Multiple sequence alignment - TraesCS1A01G091600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G091600 chr1A 100.000 3761 0 0 1 3761 84021445 84025205 0.000000e+00 6946.0
1 TraesCS1A01G091600 chr1D 94.486 1197 49 7 330 1520 87775202 87776387 0.000000e+00 1829.0
2 TraesCS1A01G091600 chr1D 91.636 1100 43 6 1751 2808 87776761 87777853 0.000000e+00 1476.0
3 TraesCS1A01G091600 chr1D 87.874 602 60 11 3098 3696 87778476 87779067 0.000000e+00 695.0
4 TraesCS1A01G091600 chr1D 92.334 287 13 4 2819 3096 87778138 87778424 2.100000e-107 399.0
5 TraesCS1A01G091600 chr1D 90.909 77 4 3 3685 3760 242557553 242557479 2.390000e-17 100.0
6 TraesCS1A01G091600 chr1D 91.176 68 3 3 3693 3760 14523307 14523243 5.170000e-14 89.8
7 TraesCS1A01G091600 chr1B 90.283 1307 67 22 1564 2832 141722406 141723690 0.000000e+00 1655.0
8 TraesCS1A01G091600 chr1B 87.391 920 69 25 678 1564 141721456 141722361 0.000000e+00 1013.0
9 TraesCS1A01G091600 chr1B 87.542 602 56 11 3105 3695 141732785 141733378 0.000000e+00 678.0
10 TraesCS1A01G091600 chr1B 93.750 352 21 1 330 680 141718923 141719274 9.250000e-146 527.0
11 TraesCS1A01G091600 chr1B 95.238 210 10 0 2829 3038 141724916 141725125 2.160000e-87 333.0
12 TraesCS1A01G091600 chr1B 90.278 72 4 2 3687 3758 577190694 577190762 1.440000e-14 91.6
13 TraesCS1A01G091600 chr5D 86.550 342 33 5 1 330 429921081 429920741 7.680000e-97 364.0
14 TraesCS1A01G091600 chr5D 86.647 337 33 9 3 331 472220368 472220036 2.760000e-96 363.0
15 TraesCS1A01G091600 chr5D 95.161 62 2 1 3694 3755 332284451 332284511 3.090000e-16 97.1
16 TraesCS1A01G091600 chr5D 91.304 69 2 3 3692 3760 512215669 512215733 1.440000e-14 91.6
17 TraesCS1A01G091600 chr3D 85.399 363 36 10 3 350 458310023 458309663 9.930000e-96 361.0
18 TraesCS1A01G091600 chr3D 86.012 336 33 8 7 329 610209470 610209804 7.730000e-92 348.0
19 TraesCS1A01G091600 chr3D 85.588 340 34 8 3 328 432137634 432137296 3.600000e-90 342.0
20 TraesCS1A01G091600 chr3D 84.593 344 35 10 1 329 553469995 553469655 3.620000e-85 326.0
21 TraesCS1A01G091600 chr3D 92.647 68 3 2 3694 3760 153078504 153078438 3.090000e-16 97.1
22 TraesCS1A01G091600 chr3D 92.647 68 1 2 3693 3760 87925999 87926062 1.110000e-15 95.3
23 TraesCS1A01G091600 chr3D 85.556 90 7 4 3672 3760 563861140 563861224 5.170000e-14 89.8
24 TraesCS1A01G091600 chr4A 86.167 347 30 8 1 330 622475417 622475762 3.570000e-95 359.0
25 TraesCS1A01G091600 chr4A 86.167 347 30 8 1 330 622509613 622509958 3.570000e-95 359.0
26 TraesCS1A01G091600 chr4A 85.879 347 31 8 1 330 622440546 622440891 1.660000e-93 353.0
27 TraesCS1A01G091600 chr4A 85.879 347 30 8 1 330 622558179 622558523 5.980000e-93 351.0
28 TraesCS1A01G091600 chrUn 85.549 346 32 7 1 329 71622098 71622442 2.780000e-91 346.0
29 TraesCS1A01G091600 chrUn 92.647 68 1 3 3693 3760 116287318 116287255 1.110000e-15 95.3
30 TraesCS1A01G091600 chrUn 91.045 67 2 3 3694 3760 141680907 141680845 1.860000e-13 87.9
31 TraesCS1A01G091600 chrUn 92.188 64 2 3 3693 3756 409687563 409687623 1.860000e-13 87.9
32 TraesCS1A01G091600 chrUn 93.333 60 1 2 3693 3752 74677077 74677133 6.690000e-13 86.1
33 TraesCS1A01G091600 chrUn 89.706 68 3 4 3693 3760 31873105 31873168 2.410000e-12 84.2
34 TraesCS1A01G091600 chrUn 89.706 68 3 3 3693 3760 115041278 115041215 2.410000e-12 84.2
35 TraesCS1A01G091600 chrUn 91.803 61 2 2 3694 3754 245759541 245759484 8.660000e-12 82.4
36 TraesCS1A01G091600 chrUn 93.103 58 1 3 3693 3750 409689005 409689059 8.660000e-12 82.4
37 TraesCS1A01G091600 chrUn 93.103 58 1 3 3693 3750 475479867 475479813 8.660000e-12 82.4
38 TraesCS1A01G091600 chrUn 88.235 68 6 2 3687 3754 112299210 112299275 3.110000e-11 80.5
39 TraesCS1A01G091600 chrUn 87.500 72 4 4 3689 3760 27078510 27078576 1.120000e-10 78.7
40 TraesCS1A01G091600 chrUn 87.500 72 4 4 3690 3760 50639390 50639457 1.120000e-10 78.7
41 TraesCS1A01G091600 chrUn 86.667 75 4 4 3686 3760 127140190 127140122 1.120000e-10 78.7
42 TraesCS1A01G091600 chrUn 85.714 77 5 5 3686 3760 65533284 65533212 4.030000e-10 76.8
43 TraesCS1A01G091600 chr7D 85.100 349 31 11 1 329 611582564 611582911 1.670000e-88 337.0
44 TraesCS1A01G091600 chr7D 85.397 315 31 7 1 301 596533257 596533570 2.820000e-81 313.0
45 TraesCS1A01G091600 chr7D 93.846 65 1 2 3690 3754 135047498 135047559 1.110000e-15 95.3
46 TraesCS1A01G091600 chr7D 92.537 67 3 2 3694 3760 389188187 389188123 1.110000e-15 95.3
47 TraesCS1A01G091600 chr7D 90.411 73 4 1 3689 3761 397555190 397555121 4.000000e-15 93.5
48 TraesCS1A01G091600 chr7D 86.747 83 5 3 3679 3758 154185889 154185968 1.860000e-13 87.9
49 TraesCS1A01G091600 chr6D 86.250 320 29 5 25 329 36685803 36686122 2.160000e-87 333.0
50 TraesCS1A01G091600 chr6D 90.667 75 2 4 3686 3760 426106898 426106829 1.110000e-15 95.3
51 TraesCS1A01G091600 chr6D 91.176 68 2 3 3693 3760 29839567 29839630 5.170000e-14 89.8
52 TraesCS1A01G091600 chr6D 91.176 68 2 4 3693 3760 128092907 128092970 5.170000e-14 89.8
53 TraesCS1A01G091600 chr6D 88.889 72 3 4 3689 3760 21051967 21052033 2.410000e-12 84.2
54 TraesCS1A01G091600 chr4D 85.174 344 29 9 7 329 122174062 122173720 2.160000e-87 333.0
55 TraesCS1A01G091600 chr4D 89.333 75 4 3 3686 3760 64390640 64390570 1.440000e-14 91.6
56 TraesCS1A01G091600 chr4D 91.176 68 2 3 3693 3760 3590473 3590536 5.170000e-14 89.8
57 TraesCS1A01G091600 chr4D 91.045 67 4 2 3694 3760 65101297 65101361 5.170000e-14 89.8
58 TraesCS1A01G091600 chr4D 90.278 72 2 3 3689 3760 455326605 455326539 5.170000e-14 89.8
59 TraesCS1A01G091600 chr4D 89.041 73 3 3 3688 3760 117421186 117421253 6.690000e-13 86.1
60 TraesCS1A01G091600 chr5B 84.457 341 33 11 3 327 591820009 591820345 6.060000e-83 318.0
61 TraesCS1A01G091600 chr4B 81.633 343 46 5 3 329 506006895 506007236 6.190000e-68 268.0
62 TraesCS1A01G091600 chr5A 91.892 74 2 2 3688 3761 320214410 320214341 2.390000e-17 100.0
63 TraesCS1A01G091600 chr2A 86.667 90 6 4 3672 3760 7920869 7920953 1.110000e-15 95.3
64 TraesCS1A01G091600 chr7B 90.411 73 4 1 3689 3761 401532727 401532658 4.000000e-15 93.5
65 TraesCS1A01G091600 chr2B 93.220 59 4 0 1369 1427 100325945 100326003 1.860000e-13 87.9
66 TraesCS1A01G091600 chr2D 91.525 59 5 0 1369 1427 64157504 64157562 8.660000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G091600 chr1A 84021445 84025205 3760 False 6946.00 6946 100.0000 1 3761 1 chr1A.!!$F1 3760
1 TraesCS1A01G091600 chr1D 87775202 87779067 3865 False 1099.75 1829 91.5825 330 3696 4 chr1D.!!$F1 3366
2 TraesCS1A01G091600 chr1B 141718923 141725125 6202 False 882.00 1655 91.6655 330 3038 4 chr1B.!!$F3 2708
3 TraesCS1A01G091600 chr1B 141732785 141733378 593 False 678.00 678 87.5420 3105 3695 1 chr1B.!!$F1 590

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
312 313 0.103208 GGTACAGATGAGCTCGGGTG 59.897 60.0 9.64 8.28 0.0 4.61 F
1723 4044 0.036875 GTCCCCTGTTTCCCTCACTG 59.963 60.0 0.00 0.00 0.0 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1906 4287 0.036388 ACGGAGACATTGCCAACGAT 60.036 50.0 0.00 0.0 0.00 3.73 R
3060 6992 0.242555 TGCACTAGTCGCACGAATCA 59.757 50.0 13.71 0.0 33.55 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 4.804608 TTGTGTGGTAGACAATTTGACG 57.195 40.909 2.79 0.00 35.91 4.35
47 48 4.061357 TGTGTGGTAGACAATTTGACGA 57.939 40.909 2.79 0.00 35.91 4.20
48 49 4.055360 TGTGTGGTAGACAATTTGACGAG 58.945 43.478 2.79 0.00 35.91 4.18
49 50 4.056050 GTGTGGTAGACAATTTGACGAGT 58.944 43.478 2.79 0.00 35.91 4.18
50 51 4.055360 TGTGGTAGACAATTTGACGAGTG 58.945 43.478 2.79 0.00 0.00 3.51
51 52 4.202172 TGTGGTAGACAATTTGACGAGTGA 60.202 41.667 2.79 0.00 0.00 3.41
52 53 4.386049 GTGGTAGACAATTTGACGAGTGAG 59.614 45.833 2.79 0.00 0.00 3.51
53 54 3.927142 GGTAGACAATTTGACGAGTGAGG 59.073 47.826 2.79 0.00 0.00 3.86
54 55 2.417719 AGACAATTTGACGAGTGAGGC 58.582 47.619 2.79 0.00 0.00 4.70
55 56 1.464997 GACAATTTGACGAGTGAGGCC 59.535 52.381 2.79 0.00 0.00 5.19
56 57 0.804989 CAATTTGACGAGTGAGGCCC 59.195 55.000 0.00 0.00 0.00 5.80
57 58 0.673644 AATTTGACGAGTGAGGCCCG 60.674 55.000 0.00 0.00 0.00 6.13
58 59 3.876589 TTTGACGAGTGAGGCCCGC 62.877 63.158 0.00 0.00 0.00 6.13
60 61 4.500116 GACGAGTGAGGCCCGCTC 62.500 72.222 19.29 19.29 46.29 5.03
63 64 3.706373 GAGTGAGGCCCGCTCCAA 61.706 66.667 18.78 0.00 44.56 3.53
64 65 3.249189 AGTGAGGCCCGCTCCAAA 61.249 61.111 0.00 0.00 0.00 3.28
65 66 2.044946 GTGAGGCCCGCTCCAAAT 60.045 61.111 0.00 0.00 0.00 2.32
66 67 1.678970 GTGAGGCCCGCTCCAAATT 60.679 57.895 0.00 0.00 0.00 1.82
67 68 1.076549 TGAGGCCCGCTCCAAATTT 59.923 52.632 0.00 0.00 0.00 1.82
68 69 0.965363 TGAGGCCCGCTCCAAATTTC 60.965 55.000 0.00 0.00 0.00 2.17
69 70 0.965363 GAGGCCCGCTCCAAATTTCA 60.965 55.000 0.00 0.00 0.00 2.69
70 71 0.541764 AGGCCCGCTCCAAATTTCAA 60.542 50.000 0.00 0.00 0.00 2.69
71 72 0.108662 GGCCCGCTCCAAATTTCAAG 60.109 55.000 0.00 0.00 0.00 3.02
72 73 0.603065 GCCCGCTCCAAATTTCAAGT 59.397 50.000 0.00 0.00 0.00 3.16
73 74 1.402852 GCCCGCTCCAAATTTCAAGTC 60.403 52.381 0.00 0.00 0.00 3.01
74 75 1.885887 CCCGCTCCAAATTTCAAGTCA 59.114 47.619 0.00 0.00 0.00 3.41
75 76 2.493278 CCCGCTCCAAATTTCAAGTCAT 59.507 45.455 0.00 0.00 0.00 3.06
76 77 3.056607 CCCGCTCCAAATTTCAAGTCATT 60.057 43.478 0.00 0.00 0.00 2.57
77 78 4.559153 CCGCTCCAAATTTCAAGTCATTT 58.441 39.130 0.00 0.00 0.00 2.32
78 79 4.386652 CCGCTCCAAATTTCAAGTCATTTG 59.613 41.667 0.00 0.00 39.25 2.32
79 80 5.221880 CGCTCCAAATTTCAAGTCATTTGA 58.778 37.500 6.25 0.00 43.92 2.69
91 92 7.430992 TCAAGTCATTTGAACATCTGAGAAG 57.569 36.000 0.00 0.00 42.69 2.85
92 93 5.876612 AGTCATTTGAACATCTGAGAAGC 57.123 39.130 0.00 0.00 0.00 3.86
93 94 5.558818 AGTCATTTGAACATCTGAGAAGCT 58.441 37.500 0.00 0.00 0.00 3.74
94 95 5.642919 AGTCATTTGAACATCTGAGAAGCTC 59.357 40.000 0.00 0.00 0.00 4.09
95 96 5.642919 GTCATTTGAACATCTGAGAAGCTCT 59.357 40.000 0.00 0.00 0.00 4.09
96 97 5.873712 TCATTTGAACATCTGAGAAGCTCTC 59.126 40.000 6.31 6.31 43.65 3.20
129 130 8.622948 AAAAACAAATTGGACCAAAACAGTAA 57.377 26.923 11.82 0.00 0.00 2.24
130 131 8.622948 AAAACAAATTGGACCAAAACAGTAAA 57.377 26.923 11.82 0.00 0.00 2.01
131 132 7.603963 AACAAATTGGACCAAAACAGTAAAC 57.396 32.000 11.82 0.00 0.00 2.01
132 133 6.941857 ACAAATTGGACCAAAACAGTAAACT 58.058 32.000 11.82 0.00 0.00 2.66
133 134 7.390823 ACAAATTGGACCAAAACAGTAAACTT 58.609 30.769 11.82 0.00 0.00 2.66
134 135 7.880713 ACAAATTGGACCAAAACAGTAAACTTT 59.119 29.630 11.82 0.18 0.00 2.66
135 136 8.726068 CAAATTGGACCAAAACAGTAAACTTTT 58.274 29.630 11.82 0.00 0.00 2.27
136 137 8.856153 AATTGGACCAAAACAGTAAACTTTTT 57.144 26.923 11.82 0.00 0.00 1.94
154 155 2.785357 TTTCCAGACCCCCAATTTGT 57.215 45.000 0.00 0.00 0.00 2.83
155 156 3.905493 TTTCCAGACCCCCAATTTGTA 57.095 42.857 0.00 0.00 0.00 2.41
156 157 4.412060 TTTCCAGACCCCCAATTTGTAT 57.588 40.909 0.00 0.00 0.00 2.29
157 158 4.412060 TTCCAGACCCCCAATTTGTATT 57.588 40.909 0.00 0.00 0.00 1.89
158 159 4.412060 TCCAGACCCCCAATTTGTATTT 57.588 40.909 0.00 0.00 0.00 1.40
159 160 4.757692 TCCAGACCCCCAATTTGTATTTT 58.242 39.130 0.00 0.00 0.00 1.82
160 161 5.158889 TCCAGACCCCCAATTTGTATTTTT 58.841 37.500 0.00 0.00 0.00 1.94
180 181 5.746307 TTTTGCTGAGAGCTGCTAATATG 57.254 39.130 0.15 0.00 42.97 1.78
181 182 4.412796 TTGCTGAGAGCTGCTAATATGT 57.587 40.909 0.15 0.00 42.97 2.29
182 183 4.412796 TGCTGAGAGCTGCTAATATGTT 57.587 40.909 0.15 0.00 42.97 2.71
183 184 4.375272 TGCTGAGAGCTGCTAATATGTTC 58.625 43.478 0.15 0.00 42.97 3.18
184 185 4.141869 TGCTGAGAGCTGCTAATATGTTCA 60.142 41.667 0.15 0.00 42.97 3.18
185 186 4.813161 GCTGAGAGCTGCTAATATGTTCAA 59.187 41.667 0.15 0.00 38.45 2.69
186 187 5.295292 GCTGAGAGCTGCTAATATGTTCAAA 59.705 40.000 0.15 0.00 38.45 2.69
187 188 6.017275 GCTGAGAGCTGCTAATATGTTCAAAT 60.017 38.462 0.15 0.00 38.45 2.32
188 189 7.255491 TGAGAGCTGCTAATATGTTCAAATG 57.745 36.000 0.15 0.00 0.00 2.32
189 190 7.049754 TGAGAGCTGCTAATATGTTCAAATGA 58.950 34.615 0.15 0.00 0.00 2.57
190 191 7.011763 TGAGAGCTGCTAATATGTTCAAATGAC 59.988 37.037 0.15 0.00 0.00 3.06
191 192 7.052873 AGAGCTGCTAATATGTTCAAATGACT 58.947 34.615 0.15 0.00 0.00 3.41
192 193 7.555554 AGAGCTGCTAATATGTTCAAATGACTT 59.444 33.333 0.15 0.00 0.00 3.01
193 194 7.478322 AGCTGCTAATATGTTCAAATGACTTG 58.522 34.615 0.00 0.00 36.25 3.16
194 195 7.337689 AGCTGCTAATATGTTCAAATGACTTGA 59.662 33.333 0.00 0.00 42.48 3.02
205 206 5.221880 TCAAATGACTTGAAATTTGGAGCG 58.778 37.500 0.00 0.00 41.21 5.03
206 207 3.855689 ATGACTTGAAATTTGGAGCGG 57.144 42.857 0.00 0.00 0.00 5.52
207 208 1.885887 TGACTTGAAATTTGGAGCGGG 59.114 47.619 0.00 0.00 0.00 6.13
208 209 0.603065 ACTTGAAATTTGGAGCGGGC 59.397 50.000 0.00 0.00 0.00 6.13
209 210 0.108662 CTTGAAATTTGGAGCGGGCC 60.109 55.000 0.00 0.00 0.00 5.80
210 211 0.541764 TTGAAATTTGGAGCGGGCCT 60.542 50.000 0.84 0.00 0.00 5.19
211 212 0.965363 TGAAATTTGGAGCGGGCCTC 60.965 55.000 0.84 0.00 39.98 4.70
212 213 0.965363 GAAATTTGGAGCGGGCCTCA 60.965 55.000 0.84 0.00 42.62 3.86
213 214 1.250840 AAATTTGGAGCGGGCCTCAC 61.251 55.000 0.84 0.00 42.62 3.51
214 215 3.976701 ATTTGGAGCGGGCCTCACG 62.977 63.158 0.84 0.00 42.62 4.35
221 222 2.745884 CGGGCCTCACGCATCAAA 60.746 61.111 0.84 0.00 40.31 2.69
222 223 2.331893 CGGGCCTCACGCATCAAAA 61.332 57.895 0.84 0.00 40.31 2.44
223 224 1.656818 CGGGCCTCACGCATCAAAAT 61.657 55.000 0.84 0.00 40.31 1.82
224 225 0.532115 GGGCCTCACGCATCAAAATT 59.468 50.000 0.84 0.00 40.31 1.82
225 226 1.066929 GGGCCTCACGCATCAAAATTT 60.067 47.619 0.84 0.00 40.31 1.82
226 227 2.262211 GGCCTCACGCATCAAAATTTC 58.738 47.619 0.00 0.00 40.31 2.17
227 228 2.094545 GGCCTCACGCATCAAAATTTCT 60.095 45.455 0.00 0.00 40.31 2.52
228 229 3.128589 GGCCTCACGCATCAAAATTTCTA 59.871 43.478 0.00 0.00 40.31 2.10
229 230 4.098416 GCCTCACGCATCAAAATTTCTAC 58.902 43.478 0.00 0.00 37.47 2.59
230 231 4.662145 CCTCACGCATCAAAATTTCTACC 58.338 43.478 0.00 0.00 0.00 3.18
231 232 4.334443 CTCACGCATCAAAATTTCTACCG 58.666 43.478 0.00 0.00 0.00 4.02
232 233 2.845967 CACGCATCAAAATTTCTACCGC 59.154 45.455 0.00 0.00 0.00 5.68
233 234 2.486203 ACGCATCAAAATTTCTACCGCA 59.514 40.909 0.00 0.00 0.00 5.69
234 235 2.845967 CGCATCAAAATTTCTACCGCAC 59.154 45.455 0.00 0.00 0.00 5.34
235 236 3.669290 CGCATCAAAATTTCTACCGCACA 60.669 43.478 0.00 0.00 0.00 4.57
236 237 4.233789 GCATCAAAATTTCTACCGCACAA 58.766 39.130 0.00 0.00 0.00 3.33
237 238 4.683781 GCATCAAAATTTCTACCGCACAAA 59.316 37.500 0.00 0.00 0.00 2.83
238 239 5.176590 GCATCAAAATTTCTACCGCACAAAA 59.823 36.000 0.00 0.00 0.00 2.44
239 240 6.292596 GCATCAAAATTTCTACCGCACAAAAA 60.293 34.615 0.00 0.00 0.00 1.94
298 299 2.552599 TTTTCATCAGCACGGGTACA 57.447 45.000 0.00 0.00 0.00 2.90
299 300 2.093306 TTTCATCAGCACGGGTACAG 57.907 50.000 0.00 0.00 0.00 2.74
300 301 1.262417 TTCATCAGCACGGGTACAGA 58.738 50.000 0.00 0.00 0.00 3.41
301 302 1.485124 TCATCAGCACGGGTACAGAT 58.515 50.000 0.00 0.00 0.00 2.90
302 303 1.136891 TCATCAGCACGGGTACAGATG 59.863 52.381 0.00 0.00 35.42 2.90
303 304 1.136891 CATCAGCACGGGTACAGATGA 59.863 52.381 0.00 0.00 35.98 2.92
304 305 0.817654 TCAGCACGGGTACAGATGAG 59.182 55.000 0.00 0.00 0.00 2.90
305 306 0.807667 CAGCACGGGTACAGATGAGC 60.808 60.000 0.00 0.00 0.00 4.26
306 307 0.972983 AGCACGGGTACAGATGAGCT 60.973 55.000 0.00 0.00 0.00 4.09
307 308 0.528684 GCACGGGTACAGATGAGCTC 60.529 60.000 6.82 6.82 0.00 4.09
308 309 0.248661 CACGGGTACAGATGAGCTCG 60.249 60.000 9.64 0.00 0.00 5.03
309 310 1.360551 CGGGTACAGATGAGCTCGG 59.639 63.158 9.64 1.01 0.00 4.63
310 311 1.742768 GGGTACAGATGAGCTCGGG 59.257 63.158 9.64 0.63 0.00 5.14
311 312 1.043673 GGGTACAGATGAGCTCGGGT 61.044 60.000 9.64 6.90 0.00 5.28
312 313 0.103208 GGTACAGATGAGCTCGGGTG 59.897 60.000 9.64 8.28 0.00 4.61
313 314 0.528684 GTACAGATGAGCTCGGGTGC 60.529 60.000 9.64 4.38 0.00 5.01
314 315 0.970427 TACAGATGAGCTCGGGTGCA 60.970 55.000 9.64 0.00 34.99 4.57
315 316 1.521010 CAGATGAGCTCGGGTGCAG 60.521 63.158 9.64 0.00 34.99 4.41
316 317 1.683707 AGATGAGCTCGGGTGCAGA 60.684 57.895 9.64 0.00 34.99 4.26
317 318 1.227205 GATGAGCTCGGGTGCAGAG 60.227 63.158 9.64 0.00 38.68 3.35
318 319 1.670949 GATGAGCTCGGGTGCAGAGA 61.671 60.000 9.64 0.00 37.93 3.10
319 320 1.047596 ATGAGCTCGGGTGCAGAGAT 61.048 55.000 9.64 0.00 37.93 2.75
320 321 1.227205 GAGCTCGGGTGCAGAGATG 60.227 63.158 0.00 0.00 37.93 2.90
321 322 2.202987 GCTCGGGTGCAGAGATGG 60.203 66.667 5.67 0.00 37.93 3.51
322 323 2.725312 GCTCGGGTGCAGAGATGGA 61.725 63.158 5.67 0.00 37.93 3.41
323 324 2.037620 GCTCGGGTGCAGAGATGGAT 62.038 60.000 5.67 0.00 37.93 3.41
324 325 0.467384 CTCGGGTGCAGAGATGGATT 59.533 55.000 0.00 0.00 37.93 3.01
325 326 0.911769 TCGGGTGCAGAGATGGATTT 59.088 50.000 0.00 0.00 0.00 2.17
326 327 1.281867 TCGGGTGCAGAGATGGATTTT 59.718 47.619 0.00 0.00 0.00 1.82
327 328 1.672881 CGGGTGCAGAGATGGATTTTC 59.327 52.381 0.00 0.00 0.00 2.29
328 329 1.672881 GGGTGCAGAGATGGATTTTCG 59.327 52.381 0.00 0.00 0.00 3.46
447 448 1.529226 ATTTTCACATCGAACCGCCA 58.471 45.000 0.00 0.00 31.73 5.69
499 500 2.440539 ACACAGACGAGTGATGGAAC 57.559 50.000 12.76 0.00 42.05 3.62
505 506 7.341342 ACACAGACGAGTGATGGAACAATATG 61.341 42.308 12.76 0.00 42.26 1.78
624 626 9.865484 GTAGACTTTGAATCAACAAGAACTTAC 57.135 33.333 0.00 0.00 0.00 2.34
711 2897 7.699812 CCTTAGACAAAGTAAGTGTATCGTACC 59.300 40.741 0.00 0.00 32.80 3.34
759 2946 2.300723 TCCGCTCCACTTGCTTACTTTA 59.699 45.455 0.00 0.00 0.00 1.85
760 2947 3.071479 CCGCTCCACTTGCTTACTTTAA 58.929 45.455 0.00 0.00 0.00 1.52
761 2948 3.500680 CCGCTCCACTTGCTTACTTTAAA 59.499 43.478 0.00 0.00 0.00 1.52
762 2949 4.023536 CCGCTCCACTTGCTTACTTTAAAA 60.024 41.667 0.00 0.00 0.00 1.52
919 3112 4.078537 CACCCATTCATTCCACTACACAA 58.921 43.478 0.00 0.00 0.00 3.33
921 3114 4.202567 ACCCATTCATTCCACTACACAACT 60.203 41.667 0.00 0.00 0.00 3.16
1160 3353 0.612174 TTCCCTGTGACCTCTCTCCG 60.612 60.000 0.00 0.00 0.00 4.63
1218 3411 1.970917 GCGCACAGCCACTCATGTAC 61.971 60.000 0.30 0.00 40.81 2.90
1232 3425 4.775780 ACTCATGTACCAGGTAAGCAGTTA 59.224 41.667 0.00 0.00 0.00 2.24
1278 3493 4.814234 TCTTCGTTTGTCTGCTATGTTTGT 59.186 37.500 0.00 0.00 0.00 2.83
1282 3497 5.741510 TCGTTTGTCTGCTATGTTTGTTTTG 59.258 36.000 0.00 0.00 0.00 2.44
1323 3546 5.136105 AGATTCTTATGAGGTTTCCATGGC 58.864 41.667 6.96 0.00 0.00 4.40
1414 3637 0.951040 GGTCAAGAAGGTGCTCCACG 60.951 60.000 7.70 0.00 34.83 4.94
1499 3727 5.654497 AGAGAAAACAAGGCAGAAAAACAG 58.346 37.500 0.00 0.00 0.00 3.16
1502 3730 6.930731 AGAAAACAAGGCAGAAAAACAGTTA 58.069 32.000 0.00 0.00 0.00 2.24
1503 3731 7.382898 AGAAAACAAGGCAGAAAAACAGTTAA 58.617 30.769 0.00 0.00 0.00 2.01
1506 3734 7.971183 AACAAGGCAGAAAAACAGTTAAAAA 57.029 28.000 0.00 0.00 0.00 1.94
1522 3764 7.986889 ACAGTTAAAAATGTTCAGCAAATCCTT 59.013 29.630 0.00 0.00 32.71 3.36
1540 3782 4.911390 TCCTTTGAAAGCTCCCTAGAAAG 58.089 43.478 0.00 0.00 0.00 2.62
1547 3789 0.905357 GCTCCCTAGAAAGGCAGTGA 59.095 55.000 0.00 0.00 42.14 3.41
1554 3796 4.080863 CCCTAGAAAGGCAGTGATAGTGTT 60.081 45.833 0.00 0.00 42.14 3.32
1605 3922 4.248691 AGGCTTTGATTTCAACTTCAGC 57.751 40.909 6.27 6.27 36.04 4.26
1608 3925 4.261741 GGCTTTGATTTCAACTTCAGCTCA 60.262 41.667 12.12 0.00 36.65 4.26
1615 3932 6.767902 TGATTTCAACTTCAGCTCAGTAAACT 59.232 34.615 0.00 0.00 0.00 2.66
1671 3992 5.475564 GTGATGTTTTATGTGTGTACCCCTT 59.524 40.000 0.00 0.00 0.00 3.95
1672 3993 5.475220 TGATGTTTTATGTGTGTACCCCTTG 59.525 40.000 0.00 0.00 0.00 3.61
1673 3994 4.794334 TGTTTTATGTGTGTACCCCTTGT 58.206 39.130 0.00 0.00 0.00 3.16
1674 3995 5.938279 TGTTTTATGTGTGTACCCCTTGTA 58.062 37.500 0.00 0.00 0.00 2.41
1675 3996 6.544650 TGTTTTATGTGTGTACCCCTTGTAT 58.455 36.000 0.00 0.00 0.00 2.29
1723 4044 0.036875 GTCCCCTGTTTCCCTCACTG 59.963 60.000 0.00 0.00 0.00 3.66
1764 4142 7.116233 GCATTGAATTGGTGTTTAGTAGGTTTG 59.884 37.037 0.00 0.00 0.00 2.93
1792 4170 4.928601 CACATGAAAGTGCTTATGGGATG 58.071 43.478 0.00 0.00 32.04 3.51
1797 4177 7.342799 ACATGAAAGTGCTTATGGGATGTAAAT 59.657 33.333 0.00 0.00 0.00 1.40
1906 4287 0.035317 CCAGCAGCACAAGGTAGTGA 59.965 55.000 0.00 0.00 42.05 3.41
2136 4541 2.610859 GGAGGCTCTGTTCCCCCA 60.611 66.667 15.23 0.00 0.00 4.96
2384 4804 1.102978 GGAGGCAATAACGGCAATGT 58.897 50.000 0.00 0.00 0.00 2.71
2436 4856 1.026182 CAGCGCAGATTAGCCCACAA 61.026 55.000 11.47 0.00 0.00 3.33
2466 4886 0.748005 CGAATCCCGCCACAGGAAAT 60.748 55.000 0.00 0.00 36.85 2.17
2478 4898 3.087031 CACAGGAAATGCCAGTCAGAAT 58.913 45.455 0.00 0.00 40.02 2.40
2479 4899 3.128242 CACAGGAAATGCCAGTCAGAATC 59.872 47.826 0.00 0.00 40.02 2.52
2634 5054 1.065928 GAGCAGCGCGTACTACCAT 59.934 57.895 8.43 0.00 0.00 3.55
2768 5188 2.475187 GCAGCGTCATGTGAGATTGTTC 60.475 50.000 0.00 0.00 0.00 3.18
2771 5191 2.157668 GCGTCATGTGAGATTGTTCGTT 59.842 45.455 0.00 0.00 0.00 3.85
2772 5192 3.366724 GCGTCATGTGAGATTGTTCGTTA 59.633 43.478 0.00 0.00 0.00 3.18
2773 5193 4.490959 GCGTCATGTGAGATTGTTCGTTAG 60.491 45.833 0.00 0.00 0.00 2.34
2810 5230 6.486993 GGTTAGATGATTAATGAACTGGTCCC 59.513 42.308 0.00 0.00 0.00 4.46
2834 6757 7.542130 CCCTTGTAATTTAAGCAACTTTAGCTG 59.458 37.037 0.00 0.00 42.53 4.24
2913 6836 2.033372 TGCAACCTATTCATGGCATGG 58.967 47.619 26.15 13.05 0.00 3.66
2939 6862 1.501169 GCTGTGTCAACCAAATTGCC 58.499 50.000 0.00 0.00 38.29 4.52
2977 6900 5.935789 AGTTGATGGAAATTTTGGCATTGAG 59.064 36.000 0.00 0.00 0.00 3.02
3024 6947 5.652014 TCGGATTTTTAATGGCATCTGAAGT 59.348 36.000 0.00 0.00 29.75 3.01
3038 6964 5.654209 GCATCTGAAGTTAGGGGAGAAAAAT 59.346 40.000 0.00 0.00 0.00 1.82
3042 6968 3.825908 AGTTAGGGGAGAAAAATGCCA 57.174 42.857 0.00 0.00 30.95 4.92
3046 6972 2.529632 AGGGGAGAAAAATGCCACTTC 58.470 47.619 0.00 0.00 29.06 3.01
3055 6981 2.460757 AATGCCACTTCCATTTGTGC 57.539 45.000 0.00 0.00 33.26 4.57
3060 6992 2.483538 GCCACTTCCATTTGTGCTTTGT 60.484 45.455 0.00 0.00 33.26 2.83
3084 7016 2.282407 TCGTGCGACTAGTGCATAGTA 58.718 47.619 18.61 6.54 45.06 1.82
3103 7035 8.863049 GCATAGTATTGCAATACATTTTATGCC 58.137 33.333 36.82 28.27 41.07 4.40
3117 7099 3.627395 TTATGCCGAGGTGTTCTCATT 57.373 42.857 0.00 0.00 42.55 2.57
3132 7114 0.189574 TCATTGGGGGTTCCTTTGCA 59.810 50.000 0.00 0.00 36.20 4.08
3147 7129 3.372206 CCTTTGCAATCTAGAAGTGTCGG 59.628 47.826 0.00 0.00 0.00 4.79
3205 7187 3.161866 ACCATGCGGTTATGAGGTTTTT 58.838 40.909 0.00 0.00 46.31 1.94
3260 7242 5.438972 TGTATCCGTTTTTACCGTTTTTCG 58.561 37.500 0.00 0.00 39.52 3.46
3269 7252 8.728630 CGTTTTTACCGTTTTTCGTAAATAACA 58.271 29.630 1.27 0.00 37.94 2.41
3284 7267 6.093495 CGTAAATAACAGGGCAATTCTCTTCA 59.907 38.462 0.00 0.00 0.00 3.02
3288 7271 4.640771 ACAGGGCAATTCTCTTCAACTA 57.359 40.909 0.00 0.00 0.00 2.24
3337 7321 9.941325 TTTGCATATGTTTCAGAAAAATACCAT 57.059 25.926 7.81 4.90 0.00 3.55
3339 7323 8.530311 TGCATATGTTTCAGAAAAATACCATGT 58.470 29.630 7.81 0.00 0.00 3.21
3374 7358 4.464008 TGTCAAAAGGAGAAATGCTGAGT 58.536 39.130 0.00 0.00 0.00 3.41
3376 7360 3.822735 TCAAAAGGAGAAATGCTGAGTGG 59.177 43.478 0.00 0.00 0.00 4.00
3377 7361 1.831580 AAGGAGAAATGCTGAGTGGC 58.168 50.000 0.00 0.00 0.00 5.01
3378 7362 0.694771 AGGAGAAATGCTGAGTGGCA 59.305 50.000 0.00 0.00 46.63 4.92
3387 7371 1.315690 GCTGAGTGGCATGCATATGT 58.684 50.000 21.36 0.00 36.65 2.29
3407 7391 9.868277 CATATGTATACTCAAAGATTCTCTCCC 57.132 37.037 4.17 0.00 0.00 4.30
3475 7459 9.807649 AATGATTGATACCTTATGAAGCAAAAC 57.192 29.630 0.00 0.00 31.93 2.43
3482 7473 9.129209 GATACCTTATGAAGCAAAACTGTTTTC 57.871 33.333 15.17 10.44 0.00 2.29
3483 7474 6.280643 ACCTTATGAAGCAAAACTGTTTTCC 58.719 36.000 15.17 7.18 0.00 3.13
3486 7477 8.141268 CCTTATGAAGCAAAACTGTTTTCCTAA 58.859 33.333 15.17 5.33 0.00 2.69
3529 7520 5.392057 GCGCCAAGAGCTTTTAAGAAATACT 60.392 40.000 0.00 0.00 40.39 2.12
3631 7623 3.462982 TCGCAAGTTTCACTTAAGCAGA 58.537 40.909 1.29 0.00 36.03 4.26
3681 7673 9.773328 TCAACGATTTGATCATTTATTTCACTC 57.227 29.630 0.00 0.00 36.79 3.51
3696 7688 4.345859 TTCACTCCCGTTGTTTCATACT 57.654 40.909 0.00 0.00 0.00 2.12
3697 7689 3.921677 TCACTCCCGTTGTTTCATACTC 58.078 45.455 0.00 0.00 0.00 2.59
3698 7690 3.000727 CACTCCCGTTGTTTCATACTCC 58.999 50.000 0.00 0.00 0.00 3.85
3699 7691 2.027469 ACTCCCGTTGTTTCATACTCCC 60.027 50.000 0.00 0.00 0.00 4.30
3700 7692 2.236395 CTCCCGTTGTTTCATACTCCCT 59.764 50.000 0.00 0.00 0.00 4.20
3701 7693 2.640826 TCCCGTTGTTTCATACTCCCTT 59.359 45.455 0.00 0.00 0.00 3.95
3702 7694 3.007635 CCCGTTGTTTCATACTCCCTTC 58.992 50.000 0.00 0.00 0.00 3.46
3703 7695 2.671396 CCGTTGTTTCATACTCCCTTCG 59.329 50.000 0.00 0.00 0.00 3.79
3704 7696 3.323243 CGTTGTTTCATACTCCCTTCGT 58.677 45.455 0.00 0.00 0.00 3.85
3705 7697 3.744426 CGTTGTTTCATACTCCCTTCGTT 59.256 43.478 0.00 0.00 0.00 3.85
3706 7698 4.143179 CGTTGTTTCATACTCCCTTCGTTC 60.143 45.833 0.00 0.00 0.00 3.95
3707 7699 3.934068 TGTTTCATACTCCCTTCGTTCC 58.066 45.455 0.00 0.00 0.00 3.62
3708 7700 3.581332 TGTTTCATACTCCCTTCGTTCCT 59.419 43.478 0.00 0.00 0.00 3.36
3709 7701 4.773674 TGTTTCATACTCCCTTCGTTCCTA 59.226 41.667 0.00 0.00 0.00 2.94
3710 7702 5.246656 TGTTTCATACTCCCTTCGTTCCTAA 59.753 40.000 0.00 0.00 0.00 2.69
3711 7703 6.168389 GTTTCATACTCCCTTCGTTCCTAAA 58.832 40.000 0.00 0.00 0.00 1.85
3712 7704 6.555463 TTCATACTCCCTTCGTTCCTAAAT 57.445 37.500 0.00 0.00 0.00 1.40
3713 7705 7.664552 TTCATACTCCCTTCGTTCCTAAATA 57.335 36.000 0.00 0.00 0.00 1.40
3714 7706 7.850935 TCATACTCCCTTCGTTCCTAAATAT 57.149 36.000 0.00 0.00 0.00 1.28
3715 7707 8.945195 TCATACTCCCTTCGTTCCTAAATATA 57.055 34.615 0.00 0.00 0.00 0.86
3716 7708 9.370930 TCATACTCCCTTCGTTCCTAAATATAA 57.629 33.333 0.00 0.00 0.00 0.98
3717 7709 9.640963 CATACTCCCTTCGTTCCTAAATATAAG 57.359 37.037 0.00 0.00 0.00 1.73
3718 7710 7.672122 ACTCCCTTCGTTCCTAAATATAAGT 57.328 36.000 0.00 0.00 0.00 2.24
3719 7711 7.724287 ACTCCCTTCGTTCCTAAATATAAGTC 58.276 38.462 0.00 0.00 0.00 3.01
3720 7712 7.564292 ACTCCCTTCGTTCCTAAATATAAGTCT 59.436 37.037 0.00 0.00 0.00 3.24
3721 7713 8.315220 TCCCTTCGTTCCTAAATATAAGTCTT 57.685 34.615 0.00 0.00 0.00 3.01
3722 7714 8.765517 TCCCTTCGTTCCTAAATATAAGTCTTT 58.234 33.333 0.00 0.00 0.00 2.52
3723 7715 9.392259 CCCTTCGTTCCTAAATATAAGTCTTTT 57.608 33.333 0.00 0.00 0.00 2.27
3751 7743 8.708378 AGAGATTTCATCAATATGGACTACACA 58.292 33.333 0.00 0.00 33.61 3.72
3752 7744 8.668510 AGATTTCATCAATATGGACTACACAC 57.331 34.615 0.00 0.00 33.61 3.82
3753 7745 6.902224 TTTCATCAATATGGACTACACACG 57.098 37.500 0.00 0.00 33.61 4.49
3754 7746 4.944048 TCATCAATATGGACTACACACGG 58.056 43.478 0.00 0.00 33.61 4.94
3755 7747 4.647399 TCATCAATATGGACTACACACGGA 59.353 41.667 0.00 0.00 33.61 4.69
3756 7748 5.304357 TCATCAATATGGACTACACACGGAT 59.696 40.000 0.00 0.00 33.61 4.18
3757 7749 4.944048 TCAATATGGACTACACACGGATG 58.056 43.478 0.00 0.00 0.00 3.51
3758 7750 2.882927 TATGGACTACACACGGATGC 57.117 50.000 0.00 0.00 0.00 3.91
3759 7751 0.901827 ATGGACTACACACGGATGCA 59.098 50.000 0.00 0.00 0.00 3.96
3760 7752 0.901827 TGGACTACACACGGATGCAT 59.098 50.000 0.00 0.00 0.00 3.96
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 6.030849 CGTCAAATTGTCTACCACACAAAAA 58.969 36.000 0.00 0.00 37.30 1.94
23 24 5.354513 TCGTCAAATTGTCTACCACACAAAA 59.645 36.000 0.00 0.00 37.30 2.44
24 25 4.876679 TCGTCAAATTGTCTACCACACAAA 59.123 37.500 0.00 0.00 37.30 2.83
25 26 4.443621 TCGTCAAATTGTCTACCACACAA 58.556 39.130 0.00 0.00 38.12 3.33
26 27 4.055360 CTCGTCAAATTGTCTACCACACA 58.945 43.478 0.00 0.00 33.41 3.72
27 28 4.056050 ACTCGTCAAATTGTCTACCACAC 58.944 43.478 0.00 0.00 33.41 3.82
28 29 4.055360 CACTCGTCAAATTGTCTACCACA 58.945 43.478 0.00 0.00 0.00 4.17
29 30 4.304110 TCACTCGTCAAATTGTCTACCAC 58.696 43.478 0.00 0.00 0.00 4.16
30 31 4.556233 CTCACTCGTCAAATTGTCTACCA 58.444 43.478 0.00 0.00 0.00 3.25
31 32 3.927142 CCTCACTCGTCAAATTGTCTACC 59.073 47.826 0.00 0.00 0.00 3.18
32 33 3.368236 GCCTCACTCGTCAAATTGTCTAC 59.632 47.826 0.00 0.00 0.00 2.59
33 34 3.585862 GCCTCACTCGTCAAATTGTCTA 58.414 45.455 0.00 0.00 0.00 2.59
34 35 2.417719 GCCTCACTCGTCAAATTGTCT 58.582 47.619 0.00 0.00 0.00 3.41
35 36 1.464997 GGCCTCACTCGTCAAATTGTC 59.535 52.381 0.00 0.00 0.00 3.18
36 37 1.523758 GGCCTCACTCGTCAAATTGT 58.476 50.000 0.00 0.00 0.00 2.71
37 38 0.804989 GGGCCTCACTCGTCAAATTG 59.195 55.000 0.84 0.00 0.00 2.32
38 39 0.673644 CGGGCCTCACTCGTCAAATT 60.674 55.000 0.84 0.00 0.00 1.82
39 40 1.079127 CGGGCCTCACTCGTCAAAT 60.079 57.895 0.84 0.00 0.00 2.32
40 41 2.342279 CGGGCCTCACTCGTCAAA 59.658 61.111 0.84 0.00 0.00 2.69
41 42 4.373116 GCGGGCCTCACTCGTCAA 62.373 66.667 0.84 0.00 0.00 3.18
43 44 4.500116 GAGCGGGCCTCACTCGTC 62.500 72.222 0.84 0.00 40.45 4.20
46 47 2.543067 ATTTGGAGCGGGCCTCACTC 62.543 60.000 0.84 7.20 42.62 3.51
47 48 2.142292 AATTTGGAGCGGGCCTCACT 62.142 55.000 0.84 0.00 42.62 3.41
48 49 1.250840 AAATTTGGAGCGGGCCTCAC 61.251 55.000 0.84 0.00 42.62 3.51
49 50 0.965363 GAAATTTGGAGCGGGCCTCA 60.965 55.000 0.84 0.00 42.62 3.86
50 51 0.965363 TGAAATTTGGAGCGGGCCTC 60.965 55.000 0.84 0.00 39.98 4.70
51 52 0.541764 TTGAAATTTGGAGCGGGCCT 60.542 50.000 0.84 0.00 0.00 5.19
52 53 0.108662 CTTGAAATTTGGAGCGGGCC 60.109 55.000 0.00 0.00 0.00 5.80
53 54 0.603065 ACTTGAAATTTGGAGCGGGC 59.397 50.000 0.00 0.00 0.00 6.13
54 55 1.885887 TGACTTGAAATTTGGAGCGGG 59.114 47.619 0.00 0.00 0.00 6.13
55 56 3.855689 ATGACTTGAAATTTGGAGCGG 57.144 42.857 0.00 0.00 0.00 5.52
56 57 5.221880 TCAAATGACTTGAAATTTGGAGCG 58.778 37.500 0.00 0.00 41.21 5.03
67 68 6.072838 GCTTCTCAGATGTTCAAATGACTTGA 60.073 38.462 0.00 0.00 42.48 3.02
68 69 6.072618 AGCTTCTCAGATGTTCAAATGACTTG 60.073 38.462 0.00 0.00 36.25 3.16
69 70 6.002704 AGCTTCTCAGATGTTCAAATGACTT 58.997 36.000 0.00 0.00 0.00 3.01
70 71 5.558818 AGCTTCTCAGATGTTCAAATGACT 58.441 37.500 0.00 0.00 0.00 3.41
71 72 5.642919 AGAGCTTCTCAGATGTTCAAATGAC 59.357 40.000 7.10 0.00 32.06 3.06
72 73 5.802465 AGAGCTTCTCAGATGTTCAAATGA 58.198 37.500 7.10 0.00 32.06 2.57
73 74 6.109320 GAGAGCTTCTCAGATGTTCAAATG 57.891 41.667 7.10 0.00 42.90 2.32
104 105 8.622948 TTACTGTTTTGGTCCAATTTGTTTTT 57.377 26.923 4.80 0.00 0.00 1.94
105 106 8.508062 GTTTACTGTTTTGGTCCAATTTGTTTT 58.492 29.630 4.80 0.00 0.00 2.43
106 107 7.880713 AGTTTACTGTTTTGGTCCAATTTGTTT 59.119 29.630 4.80 0.00 0.00 2.83
107 108 7.390823 AGTTTACTGTTTTGGTCCAATTTGTT 58.609 30.769 4.80 0.00 0.00 2.83
108 109 6.941857 AGTTTACTGTTTTGGTCCAATTTGT 58.058 32.000 4.80 5.38 0.00 2.83
109 110 7.841915 AAGTTTACTGTTTTGGTCCAATTTG 57.158 32.000 4.80 0.00 0.00 2.32
110 111 8.856153 AAAAGTTTACTGTTTTGGTCCAATTT 57.144 26.923 4.80 0.00 0.00 1.82
111 112 8.856153 AAAAAGTTTACTGTTTTGGTCCAATT 57.144 26.923 4.80 0.00 29.41 2.32
133 134 3.388913 ACAAATTGGGGGTCTGGAAAAA 58.611 40.909 0.00 0.00 0.00 1.94
134 135 3.053359 ACAAATTGGGGGTCTGGAAAA 57.947 42.857 0.00 0.00 0.00 2.29
135 136 2.785357 ACAAATTGGGGGTCTGGAAA 57.215 45.000 0.00 0.00 0.00 3.13
136 137 4.412060 AATACAAATTGGGGGTCTGGAA 57.588 40.909 0.00 0.00 0.00 3.53
137 138 4.412060 AAATACAAATTGGGGGTCTGGA 57.588 40.909 0.00 0.00 0.00 3.86
138 139 5.497464 AAAAATACAAATTGGGGGTCTGG 57.503 39.130 0.00 0.00 0.00 3.86
157 158 5.649395 ACATATTAGCAGCTCTCAGCAAAAA 59.351 36.000 0.00 0.00 45.56 1.94
158 159 5.188434 ACATATTAGCAGCTCTCAGCAAAA 58.812 37.500 0.00 0.00 45.56 2.44
159 160 4.774124 ACATATTAGCAGCTCTCAGCAAA 58.226 39.130 0.00 0.00 45.56 3.68
160 161 4.412796 ACATATTAGCAGCTCTCAGCAA 57.587 40.909 0.00 0.00 45.56 3.91
161 162 4.141869 TGAACATATTAGCAGCTCTCAGCA 60.142 41.667 0.00 0.00 45.56 4.41
162 163 4.375272 TGAACATATTAGCAGCTCTCAGC 58.625 43.478 0.00 0.00 42.84 4.26
163 164 6.915544 TTTGAACATATTAGCAGCTCTCAG 57.084 37.500 0.00 0.00 0.00 3.35
164 165 7.011763 GTCATTTGAACATATTAGCAGCTCTCA 59.988 37.037 0.00 0.00 0.00 3.27
165 166 7.226325 AGTCATTTGAACATATTAGCAGCTCTC 59.774 37.037 0.00 0.00 0.00 3.20
166 167 7.052873 AGTCATTTGAACATATTAGCAGCTCT 58.947 34.615 0.00 0.00 0.00 4.09
167 168 7.256756 AGTCATTTGAACATATTAGCAGCTC 57.743 36.000 0.00 0.00 0.00 4.09
168 169 7.337689 TCAAGTCATTTGAACATATTAGCAGCT 59.662 33.333 0.00 0.00 42.69 4.24
169 170 7.475015 TCAAGTCATTTGAACATATTAGCAGC 58.525 34.615 0.00 0.00 42.69 5.25
182 183 5.221880 CGCTCCAAATTTCAAGTCATTTGA 58.778 37.500 6.25 0.00 43.92 2.69
183 184 4.386652 CCGCTCCAAATTTCAAGTCATTTG 59.613 41.667 0.00 0.00 39.25 2.32
184 185 4.559153 CCGCTCCAAATTTCAAGTCATTT 58.441 39.130 0.00 0.00 0.00 2.32
185 186 3.056607 CCCGCTCCAAATTTCAAGTCATT 60.057 43.478 0.00 0.00 0.00 2.57
186 187 2.493278 CCCGCTCCAAATTTCAAGTCAT 59.507 45.455 0.00 0.00 0.00 3.06
187 188 1.885887 CCCGCTCCAAATTTCAAGTCA 59.114 47.619 0.00 0.00 0.00 3.41
188 189 1.402852 GCCCGCTCCAAATTTCAAGTC 60.403 52.381 0.00 0.00 0.00 3.01
189 190 0.603065 GCCCGCTCCAAATTTCAAGT 59.397 50.000 0.00 0.00 0.00 3.16
190 191 0.108662 GGCCCGCTCCAAATTTCAAG 60.109 55.000 0.00 0.00 0.00 3.02
191 192 0.541764 AGGCCCGCTCCAAATTTCAA 60.542 50.000 0.00 0.00 0.00 2.69
192 193 0.965363 GAGGCCCGCTCCAAATTTCA 60.965 55.000 0.00 0.00 0.00 2.69
193 194 0.965363 TGAGGCCCGCTCCAAATTTC 60.965 55.000 0.00 0.00 0.00 2.17
194 195 1.076549 TGAGGCCCGCTCCAAATTT 59.923 52.632 0.00 0.00 0.00 1.82
195 196 1.678970 GTGAGGCCCGCTCCAAATT 60.679 57.895 0.00 0.00 0.00 1.82
196 197 2.044946 GTGAGGCCCGCTCCAAAT 60.045 61.111 0.00 0.00 0.00 2.32
197 198 4.697756 CGTGAGGCCCGCTCCAAA 62.698 66.667 0.00 0.00 0.00 3.28
204 205 1.656818 ATTTTGATGCGTGAGGCCCG 61.657 55.000 0.00 0.00 42.61 6.13
205 206 0.532115 AATTTTGATGCGTGAGGCCC 59.468 50.000 0.00 0.00 42.61 5.80
206 207 2.094545 AGAAATTTTGATGCGTGAGGCC 60.095 45.455 0.00 0.00 42.61 5.19
207 208 3.221964 AGAAATTTTGATGCGTGAGGC 57.778 42.857 0.00 0.00 43.96 4.70
208 209 4.662145 GGTAGAAATTTTGATGCGTGAGG 58.338 43.478 0.00 0.00 0.00 3.86
209 210 4.334443 CGGTAGAAATTTTGATGCGTGAG 58.666 43.478 0.00 0.00 0.00 3.51
210 211 3.425625 GCGGTAGAAATTTTGATGCGTGA 60.426 43.478 0.00 0.00 0.00 4.35
211 212 2.845967 GCGGTAGAAATTTTGATGCGTG 59.154 45.455 0.00 0.00 0.00 5.34
212 213 2.486203 TGCGGTAGAAATTTTGATGCGT 59.514 40.909 0.00 0.00 0.00 5.24
213 214 2.845967 GTGCGGTAGAAATTTTGATGCG 59.154 45.455 0.00 0.00 0.00 4.73
214 215 3.832276 TGTGCGGTAGAAATTTTGATGC 58.168 40.909 0.00 0.00 0.00 3.91
215 216 6.761731 TTTTGTGCGGTAGAAATTTTGATG 57.238 33.333 0.00 0.00 0.00 3.07
278 279 2.811431 CTGTACCCGTGCTGATGAAAAA 59.189 45.455 0.00 0.00 0.00 1.94
279 280 2.037902 TCTGTACCCGTGCTGATGAAAA 59.962 45.455 0.00 0.00 0.00 2.29
280 281 1.621317 TCTGTACCCGTGCTGATGAAA 59.379 47.619 0.00 0.00 0.00 2.69
281 282 1.262417 TCTGTACCCGTGCTGATGAA 58.738 50.000 0.00 0.00 0.00 2.57
282 283 1.136891 CATCTGTACCCGTGCTGATGA 59.863 52.381 20.46 0.92 46.42 2.92
283 284 1.136891 TCATCTGTACCCGTGCTGATG 59.863 52.381 19.60 19.60 45.60 3.07
284 285 1.410517 CTCATCTGTACCCGTGCTGAT 59.589 52.381 0.00 0.57 35.11 2.90
285 286 0.817654 CTCATCTGTACCCGTGCTGA 59.182 55.000 0.00 0.00 0.00 4.26
286 287 0.807667 GCTCATCTGTACCCGTGCTG 60.808 60.000 0.00 0.00 0.00 4.41
287 288 0.972983 AGCTCATCTGTACCCGTGCT 60.973 55.000 0.00 0.00 0.00 4.40
288 289 0.528684 GAGCTCATCTGTACCCGTGC 60.529 60.000 9.40 0.00 0.00 5.34
289 290 0.248661 CGAGCTCATCTGTACCCGTG 60.249 60.000 15.40 0.00 0.00 4.94
290 291 1.384989 CCGAGCTCATCTGTACCCGT 61.385 60.000 15.40 0.00 0.00 5.28
291 292 1.360551 CCGAGCTCATCTGTACCCG 59.639 63.158 15.40 0.00 0.00 5.28
292 293 1.043673 ACCCGAGCTCATCTGTACCC 61.044 60.000 15.40 0.00 0.00 3.69
293 294 0.103208 CACCCGAGCTCATCTGTACC 59.897 60.000 15.40 0.00 0.00 3.34
294 295 0.528684 GCACCCGAGCTCATCTGTAC 60.529 60.000 15.40 0.00 0.00 2.90
295 296 0.970427 TGCACCCGAGCTCATCTGTA 60.970 55.000 15.40 1.38 34.99 2.74
296 297 2.236223 CTGCACCCGAGCTCATCTGT 62.236 60.000 15.40 1.46 34.99 3.41
297 298 1.521010 CTGCACCCGAGCTCATCTG 60.521 63.158 15.40 5.86 34.99 2.90
298 299 1.674764 CTCTGCACCCGAGCTCATCT 61.675 60.000 15.40 0.00 34.99 2.90
299 300 1.227205 CTCTGCACCCGAGCTCATC 60.227 63.158 15.40 0.00 34.99 2.92
300 301 1.047596 ATCTCTGCACCCGAGCTCAT 61.048 55.000 15.40 0.00 34.99 2.90
301 302 1.683707 ATCTCTGCACCCGAGCTCA 60.684 57.895 15.40 0.00 34.99 4.26
302 303 1.227205 CATCTCTGCACCCGAGCTC 60.227 63.158 2.73 2.73 34.99 4.09
303 304 2.729479 CCATCTCTGCACCCGAGCT 61.729 63.158 0.00 0.00 34.99 4.09
304 305 2.037620 ATCCATCTCTGCACCCGAGC 62.038 60.000 0.00 0.00 0.00 5.03
305 306 0.467384 AATCCATCTCTGCACCCGAG 59.533 55.000 0.00 0.00 0.00 4.63
306 307 0.911769 AAATCCATCTCTGCACCCGA 59.088 50.000 0.00 0.00 0.00 5.14
307 308 1.672881 GAAAATCCATCTCTGCACCCG 59.327 52.381 0.00 0.00 0.00 5.28
308 309 1.672881 CGAAAATCCATCTCTGCACCC 59.327 52.381 0.00 0.00 0.00 4.61
309 310 1.064654 GCGAAAATCCATCTCTGCACC 59.935 52.381 0.00 0.00 0.00 5.01
310 311 1.064654 GGCGAAAATCCATCTCTGCAC 59.935 52.381 0.00 0.00 0.00 4.57
311 312 1.382522 GGCGAAAATCCATCTCTGCA 58.617 50.000 0.00 0.00 0.00 4.41
312 313 0.305922 CGGCGAAAATCCATCTCTGC 59.694 55.000 0.00 0.00 0.00 4.26
313 314 0.940126 CCGGCGAAAATCCATCTCTG 59.060 55.000 9.30 0.00 0.00 3.35
314 315 0.830648 TCCGGCGAAAATCCATCTCT 59.169 50.000 9.30 0.00 0.00 3.10
315 316 1.221414 CTCCGGCGAAAATCCATCTC 58.779 55.000 9.30 0.00 0.00 2.75
316 317 0.179045 CCTCCGGCGAAAATCCATCT 60.179 55.000 9.30 0.00 0.00 2.90
317 318 1.166531 CCCTCCGGCGAAAATCCATC 61.167 60.000 9.30 0.00 0.00 3.51
318 319 1.152963 CCCTCCGGCGAAAATCCAT 60.153 57.895 9.30 0.00 0.00 3.41
319 320 2.252072 CTCCCTCCGGCGAAAATCCA 62.252 60.000 9.30 0.00 0.00 3.41
320 321 1.523938 CTCCCTCCGGCGAAAATCC 60.524 63.158 9.30 0.00 0.00 3.01
321 322 0.462789 TACTCCCTCCGGCGAAAATC 59.537 55.000 9.30 0.00 0.00 2.17
322 323 0.177373 GTACTCCCTCCGGCGAAAAT 59.823 55.000 9.30 0.00 0.00 1.82
323 324 0.901580 AGTACTCCCTCCGGCGAAAA 60.902 55.000 9.30 0.00 0.00 2.29
324 325 1.304713 AGTACTCCCTCCGGCGAAA 60.305 57.895 9.30 0.00 0.00 3.46
325 326 2.050350 CAGTACTCCCTCCGGCGAA 61.050 63.158 9.30 0.00 0.00 4.70
326 327 1.913951 TACAGTACTCCCTCCGGCGA 61.914 60.000 9.30 0.00 0.00 5.54
327 328 0.822532 ATACAGTACTCCCTCCGGCG 60.823 60.000 0.00 0.00 0.00 6.46
328 329 2.283145 TATACAGTACTCCCTCCGGC 57.717 55.000 0.00 0.00 0.00 6.13
447 448 5.237048 ACAAACAAGTGCAACAACTCATTT 58.763 33.333 0.00 0.00 41.43 2.32
499 500 9.225201 CAGAATAAATTCGTCACCAACATATTG 57.775 33.333 0.00 0.00 41.56 1.90
505 506 5.873179 TCCAGAATAAATTCGTCACCAAC 57.127 39.130 0.00 0.00 41.56 3.77
509 510 6.899114 ACTTGTTCCAGAATAAATTCGTCAC 58.101 36.000 0.00 0.00 41.56 3.67
624 626 9.904647 CTTGTATTGTGTTGTGAAAATTTCAAG 57.095 29.630 10.27 0.00 42.15 3.02
769 2956 8.785329 TTTGCAGAAGGTTGTTTAGAATTTTT 57.215 26.923 0.00 0.00 0.00 1.94
770 2957 8.785329 TTTTGCAGAAGGTTGTTTAGAATTTT 57.215 26.923 0.00 0.00 0.00 1.82
771 2958 8.785329 TTTTTGCAGAAGGTTGTTTAGAATTT 57.215 26.923 0.00 0.00 0.00 1.82
813 3006 7.124147 GGAAAATATTTGTCTTGGGATTCTCCA 59.876 37.037 0.39 0.00 38.64 3.86
1160 3353 1.599576 GCTGGGGAGTGAGGAGAAC 59.400 63.158 0.00 0.00 0.00 3.01
1218 3411 6.208599 TGAAAAATCCTTAACTGCTTACCTGG 59.791 38.462 0.00 0.00 0.00 4.45
1278 3493 5.596361 TCTTGCAGTGATAAGAAACCCAAAA 59.404 36.000 7.55 0.00 30.49 2.44
1282 3497 5.649831 AGAATCTTGCAGTGATAAGAAACCC 59.350 40.000 12.44 4.94 36.59 4.11
1323 3546 3.183793 AGAAAAACAGCAAAGCCCAAG 57.816 42.857 0.00 0.00 0.00 3.61
1414 3637 4.467795 TGATCTATGCCTACCTTCTATGGC 59.532 45.833 0.00 0.00 45.10 4.40
1471 3698 6.530019 TTTCTGCCTTGTTTTCTCTTCTTT 57.470 33.333 0.00 0.00 0.00 2.52
1487 3715 7.969314 TGAACATTTTTAACTGTTTTTCTGCC 58.031 30.769 0.00 0.00 35.80 4.85
1522 3764 2.375174 TGCCTTTCTAGGGAGCTTTCAA 59.625 45.455 0.00 0.00 42.25 2.69
1568 3885 4.743057 AAGCCTTTTTGCAGAAAGAAGT 57.257 36.364 26.59 10.84 38.60 3.01
1605 3922 8.651588 CAGTTACATGCTCTTTAGTTTACTGAG 58.348 37.037 0.00 0.00 32.17 3.35
1608 3925 8.904099 AACAGTTACATGCTCTTTAGTTTACT 57.096 30.769 0.00 0.00 0.00 2.24
1640 3957 6.514947 ACACACATAAAACATCACTTGCAAT 58.485 32.000 0.00 0.00 0.00 3.56
1674 3995 9.136323 CTGCTTTTCCCCTTCATAGTAAATAAT 57.864 33.333 0.00 0.00 0.00 1.28
1675 3996 8.333235 TCTGCTTTTCCCCTTCATAGTAAATAA 58.667 33.333 0.00 0.00 0.00 1.40
1723 4044 3.078837 TCAATGCGTTTAGAAGGGGTTC 58.921 45.455 0.00 0.00 0.00 3.62
1797 4177 7.074653 ACACACTCTTCTAAATCCCTTACAA 57.925 36.000 0.00 0.00 0.00 2.41
1906 4287 0.036388 ACGGAGACATTGCCAACGAT 60.036 50.000 0.00 0.00 0.00 3.73
2136 4541 4.891566 GCGTGGTCGTGATTCTCT 57.108 55.556 0.00 0.00 39.49 3.10
2193 4598 4.697756 TCGCCGCCTTCAACCTGG 62.698 66.667 0.00 0.00 0.00 4.45
2301 4721 4.738998 TTGGCGCTGGGTCCCATG 62.739 66.667 12.23 8.55 30.82 3.66
2416 4836 2.514592 TGGGCTAATCTGCGCTGC 60.515 61.111 9.73 3.28 44.66 5.25
2427 4847 4.752879 GGCGCGTCTTGTGGGCTA 62.753 66.667 8.43 0.00 43.97 3.93
2466 4886 3.415186 GGGGGATTCTGACTGGCA 58.585 61.111 0.00 0.00 0.00 4.92
2523 4943 0.398664 AGTAGCCCGGGTAGCTCATT 60.399 55.000 24.63 0.00 41.83 2.57
2667 5087 1.064654 GCCGTTGAGTAGTAGTACCCG 59.935 57.143 4.02 2.67 0.00 5.28
2810 5230 8.082242 ACCAGCTAAAGTTGCTTAAATTACAAG 58.918 33.333 0.00 0.00 38.92 3.16
2834 6757 4.572389 CAGCAAGATGACCATACTAACACC 59.428 45.833 0.00 0.00 0.00 4.16
2913 6836 0.388659 TGGTTGACACAGCCAATTGC 59.611 50.000 0.00 0.00 41.55 3.56
2939 6862 0.865111 TCAACTCGCAACATTGACCG 59.135 50.000 0.00 0.00 0.00 4.79
2977 6900 2.152830 TCAAATTGCCAAAGCCAATGC 58.847 42.857 0.00 0.00 38.69 3.56
2983 6906 2.164219 TCCGATCTCAAATTGCCAAAGC 59.836 45.455 0.00 0.00 40.48 3.51
3024 6947 3.825908 AGTGGCATTTTTCTCCCCTAA 57.174 42.857 0.00 0.00 0.00 2.69
3038 6964 1.412079 AAGCACAAATGGAAGTGGCA 58.588 45.000 0.00 0.00 36.29 4.92
3042 6968 4.942761 ATCACAAAGCACAAATGGAAGT 57.057 36.364 0.00 0.00 0.00 3.01
3046 6972 3.426191 CACGAATCACAAAGCACAAATGG 59.574 43.478 0.00 0.00 0.00 3.16
3055 6981 2.987149 ACTAGTCGCACGAATCACAAAG 59.013 45.455 0.00 0.00 0.00 2.77
3060 6992 0.242555 TGCACTAGTCGCACGAATCA 59.757 50.000 13.71 0.00 33.55 2.57
3084 7016 5.068987 ACCTCGGCATAAAATGTATTGCAAT 59.931 36.000 17.56 17.56 36.82 3.56
3096 7028 3.627395 ATGAGAACACCTCGGCATAAA 57.373 42.857 0.00 0.00 44.92 1.40
3099 7031 1.679944 CCAATGAGAACACCTCGGCAT 60.680 52.381 0.00 0.00 44.92 4.40
3100 7032 0.321564 CCAATGAGAACACCTCGGCA 60.322 55.000 0.00 0.00 44.92 5.69
3102 7034 0.392998 CCCCAATGAGAACACCTCGG 60.393 60.000 0.00 0.00 44.92 4.63
3103 7035 0.392998 CCCCCAATGAGAACACCTCG 60.393 60.000 0.00 0.00 44.92 4.63
3117 7099 0.486879 AGATTGCAAAGGAACCCCCA 59.513 50.000 1.71 0.00 37.41 4.96
3132 7114 4.679373 ATCATGCCGACACTTCTAGATT 57.321 40.909 0.00 0.00 0.00 2.40
3147 7129 5.359716 TTTCCAAATTGCAACAATCATGC 57.640 34.783 0.00 0.00 44.08 4.06
3205 7187 5.643348 CACATGTGGACTACTCATAAAGCAA 59.357 40.000 18.51 0.00 0.00 3.91
3236 7218 5.906285 CGAAAAACGGTAAAAACGGATACAA 59.094 36.000 0.00 0.00 38.46 2.41
3260 7242 7.391148 TGAAGAGAATTGCCCTGTTATTTAC 57.609 36.000 0.00 0.00 0.00 2.01
3269 7252 8.650143 TTAATTTAGTTGAAGAGAATTGCCCT 57.350 30.769 0.00 0.00 0.00 5.19
3369 7353 5.485620 AGTATACATATGCATGCCACTCAG 58.514 41.667 16.68 2.81 35.39 3.35
3374 7358 6.532826 TCTTTGAGTATACATATGCATGCCA 58.467 36.000 16.68 2.95 35.39 4.92
3376 7360 8.944029 AGAATCTTTGAGTATACATATGCATGC 58.056 33.333 11.82 11.82 35.39 4.06
3407 7391 0.607620 ATGCATGGGGTTTGGTTTCG 59.392 50.000 0.00 0.00 0.00 3.46
3659 7651 6.852853 CGGGAGTGAAATAAATGATCAAATCG 59.147 38.462 0.00 0.00 0.00 3.34
3660 7652 7.707104 ACGGGAGTGAAATAAATGATCAAATC 58.293 34.615 0.00 0.00 44.82 2.17
3681 7673 2.781681 AGGGAGTATGAAACAACGGG 57.218 50.000 0.00 0.00 0.00 5.28
3696 7688 7.909485 AGACTTATATTTAGGAACGAAGGGA 57.091 36.000 0.00 0.00 0.00 4.20
3697 7689 8.959705 AAAGACTTATATTTAGGAACGAAGGG 57.040 34.615 0.00 0.00 0.00 3.95
3725 7717 8.708378 TGTGTAGTCCATATTGATGAAATCTCT 58.292 33.333 0.00 0.00 45.81 3.10
3726 7718 8.768955 GTGTGTAGTCCATATTGATGAAATCTC 58.231 37.037 0.00 0.00 45.81 2.75
3727 7719 7.439356 CGTGTGTAGTCCATATTGATGAAATCT 59.561 37.037 0.00 0.00 45.81 2.40
3728 7720 7.307396 CCGTGTGTAGTCCATATTGATGAAATC 60.307 40.741 0.00 0.00 45.83 2.17
3729 7721 6.483307 CCGTGTGTAGTCCATATTGATGAAAT 59.517 38.462 0.00 0.00 34.73 2.17
3730 7722 5.815222 CCGTGTGTAGTCCATATTGATGAAA 59.185 40.000 0.00 0.00 34.73 2.69
3731 7723 5.128008 TCCGTGTGTAGTCCATATTGATGAA 59.872 40.000 0.00 0.00 34.73 2.57
3732 7724 4.647399 TCCGTGTGTAGTCCATATTGATGA 59.353 41.667 0.00 0.00 34.73 2.92
3733 7725 4.944048 TCCGTGTGTAGTCCATATTGATG 58.056 43.478 0.00 0.00 0.00 3.07
3734 7726 5.541845 CATCCGTGTGTAGTCCATATTGAT 58.458 41.667 0.00 0.00 0.00 2.57
3735 7727 4.739436 GCATCCGTGTGTAGTCCATATTGA 60.739 45.833 0.00 0.00 0.00 2.57
3736 7728 3.494626 GCATCCGTGTGTAGTCCATATTG 59.505 47.826 0.00 0.00 0.00 1.90
3737 7729 3.133901 TGCATCCGTGTGTAGTCCATATT 59.866 43.478 0.00 0.00 0.00 1.28
3738 7730 2.698274 TGCATCCGTGTGTAGTCCATAT 59.302 45.455 0.00 0.00 0.00 1.78
3739 7731 2.104170 TGCATCCGTGTGTAGTCCATA 58.896 47.619 0.00 0.00 0.00 2.74
3740 7732 0.901827 TGCATCCGTGTGTAGTCCAT 59.098 50.000 0.00 0.00 0.00 3.41
3741 7733 0.901827 ATGCATCCGTGTGTAGTCCA 59.098 50.000 0.00 0.00 0.00 4.02
3742 7734 3.760693 ATGCATCCGTGTGTAGTCC 57.239 52.632 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.