCAT 58.862 41.667 0.00 0.00 43.26 3.55
617 1007 4.529897 AGTATATGTGTAGTCACCGACCA 58.470 43.478 0.00 0.00 43.26 4.02
618 1008 6.814506 ATAGTATATGTGTAGTCACCGACC 57.185 41.667 0.00 0.00 43.26 4.79
619 1009 9.985318 GATAATAGTATATGTGTAGTCACCGAC 57.015 37.037 0.00 0.00 43.26 4.79
620 1010 9.729281 TGATAATAGTATATGTGTAGTCACCGA 57.271 33.333 0.00 0.00 43.26 4.69
680 1070 2.500229 TCGGAATGGTTCTTGTTGACC 58.500 47.619 0.00 0.00 0.00 4.02
713 1103 2.512515 GAGCACTCATGGACCCGC 60.513 66.667 0.00 0.00 0.00 6.13
716 1106 1.142748 CTCGGAGCACTCATGGACC 59.857 63.158 0.00 0.00 0.00 4.46
782 1172 7.792032 TCAGTAATCTATCCATTTTTCTCGGT 58.208 34.615 0.00 0.00 0.00 4.69
787 1177 6.207614 GGGGCTCAGTAATCTATCCATTTTTC 59.792 42.308 0.00 0.00 0.00 2.29
790 1180 4.916424 AGGGGCTCAGTAATCTATCCATTT 59.084 41.667 0.00 0.00 0.00 2.32
904 1294 2.232298 GAGCGTGGTGAGGAGGAAGG 62.232 65.000 0.00 0.00 0.00 3.46
916 1306 2.106683 GGTGAATTCCCGAGCGTGG 61.107 63.158 2.27 0.00 0.00 4.94
996 1388 2.125106 GTGGCGGTCTCCATGGAC 60.125 66.667 11.44 2.07 38.57 4.02
1686 2078 3.423571 ACGAGATACAAGAAACTACGCG 58.576 45.455 3.53 3.53 0.00 6.01
1717 2109 8.236586 CAGCAGTAATACACAAAAAGATAGCAA 58.763 33.333 0.00 0.00 0.00 3.91
1741 2133 8.175069 ACATTGTAGATTGCACGTATTAAACAG 58.825 33.333 0.00 0.00 0.00 3.16
1837 2229 5.525378 CCTAGTCGATCAAAAGCAGCTAATT 59.475 40.000 0.00 0.00 0.00 1.40
1915 2307 0.603569 TCTGGGACTCTTCGCTTGAC 59.396 55.000 0.00 0.00 35.68 3.18
1918 2310 3.019799 TCTATCTGGGACTCTTCGCTT 57.980 47.619 0.00 0.00 35.68 4.68
1941 2333 6.039270 ACAGAATTTGAACGAACTCAATTCCA 59.961 34.615 0.00 0.00 35.31 3.53
1953 2345 4.752101 ACTCTCCAGAACAGAATTTGAACG 59.248 41.667 0.00 0.00 0.00 3.95
1971 2363 0.109689 ACTAACACGCGCTGACTCTC 60.110 55.000 5.73 0.00 0.00 3.20
1979 2371 3.887069 TTATTACGAACTAACACGCGC 57.113 42.857 5.73 0.00 0.00 6.86
2031 2423 2.026822 AGAACATCGCAGATTTCCAGGT 60.027 45.455 0.00 0.00 45.12 4.00
2033 2425 3.181503 CCAAGAACATCGCAGATTTCCAG 60.182 47.826 0.00 0.00 45.12 3.86
2042 2434 1.228398 TTGGGCCAAGAACATCGCA 60.228 52.632 16.66 0.00 0.00 5.10
2154 2546 4.570663 GTGCCCGTCTCCGATCCG 62.571 72.222 0.00 0.00 35.63 4.18
2155 2547 4.570663 CGTGCCCGTCTCCGATCC 62.571 72.222 0.00 0.00 35.63 3.36
2230 2624 3.207669 CCAGCTGCCGGAGATTGC 61.208 66.667 5.05 0.37 0.00 3.56
2278 2672 2.823924 TCAGACAAAATCGACCCGAA 57.176 45.000 0.00 0.00 39.99 4.30
2282 2676 6.798959 CAGAAGAAATTCAGACAAAATCGACC 59.201 38.462 0.00 0.00 0.00 4.79
2283 2677 6.304208 GCAGAAGAAATTCAGACAAAATCGAC 59.696 38.462 0.00 0.00 0.00 4.20
2284 2678 6.205464 AGCAGAAGAAATTCAGACAAAATCGA 59.795 34.615 0.00 0.00 0.00 3.59
2285 2679 6.376978 AGCAGAAGAAATTCAGACAAAATCG 58.623 36.000 0.00 0.00 0.00 3.34
2286 2680 7.359014 GCAAGCAGAAGAAATTCAGACAAAATC 60.359 37.037 0.00 0.00 0.00 2.17
2287 2681 6.423001 GCAAGCAGAAGAAATTCAGACAAAAT 59.577 34.615 0.00 0.00 0.00 1.82
2288 2682 5.750067 GCAAGCAGAAGAAATTCAGACAAAA 59.250 36.000 0.00 0.00 0.00 2.44
2289 2683 5.068198 AGCAAGCAGAAGAAATTCAGACAAA 59.932 36.000 0.00 0.00 0.00 2.83
2290 2684 4.581824 AGCAAGCAGAAGAAATTCAGACAA 59.418 37.500 0.00 0.00 0.00 3.18
2291 2685 4.139786 AGCAAGCAGAAGAAATTCAGACA 58.860 39.130 0.00 0.00 0.00 3.41
2292 2686 4.668686 CGAGCAAGCAGAAGAAATTCAGAC 60.669 45.833 0.00 0.00 0.00 3.51
2293 2687 3.434641 CGAGCAAGCAGAAGAAATTCAGA 59.565 43.478 0.00 0.00 0.00 3.27
2294 2688 3.434641 TCGAGCAAGCAGAAGAAATTCAG 59.565 43.478 0.00 0.00 0.00 3.02
2295 2689 3.402110 TCGAGCAAGCAGAAGAAATTCA 58.598 40.909 0.00 0.00 0.00 2.57
2296 2690 4.612932 ATCGAGCAAGCAGAAGAAATTC 57.387 40.909 0.00 0.00 0.00 2.17
2297 2691 5.382618 AAATCGAGCAAGCAGAAGAAATT 57.617 34.783 0.00 0.00 0.00 1.82
2298 2692 5.382618 AAAATCGAGCAAGCAGAAGAAAT 57.617 34.783 0.00 0.00 0.00 2.17
2299 2693 4.836125 AAAATCGAGCAAGCAGAAGAAA 57.164 36.364 0.00 0.00 0.00 2.52
2300 2694 4.836125 AAAAATCGAGCAAGCAGAAGAA 57.164 36.364 0.00 0.00 0.00 2.52
2318 2712 2.379972 ACGATTGTCACCACCCAAAAA 58.620 42.857 0.00 0.00 0.00 1.94
2319 2713 2.060050 ACGATTGTCACCACCCAAAA 57.940 45.000 0.00 0.00 0.00 2.44
2320 2714 2.060050 AACGATTGTCACCACCCAAA 57.940 45.000 0.00 0.00 0.00 3.28
2321 2715 2.060050 AAACGATTGTCACCACCCAA 57.940 45.000 0.00 0.00 0.00 4.12
2322 2716 2.496111 GTAAACGATTGTCACCACCCA 58.504 47.619 0.00 0.00 0.00 4.51
2323 2717 1.808343 GGTAAACGATTGTCACCACCC 59.192 52.381 10.62 0.00 0.00 4.61
2336 2730 0.162294 GAACAACGCTCCGGTAAACG 59.838 55.000 0.00 3.86 43.80 3.60
2337 2731 1.193874 CTGAACAACGCTCCGGTAAAC 59.806 52.381 0.00 0.00 0.00 2.01
2338 2732 1.202557 ACTGAACAACGCTCCGGTAAA 60.203 47.619 0.00 0.00 0.00 2.01
2339 2733 0.390124 ACTGAACAACGCTCCGGTAA 59.610 50.000 0.00 0.00 0.00 2.85
2340 2734 1.246649 TACTGAACAACGCTCCGGTA 58.753 50.000 0.00 0.00 0.00 4.02
2341 2735 0.390124 TTACTGAACAACGCTCCGGT 59.610 50.000 0.00 0.00 0.00 5.28
2342 2736 1.068474 CTTACTGAACAACGCTCCGG 58.932 55.000 0.00 0.00 0.00 5.14
2343 2737 0.438830 GCTTACTGAACAACGCTCCG 59.561 55.000 0.00 0.00 0.00 4.63
2344 2738 0.438830 CGCTTACTGAACAACGCTCC 59.561 55.000 0.00 0.00 0.00 4.70
2345 2739 1.387084 CTCGCTTACTGAACAACGCTC 59.613 52.381 0.00 0.00 0.00 5.03
2346 2740 1.419374 CTCGCTTACTGAACAACGCT 58.581 50.000 0.00 0.00 0.00 5.07
2347 2741 0.179248 GCTCGCTTACTGAACAACGC 60.179 55.000 0.00 0.00 0.00 4.84
2348 2742 1.419374 AGCTCGCTTACTGAACAACG 58.581 50.000 0.00 0.00 0.00 4.10
2349 2743 4.235360 TCTTAGCTCGCTTACTGAACAAC 58.765 43.478 0.00 0.00 0.00 3.32
2350 2744 4.514781 TCTTAGCTCGCTTACTGAACAA 57.485 40.909 0.00 0.00 0.00 2.83
2351 2745 4.424626 CATCTTAGCTCGCTTACTGAACA 58.575 43.478 0.00 0.00 0.00 3.18
2352 2746 3.799420 CCATCTTAGCTCGCTTACTGAAC 59.201 47.826 0.00 0.00 0.00 3.18
2353 2747 3.738281 GCCATCTTAGCTCGCTTACTGAA 60.738 47.826 0.00 0.00 0.00 3.02
2354 2748 2.223829 GCCATCTTAGCTCGCTTACTGA 60.224 50.000 0.00 0.00 0.00 3.41
2355 2749 2.131183 GCCATCTTAGCTCGCTTACTG 58.869 52.381 0.00 0.00 0.00 2.74
2356 2750 1.757118 TGCCATCTTAGCTCGCTTACT 59.243 47.619 0.00 0.00 0.00 2.24
2357 2751 2.131183 CTGCCATCTTAGCTCGCTTAC 58.869 52.381 0.00 0.00 0.00 2.34
2358 2752 2.031870 TCTGCCATCTTAGCTCGCTTA 58.968 47.619 0.00 0.00 0.00 3.09
2359 2753 0.826715 TCTGCCATCTTAGCTCGCTT 59.173 50.000 0.00 0.00 0.00 4.68
2360 2754 0.388659 CTCTGCCATCTTAGCTCGCT 59.611 55.000 0.00 0.00 0.00 4.93
2361 2755 1.220817 GCTCTGCCATCTTAGCTCGC 61.221 60.000 0.00 0.00 32.18 5.03
2362 2756 2.897780 GCTCTGCCATCTTAGCTCG 58.102 57.895 0.00 0.00 32.18 5.03
2382 2776 2.687566 ATGGTGGTCCCCGTCTCC 60.688 66.667 0.00 0.00 0.00 3.71
2383 2777 2.901042 GATGGTGGTCCCCGTCTC 59.099 66.667 10.05 0.00 37.51 3.36
2384 2778 3.075005 CGATGGTGGTCCCCGTCT 61.075 66.667 13.66 0.00 38.21 4.18
2385 2779 3.387947 ACGATGGTGGTCCCCGTC 61.388 66.667 8.03 8.03 37.41 4.79
2386 2780 3.702048 CACGATGGTGGTCCCCGT 61.702 66.667 0.00 0.00 40.58 5.28
2394 2788 1.134401 ACATAAGAGGCCACGATGGTG 60.134 52.381 17.80 0.03 40.46 4.17
2395 2789 1.139058 GACATAAGAGGCCACGATGGT 59.861 52.381 17.80 6.67 40.46 3.55
2396 2790 1.414181 AGACATAAGAGGCCACGATGG 59.586 52.381 17.80 0.00 41.55 3.51
2397 2791 2.898729 AGACATAAGAGGCCACGATG 57.101 50.000 5.01 10.92 0.00 3.84
2398 2792 2.103263 GGAAGACATAAGAGGCCACGAT 59.897 50.000 5.01 0.00 0.00 3.73
2399 2793 1.480954 GGAAGACATAAGAGGCCACGA 59.519 52.381 5.01 0.00 0.00 4.35
2400 2794 1.207089 TGGAAGACATAAGAGGCCACG 59.793 52.381 5.01 0.00 0.00 4.94
2401 2795 3.350219 TTGGAAGACATAAGAGGCCAC 57.650 47.619 5.01 0.00 0.00 5.01
2402 2796 4.018506 TGAATTGGAAGACATAAGAGGCCA 60.019 41.667 5.01 0.00 0.00 5.36
2403 2797 4.526970 TGAATTGGAAGACATAAGAGGCC 58.473 43.478 0.00 0.00 0.00 5.19
2404 2798 6.151817 ACTTTGAATTGGAAGACATAAGAGGC 59.848 38.462 4.81 0.00 0.00 4.70
2405 2799 7.693969 ACTTTGAATTGGAAGACATAAGAGG 57.306 36.000 4.81 0.00 0.00 3.69
2406 2800 8.786898 TCAACTTTGAATTGGAAGACATAAGAG 58.213 33.333 4.81 0.00 33.55 2.85
2407 2801 8.690203 TCAACTTTGAATTGGAAGACATAAGA 57.310 30.769 4.81 0.00 33.55 2.10
2408 2802 9.918630 AATCAACTTTGAATTGGAAGACATAAG 57.081 29.630 0.00 0.00 41.13 1.73
2411 2805 8.023128 CGTAATCAACTTTGAATTGGAAGACAT 58.977 33.333 0.00 0.00 41.13 3.06
2412 2806 7.227711 TCGTAATCAACTTTGAATTGGAAGACA 59.772 33.333 0.00 0.00 41.13 3.41
2413 2807 7.581476 TCGTAATCAACTTTGAATTGGAAGAC 58.419 34.615 0.00 0.00 41.13 3.01
2414 2808 7.737972 TCGTAATCAACTTTGAATTGGAAGA 57.262 32.000 0.00 0.00 41.13 2.87
2415 2809 7.860373 TGTTCGTAATCAACTTTGAATTGGAAG 59.140 33.333 0.00 0.00 41.13 3.46
2416 2810 7.708051 TGTTCGTAATCAACTTTGAATTGGAA 58.292 30.769 0.00 0.00 41.13 3.53
2417 2811 7.265647 TGTTCGTAATCAACTTTGAATTGGA 57.734 32.000 0.00 0.00 41.13 3.53
2418 2812 7.922505 TTGTTCGTAATCAACTTTGAATTGG 57.077 32.000 0.00 0.00 41.13 3.16
2419 2813 7.998212 GCTTTGTTCGTAATCAACTTTGAATTG 59.002 33.333 0.00 0.00 41.13 2.32
2420 2814 7.169140 GGCTTTGTTCGTAATCAACTTTGAATT 59.831 33.333 0.00 0.00 41.13 2.17
2421 2815 6.640907 GGCTTTGTTCGTAATCAACTTTGAAT 59.359 34.615 0.00 0.00 41.13 2.57
2422 2816 5.974751 GGCTTTGTTCGTAATCAACTTTGAA 59.025 36.000 0.00 0.00 41.13 2.69
2423 2817 5.066634 TGGCTTTGTTCGTAATCAACTTTGA 59.933 36.000 0.00 0.00 42.14 2.69
2424 2818 5.277825 TGGCTTTGTTCGTAATCAACTTTG 58.722 37.500 0.00 0.00 0.00 2.77
2425 2819 5.508200 TGGCTTTGTTCGTAATCAACTTT 57.492 34.783 0.00 0.00 0.00 2.66
2426 2820 4.556699 GCTGGCTTTGTTCGTAATCAACTT 60.557 41.667 0.00 0.00 0.00 2.66
2427 2821 3.058224 GCTGGCTTTGTTCGTAATCAACT 60.058 43.478 0.00 0.00 0.00 3.16
2428 2822 3.234386 GCTGGCTTTGTTCGTAATCAAC 58.766 45.455 0.00 0.00 0.00 3.18
2429 2823 2.881513 TGCTGGCTTTGTTCGTAATCAA 59.118 40.909 0.00 0.00 0.00 2.57
2430 2824 2.483877 CTGCTGGCTTTGTTCGTAATCA 59.516 45.455 0.00 0.00 0.00 2.57
2431 2825 2.729156 GCTGCTGGCTTTGTTCGTAATC 60.729 50.000 0.00 0.00 38.06 1.75
2432 2826 1.200020 GCTGCTGGCTTTGTTCGTAAT 59.800 47.619 0.00 0.00 38.06 1.89
2433 2827 0.591170 GCTGCTGGCTTTGTTCGTAA 59.409 50.000 0.00 0.00 38.06 3.18
2434 2828 2.244000 GCTGCTGGCTTTGTTCGTA 58.756 52.632 0.00 0.00 38.06 3.43
2435 2829 3.034030 GCTGCTGGCTTTGTTCGT 58.966 55.556 0.00 0.00 38.06 3.85
2444 2838 1.679977 TGAATGGGAAGCTGCTGGC 60.680 57.895 1.35 0.00 42.19 4.85
2445 2839 0.609957 TGTGAATGGGAAGCTGCTGG 60.610 55.000 1.35 0.00 0.00 4.85
2446 2840 1.201647 CTTGTGAATGGGAAGCTGCTG 59.798 52.381 1.35 0.00 0.00 4.41
2447 2841 1.542492 CTTGTGAATGGGAAGCTGCT 58.458 50.000 0.00 0.00 0.00 4.24
2448 2842 0.529378 CCTTGTGAATGGGAAGCTGC 59.471 55.000 0.00 0.00 0.00 5.25
2449 2843 0.529378 GCCTTGTGAATGGGAAGCTG 59.471 55.000 0.00 0.00 0.00 4.24
2450 2844 0.613012 GGCCTTGTGAATGGGAAGCT 60.613 55.000 0.00 0.00 0.00 3.74
2451 2845 0.899717 TGGCCTTGTGAATGGGAAGC 60.900 55.000 3.32 0.00 0.00 3.86
2452 2846 1.753073 GATGGCCTTGTGAATGGGAAG 59.247 52.381 3.32 0.00 0.00 3.46
2453 2847 1.358787 AGATGGCCTTGTGAATGGGAA 59.641 47.619 3.32 0.00 0.00 3.97
2454 2848 1.002069 AGATGGCCTTGTGAATGGGA 58.998 50.000 3.32 0.00 0.00 4.37
2455 2849 2.734755 TAGATGGCCTTGTGAATGGG 57.265 50.000 3.32 0.00 0.00 4.00
2456 2850 3.571401 GGAATAGATGGCCTTGTGAATGG 59.429 47.826 3.32 0.00 0.00 3.16
2457 2851 3.251729 CGGAATAGATGGCCTTGTGAATG 59.748 47.826 3.32 0.00 0.00 2.67
2458 2852 3.480470 CGGAATAGATGGCCTTGTGAAT 58.520 45.455 3.32 0.00 0.00 2.57
2459 2853 2.421388 CCGGAATAGATGGCCTTGTGAA 60.421 50.000 3.32 0.00 0.00 3.18
2460 2854 1.140852 CCGGAATAGATGGCCTTGTGA 59.859 52.381 3.32 0.00 0.00 3.58
2461 2855 1.134098 ACCGGAATAGATGGCCTTGTG 60.134 52.381 9.46 0.00 0.00 3.33
2462 2856 1.134098 CACCGGAATAGATGGCCTTGT 60.134 52.381 9.46 0.00 0.00 3.16
2463 2857 1.597742 CACCGGAATAGATGGCCTTG 58.402 55.000 9.46 0.00 0.00 3.61
2464 2858 0.179018 GCACCGGAATAGATGGCCTT 60.179 55.000 9.46 0.00 0.00 4.35
2465 2859 1.344953 TGCACCGGAATAGATGGCCT 61.345 55.000 9.46 0.00 0.00 5.19
2466 2860 0.465460 TTGCACCGGAATAGATGGCC 60.465 55.000 9.46 0.00 0.00 5.36
2467 2861 0.663153 GTTGCACCGGAATAGATGGC 59.337 55.000 9.46 0.00 0.00 4.40
2468 2862 1.670811 GTGTTGCACCGGAATAGATGG 59.329 52.381 9.46 0.00 0.00 3.51
2469 2863 1.327460 CGTGTTGCACCGGAATAGATG 59.673 52.381 9.46 0.00 0.00 2.90
2470 2864 1.651987 CGTGTTGCACCGGAATAGAT 58.348 50.000 9.46 0.00 0.00 1.98
2471 2865 0.390603 CCGTGTTGCACCGGAATAGA 60.391 55.000 9.46 0.00 32.71 1.98
2472 2866 0.390603 TCCGTGTTGCACCGGAATAG 60.391 55.000 9.46 0.00 35.45 1.73
2473 2867 0.390603 CTCCGTGTTGCACCGGAATA 60.391 55.000 18.62 0.00 36.93 1.75
2474 2868 1.671054 CTCCGTGTTGCACCGGAAT 60.671 57.895 18.62 0.00 36.93 3.01
2475 2869 2.280524 CTCCGTGTTGCACCGGAA 60.281 61.111 18.62 0.00 36.93 4.30
2476 2870 4.308458 CCTCCGTGTTGCACCGGA 62.308 66.667 9.46 17.49 36.35 5.14
2477 2871 4.619227 ACCTCCGTGTTGCACCGG 62.619 66.667 11.42 11.42 32.42 5.28
2478 2872 2.184167 AAACCTCCGTGTTGCACCG 61.184 57.895 0.00 0.00 0.00 4.94
2479 2873 1.358759 CAAACCTCCGTGTTGCACC 59.641 57.895 0.00 0.00 0.00 5.01
2480 2874 1.358759 CCAAACCTCCGTGTTGCAC 59.641 57.895 0.00 0.00 0.00 4.57
2481 2875 1.826054 CCCAAACCTCCGTGTTGCA 60.826 57.895 0.00 0.00 0.00 4.08
2482 2876 3.039134 CCCAAACCTCCGTGTTGC 58.961 61.111 0.00 0.00 0.00 4.17
2483 2877 1.178534 ATGCCCAAACCTCCGTGTTG 61.179 55.000 0.00 0.00 0.00 3.33
2484 2878 0.893727 GATGCCCAAACCTCCGTGTT 60.894 55.000 0.00 0.00 0.00 3.32
2485 2879 1.303317 GATGCCCAAACCTCCGTGT 60.303 57.895 0.00 0.00 0.00 4.49
2486 2880 2.046285 GGATGCCCAAACCTCCGTG 61.046 63.158 0.00 0.00 0.00 4.94
2487 2881 2.231380 AGGATGCCCAAACCTCCGT 61.231 57.895 0.00 0.00 32.87 4.69
2488 2882 1.750399 CAGGATGCCCAAACCTCCG 60.750 63.158 0.00 0.00 32.87 4.63
2489 2883 0.039618 TTCAGGATGCCCAAACCTCC 59.960 55.000 0.00 0.00 34.76 4.30
2490 2884 2.027385 GATTCAGGATGCCCAAACCTC 58.973 52.381 0.00 0.00 34.76 3.85
2491 2885 1.642762 AGATTCAGGATGCCCAAACCT 59.357 47.619 0.00 0.00 34.76 3.50
2492 2886 1.753073 CAGATTCAGGATGCCCAAACC 59.247 52.381 0.00 0.00 34.76 3.27
2493 2887 1.753073 CCAGATTCAGGATGCCCAAAC 59.247 52.381 0.00 0.00 34.76 2.93
2494 2888 1.358787 ACCAGATTCAGGATGCCCAAA 59.641 47.619 1.57 0.00 34.76 3.28
2495 2889 1.002069 ACCAGATTCAGGATGCCCAA 58.998 50.000 1.57 0.00 34.76 4.12
2496 2890 0.548031 GACCAGATTCAGGATGCCCA 59.452 55.000 1.57 0.00 34.76 5.36
2497 2891 0.548031 TGACCAGATTCAGGATGCCC 59.452 55.000 1.57 0.00 34.76 5.36
2498 2892 2.295885 CTTGACCAGATTCAGGATGCC 58.704 52.381 1.57 0.00 34.76 4.40
2499 2893 2.996631 ACTTGACCAGATTCAGGATGC 58.003 47.619 1.57 0.00 34.76 3.91
2500 2894 4.582869 TGAACTTGACCAGATTCAGGATG 58.417 43.478 1.57 0.00 37.54 3.51
2501 2895 4.841422 CTGAACTTGACCAGATTCAGGAT 58.159 43.478 1.57 0.00 42.79 3.24
2502 2896 3.557898 GCTGAACTTGACCAGATTCAGGA 60.558 47.826 18.62 0.00 45.35 3.86
2503 2897 2.746362 GCTGAACTTGACCAGATTCAGG 59.254 50.000 18.62 0.00 45.35 3.86
2505 2899 2.783135 GGCTGAACTTGACCAGATTCA 58.217 47.619 0.00 0.00 32.37 2.57
2506 2900 1.734465 CGGCTGAACTTGACCAGATTC 59.266 52.381 0.00 0.00 32.37 2.52
2507 2901 1.072331 ACGGCTGAACTTGACCAGATT 59.928 47.619 0.00 0.00 32.37 2.40
2508 2902 0.687354 ACGGCTGAACTTGACCAGAT 59.313 50.000 0.00 0.00 32.37 2.90
2509 2903 0.249868 CACGGCTGAACTTGACCAGA 60.250 55.000 0.00 0.00 32.37 3.86
2510 2904 1.845809 GCACGGCTGAACTTGACCAG 61.846 60.000 0.00 0.00 0.00 4.00
2511 2905 1.891919 GCACGGCTGAACTTGACCA 60.892 57.895 0.00 0.00 0.00 4.02
2512 2906 1.569479 GAGCACGGCTGAACTTGACC 61.569 60.000 0.00 0.00 39.88 4.02
2513 2907 0.601311 AGAGCACGGCTGAACTTGAC 60.601 55.000 0.00 0.00 39.88 3.18
2514 2908 0.106708 AAGAGCACGGCTGAACTTGA 59.893 50.000 0.00 0.00 39.88 3.02
2515 2909 0.514691 GAAGAGCACGGCTGAACTTG 59.485 55.000 0.00 0.00 39.88 3.16
2516 2910 0.946221 CGAAGAGCACGGCTGAACTT 60.946 55.000 0.00 0.00 39.88 2.66
2517 2911 1.373497 CGAAGAGCACGGCTGAACT 60.373 57.895 0.00 0.00 39.88 3.01
2518 2912 2.383527 CCGAAGAGCACGGCTGAAC 61.384 63.158 0.00 0.00 43.74 3.18
2519 2913 2.048222 CCGAAGAGCACGGCTGAA 60.048 61.111 0.00 0.00 43.74 3.02
2525 2919 1.068474 CACCTTAACCGAAGAGCACG 58.932 55.000 0.00 0.00 37.33 5.34
2526 2920 1.439679 CCACCTTAACCGAAGAGCAC 58.560 55.000 0.00 0.00 37.33 4.40
2527 2921 0.321298 GCCACCTTAACCGAAGAGCA 60.321 55.000 0.00 0.00 37.33 4.26
2528 2922 0.036294 AGCCACCTTAACCGAAGAGC 60.036 55.000 0.00 0.00 37.33 4.09
2529 2923 2.474410 AAGCCACCTTAACCGAAGAG 57.526 50.000 0.00 0.00 37.33 2.85
2530 2924 2.500229 CAAAGCCACCTTAACCGAAGA 58.500 47.619 0.00 0.00 37.33 2.87
2531 2925 1.539827 CCAAAGCCACCTTAACCGAAG 59.460 52.381 0.00 0.00 34.63 3.79
2532 2926 1.611519 CCAAAGCCACCTTAACCGAA 58.388 50.000 0.00 0.00 0.00 4.30
2533 2927 0.891904 GCCAAAGCCACCTTAACCGA 60.892 55.000 0.00 0.00 0.00 4.69
2534 2928 0.893727 AGCCAAAGCCACCTTAACCG 60.894 55.000 0.00 0.00 41.25 4.44
2535 2929 0.888619 GAGCCAAAGCCACCTTAACC 59.111 55.000 0.00 0.00 41.25 2.85
2536 2930 0.521735 CGAGCCAAAGCCACCTTAAC 59.478 55.000 0.00 0.00 41.25 2.01
2537 2931 1.241315 GCGAGCCAAAGCCACCTTAA 61.241 55.000 0.00 0.00 41.25 1.85
2538 2932 1.674322 GCGAGCCAAAGCCACCTTA 60.674 57.895 0.00 0.00 41.25 2.69
2539 2933 2.985847 GCGAGCCAAAGCCACCTT 60.986 61.111 0.00 0.00 41.25 3.50
2546 2940 3.437795 CTGCCAGGCGAGCCAAAG 61.438 66.667 17.18 5.35 38.92 2.77
2552 2946 4.711949 AGGTTGCTGCCAGGCGAG 62.712 66.667 7.03 6.74 34.52 5.03
2553 2947 4.704833 GAGGTTGCTGCCAGGCGA 62.705 66.667 7.03 0.00 34.52 5.54
2557 2951 3.429141 CTGCGAGGTTGCTGCCAG 61.429 66.667 0.00 0.00 35.36 4.85
2558 2952 4.254709 ACTGCGAGGTTGCTGCCA 62.255 61.111 0.00 0.00 37.32 4.92
2559 2953 3.426568 GACTGCGAGGTTGCTGCC 61.427 66.667 0.00 0.00 37.32 4.85
2560 2954 3.426568 GGACTGCGAGGTTGCTGC 61.427 66.667 0.00 0.00 37.32 5.25
2561 2955 3.114616 CGGACTGCGAGGTTGCTG 61.115 66.667 0.00 0.00 39.43 4.41
2562 2956 3.616721 ACGGACTGCGAGGTTGCT 61.617 61.111 0.00 0.00 35.36 3.91
2563 2957 3.414700 CACGGACTGCGAGGTTGC 61.415 66.667 0.00 0.00 0.00 4.17
2564 2958 2.738521 CCACGGACTGCGAGGTTG 60.739 66.667 0.00 0.00 0.00 3.77
2565 2959 4.003788 CCCACGGACTGCGAGGTT 62.004 66.667 5.74 0.00 0.00 3.50
2567 2961 4.436998 GACCCACGGACTGCGAGG 62.437 72.222 0.00 0.00 0.00 4.63
2568 2962 4.778415 CGACCCACGGACTGCGAG 62.778 72.222 0.00 0.00 38.46 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.