Multiple sequence alignment - TraesCS1A01G090200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G090200 chr1A 100.000 2788 0 0 1 2788 80284651 80281864 0.000000e+00 5149.0
1 TraesCS1A01G090200 chr5D 94.526 1425 48 6 945 2339 538687215 538688639 0.000000e+00 2172.0
2 TraesCS1A01G090200 chr5D 96.943 916 27 1 1 915 538686303 538687218 0.000000e+00 1535.0
3 TraesCS1A01G090200 chr5D 92.222 450 31 3 2340 2788 67652644 67652198 3.920000e-178 634.0
4 TraesCS1A01G090200 chr4A 92.572 1427 70 20 945 2338 629935714 629937137 0.000000e+00 2015.0
5 TraesCS1A01G090200 chr4A 85.624 1419 144 26 978 2339 117699943 117701358 0.000000e+00 1435.0
6 TraesCS1A01G090200 chr4A 94.432 449 23 2 2340 2788 195372136 195372582 0.000000e+00 689.0
7 TraesCS1A01G090200 chr4A 91.982 449 34 2 2340 2788 492596344 492595898 1.820000e-176 628.0
8 TraesCS1A01G090200 chr4A 91.150 226 20 0 727 952 629935449 629935674 9.700000e-80 307.0
9 TraesCS1A01G090200 chr4D 93.713 1336 53 16 1039 2343 145379903 145378568 0.000000e+00 1973.0
10 TraesCS1A01G090200 chr4D 89.941 1024 90 6 1005 2021 348041064 348040047 0.000000e+00 1308.0
11 TraesCS1A01G090200 chr4D 91.982 449 32 4 2340 2788 112959110 112958666 6.560000e-176 627.0
12 TraesCS1A01G090200 chr2B 87.854 1449 134 21 550 1992 358757890 358759302 0.000000e+00 1663.0
13 TraesCS1A01G090200 chr2B 93.843 1072 66 0 944 2015 54562696 54561625 0.000000e+00 1615.0
14 TraesCS1A01G090200 chr2B 93.211 928 57 2 1 927 54563602 54562680 0.000000e+00 1360.0
15 TraesCS1A01G090200 chr3B 87.308 1434 140 32 948 2347 592330400 592328975 0.000000e+00 1602.0
16 TraesCS1A01G090200 chr3B 84.248 419 43 15 1927 2342 576053354 576052956 1.210000e-103 387.0
17 TraesCS1A01G090200 chr7A 96.541 954 31 2 1 952 62735359 62736312 0.000000e+00 1578.0
18 TraesCS1A01G090200 chr7A 85.542 415 35 14 1931 2343 211154162 211154553 7.190000e-111 411.0
19 TraesCS1A01G090200 chr7A 90.566 53 4 1 1997 2048 211154172 211154224 4.980000e-08 69.4
20 TraesCS1A01G090200 chr5A 95.079 955 45 2 1 954 78448583 78449536 0.000000e+00 1502.0
21 TraesCS1A01G090200 chr5A 88.643 361 26 7 1997 2342 78449944 78450304 2.570000e-115 425.0
22 TraesCS1A01G090200 chr1D 95.961 916 35 2 1 915 80673842 80674756 0.000000e+00 1485.0
23 TraesCS1A01G090200 chr1D 94.428 341 19 0 1997 2337 80684627 80684967 2.460000e-145 525.0
24 TraesCS1A01G090200 chr4B 87.972 1272 130 15 727 1992 449518686 449519940 0.000000e+00 1480.0
25 TraesCS1A01G090200 chr4B 87.578 958 90 11 1 954 449517901 449518833 0.000000e+00 1083.0
26 TraesCS1A01G090200 chr4B 88.858 359 26 8 1997 2343 413506588 413506232 1.980000e-116 429.0
27 TraesCS1A01G090200 chr4B 87.013 231 26 4 727 954 428198079 428197850 9.910000e-65 257.0
28 TraesCS1A01G090200 chr6A 87.260 1303 141 16 727 2021 571574668 571575953 0.000000e+00 1463.0
29 TraesCS1A01G090200 chr3D 90.219 1094 99 7 934 2021 339817233 339818324 0.000000e+00 1421.0
30 TraesCS1A01G090200 chr3D 91.730 919 53 12 1 916 339816353 339817251 0.000000e+00 1254.0
31 TraesCS1A01G090200 chr3D 93.080 448 26 4 2341 2788 363294698 363295140 0.000000e+00 651.0
32 TraesCS1A01G090200 chr3D 92.274 453 32 3 2336 2788 397002459 397002908 8.420000e-180 640.0
33 TraesCS1A01G090200 chr3D 92.428 449 31 2 2340 2788 379378047 379378492 3.030000e-179 638.0
34 TraesCS1A01G090200 chrUn 89.660 735 68 7 1 731 96552655 96553385 0.000000e+00 929.0
35 TraesCS1A01G090200 chrUn 87.123 365 31 8 1997 2345 47391622 47391986 1.560000e-107 399.0
36 TraesCS1A01G090200 chr2D 89.538 736 68 7 1 731 469108356 469107625 0.000000e+00 924.0
37 TraesCS1A01G090200 chr2D 91.832 453 34 2 2336 2788 144882545 144882096 1.820000e-176 628.0
38 TraesCS1A01G090200 chr2A 93.764 449 27 1 2340 2788 473624609 473624162 0.000000e+00 673.0
39 TraesCS1A01G090200 chr7D 92.832 279 17 2 2060 2338 78508520 78508795 4.330000e-108 401.0
40 TraesCS1A01G090200 chr7B 94.231 52 3 0 1997 2048 269096235 269096184 2.300000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G090200 chr1A 80281864 80284651 2787 True 5149.0 5149 100.0000 1 2788 1 chr1A.!!$R1 2787
1 TraesCS1A01G090200 chr5D 538686303 538688639 2336 False 1853.5 2172 95.7345 1 2339 2 chr5D.!!$F1 2338
2 TraesCS1A01G090200 chr4A 117699943 117701358 1415 False 1435.0 1435 85.6240 978 2339 1 chr4A.!!$F1 1361
3 TraesCS1A01G090200 chr4A 629935449 629937137 1688 False 1161.0 2015 91.8610 727 2338 2 chr4A.!!$F3 1611
4 TraesCS1A01G090200 chr4D 145378568 145379903 1335 True 1973.0 1973 93.7130 1039 2343 1 chr4D.!!$R2 1304
5 TraesCS1A01G090200 chr4D 348040047 348041064 1017 True 1308.0 1308 89.9410 1005 2021 1 chr4D.!!$R3 1016
6 TraesCS1A01G090200 chr2B 358757890 358759302 1412 False 1663.0 1663 87.8540 550 1992 1 chr2B.!!$F1 1442
7 TraesCS1A01G090200 chr2B 54561625 54563602 1977 True 1487.5 1615 93.5270 1 2015 2 chr2B.!!$R1 2014
8 TraesCS1A01G090200 chr3B 592328975 592330400 1425 True 1602.0 1602 87.3080 948 2347 1 chr3B.!!$R2 1399
9 TraesCS1A01G090200 chr7A 62735359 62736312 953 False 1578.0 1578 96.5410 1 952 1 chr7A.!!$F1 951
10 TraesCS1A01G090200 chr5A 78448583 78450304 1721 False 963.5 1502 91.8610 1 2342 2 chr5A.!!$F1 2341
11 TraesCS1A01G090200 chr1D 80673842 80674756 914 False 1485.0 1485 95.9610 1 915 1 chr1D.!!$F1 914
12 TraesCS1A01G090200 chr4B 449517901 449519940 2039 False 1281.5 1480 87.7750 1 1992 2 chr4B.!!$F1 1991
13 TraesCS1A01G090200 chr6A 571574668 571575953 1285 False 1463.0 1463 87.2600 727 2021 1 chr6A.!!$F1 1294
14 TraesCS1A01G090200 chr3D 339816353 339818324 1971 False 1337.5 1421 90.9745 1 2021 2 chr3D.!!$F4 2020
15 TraesCS1A01G090200 chrUn 96552655 96553385 730 False 929.0 929 89.6600 1 731 1 chrUn.!!$F2 730
16 TraesCS1A01G090200 chr2D 469107625 469108356 731 True 924.0 924 89.5380 1 731 1 chr2D.!!$R2 730

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
778 945 1.876799 TGTGATGTTTGGGCAACTACG 59.123 47.619 0.0 0.0 36.21 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2694 3091 0.031414 ACCTCGCCCTTGGTACCTAT 60.031 55.0 14.36 0.0 34.36 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
378 384 6.953520 ACAATCCAGTCCAAAATGATAAGGAA 59.046 34.615 0.00 0.00 0.00 3.36
413 419 6.939292 TAGGCACTCTTCACTACGGGTGAT 62.939 50.000 12.85 0.00 46.96 3.06
486 492 6.825610 TGATGCCAAACCATTCTTTACTTTT 58.174 32.000 0.00 0.00 0.00 2.27
501 507 6.540914 TCTTTACTTTTCCGACACAAGTTGAT 59.459 34.615 10.54 0.00 32.88 2.57
642 648 4.104420 AGTGATACTAGGGTCGTGGTAGAT 59.896 45.833 0.00 0.00 0.00 1.98
778 945 1.876799 TGTGATGTTTGGGCAACTACG 59.123 47.619 0.00 0.00 36.21 3.51
818 986 6.057533 TGGCTGGACAGATTGTATCATTTAG 58.942 40.000 3.00 0.00 0.00 1.85
851 1100 4.761739 ACCATGTACTTGTGATGTTTGGAG 59.238 41.667 7.86 0.00 0.00 3.86
888 1137 8.537728 AATTTATTTGATGGCTGGACAGATTA 57.462 30.769 3.00 0.00 0.00 1.75
928 1177 6.070897 TGAACCATGTACTTGTGATGTTTG 57.929 37.500 7.86 0.00 0.00 2.93
929 1178 5.009510 TGAACCATGTACTTGTGATGTTTGG 59.990 40.000 7.86 0.00 0.00 3.28
930 1179 4.724399 ACCATGTACTTGTGATGTTTGGA 58.276 39.130 7.86 0.00 0.00 3.53
931 1180 4.761739 ACCATGTACTTGTGATGTTTGGAG 59.238 41.667 7.86 0.00 0.00 3.86
934 1183 6.373779 CATGTACTTGTGATGTTTGGAGAAC 58.626 40.000 0.62 0.00 0.00 3.01
1070 1378 5.527385 TGGGATCATTGTATGGACCAATTT 58.473 37.500 0.00 0.00 30.28 1.82
1084 1392 3.896122 ACCAATTTGATGACGAAAACCG 58.104 40.909 0.00 0.00 45.44 4.44
1196 1505 4.305989 TGAACGAGCAATTCAAGCTTTT 57.694 36.364 0.00 0.00 43.58 2.27
1235 1544 6.625873 AGTCAAAAACCATCTCAAGAAGTC 57.374 37.500 0.00 0.00 0.00 3.01
1293 1608 7.051000 AGAATTTAAGTGAAGCTCTATGGGAC 58.949 38.462 0.00 0.00 0.00 4.46
1651 1968 3.798202 AGAAGGCTAAGATAAAGCACGG 58.202 45.455 0.00 0.00 41.93 4.94
1863 2187 4.640771 AGAGCCTTCATGAAACTTACCA 57.359 40.909 9.88 0.00 0.00 3.25
2024 2392 5.292101 GTGAACTTGACATGTATGGCTCTAC 59.708 44.000 0.00 0.00 36.54 2.59
2162 2557 7.874016 TCTTGAAAATACAAATGAAATGCTGCT 59.126 29.630 0.00 0.00 0.00 4.24
2218 2615 2.426738 CTGTTCTTCCAACCAAACAGCA 59.573 45.455 1.62 0.00 41.31 4.41
2251 2648 1.130613 CGTTCCGCTCTTTTGCTCG 59.869 57.895 0.00 0.00 0.00 5.03
2263 2660 3.880490 TCTTTTGCTCGTACCAAACACAT 59.120 39.130 0.00 0.00 32.40 3.21
2287 2684 1.273381 TGGAACGGACCCATTCCTCTA 60.273 52.381 18.67 1.59 44.13 2.43
2344 2741 3.134804 CCCAACCAAACACACCCATAAAA 59.865 43.478 0.00 0.00 0.00 1.52
2345 2742 4.202409 CCCAACCAAACACACCCATAAAAT 60.202 41.667 0.00 0.00 0.00 1.82
2346 2743 5.012148 CCCAACCAAACACACCCATAAAATA 59.988 40.000 0.00 0.00 0.00 1.40
2347 2744 5.929415 CCAACCAAACACACCCATAAAATAC 59.071 40.000 0.00 0.00 0.00 1.89
2348 2745 6.463049 CCAACCAAACACACCCATAAAATACA 60.463 38.462 0.00 0.00 0.00 2.29
2349 2746 6.926630 ACCAAACACACCCATAAAATACAT 57.073 33.333 0.00 0.00 0.00 2.29
2350 2747 6.930731 ACCAAACACACCCATAAAATACATC 58.069 36.000 0.00 0.00 0.00 3.06
2351 2748 6.033341 CCAAACACACCCATAAAATACATCG 58.967 40.000 0.00 0.00 0.00 3.84
2352 2749 6.127869 CCAAACACACCCATAAAATACATCGA 60.128 38.462 0.00 0.00 0.00 3.59
2353 2750 6.677781 AACACACCCATAAAATACATCGAG 57.322 37.500 0.00 0.00 0.00 4.04
2354 2751 5.984725 ACACACCCATAAAATACATCGAGA 58.015 37.500 0.00 0.00 0.00 4.04
2355 2752 6.049149 ACACACCCATAAAATACATCGAGAG 58.951 40.000 0.00 0.00 0.00 3.20
2356 2753 6.049149 CACACCCATAAAATACATCGAGAGT 58.951 40.000 0.00 0.00 0.00 3.24
2357 2754 7.147794 ACACACCCATAAAATACATCGAGAGTA 60.148 37.037 3.36 3.36 0.00 2.59
2358 2755 7.709182 CACACCCATAAAATACATCGAGAGTAA 59.291 37.037 4.83 0.00 0.00 2.24
2359 2756 7.926555 ACACCCATAAAATACATCGAGAGTAAG 59.073 37.037 4.83 0.00 0.00 2.34
2360 2757 7.385205 CACCCATAAAATACATCGAGAGTAAGG 59.615 40.741 4.83 0.00 0.00 2.69
2361 2758 7.070821 ACCCATAAAATACATCGAGAGTAAGGT 59.929 37.037 4.83 0.00 0.00 3.50
2362 2759 8.582437 CCCATAAAATACATCGAGAGTAAGGTA 58.418 37.037 4.83 0.00 0.00 3.08
2369 2766 8.937207 ATACATCGAGAGTAAGGTATAAAGGT 57.063 34.615 4.83 0.00 0.00 3.50
2371 2768 8.164058 ACATCGAGAGTAAGGTATAAAGGTAC 57.836 38.462 0.00 0.00 0.00 3.34
2372 2769 7.776969 ACATCGAGAGTAAGGTATAAAGGTACA 59.223 37.037 0.00 0.00 0.00 2.90
2373 2770 8.627403 CATCGAGAGTAAGGTATAAAGGTACAA 58.373 37.037 0.00 0.00 0.00 2.41
2374 2771 8.757982 TCGAGAGTAAGGTATAAAGGTACAAT 57.242 34.615 0.00 0.00 0.00 2.71
2375 2772 9.851686 TCGAGAGTAAGGTATAAAGGTACAATA 57.148 33.333 0.00 0.00 0.00 1.90
2384 2781 9.690913 AGGTATAAAGGTACAATAAAAGGTTCC 57.309 33.333 0.00 0.00 0.00 3.62
2385 2782 9.465199 GGTATAAAGGTACAATAAAAGGTTCCA 57.535 33.333 0.00 0.00 0.00 3.53
2388 2785 5.977489 AGGTACAATAAAAGGTTCCAAGC 57.023 39.130 0.00 0.00 0.00 4.01
2389 2786 4.457949 AGGTACAATAAAAGGTTCCAAGCG 59.542 41.667 0.00 0.00 0.00 4.68
2390 2787 3.934457 ACAATAAAAGGTTCCAAGCGG 57.066 42.857 0.00 0.00 0.00 5.52
2391 2788 3.492337 ACAATAAAAGGTTCCAAGCGGA 58.508 40.909 0.00 0.00 40.60 5.54
2392 2789 4.086457 ACAATAAAAGGTTCCAAGCGGAT 58.914 39.130 0.00 0.00 42.41 4.18
2393 2790 5.258051 ACAATAAAAGGTTCCAAGCGGATA 58.742 37.500 0.00 0.00 42.41 2.59
2394 2791 5.357032 ACAATAAAAGGTTCCAAGCGGATAG 59.643 40.000 0.00 0.00 42.41 2.08
2395 2792 3.713826 AAAAGGTTCCAAGCGGATAGA 57.286 42.857 0.00 0.00 42.41 1.98
2396 2793 3.933861 AAAGGTTCCAAGCGGATAGAT 57.066 42.857 0.00 0.00 42.41 1.98
2397 2794 5.367945 AAAAGGTTCCAAGCGGATAGATA 57.632 39.130 0.00 0.00 42.41 1.98
2398 2795 4.608948 AAGGTTCCAAGCGGATAGATAG 57.391 45.455 0.00 0.00 42.41 2.08
2399 2796 3.577919 AGGTTCCAAGCGGATAGATAGT 58.422 45.455 0.00 0.00 42.41 2.12
2400 2797 3.967987 AGGTTCCAAGCGGATAGATAGTT 59.032 43.478 0.00 0.00 42.41 2.24
2401 2798 4.058817 GGTTCCAAGCGGATAGATAGTTG 58.941 47.826 0.00 0.00 42.41 3.16
2402 2799 3.386768 TCCAAGCGGATAGATAGTTGC 57.613 47.619 0.00 0.00 35.91 4.17
2403 2800 2.965831 TCCAAGCGGATAGATAGTTGCT 59.034 45.455 0.00 0.00 35.91 3.91
2404 2801 3.005897 TCCAAGCGGATAGATAGTTGCTC 59.994 47.826 0.00 0.00 35.91 4.26
2405 2802 2.983136 CAAGCGGATAGATAGTTGCTCG 59.017 50.000 0.00 0.00 0.00 5.03
2406 2803 2.505405 AGCGGATAGATAGTTGCTCGA 58.495 47.619 0.00 0.00 0.00 4.04
2407 2804 2.885266 AGCGGATAGATAGTTGCTCGAA 59.115 45.455 0.00 0.00 0.00 3.71
2408 2805 3.057876 AGCGGATAGATAGTTGCTCGAAG 60.058 47.826 0.00 0.00 0.00 3.79
2409 2806 3.304794 GCGGATAGATAGTTGCTCGAAGT 60.305 47.826 0.00 0.00 0.00 3.01
2410 2807 4.468643 CGGATAGATAGTTGCTCGAAGTC 58.531 47.826 0.00 0.00 0.00 3.01
2411 2808 4.214545 CGGATAGATAGTTGCTCGAAGTCT 59.785 45.833 0.00 0.00 0.00 3.24
2412 2809 5.457140 GGATAGATAGTTGCTCGAAGTCTG 58.543 45.833 0.00 0.00 0.00 3.51
2413 2810 5.239744 GGATAGATAGTTGCTCGAAGTCTGA 59.760 44.000 0.00 0.00 0.00 3.27
2414 2811 6.238786 GGATAGATAGTTGCTCGAAGTCTGAA 60.239 42.308 0.00 0.00 0.00 3.02
2415 2812 4.739195 AGATAGTTGCTCGAAGTCTGAAC 58.261 43.478 0.00 0.00 0.00 3.18
2416 2813 2.156343 AGTTGCTCGAAGTCTGAACC 57.844 50.000 0.00 0.00 0.00 3.62
2417 2814 1.412710 AGTTGCTCGAAGTCTGAACCA 59.587 47.619 0.00 0.00 0.00 3.67
2418 2815 1.795286 GTTGCTCGAAGTCTGAACCAG 59.205 52.381 0.00 0.00 0.00 4.00
2419 2816 1.328279 TGCTCGAAGTCTGAACCAGA 58.672 50.000 0.00 0.00 38.25 3.86
2420 2817 1.270826 TGCTCGAAGTCTGAACCAGAG 59.729 52.381 0.00 0.00 41.46 3.35
2421 2818 1.271102 GCTCGAAGTCTGAACCAGAGT 59.729 52.381 0.00 0.00 44.91 3.24
2422 2819 2.924454 GCTCGAAGTCTGAACCAGAGTG 60.924 54.545 5.20 0.00 42.55 3.51
2423 2820 2.554462 CTCGAAGTCTGAACCAGAGTGA 59.446 50.000 5.20 0.00 42.55 3.41
2424 2821 2.554462 TCGAAGTCTGAACCAGAGTGAG 59.446 50.000 5.20 3.60 42.55 3.51
2425 2822 2.554462 CGAAGTCTGAACCAGAGTGAGA 59.446 50.000 5.20 0.00 42.55 3.27
2426 2823 3.004839 CGAAGTCTGAACCAGAGTGAGAA 59.995 47.826 5.20 0.00 42.55 2.87
2427 2824 4.499865 CGAAGTCTGAACCAGAGTGAGAAA 60.500 45.833 5.20 0.00 42.55 2.52
2428 2825 5.359194 AAGTCTGAACCAGAGTGAGAAAA 57.641 39.130 5.20 0.00 42.55 2.29
2429 2826 4.954875 AGTCTGAACCAGAGTGAGAAAAG 58.045 43.478 3.71 0.00 41.89 2.27
2430 2827 4.061596 GTCTGAACCAGAGTGAGAAAAGG 58.938 47.826 0.00 0.00 41.46 3.11
2431 2828 3.071602 TCTGAACCAGAGTGAGAAAAGGG 59.928 47.826 0.00 0.00 35.39 3.95
2432 2829 2.106511 TGAACCAGAGTGAGAAAAGGGG 59.893 50.000 0.00 0.00 0.00 4.79
2433 2830 1.068121 ACCAGAGTGAGAAAAGGGGG 58.932 55.000 0.00 0.00 0.00 5.40
2434 2831 1.068121 CCAGAGTGAGAAAAGGGGGT 58.932 55.000 0.00 0.00 0.00 4.95
2435 2832 1.425448 CCAGAGTGAGAAAAGGGGGTT 59.575 52.381 0.00 0.00 0.00 4.11
2436 2833 2.553247 CCAGAGTGAGAAAAGGGGGTTC 60.553 54.545 0.00 0.00 0.00 3.62
2437 2834 2.106511 CAGAGTGAGAAAAGGGGGTTCA 59.893 50.000 0.00 0.00 0.00 3.18
2438 2835 2.373502 AGAGTGAGAAAAGGGGGTTCAG 59.626 50.000 0.00 0.00 0.00 3.02
2439 2836 2.372172 GAGTGAGAAAAGGGGGTTCAGA 59.628 50.000 0.00 0.00 0.00 3.27
2440 2837 2.373502 AGTGAGAAAAGGGGGTTCAGAG 59.626 50.000 0.00 0.00 0.00 3.35
2441 2838 1.073923 TGAGAAAAGGGGGTTCAGAGC 59.926 52.381 0.00 0.00 0.00 4.09
2442 2839 1.073923 GAGAAAAGGGGGTTCAGAGCA 59.926 52.381 0.00 0.00 0.00 4.26
2443 2840 1.074566 AGAAAAGGGGGTTCAGAGCAG 59.925 52.381 0.00 0.00 0.00 4.24
2444 2841 0.540597 AAAAGGGGGTTCAGAGCAGC 60.541 55.000 0.00 0.00 0.00 5.25
2445 2842 2.754664 AAAGGGGGTTCAGAGCAGCG 62.755 60.000 0.00 0.00 0.00 5.18
2446 2843 3.706373 GGGGGTTCAGAGCAGCGA 61.706 66.667 0.00 0.00 0.00 4.93
2447 2844 2.125350 GGGGTTCAGAGCAGCGAG 60.125 66.667 0.00 0.00 0.00 5.03
2448 2845 2.650116 GGGGTTCAGAGCAGCGAGA 61.650 63.158 0.00 0.00 0.00 4.04
2449 2846 1.153667 GGGTTCAGAGCAGCGAGAG 60.154 63.158 0.00 0.00 0.00 3.20
2450 2847 1.589113 GGTTCAGAGCAGCGAGAGT 59.411 57.895 0.00 0.00 0.00 3.24
2451 2848 0.811915 GGTTCAGAGCAGCGAGAGTA 59.188 55.000 0.00 0.00 0.00 2.59
2452 2849 1.202582 GGTTCAGAGCAGCGAGAGTAA 59.797 52.381 0.00 0.00 0.00 2.24
2453 2850 2.525055 GTTCAGAGCAGCGAGAGTAAG 58.475 52.381 0.00 0.00 0.00 2.34
2454 2851 1.827681 TCAGAGCAGCGAGAGTAAGT 58.172 50.000 0.00 0.00 0.00 2.24
2455 2852 2.987232 TCAGAGCAGCGAGAGTAAGTA 58.013 47.619 0.00 0.00 0.00 2.24
2456 2853 3.546724 TCAGAGCAGCGAGAGTAAGTAT 58.453 45.455 0.00 0.00 0.00 2.12
2457 2854 3.948473 TCAGAGCAGCGAGAGTAAGTATT 59.052 43.478 0.00 0.00 0.00 1.89
2458 2855 4.041049 CAGAGCAGCGAGAGTAAGTATTG 58.959 47.826 0.00 0.00 0.00 1.90
2459 2856 3.697045 AGAGCAGCGAGAGTAAGTATTGT 59.303 43.478 0.00 0.00 0.00 2.71
2460 2857 3.775202 AGCAGCGAGAGTAAGTATTGTG 58.225 45.455 0.00 0.00 0.00 3.33
2461 2858 3.193691 AGCAGCGAGAGTAAGTATTGTGT 59.806 43.478 0.00 0.00 0.00 3.72
2462 2859 4.398358 AGCAGCGAGAGTAAGTATTGTGTA 59.602 41.667 0.00 0.00 0.00 2.90
2463 2860 5.067936 AGCAGCGAGAGTAAGTATTGTGTAT 59.932 40.000 0.00 0.00 0.00 2.29
2464 2861 5.174035 GCAGCGAGAGTAAGTATTGTGTATG 59.826 44.000 0.00 0.00 0.00 2.39
2465 2862 6.495706 CAGCGAGAGTAAGTATTGTGTATGA 58.504 40.000 0.00 0.00 0.00 2.15
2466 2863 7.142021 CAGCGAGAGTAAGTATTGTGTATGAT 58.858 38.462 0.00 0.00 0.00 2.45
2467 2864 8.290325 CAGCGAGAGTAAGTATTGTGTATGATA 58.710 37.037 0.00 0.00 0.00 2.15
2468 2865 8.291032 AGCGAGAGTAAGTATTGTGTATGATAC 58.709 37.037 0.00 0.00 0.00 2.24
2469 2866 7.537991 GCGAGAGTAAGTATTGTGTATGATACC 59.462 40.741 0.00 0.00 30.74 2.73
2470 2867 8.565416 CGAGAGTAAGTATTGTGTATGATACCA 58.435 37.037 0.00 0.00 30.74 3.25
2471 2868 9.900710 GAGAGTAAGTATTGTGTATGATACCAG 57.099 37.037 0.00 0.00 30.74 4.00
2472 2869 9.642343 AGAGTAAGTATTGTGTATGATACCAGA 57.358 33.333 0.00 0.00 30.74 3.86
2480 2877 8.978874 ATTGTGTATGATACCAGAATAAAGCA 57.021 30.769 0.00 0.00 0.00 3.91
2481 2878 7.786178 TGTGTATGATACCAGAATAAAGCAC 57.214 36.000 0.00 0.00 0.00 4.40
2482 2879 7.564793 TGTGTATGATACCAGAATAAAGCACT 58.435 34.615 0.00 0.00 0.00 4.40
2483 2880 8.700973 TGTGTATGATACCAGAATAAAGCACTA 58.299 33.333 0.00 0.00 0.00 2.74
2484 2881 9.197694 GTGTATGATACCAGAATAAAGCACTAG 57.802 37.037 0.00 0.00 0.00 2.57
2485 2882 8.367911 TGTATGATACCAGAATAAAGCACTAGG 58.632 37.037 0.00 0.00 0.00 3.02
2486 2883 7.618019 ATGATACCAGAATAAAGCACTAGGA 57.382 36.000 0.00 0.00 0.00 2.94
2487 2884 7.432148 TGATACCAGAATAAAGCACTAGGAA 57.568 36.000 0.00 0.00 0.00 3.36
2488 2885 7.500992 TGATACCAGAATAAAGCACTAGGAAG 58.499 38.462 0.00 0.00 0.00 3.46
2489 2886 5.104259 ACCAGAATAAAGCACTAGGAAGG 57.896 43.478 0.00 0.00 0.00 3.46
2490 2887 4.536489 ACCAGAATAAAGCACTAGGAAGGT 59.464 41.667 0.00 0.00 0.00 3.50
2491 2888 4.878397 CCAGAATAAAGCACTAGGAAGGTG 59.122 45.833 0.00 0.00 37.70 4.00
2492 2889 4.878397 CAGAATAAAGCACTAGGAAGGTGG 59.122 45.833 0.00 0.00 35.47 4.61
2493 2890 2.781681 TAAAGCACTAGGAAGGTGGC 57.218 50.000 0.00 0.00 35.47 5.01
2494 2891 0.321653 AAAGCACTAGGAAGGTGGCG 60.322 55.000 0.00 0.00 35.47 5.69
2495 2892 2.804828 AAGCACTAGGAAGGTGGCGC 62.805 60.000 0.00 0.00 35.47 6.53
2496 2893 2.509336 CACTAGGAAGGTGGCGCG 60.509 66.667 0.00 0.00 0.00 6.86
2497 2894 2.995574 ACTAGGAAGGTGGCGCGT 60.996 61.111 8.43 0.00 0.00 6.01
2498 2895 2.509336 CTAGGAAGGTGGCGCGTG 60.509 66.667 8.43 0.00 0.00 5.34
2499 2896 2.992689 TAGGAAGGTGGCGCGTGA 60.993 61.111 8.43 0.00 0.00 4.35
2500 2897 2.501223 CTAGGAAGGTGGCGCGTGAA 62.501 60.000 8.43 0.00 0.00 3.18
2501 2898 1.895020 TAGGAAGGTGGCGCGTGAAT 61.895 55.000 8.43 0.00 0.00 2.57
2502 2899 2.332654 GGAAGGTGGCGCGTGAATT 61.333 57.895 8.43 0.00 0.00 2.17
2503 2900 1.022451 GGAAGGTGGCGCGTGAATTA 61.022 55.000 8.43 0.00 0.00 1.40
2504 2901 0.800012 GAAGGTGGCGCGTGAATTAA 59.200 50.000 8.43 0.00 0.00 1.40
2505 2902 1.198178 GAAGGTGGCGCGTGAATTAAA 59.802 47.619 8.43 0.00 0.00 1.52
2506 2903 1.459450 AGGTGGCGCGTGAATTAAAT 58.541 45.000 8.43 0.00 0.00 1.40
2507 2904 2.634600 AGGTGGCGCGTGAATTAAATA 58.365 42.857 8.43 0.00 0.00 1.40
2508 2905 2.353579 AGGTGGCGCGTGAATTAAATAC 59.646 45.455 8.43 0.00 0.00 1.89
2509 2906 2.359598 GTGGCGCGTGAATTAAATACG 58.640 47.619 8.43 0.00 40.52 3.06
2510 2907 2.029486 GTGGCGCGTGAATTAAATACGA 59.971 45.455 8.43 0.00 40.01 3.43
2511 2908 2.671888 TGGCGCGTGAATTAAATACGAA 59.328 40.909 8.43 0.00 40.01 3.85
2512 2909 3.242155 TGGCGCGTGAATTAAATACGAAG 60.242 43.478 8.43 7.13 40.01 3.79
2513 2910 2.707469 GCGCGTGAATTAAATACGAAGC 59.293 45.455 8.43 11.59 40.01 3.86
2514 2911 3.277481 CGCGTGAATTAAATACGAAGCC 58.723 45.455 0.00 0.00 40.01 4.35
2515 2912 3.242155 CGCGTGAATTAAATACGAAGCCA 60.242 43.478 0.00 0.00 40.01 4.75
2516 2913 4.654015 GCGTGAATTAAATACGAAGCCAA 58.346 39.130 11.95 0.00 40.01 4.52
2517 2914 5.090083 GCGTGAATTAAATACGAAGCCAAA 58.910 37.500 11.95 0.00 40.01 3.28
2518 2915 5.003121 GCGTGAATTAAATACGAAGCCAAAC 59.997 40.000 11.95 0.00 40.01 2.93
2519 2916 5.224313 CGTGAATTAAATACGAAGCCAAACG 59.776 40.000 0.00 0.00 40.01 3.60
2520 2917 6.081693 GTGAATTAAATACGAAGCCAAACGT 58.918 36.000 0.00 0.00 44.72 3.99
2521 2918 6.032042 GTGAATTAAATACGAAGCCAAACGTG 59.968 38.462 0.00 0.00 42.61 4.49
2522 2919 5.866335 ATTAAATACGAAGCCAAACGTGA 57.134 34.783 0.00 0.00 42.61 4.35
2523 2920 3.806316 AAATACGAAGCCAAACGTGAG 57.194 42.857 0.00 0.00 42.61 3.51
2524 2921 1.722011 ATACGAAGCCAAACGTGAGG 58.278 50.000 0.00 2.29 42.61 3.86
2525 2922 0.675083 TACGAAGCCAAACGTGAGGA 59.325 50.000 10.48 0.00 42.61 3.71
2526 2923 0.179067 ACGAAGCCAAACGTGAGGAA 60.179 50.000 10.48 0.00 41.17 3.36
2527 2924 1.156736 CGAAGCCAAACGTGAGGAAT 58.843 50.000 10.48 0.00 0.00 3.01
2528 2925 2.289195 ACGAAGCCAAACGTGAGGAATA 60.289 45.455 10.48 0.00 41.17 1.75
2529 2926 2.739913 CGAAGCCAAACGTGAGGAATAA 59.260 45.455 10.48 0.00 0.00 1.40
2530 2927 3.424433 CGAAGCCAAACGTGAGGAATAAC 60.424 47.826 10.48 0.00 0.00 1.89
2531 2928 2.433436 AGCCAAACGTGAGGAATAACC 58.567 47.619 10.48 0.00 39.35 2.85
2532 2929 2.156098 GCCAAACGTGAGGAATAACCA 58.844 47.619 10.48 0.00 42.04 3.67
2533 2930 2.752903 GCCAAACGTGAGGAATAACCAT 59.247 45.455 10.48 0.00 42.04 3.55
2534 2931 3.192633 GCCAAACGTGAGGAATAACCATT 59.807 43.478 10.48 0.00 42.04 3.16
2535 2932 4.396790 GCCAAACGTGAGGAATAACCATTA 59.603 41.667 10.48 0.00 42.04 1.90
2536 2933 5.448632 GCCAAACGTGAGGAATAACCATTAG 60.449 44.000 10.48 0.00 42.04 1.73
2537 2934 5.878116 CCAAACGTGAGGAATAACCATTAGA 59.122 40.000 0.33 0.00 42.04 2.10
2538 2935 6.373216 CCAAACGTGAGGAATAACCATTAGAA 59.627 38.462 0.33 0.00 42.04 2.10
2539 2936 7.094549 CCAAACGTGAGGAATAACCATTAGAAA 60.095 37.037 0.33 0.00 42.04 2.52
2540 2937 6.980051 ACGTGAGGAATAACCATTAGAAAC 57.020 37.500 0.00 0.00 42.04 2.78
2541 2938 6.469410 ACGTGAGGAATAACCATTAGAAACA 58.531 36.000 0.00 0.00 42.04 2.83
2542 2939 6.594159 ACGTGAGGAATAACCATTAGAAACAG 59.406 38.462 0.00 0.00 42.04 3.16
2543 2940 6.037172 CGTGAGGAATAACCATTAGAAACAGG 59.963 42.308 0.00 0.00 42.04 4.00
2544 2941 6.884836 GTGAGGAATAACCATTAGAAACAGGT 59.115 38.462 0.00 0.00 42.04 4.00
2545 2942 7.393515 GTGAGGAATAACCATTAGAAACAGGTT 59.606 37.037 0.00 0.00 45.63 3.50
2546 2943 7.947890 TGAGGAATAACCATTAGAAACAGGTTT 59.052 33.333 0.00 0.00 41.33 3.27
2547 2944 8.122472 AGGAATAACCATTAGAAACAGGTTTG 57.878 34.615 1.52 0.00 41.33 2.93
2548 2945 7.947890 AGGAATAACCATTAGAAACAGGTTTGA 59.052 33.333 1.52 0.00 41.33 2.69
2549 2946 8.581578 GGAATAACCATTAGAAACAGGTTTGAA 58.418 33.333 1.52 0.00 41.33 2.69
2550 2947 9.406828 GAATAACCATTAGAAACAGGTTTGAAC 57.593 33.333 1.52 0.00 41.33 3.18
2551 2948 6.783708 AACCATTAGAAACAGGTTTGAACA 57.216 33.333 1.52 0.00 41.33 3.18
2552 2949 6.391227 ACCATTAGAAACAGGTTTGAACAG 57.609 37.500 1.52 0.00 32.11 3.16
2553 2950 5.301805 ACCATTAGAAACAGGTTTGAACAGG 59.698 40.000 1.52 5.42 32.11 4.00
2554 2951 5.534654 CCATTAGAAACAGGTTTGAACAGGA 59.465 40.000 1.52 0.00 32.11 3.86
2555 2952 6.294176 CCATTAGAAACAGGTTTGAACAGGAG 60.294 42.308 1.52 0.00 32.11 3.69
2556 2953 4.503714 AGAAACAGGTTTGAACAGGAGA 57.496 40.909 1.52 0.00 32.11 3.71
2557 2954 4.455606 AGAAACAGGTTTGAACAGGAGAG 58.544 43.478 1.52 0.00 32.11 3.20
2558 2955 3.933861 AACAGGTTTGAACAGGAGAGT 57.066 42.857 0.00 0.00 0.00 3.24
2559 2956 3.477210 ACAGGTTTGAACAGGAGAGTC 57.523 47.619 0.00 0.00 0.00 3.36
2560 2957 2.771943 ACAGGTTTGAACAGGAGAGTCA 59.228 45.455 0.00 0.00 0.00 3.41
2561 2958 3.181461 ACAGGTTTGAACAGGAGAGTCAG 60.181 47.826 0.00 0.00 0.00 3.51
2562 2959 2.370189 AGGTTTGAACAGGAGAGTCAGG 59.630 50.000 0.00 0.00 0.00 3.86
2563 2960 2.104963 GGTTTGAACAGGAGAGTCAGGT 59.895 50.000 0.00 0.00 0.00 4.00
2564 2961 3.433740 GGTTTGAACAGGAGAGTCAGGTT 60.434 47.826 0.00 0.00 0.00 3.50
2565 2962 4.200092 GTTTGAACAGGAGAGTCAGGTTT 58.800 43.478 0.00 0.00 0.00 3.27
2566 2963 3.753294 TGAACAGGAGAGTCAGGTTTC 57.247 47.619 0.00 0.00 0.00 2.78
2567 2964 2.035961 TGAACAGGAGAGTCAGGTTTCG 59.964 50.000 0.00 0.00 0.00 3.46
2568 2965 1.996798 ACAGGAGAGTCAGGTTTCGA 58.003 50.000 0.00 0.00 0.00 3.71
2569 2966 2.530701 ACAGGAGAGTCAGGTTTCGAT 58.469 47.619 0.00 0.00 0.00 3.59
2570 2967 2.494073 ACAGGAGAGTCAGGTTTCGATC 59.506 50.000 0.00 0.00 0.00 3.69
2571 2968 2.104170 AGGAGAGTCAGGTTTCGATCC 58.896 52.381 0.00 0.00 0.00 3.36
2572 2969 2.104170 GGAGAGTCAGGTTTCGATCCT 58.896 52.381 4.16 4.16 35.45 3.24
2578 2975 2.472695 CAGGTTTCGATCCTGTGGAA 57.527 50.000 21.62 0.00 45.09 3.53
2579 2976 2.778299 CAGGTTTCGATCCTGTGGAAA 58.222 47.619 21.62 0.00 45.09 3.13
2580 2977 3.347216 CAGGTTTCGATCCTGTGGAAAT 58.653 45.455 21.62 0.00 45.09 2.17
2581 2978 3.127548 CAGGTTTCGATCCTGTGGAAATG 59.872 47.826 21.62 3.02 45.09 2.32
2582 2979 3.081804 GGTTTCGATCCTGTGGAAATGT 58.918 45.455 0.00 0.00 36.99 2.71
2583 2980 3.119849 GGTTTCGATCCTGTGGAAATGTG 60.120 47.826 0.00 0.00 36.99 3.21
2584 2981 2.401583 TCGATCCTGTGGAAATGTGG 57.598 50.000 0.00 0.00 34.34 4.17
2585 2982 1.065491 TCGATCCTGTGGAAATGTGGG 60.065 52.381 0.00 0.00 34.34 4.61
2586 2983 1.340017 CGATCCTGTGGAAATGTGGGT 60.340 52.381 0.00 0.00 34.34 4.51
2587 2984 2.807676 GATCCTGTGGAAATGTGGGTT 58.192 47.619 0.00 0.00 34.34 4.11
2588 2985 3.621214 CGATCCTGTGGAAATGTGGGTTA 60.621 47.826 0.00 0.00 34.34 2.85
2589 2986 4.536765 GATCCTGTGGAAATGTGGGTTAT 58.463 43.478 0.00 0.00 34.34 1.89
2590 2987 3.696045 TCCTGTGGAAATGTGGGTTATG 58.304 45.455 0.00 0.00 0.00 1.90
2591 2988 2.760092 CCTGTGGAAATGTGGGTTATGG 59.240 50.000 0.00 0.00 0.00 2.74
2592 2989 2.760092 CTGTGGAAATGTGGGTTATGGG 59.240 50.000 0.00 0.00 0.00 4.00
2593 2990 1.480545 GTGGAAATGTGGGTTATGGGC 59.519 52.381 0.00 0.00 0.00 5.36
2594 2991 1.119684 GGAAATGTGGGTTATGGGCC 58.880 55.000 0.00 0.00 0.00 5.80
2595 2992 1.119684 GAAATGTGGGTTATGGGCCC 58.880 55.000 17.59 17.59 46.26 5.80
2620 3017 6.207691 CCATGTGGGTTAAAAGTATGAAGG 57.792 41.667 0.00 0.00 0.00 3.46
2621 3018 5.127031 CCATGTGGGTTAAAAGTATGAAGGG 59.873 44.000 0.00 0.00 0.00 3.95
2622 3019 4.083565 TGTGGGTTAAAAGTATGAAGGGC 58.916 43.478 0.00 0.00 0.00 5.19
2623 3020 4.083565 GTGGGTTAAAAGTATGAAGGGCA 58.916 43.478 0.00 0.00 0.00 5.36
2624 3021 4.157840 GTGGGTTAAAAGTATGAAGGGCAG 59.842 45.833 0.00 0.00 0.00 4.85
2625 3022 4.043561 TGGGTTAAAAGTATGAAGGGCAGA 59.956 41.667 0.00 0.00 0.00 4.26
2626 3023 5.201243 GGGTTAAAAGTATGAAGGGCAGAT 58.799 41.667 0.00 0.00 0.00 2.90
2627 3024 6.069323 TGGGTTAAAAGTATGAAGGGCAGATA 60.069 38.462 0.00 0.00 0.00 1.98
2628 3025 7.004691 GGGTTAAAAGTATGAAGGGCAGATAT 58.995 38.462 0.00 0.00 0.00 1.63
2629 3026 7.040409 GGGTTAAAAGTATGAAGGGCAGATATG 60.040 40.741 0.00 0.00 0.00 1.78
2630 3027 7.502561 GGTTAAAAGTATGAAGGGCAGATATGT 59.497 37.037 0.00 0.00 0.00 2.29
2631 3028 8.560374 GTTAAAAGTATGAAGGGCAGATATGTC 58.440 37.037 0.00 0.00 0.00 3.06
2632 3029 6.506538 AAAGTATGAAGGGCAGATATGTCT 57.493 37.500 0.00 0.00 34.14 3.41
2633 3030 6.506538 AAGTATGAAGGGCAGATATGTCTT 57.493 37.500 0.00 0.00 30.42 3.01
2634 3031 5.862845 AGTATGAAGGGCAGATATGTCTTG 58.137 41.667 0.00 0.00 30.42 3.02
2635 3032 2.923121 TGAAGGGCAGATATGTCTTGC 58.077 47.619 0.00 0.00 30.42 4.01
2636 3033 2.239402 TGAAGGGCAGATATGTCTTGCA 59.761 45.455 13.08 0.00 33.17 4.08
2637 3034 3.117776 TGAAGGGCAGATATGTCTTGCAT 60.118 43.478 13.08 0.00 41.42 3.96
2638 3035 2.860009 AGGGCAGATATGTCTTGCATG 58.140 47.619 13.08 0.00 38.47 4.06
2639 3036 2.440627 AGGGCAGATATGTCTTGCATGA 59.559 45.455 0.00 0.00 38.47 3.07
2640 3037 3.074094 AGGGCAGATATGTCTTGCATGAT 59.926 43.478 5.49 0.00 38.47 2.45
2641 3038 3.439476 GGGCAGATATGTCTTGCATGATC 59.561 47.826 5.49 0.00 38.47 2.92
2642 3039 4.070009 GGCAGATATGTCTTGCATGATCA 58.930 43.478 5.49 0.00 38.47 2.92
2643 3040 4.700692 GGCAGATATGTCTTGCATGATCAT 59.299 41.667 1.18 1.18 38.47 2.45
2644 3041 5.392057 GGCAGATATGTCTTGCATGATCATG 60.392 44.000 28.04 28.04 38.47 3.07
2645 3042 5.181433 GCAGATATGTCTTGCATGATCATGT 59.819 40.000 31.09 15.68 38.47 3.21
2646 3043 6.370718 GCAGATATGTCTTGCATGATCATGTA 59.629 38.462 31.09 26.36 38.47 2.29
2647 3044 7.094933 GCAGATATGTCTTGCATGATCATGTAA 60.095 37.037 29.70 29.70 40.28 2.41
2653 3050 4.642445 TTGCATGATCATGTAAGCAAGG 57.358 40.909 28.63 7.22 38.24 3.61
2654 3051 2.359848 TGCATGATCATGTAAGCAAGGC 59.640 45.455 31.09 17.16 40.80 4.35
2655 3052 2.359848 GCATGATCATGTAAGCAAGGCA 59.640 45.455 31.09 0.00 40.80 4.75
2656 3053 3.005472 GCATGATCATGTAAGCAAGGCAT 59.995 43.478 31.09 0.00 40.80 4.40
2657 3054 4.546570 CATGATCATGTAAGCAAGGCATG 58.453 43.478 24.87 0.00 40.76 4.06
2658 3055 3.623703 TGATCATGTAAGCAAGGCATGT 58.376 40.909 0.00 0.00 40.40 3.21
2659 3056 3.628942 TGATCATGTAAGCAAGGCATGTC 59.371 43.478 0.00 0.00 40.40 3.06
2660 3057 3.070476 TCATGTAAGCAAGGCATGTCA 57.930 42.857 0.00 0.00 40.40 3.58
2661 3058 3.011818 TCATGTAAGCAAGGCATGTCAG 58.988 45.455 0.00 0.00 40.40 3.51
2662 3059 2.857186 TGTAAGCAAGGCATGTCAGA 57.143 45.000 0.00 0.00 0.00 3.27
2663 3060 2.703416 TGTAAGCAAGGCATGTCAGAG 58.297 47.619 0.00 0.00 0.00 3.35
2664 3061 2.012673 GTAAGCAAGGCATGTCAGAGG 58.987 52.381 0.00 0.00 0.00 3.69
2665 3062 0.694771 AAGCAAGGCATGTCAGAGGA 59.305 50.000 0.00 0.00 0.00 3.71
2666 3063 0.917533 AGCAAGGCATGTCAGAGGAT 59.082 50.000 0.00 0.00 0.00 3.24
2667 3064 2.121948 AGCAAGGCATGTCAGAGGATA 58.878 47.619 0.00 0.00 0.00 2.59
2668 3065 2.104451 AGCAAGGCATGTCAGAGGATAG 59.896 50.000 0.00 0.00 0.00 2.08
2669 3066 2.492012 CAAGGCATGTCAGAGGATAGC 58.508 52.381 0.00 0.00 0.00 2.97
2670 3067 1.055040 AGGCATGTCAGAGGATAGCC 58.945 55.000 0.00 0.00 40.85 3.93
2686 3083 7.393841 AGGATAGCCTATTAGTTATGTCGAC 57.606 40.000 9.11 9.11 44.74 4.20
2687 3084 6.946583 AGGATAGCCTATTAGTTATGTCGACA 59.053 38.462 22.48 22.48 44.74 4.35
2688 3085 7.450634 AGGATAGCCTATTAGTTATGTCGACAA 59.549 37.037 24.13 9.30 44.74 3.18
2689 3086 7.541437 GGATAGCCTATTAGTTATGTCGACAAC 59.459 40.741 24.13 17.16 0.00 3.32
2690 3087 6.216801 AGCCTATTAGTTATGTCGACAACA 57.783 37.500 24.13 10.86 43.51 3.33
2691 3088 6.636705 AGCCTATTAGTTATGTCGACAACAA 58.363 36.000 24.13 16.45 42.37 2.83
2692 3089 7.272978 AGCCTATTAGTTATGTCGACAACAAT 58.727 34.615 24.13 18.46 42.37 2.71
2693 3090 7.438459 AGCCTATTAGTTATGTCGACAACAATC 59.562 37.037 24.13 13.14 42.37 2.67
2694 3091 7.223971 GCCTATTAGTTATGTCGACAACAATCA 59.776 37.037 24.13 6.31 42.37 2.57
2695 3092 9.261180 CCTATTAGTTATGTCGACAACAATCAT 57.739 33.333 24.13 13.13 42.37 2.45
2698 3095 8.642908 TTAGTTATGTCGACAACAATCATAGG 57.357 34.615 24.13 0.00 42.37 2.57
2699 3096 6.640518 AGTTATGTCGACAACAATCATAGGT 58.359 36.000 24.13 3.58 42.37 3.08
2700 3097 7.778083 AGTTATGTCGACAACAATCATAGGTA 58.222 34.615 24.13 2.50 42.37 3.08
2701 3098 7.705325 AGTTATGTCGACAACAATCATAGGTAC 59.295 37.037 24.13 4.08 42.37 3.34
2702 3099 4.751060 TGTCGACAACAATCATAGGTACC 58.249 43.478 17.62 2.73 34.03 3.34
2703 3100 4.221041 TGTCGACAACAATCATAGGTACCA 59.779 41.667 17.62 0.00 34.03 3.25
2704 3101 5.172934 GTCGACAACAATCATAGGTACCAA 58.827 41.667 15.94 0.00 0.00 3.67
2705 3102 5.291128 GTCGACAACAATCATAGGTACCAAG 59.709 44.000 15.94 3.13 0.00 3.61
2706 3103 4.570772 CGACAACAATCATAGGTACCAAGG 59.429 45.833 15.94 2.30 0.00 3.61
2707 3104 4.855340 ACAACAATCATAGGTACCAAGGG 58.145 43.478 15.94 0.32 0.00 3.95
2708 3105 3.577805 ACAATCATAGGTACCAAGGGC 57.422 47.619 15.94 0.00 0.00 5.19
2709 3106 2.158813 ACAATCATAGGTACCAAGGGCG 60.159 50.000 15.94 0.00 0.00 6.13
2710 3107 2.097110 ATCATAGGTACCAAGGGCGA 57.903 50.000 15.94 1.82 0.00 5.54
2711 3108 1.410004 TCATAGGTACCAAGGGCGAG 58.590 55.000 15.94 0.00 0.00 5.03
2712 3109 0.393077 CATAGGTACCAAGGGCGAGG 59.607 60.000 15.94 0.00 0.00 4.63
2713 3110 0.031414 ATAGGTACCAAGGGCGAGGT 60.031 55.000 15.94 0.00 41.89 3.85
2714 3111 0.630673 TAGGTACCAAGGGCGAGGTA 59.369 55.000 15.94 0.00 39.31 3.08
2716 3113 3.607163 TACCAAGGGCGAGGTACG 58.393 61.111 0.00 0.00 45.66 3.67
2717 3114 1.001020 TACCAAGGGCGAGGTACGA 60.001 57.895 0.00 0.00 45.77 3.43
2718 3115 0.611618 TACCAAGGGCGAGGTACGAA 60.612 55.000 0.00 0.00 45.77 3.85
2719 3116 1.153628 CCAAGGGCGAGGTACGAAG 60.154 63.158 0.00 0.00 45.77 3.79
2720 3117 1.601419 CCAAGGGCGAGGTACGAAGA 61.601 60.000 0.00 0.00 45.77 2.87
2721 3118 0.179134 CAAGGGCGAGGTACGAAGAG 60.179 60.000 0.00 0.00 45.77 2.85
2722 3119 0.323178 AAGGGCGAGGTACGAAGAGA 60.323 55.000 0.00 0.00 45.77 3.10
2723 3120 0.323178 AGGGCGAGGTACGAAGAGAA 60.323 55.000 0.00 0.00 45.77 2.87
2724 3121 0.179142 GGGCGAGGTACGAAGAGAAC 60.179 60.000 0.00 0.00 45.77 3.01
2725 3122 0.179142 GGCGAGGTACGAAGAGAACC 60.179 60.000 0.00 0.00 45.77 3.62
2726 3123 0.524862 GCGAGGTACGAAGAGAACCA 59.475 55.000 0.00 0.00 45.77 3.67
2727 3124 1.134560 GCGAGGTACGAAGAGAACCAT 59.865 52.381 0.00 0.00 45.77 3.55
2728 3125 2.416972 GCGAGGTACGAAGAGAACCATT 60.417 50.000 0.00 0.00 45.77 3.16
2729 3126 3.846360 CGAGGTACGAAGAGAACCATTT 58.154 45.455 0.00 0.00 45.77 2.32
2730 3127 4.243270 CGAGGTACGAAGAGAACCATTTT 58.757 43.478 0.00 0.00 45.77 1.82
2731 3128 4.326548 CGAGGTACGAAGAGAACCATTTTC 59.673 45.833 0.00 0.00 45.77 2.29
2732 3129 4.576879 AGGTACGAAGAGAACCATTTTCC 58.423 43.478 0.00 0.00 35.64 3.13
2733 3130 4.286291 AGGTACGAAGAGAACCATTTTCCT 59.714 41.667 0.00 0.00 35.64 3.36
2734 3131 4.392138 GGTACGAAGAGAACCATTTTCCTG 59.608 45.833 0.00 0.00 33.28 3.86
2735 3132 2.814336 ACGAAGAGAACCATTTTCCTGC 59.186 45.455 0.00 0.00 0.00 4.85
2736 3133 3.077359 CGAAGAGAACCATTTTCCTGCT 58.923 45.455 0.00 0.00 0.00 4.24
2737 3134 3.126000 CGAAGAGAACCATTTTCCTGCTC 59.874 47.826 0.00 0.00 0.00 4.26
2738 3135 2.704572 AGAGAACCATTTTCCTGCTCG 58.295 47.619 0.00 0.00 0.00 5.03
2739 3136 2.039084 AGAGAACCATTTTCCTGCTCGT 59.961 45.455 0.00 0.00 0.00 4.18
2740 3137 2.814336 GAGAACCATTTTCCTGCTCGTT 59.186 45.455 0.00 0.00 0.00 3.85
2741 3138 2.554032 AGAACCATTTTCCTGCTCGTTG 59.446 45.455 0.00 0.00 0.00 4.10
2742 3139 2.270352 ACCATTTTCCTGCTCGTTGA 57.730 45.000 0.00 0.00 0.00 3.18
2743 3140 2.582052 ACCATTTTCCTGCTCGTTGAA 58.418 42.857 0.00 0.00 0.00 2.69
2744 3141 2.955660 ACCATTTTCCTGCTCGTTGAAA 59.044 40.909 0.00 0.00 0.00 2.69
2745 3142 3.243401 ACCATTTTCCTGCTCGTTGAAAC 60.243 43.478 0.00 0.00 0.00 2.78
2746 3143 3.243367 CCATTTTCCTGCTCGTTGAAACA 60.243 43.478 0.00 0.00 0.00 2.83
2747 3144 4.358851 CATTTTCCTGCTCGTTGAAACAA 58.641 39.130 0.00 0.00 0.00 2.83
2748 3145 3.691049 TTTCCTGCTCGTTGAAACAAG 57.309 42.857 0.00 0.00 0.00 3.16
2749 3146 1.593196 TCCTGCTCGTTGAAACAAGG 58.407 50.000 0.00 0.00 0.00 3.61
2750 3147 0.040067 CCTGCTCGTTGAAACAAGGC 60.040 55.000 0.00 0.00 0.00 4.35
2751 3148 0.384725 CTGCTCGTTGAAACAAGGCG 60.385 55.000 0.00 0.00 0.00 5.52
2752 3149 1.082104 GCTCGTTGAAACAAGGCGG 60.082 57.895 0.00 0.00 0.00 6.13
2753 3150 1.503818 GCTCGTTGAAACAAGGCGGA 61.504 55.000 0.00 0.00 0.00 5.54
2754 3151 0.234884 CTCGTTGAAACAAGGCGGAC 59.765 55.000 0.00 0.00 0.00 4.79
2755 3152 1.161563 TCGTTGAAACAAGGCGGACC 61.162 55.000 0.00 0.00 0.00 4.46
2756 3153 1.440938 CGTTGAAACAAGGCGGACCA 61.441 55.000 0.00 0.00 39.06 4.02
2757 3154 0.741915 GTTGAAACAAGGCGGACCAA 59.258 50.000 0.00 0.00 39.06 3.67
2758 3155 1.339929 GTTGAAACAAGGCGGACCAAT 59.660 47.619 0.00 0.00 39.06 3.16
2759 3156 2.554893 GTTGAAACAAGGCGGACCAATA 59.445 45.455 0.00 0.00 39.06 1.90
2760 3157 2.432444 TGAAACAAGGCGGACCAATAG 58.568 47.619 0.00 0.00 39.06 1.73
2761 3158 1.743394 GAAACAAGGCGGACCAATAGG 59.257 52.381 0.00 0.00 39.06 2.57
2762 3159 0.679960 AACAAGGCGGACCAATAGGC 60.680 55.000 0.00 0.00 39.06 3.93
2763 3160 1.077787 CAAGGCGGACCAATAGGCA 60.078 57.895 0.00 0.00 39.06 4.75
2764 3161 0.679640 CAAGGCGGACCAATAGGCAA 60.680 55.000 0.00 0.00 39.06 4.52
2765 3162 0.039035 AAGGCGGACCAATAGGCAAA 59.961 50.000 0.00 0.00 39.06 3.68
2766 3163 0.394352 AGGCGGACCAATAGGCAAAG 60.394 55.000 0.00 0.00 39.06 2.77
2767 3164 0.679960 GGCGGACCAATAGGCAAAGT 60.680 55.000 0.00 0.00 39.06 2.66
2768 3165 1.173913 GCGGACCAATAGGCAAAGTT 58.826 50.000 0.00 0.00 39.06 2.66
2769 3166 1.132453 GCGGACCAATAGGCAAAGTTC 59.868 52.381 0.00 0.00 39.06 3.01
2770 3167 2.711542 CGGACCAATAGGCAAAGTTCT 58.288 47.619 0.00 0.00 39.06 3.01
2771 3168 2.678336 CGGACCAATAGGCAAAGTTCTC 59.322 50.000 0.00 0.00 39.06 2.87
2772 3169 2.678336 GGACCAATAGGCAAAGTTCTCG 59.322 50.000 0.00 0.00 39.06 4.04
2773 3170 3.335579 GACCAATAGGCAAAGTTCTCGT 58.664 45.455 0.00 0.00 39.06 4.18
2774 3171 3.335579 ACCAATAGGCAAAGTTCTCGTC 58.664 45.455 0.00 0.00 39.06 4.20
2775 3172 2.678336 CCAATAGGCAAAGTTCTCGTCC 59.322 50.000 0.00 0.00 0.00 4.79
2776 3173 3.334691 CAATAGGCAAAGTTCTCGTCCA 58.665 45.455 0.00 0.00 0.00 4.02
2777 3174 3.914426 ATAGGCAAAGTTCTCGTCCAT 57.086 42.857 0.00 0.00 0.00 3.41
2778 3175 2.100605 AGGCAAAGTTCTCGTCCATC 57.899 50.000 0.00 0.00 0.00 3.51
2779 3176 0.721718 GGCAAAGTTCTCGTCCATCG 59.278 55.000 0.00 0.00 41.41 3.84
2780 3177 1.671850 GGCAAAGTTCTCGTCCATCGA 60.672 52.381 0.00 0.00 46.83 3.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
127 128 3.106508 CGTTAACGCATCGGCTAAAAA 57.893 42.857 16.05 0.00 38.10 1.94
378 384 5.248477 TGAAGAGTGCCTAAGGTTGAATAGT 59.752 40.000 0.00 0.00 0.00 2.12
413 419 3.333680 AGATCCAAAAGCCCTTTCTACCA 59.666 43.478 0.00 0.00 31.45 3.25
420 426 3.331889 TCTTGAGAGATCCAAAAGCCCTT 59.668 43.478 0.00 0.00 0.00 3.95
486 492 7.223971 GCTATAACAATATCAACTTGTGTCGGA 59.776 37.037 0.00 0.00 36.95 4.55
501 507 9.278978 TGAAGAACACAACAAGCTATAACAATA 57.721 29.630 0.00 0.00 0.00 1.90
584 590 2.350057 TGTTCGAATTGGTTGGGTGA 57.650 45.000 0.00 0.00 0.00 4.02
642 648 1.742411 GCTGCCATTTGTAGCCTACGA 60.742 52.381 0.00 0.00 45.94 3.43
745 751 5.868801 CCAAACATCACAAATACATGGTTCC 59.131 40.000 0.00 0.00 0.00 3.62
778 945 6.873076 TGTCCAGCCATCAAATAAATTCAAAC 59.127 34.615 0.00 0.00 0.00 2.93
818 986 7.667043 TCACAAGTACATGGTTCAAATAGAC 57.333 36.000 2.78 0.00 0.00 2.59
836 1005 6.808008 ATGTAGTTCTCCAAACATCACAAG 57.192 37.500 0.00 0.00 0.00 3.16
916 1165 6.808008 ATGTAGTTCTCCAAACATCACAAG 57.192 37.500 0.00 0.00 0.00 3.16
1037 1345 0.399091 AATGATCCCAGCTCTCCCGA 60.399 55.000 0.00 0.00 0.00 5.14
1196 1505 4.687901 TTGACTTGATCTCCAGTGACAA 57.312 40.909 0.00 0.00 0.00 3.18
1235 1544 1.625818 CCCTTCCCCATATCTTCCTCG 59.374 57.143 0.00 0.00 0.00 4.63
1293 1608 3.667960 GCCTAATTGTGCAAGTGTCTTCG 60.668 47.826 0.00 0.00 0.00 3.79
1651 1968 7.331791 AGTGATAACTAGTGGATCCTCAAAAC 58.668 38.462 14.23 1.77 0.00 2.43
1785 2105 2.315155 AGTGGGCTAGGTTCTCCTCTTA 59.685 50.000 0.00 0.00 43.94 2.10
1790 2110 2.162264 AGTAGTGGGCTAGGTTCTCC 57.838 55.000 0.00 0.00 0.00 3.71
1863 2187 3.449377 ACCCAAACGGACTTGTTGATTTT 59.551 39.130 0.00 0.00 34.64 1.82
1954 2280 6.468543 TCAAAGTGCACTACAACCATACATA 58.531 36.000 22.01 0.00 0.00 2.29
2024 2392 2.352421 CCCAAAAGCAATCAGAGTGCAG 60.352 50.000 24.06 10.83 44.74 4.41
2198 2595 2.426738 CTGCTGTTTGGTTGGAAGAACA 59.573 45.455 0.00 0.00 0.00 3.18
2251 2648 4.472286 CGTTCCATTCATGTGTTTGGTAC 58.528 43.478 0.00 0.02 0.00 3.34
2344 2741 8.937207 ACCTTTATACCTTACTCTCGATGTAT 57.063 34.615 0.00 0.00 0.00 2.29
2345 2742 9.277783 GTACCTTTATACCTTACTCTCGATGTA 57.722 37.037 0.00 0.00 0.00 2.29
2346 2743 7.776969 TGTACCTTTATACCTTACTCTCGATGT 59.223 37.037 0.00 0.00 0.00 3.06
2347 2744 8.162878 TGTACCTTTATACCTTACTCTCGATG 57.837 38.462 0.00 0.00 0.00 3.84
2348 2745 8.757982 TTGTACCTTTATACCTTACTCTCGAT 57.242 34.615 0.00 0.00 0.00 3.59
2349 2746 8.757982 ATTGTACCTTTATACCTTACTCTCGA 57.242 34.615 0.00 0.00 0.00 4.04
2358 2755 9.690913 GGAACCTTTTATTGTACCTTTATACCT 57.309 33.333 0.00 0.00 0.00 3.08
2359 2756 9.465199 TGGAACCTTTTATTGTACCTTTATACC 57.535 33.333 0.00 0.00 0.00 2.73
2362 2759 8.528643 GCTTGGAACCTTTTATTGTACCTTTAT 58.471 33.333 0.00 0.00 0.00 1.40
2363 2760 7.308710 CGCTTGGAACCTTTTATTGTACCTTTA 60.309 37.037 0.00 0.00 0.00 1.85
2364 2761 6.516028 CGCTTGGAACCTTTTATTGTACCTTT 60.516 38.462 0.00 0.00 0.00 3.11
2365 2762 5.048294 CGCTTGGAACCTTTTATTGTACCTT 60.048 40.000 0.00 0.00 0.00 3.50
2366 2763 4.457949 CGCTTGGAACCTTTTATTGTACCT 59.542 41.667 0.00 0.00 0.00 3.08
2367 2764 4.380128 CCGCTTGGAACCTTTTATTGTACC 60.380 45.833 0.00 0.00 33.02 3.34
2368 2765 4.456566 TCCGCTTGGAACCTTTTATTGTAC 59.543 41.667 0.00 0.00 39.40 2.90
2369 2766 4.653868 TCCGCTTGGAACCTTTTATTGTA 58.346 39.130 0.00 0.00 39.40 2.41
2370 2767 3.492337 TCCGCTTGGAACCTTTTATTGT 58.508 40.909 0.00 0.00 39.40 2.71
2383 2780 3.321497 GAGCAACTATCTATCCGCTTGG 58.679 50.000 0.00 0.00 0.00 3.61
2384 2781 2.983136 CGAGCAACTATCTATCCGCTTG 59.017 50.000 0.00 0.00 0.00 4.01
2385 2782 2.885266 TCGAGCAACTATCTATCCGCTT 59.115 45.455 0.00 0.00 0.00 4.68
2386 2783 2.505405 TCGAGCAACTATCTATCCGCT 58.495 47.619 0.00 0.00 0.00 5.52
2387 2784 2.991434 TCGAGCAACTATCTATCCGC 57.009 50.000 0.00 0.00 0.00 5.54
2388 2785 4.214545 AGACTTCGAGCAACTATCTATCCG 59.785 45.833 0.00 0.00 0.00 4.18
2389 2786 5.239744 TCAGACTTCGAGCAACTATCTATCC 59.760 44.000 0.00 0.00 0.00 2.59
2390 2787 6.307031 TCAGACTTCGAGCAACTATCTATC 57.693 41.667 0.00 0.00 0.00 2.08
2391 2788 6.460399 GGTTCAGACTTCGAGCAACTATCTAT 60.460 42.308 0.00 0.00 0.00 1.98
2392 2789 5.163642 GGTTCAGACTTCGAGCAACTATCTA 60.164 44.000 0.00 0.00 0.00 1.98
2393 2790 4.381079 GGTTCAGACTTCGAGCAACTATCT 60.381 45.833 0.00 0.00 0.00 1.98
2394 2791 3.860536 GGTTCAGACTTCGAGCAACTATC 59.139 47.826 0.00 0.00 0.00 2.08
2395 2792 3.258372 TGGTTCAGACTTCGAGCAACTAT 59.742 43.478 0.00 0.00 0.00 2.12
2396 2793 2.626266 TGGTTCAGACTTCGAGCAACTA 59.374 45.455 0.00 0.00 0.00 2.24
2397 2794 1.412710 TGGTTCAGACTTCGAGCAACT 59.587 47.619 0.00 0.00 0.00 3.16
2398 2795 1.795286 CTGGTTCAGACTTCGAGCAAC 59.205 52.381 0.00 0.00 32.44 4.17
2399 2796 1.686587 TCTGGTTCAGACTTCGAGCAA 59.313 47.619 0.00 0.00 35.39 3.91
2400 2797 1.270826 CTCTGGTTCAGACTTCGAGCA 59.729 52.381 0.00 0.00 35.39 4.26
2401 2798 1.271102 ACTCTGGTTCAGACTTCGAGC 59.729 52.381 0.00 0.00 35.39 5.03
2402 2799 2.554462 TCACTCTGGTTCAGACTTCGAG 59.446 50.000 0.00 0.00 35.39 4.04
2403 2800 2.554462 CTCACTCTGGTTCAGACTTCGA 59.446 50.000 0.00 0.00 35.39 3.71
2404 2801 2.554462 TCTCACTCTGGTTCAGACTTCG 59.446 50.000 0.00 0.00 35.39 3.79
2405 2802 4.592485 TTCTCACTCTGGTTCAGACTTC 57.408 45.455 0.00 0.00 35.39 3.01
2406 2803 5.359194 TTTTCTCACTCTGGTTCAGACTT 57.641 39.130 0.00 0.00 35.39 3.01
2407 2804 4.202305 CCTTTTCTCACTCTGGTTCAGACT 60.202 45.833 0.00 0.00 35.39 3.24
2408 2805 4.061596 CCTTTTCTCACTCTGGTTCAGAC 58.938 47.826 0.00 0.00 35.39 3.51
2409 2806 3.071602 CCCTTTTCTCACTCTGGTTCAGA 59.928 47.826 0.00 0.00 38.25 3.27
2410 2807 3.406764 CCCTTTTCTCACTCTGGTTCAG 58.593 50.000 0.00 0.00 0.00 3.02
2411 2808 2.106511 CCCCTTTTCTCACTCTGGTTCA 59.893 50.000 0.00 0.00 0.00 3.18
2412 2809 2.553247 CCCCCTTTTCTCACTCTGGTTC 60.553 54.545 0.00 0.00 0.00 3.62
2413 2810 1.425448 CCCCCTTTTCTCACTCTGGTT 59.575 52.381 0.00 0.00 0.00 3.67
2414 2811 1.068121 CCCCCTTTTCTCACTCTGGT 58.932 55.000 0.00 0.00 0.00 4.00
2415 2812 1.068121 ACCCCCTTTTCTCACTCTGG 58.932 55.000 0.00 0.00 0.00 3.86
2416 2813 2.106511 TGAACCCCCTTTTCTCACTCTG 59.893 50.000 0.00 0.00 0.00 3.35
2417 2814 2.373502 CTGAACCCCCTTTTCTCACTCT 59.626 50.000 0.00 0.00 0.00 3.24
2418 2815 2.372172 TCTGAACCCCCTTTTCTCACTC 59.628 50.000 0.00 0.00 0.00 3.51
2419 2816 2.373502 CTCTGAACCCCCTTTTCTCACT 59.626 50.000 0.00 0.00 0.00 3.41
2420 2817 2.784347 CTCTGAACCCCCTTTTCTCAC 58.216 52.381 0.00 0.00 0.00 3.51
2421 2818 1.073923 GCTCTGAACCCCCTTTTCTCA 59.926 52.381 0.00 0.00 0.00 3.27
2422 2819 1.073923 TGCTCTGAACCCCCTTTTCTC 59.926 52.381 0.00 0.00 0.00 2.87
2423 2820 1.074566 CTGCTCTGAACCCCCTTTTCT 59.925 52.381 0.00 0.00 0.00 2.52
2424 2821 1.539157 CTGCTCTGAACCCCCTTTTC 58.461 55.000 0.00 0.00 0.00 2.29
2425 2822 0.540597 GCTGCTCTGAACCCCCTTTT 60.541 55.000 0.00 0.00 0.00 2.27
2426 2823 1.075659 GCTGCTCTGAACCCCCTTT 59.924 57.895 0.00 0.00 0.00 3.11
2427 2824 2.759795 GCTGCTCTGAACCCCCTT 59.240 61.111 0.00 0.00 0.00 3.95
2428 2825 3.710722 CGCTGCTCTGAACCCCCT 61.711 66.667 0.00 0.00 0.00 4.79
2429 2826 3.672295 CTCGCTGCTCTGAACCCCC 62.672 68.421 0.00 0.00 0.00 5.40
2430 2827 2.125350 CTCGCTGCTCTGAACCCC 60.125 66.667 0.00 0.00 0.00 4.95
2431 2828 1.153667 CTCTCGCTGCTCTGAACCC 60.154 63.158 0.00 0.00 0.00 4.11
2432 2829 0.811915 TACTCTCGCTGCTCTGAACC 59.188 55.000 0.00 0.00 0.00 3.62
2433 2830 2.094957 ACTTACTCTCGCTGCTCTGAAC 60.095 50.000 0.00 0.00 0.00 3.18
2434 2831 2.163509 ACTTACTCTCGCTGCTCTGAA 58.836 47.619 0.00 0.00 0.00 3.02
2435 2832 1.827681 ACTTACTCTCGCTGCTCTGA 58.172 50.000 0.00 0.00 0.00 3.27
2436 2833 3.980646 ATACTTACTCTCGCTGCTCTG 57.019 47.619 0.00 0.00 0.00 3.35
2437 2834 3.697045 ACAATACTTACTCTCGCTGCTCT 59.303 43.478 0.00 0.00 0.00 4.09
2438 2835 3.794028 CACAATACTTACTCTCGCTGCTC 59.206 47.826 0.00 0.00 0.00 4.26
2439 2836 3.193691 ACACAATACTTACTCTCGCTGCT 59.806 43.478 0.00 0.00 0.00 4.24
2440 2837 3.512680 ACACAATACTTACTCTCGCTGC 58.487 45.455 0.00 0.00 0.00 5.25
2441 2838 6.495706 TCATACACAATACTTACTCTCGCTG 58.504 40.000 0.00 0.00 0.00 5.18
2442 2839 6.694877 TCATACACAATACTTACTCTCGCT 57.305 37.500 0.00 0.00 0.00 4.93
2443 2840 7.537991 GGTATCATACACAATACTTACTCTCGC 59.462 40.741 0.00 0.00 0.00 5.03
2444 2841 8.565416 TGGTATCATACACAATACTTACTCTCG 58.435 37.037 0.00 0.00 0.00 4.04
2445 2842 9.900710 CTGGTATCATACACAATACTTACTCTC 57.099 37.037 0.00 0.00 0.00 3.20
2446 2843 9.642343 TCTGGTATCATACACAATACTTACTCT 57.358 33.333 0.00 0.00 0.00 3.24
2455 2852 8.840321 GTGCTTTATTCTGGTATCATACACAAT 58.160 33.333 0.00 0.00 0.00 2.71
2456 2853 8.046708 AGTGCTTTATTCTGGTATCATACACAA 58.953 33.333 0.00 0.00 0.00 3.33
2457 2854 7.564793 AGTGCTTTATTCTGGTATCATACACA 58.435 34.615 0.00 0.00 0.00 3.72
2458 2855 9.197694 CTAGTGCTTTATTCTGGTATCATACAC 57.802 37.037 0.00 0.00 0.00 2.90
2459 2856 8.367911 CCTAGTGCTTTATTCTGGTATCATACA 58.632 37.037 0.00 0.00 0.00 2.29
2460 2857 8.585881 TCCTAGTGCTTTATTCTGGTATCATAC 58.414 37.037 0.00 0.00 0.00 2.39
2461 2858 8.721133 TCCTAGTGCTTTATTCTGGTATCATA 57.279 34.615 0.00 0.00 0.00 2.15
2462 2859 7.618019 TCCTAGTGCTTTATTCTGGTATCAT 57.382 36.000 0.00 0.00 0.00 2.45
2463 2860 7.419057 CCTTCCTAGTGCTTTATTCTGGTATCA 60.419 40.741 0.00 0.00 0.00 2.15
2464 2861 6.931840 CCTTCCTAGTGCTTTATTCTGGTATC 59.068 42.308 0.00 0.00 0.00 2.24
2465 2862 6.387220 ACCTTCCTAGTGCTTTATTCTGGTAT 59.613 38.462 0.00 0.00 0.00 2.73
2466 2863 5.724854 ACCTTCCTAGTGCTTTATTCTGGTA 59.275 40.000 0.00 0.00 0.00 3.25
2467 2864 4.536489 ACCTTCCTAGTGCTTTATTCTGGT 59.464 41.667 0.00 0.00 0.00 4.00
2468 2865 4.878397 CACCTTCCTAGTGCTTTATTCTGG 59.122 45.833 0.00 0.00 0.00 3.86
2469 2866 4.878397 CCACCTTCCTAGTGCTTTATTCTG 59.122 45.833 0.00 0.00 33.75 3.02
2470 2867 4.626529 GCCACCTTCCTAGTGCTTTATTCT 60.627 45.833 0.00 0.00 33.75 2.40
2471 2868 3.628032 GCCACCTTCCTAGTGCTTTATTC 59.372 47.826 0.00 0.00 33.75 1.75
2472 2869 3.621558 GCCACCTTCCTAGTGCTTTATT 58.378 45.455 0.00 0.00 33.75 1.40
2473 2870 2.420129 CGCCACCTTCCTAGTGCTTTAT 60.420 50.000 0.00 0.00 33.75 1.40
2474 2871 1.066430 CGCCACCTTCCTAGTGCTTTA 60.066 52.381 0.00 0.00 33.75 1.85
2475 2872 0.321653 CGCCACCTTCCTAGTGCTTT 60.322 55.000 0.00 0.00 33.75 3.51
2476 2873 1.296715 CGCCACCTTCCTAGTGCTT 59.703 57.895 0.00 0.00 33.75 3.91
2477 2874 2.982130 CGCCACCTTCCTAGTGCT 59.018 61.111 0.00 0.00 33.75 4.40
2478 2875 2.820037 GCGCCACCTTCCTAGTGC 60.820 66.667 0.00 0.00 33.75 4.40
2479 2876 2.509336 CGCGCCACCTTCCTAGTG 60.509 66.667 0.00 0.00 34.91 2.74
2480 2877 2.995574 ACGCGCCACCTTCCTAGT 60.996 61.111 5.73 0.00 0.00 2.57
2481 2878 2.501223 TTCACGCGCCACCTTCCTAG 62.501 60.000 5.73 0.00 0.00 3.02
2482 2879 1.895020 ATTCACGCGCCACCTTCCTA 61.895 55.000 5.73 0.00 0.00 2.94
2483 2880 2.748058 AATTCACGCGCCACCTTCCT 62.748 55.000 5.73 0.00 0.00 3.36
2484 2881 1.022451 TAATTCACGCGCCACCTTCC 61.022 55.000 5.73 0.00 0.00 3.46
2485 2882 0.800012 TTAATTCACGCGCCACCTTC 59.200 50.000 5.73 0.00 0.00 3.46
2486 2883 1.240256 TTTAATTCACGCGCCACCTT 58.760 45.000 5.73 0.00 0.00 3.50
2487 2884 1.459450 ATTTAATTCACGCGCCACCT 58.541 45.000 5.73 0.00 0.00 4.00
2488 2885 2.711885 GTATTTAATTCACGCGCCACC 58.288 47.619 5.73 0.00 0.00 4.61
2489 2886 2.029486 TCGTATTTAATTCACGCGCCAC 59.971 45.455 5.73 0.00 35.70 5.01
2490 2887 2.269172 TCGTATTTAATTCACGCGCCA 58.731 42.857 5.73 0.00 35.70 5.69
2491 2888 3.277481 CTTCGTATTTAATTCACGCGCC 58.723 45.455 5.73 0.00 35.70 6.53
2492 2889 2.707469 GCTTCGTATTTAATTCACGCGC 59.293 45.455 5.73 0.00 35.70 6.86
2493 2890 3.242155 TGGCTTCGTATTTAATTCACGCG 60.242 43.478 3.53 3.53 35.70 6.01
2494 2891 4.267357 TGGCTTCGTATTTAATTCACGC 57.733 40.909 0.00 0.00 35.70 5.34
2495 2892 5.224313 CGTTTGGCTTCGTATTTAATTCACG 59.776 40.000 0.00 0.00 37.03 4.35
2496 2893 6.032042 CACGTTTGGCTTCGTATTTAATTCAC 59.968 38.462 0.00 0.00 38.52 3.18
2497 2894 6.073167 TCACGTTTGGCTTCGTATTTAATTCA 60.073 34.615 0.00 0.00 38.52 2.57
2498 2895 6.308675 TCACGTTTGGCTTCGTATTTAATTC 58.691 36.000 0.00 0.00 38.52 2.17
2499 2896 6.243811 TCACGTTTGGCTTCGTATTTAATT 57.756 33.333 0.00 0.00 38.52 1.40
2500 2897 5.163794 CCTCACGTTTGGCTTCGTATTTAAT 60.164 40.000 0.00 0.00 38.52 1.40
2501 2898 4.152759 CCTCACGTTTGGCTTCGTATTTAA 59.847 41.667 0.00 0.00 38.52 1.52
2502 2899 3.680937 CCTCACGTTTGGCTTCGTATTTA 59.319 43.478 0.00 0.00 38.52 1.40
2503 2900 2.482721 CCTCACGTTTGGCTTCGTATTT 59.517 45.455 0.00 0.00 38.52 1.40
2504 2901 2.073816 CCTCACGTTTGGCTTCGTATT 58.926 47.619 0.00 0.00 38.52 1.89
2505 2902 1.274167 TCCTCACGTTTGGCTTCGTAT 59.726 47.619 0.00 0.00 38.52 3.06
2506 2903 0.675083 TCCTCACGTTTGGCTTCGTA 59.325 50.000 0.00 0.00 38.52 3.43
2507 2904 0.179067 TTCCTCACGTTTGGCTTCGT 60.179 50.000 0.00 0.00 40.99 3.85
2508 2905 1.156736 ATTCCTCACGTTTGGCTTCG 58.843 50.000 0.00 0.00 0.00 3.79
2509 2906 3.119955 GGTTATTCCTCACGTTTGGCTTC 60.120 47.826 0.00 0.00 0.00 3.86
2510 2907 2.817844 GGTTATTCCTCACGTTTGGCTT 59.182 45.455 0.00 0.00 0.00 4.35
2511 2908 2.224670 TGGTTATTCCTCACGTTTGGCT 60.225 45.455 0.00 0.00 37.07 4.75
2512 2909 2.156098 TGGTTATTCCTCACGTTTGGC 58.844 47.619 0.00 0.00 37.07 4.52
2513 2910 5.878116 TCTAATGGTTATTCCTCACGTTTGG 59.122 40.000 0.00 0.00 37.07 3.28
2514 2911 6.978343 TCTAATGGTTATTCCTCACGTTTG 57.022 37.500 0.00 0.00 37.07 2.93
2515 2912 7.446013 TGTTTCTAATGGTTATTCCTCACGTTT 59.554 33.333 0.00 0.00 37.07 3.60
2516 2913 6.938030 TGTTTCTAATGGTTATTCCTCACGTT 59.062 34.615 0.00 0.00 37.07 3.99
2517 2914 6.469410 TGTTTCTAATGGTTATTCCTCACGT 58.531 36.000 0.00 0.00 37.07 4.49
2518 2915 6.037172 CCTGTTTCTAATGGTTATTCCTCACG 59.963 42.308 0.00 0.00 37.07 4.35
2519 2916 6.884836 ACCTGTTTCTAATGGTTATTCCTCAC 59.115 38.462 0.00 0.00 37.07 3.51
2520 2917 7.027874 ACCTGTTTCTAATGGTTATTCCTCA 57.972 36.000 0.00 0.00 37.07 3.86
2521 2918 7.939784 AACCTGTTTCTAATGGTTATTCCTC 57.060 36.000 0.00 0.00 40.55 3.71
2522 2919 7.947890 TCAAACCTGTTTCTAATGGTTATTCCT 59.052 33.333 0.00 0.00 41.36 3.36
2523 2920 8.117813 TCAAACCTGTTTCTAATGGTTATTCC 57.882 34.615 0.00 0.00 41.36 3.01
2524 2921 9.406828 GTTCAAACCTGTTTCTAATGGTTATTC 57.593 33.333 0.00 0.00 41.36 1.75
2525 2922 8.919145 TGTTCAAACCTGTTTCTAATGGTTATT 58.081 29.630 0.00 0.00 41.36 1.40
2526 2923 8.472007 TGTTCAAACCTGTTTCTAATGGTTAT 57.528 30.769 0.00 0.00 41.36 1.89
2527 2924 7.013846 CCTGTTCAAACCTGTTTCTAATGGTTA 59.986 37.037 0.00 0.00 41.36 2.85
2528 2925 6.183360 CCTGTTCAAACCTGTTTCTAATGGTT 60.183 38.462 0.00 0.00 43.73 3.67
2529 2926 5.301805 CCTGTTCAAACCTGTTTCTAATGGT 59.698 40.000 0.00 0.00 0.00 3.55
2530 2927 5.534654 TCCTGTTCAAACCTGTTTCTAATGG 59.465 40.000 0.00 0.00 0.00 3.16
2531 2928 6.486657 TCTCCTGTTCAAACCTGTTTCTAATG 59.513 38.462 0.00 0.00 0.00 1.90
2532 2929 6.601332 TCTCCTGTTCAAACCTGTTTCTAAT 58.399 36.000 0.00 0.00 0.00 1.73
2533 2930 5.996644 TCTCCTGTTCAAACCTGTTTCTAA 58.003 37.500 0.00 0.00 0.00 2.10
2534 2931 5.130477 ACTCTCCTGTTCAAACCTGTTTCTA 59.870 40.000 0.00 0.00 0.00 2.10
2535 2932 4.080299 ACTCTCCTGTTCAAACCTGTTTCT 60.080 41.667 0.00 0.00 0.00 2.52
2536 2933 4.200092 ACTCTCCTGTTCAAACCTGTTTC 58.800 43.478 0.00 0.00 0.00 2.78
2537 2934 4.200092 GACTCTCCTGTTCAAACCTGTTT 58.800 43.478 0.00 0.00 0.00 2.83
2538 2935 3.199946 TGACTCTCCTGTTCAAACCTGTT 59.800 43.478 0.00 0.00 0.00 3.16
2539 2936 2.771943 TGACTCTCCTGTTCAAACCTGT 59.228 45.455 0.00 0.00 0.00 4.00
2540 2937 3.397482 CTGACTCTCCTGTTCAAACCTG 58.603 50.000 0.00 0.00 0.00 4.00
2541 2938 2.370189 CCTGACTCTCCTGTTCAAACCT 59.630 50.000 0.00 0.00 0.00 3.50
2542 2939 2.104963 ACCTGACTCTCCTGTTCAAACC 59.895 50.000 0.00 0.00 0.00 3.27
2543 2940 3.477210 ACCTGACTCTCCTGTTCAAAC 57.523 47.619 0.00 0.00 0.00 2.93
2544 2941 4.451900 GAAACCTGACTCTCCTGTTCAAA 58.548 43.478 0.00 0.00 0.00 2.69
2545 2942 3.492656 CGAAACCTGACTCTCCTGTTCAA 60.493 47.826 0.00 0.00 0.00 2.69
2546 2943 2.035961 CGAAACCTGACTCTCCTGTTCA 59.964 50.000 0.00 0.00 0.00 3.18
2547 2944 2.296471 TCGAAACCTGACTCTCCTGTTC 59.704 50.000 0.00 0.00 0.00 3.18
2548 2945 2.317040 TCGAAACCTGACTCTCCTGTT 58.683 47.619 0.00 0.00 0.00 3.16
2549 2946 1.996798 TCGAAACCTGACTCTCCTGT 58.003 50.000 0.00 0.00 0.00 4.00
2550 2947 2.159170 GGATCGAAACCTGACTCTCCTG 60.159 54.545 0.00 0.00 0.00 3.86
2551 2948 2.104170 GGATCGAAACCTGACTCTCCT 58.896 52.381 0.00 0.00 0.00 3.69
2552 2949 2.104170 AGGATCGAAACCTGACTCTCC 58.896 52.381 12.66 0.39 36.30 3.71
2560 2957 3.244911 ACATTTCCACAGGATCGAAACCT 60.245 43.478 8.44 8.44 38.40 3.50
2561 2958 3.081804 ACATTTCCACAGGATCGAAACC 58.918 45.455 0.00 0.00 0.00 3.27
2562 2959 3.119849 CCACATTTCCACAGGATCGAAAC 60.120 47.826 0.00 0.00 0.00 2.78
2563 2960 3.081061 CCACATTTCCACAGGATCGAAA 58.919 45.455 0.00 0.00 0.00 3.46
2564 2961 2.617788 CCCACATTTCCACAGGATCGAA 60.618 50.000 0.00 0.00 0.00 3.71
2565 2962 1.065491 CCCACATTTCCACAGGATCGA 60.065 52.381 0.00 0.00 0.00 3.59
2566 2963 1.340017 ACCCACATTTCCACAGGATCG 60.340 52.381 0.00 0.00 0.00 3.69
2567 2964 2.514458 ACCCACATTTCCACAGGATC 57.486 50.000 0.00 0.00 0.00 3.36
2568 2965 2.999185 AACCCACATTTCCACAGGAT 57.001 45.000 0.00 0.00 0.00 3.24
2569 2966 3.563261 CCATAACCCACATTTCCACAGGA 60.563 47.826 0.00 0.00 0.00 3.86
2570 2967 2.760092 CCATAACCCACATTTCCACAGG 59.240 50.000 0.00 0.00 0.00 4.00
2571 2968 2.760092 CCCATAACCCACATTTCCACAG 59.240 50.000 0.00 0.00 0.00 3.66
2572 2969 2.813907 CCCATAACCCACATTTCCACA 58.186 47.619 0.00 0.00 0.00 4.17
2573 2970 1.480545 GCCCATAACCCACATTTCCAC 59.519 52.381 0.00 0.00 0.00 4.02
2574 2971 1.621072 GGCCCATAACCCACATTTCCA 60.621 52.381 0.00 0.00 0.00 3.53
2575 2972 1.119684 GGCCCATAACCCACATTTCC 58.880 55.000 0.00 0.00 0.00 3.13
2597 2994 5.127031 CCCTTCATACTTTTAACCCACATGG 59.873 44.000 0.00 0.00 41.37 3.66
2598 2995 5.394115 GCCCTTCATACTTTTAACCCACATG 60.394 44.000 0.00 0.00 0.00 3.21
2599 2996 4.709886 GCCCTTCATACTTTTAACCCACAT 59.290 41.667 0.00 0.00 0.00 3.21
2600 2997 4.083565 GCCCTTCATACTTTTAACCCACA 58.916 43.478 0.00 0.00 0.00 4.17
2601 2998 4.083565 TGCCCTTCATACTTTTAACCCAC 58.916 43.478 0.00 0.00 0.00 4.61
2602 2999 4.043561 TCTGCCCTTCATACTTTTAACCCA 59.956 41.667 0.00 0.00 0.00 4.51
2603 3000 4.595986 TCTGCCCTTCATACTTTTAACCC 58.404 43.478 0.00 0.00 0.00 4.11
2604 3001 7.502561 ACATATCTGCCCTTCATACTTTTAACC 59.497 37.037 0.00 0.00 0.00 2.85
2605 3002 8.451908 ACATATCTGCCCTTCATACTTTTAAC 57.548 34.615 0.00 0.00 0.00 2.01
2606 3003 8.494433 AGACATATCTGCCCTTCATACTTTTAA 58.506 33.333 0.00 0.00 32.29 1.52
2607 3004 8.034313 AGACATATCTGCCCTTCATACTTTTA 57.966 34.615 0.00 0.00 32.29 1.52
2608 3005 6.904626 AGACATATCTGCCCTTCATACTTTT 58.095 36.000 0.00 0.00 32.29 2.27
2609 3006 6.506538 AGACATATCTGCCCTTCATACTTT 57.493 37.500 0.00 0.00 32.29 2.66
2610 3007 6.294473 CAAGACATATCTGCCCTTCATACTT 58.706 40.000 0.00 0.00 34.48 2.24
2611 3008 5.744300 GCAAGACATATCTGCCCTTCATACT 60.744 44.000 0.00 0.00 34.48 2.12
2612 3009 4.453819 GCAAGACATATCTGCCCTTCATAC 59.546 45.833 0.00 0.00 34.48 2.39
2613 3010 4.102996 TGCAAGACATATCTGCCCTTCATA 59.897 41.667 0.00 0.00 34.48 2.15
2614 3011 3.117776 TGCAAGACATATCTGCCCTTCAT 60.118 43.478 0.00 0.00 34.48 2.57
2615 3012 2.239402 TGCAAGACATATCTGCCCTTCA 59.761 45.455 0.00 0.00 34.48 3.02
2616 3013 2.923121 TGCAAGACATATCTGCCCTTC 58.077 47.619 0.00 0.00 34.48 3.46
2617 3014 3.117776 TCATGCAAGACATATCTGCCCTT 60.118 43.478 0.00 0.00 36.64 3.95
2618 3015 2.440627 TCATGCAAGACATATCTGCCCT 59.559 45.455 0.00 0.00 36.64 5.19
2619 3016 2.854963 TCATGCAAGACATATCTGCCC 58.145 47.619 0.00 0.00 36.64 5.36
2620 3017 4.070009 TGATCATGCAAGACATATCTGCC 58.930 43.478 0.00 0.00 36.64 4.85
2621 3018 5.181433 ACATGATCATGCAAGACATATCTGC 59.819 40.000 31.17 0.00 42.39 4.26
2622 3019 6.803154 ACATGATCATGCAAGACATATCTG 57.197 37.500 31.17 8.44 42.39 2.90
2623 3020 7.119407 GCTTACATGATCATGCAAGACATATCT 59.881 37.037 36.75 18.21 42.17 1.98
2624 3021 7.094933 TGCTTACATGATCATGCAAGACATATC 60.095 37.037 36.75 23.96 42.17 1.63
2625 3022 6.713450 TGCTTACATGATCATGCAAGACATAT 59.287 34.615 36.75 19.22 42.17 1.78
2626 3023 6.056884 TGCTTACATGATCATGCAAGACATA 58.943 36.000 36.75 22.61 42.17 2.29
2627 3024 4.885325 TGCTTACATGATCATGCAAGACAT 59.115 37.500 36.75 20.39 42.17 3.06
2628 3025 4.263435 TGCTTACATGATCATGCAAGACA 58.737 39.130 36.75 30.69 42.17 3.41
2629 3026 4.888038 TGCTTACATGATCATGCAAGAC 57.112 40.909 36.75 29.20 42.17 3.01
2632 3029 3.181484 GCCTTGCTTACATGATCATGCAA 60.181 43.478 31.17 26.32 42.39 4.08
2633 3030 2.359848 GCCTTGCTTACATGATCATGCA 59.640 45.455 31.17 21.89 42.39 3.96
2634 3031 2.359848 TGCCTTGCTTACATGATCATGC 59.640 45.455 31.17 19.70 42.39 4.06
2635 3032 4.037565 ACATGCCTTGCTTACATGATCATG 59.962 41.667 29.95 29.95 43.04 3.07
2636 3033 4.212716 ACATGCCTTGCTTACATGATCAT 58.787 39.130 1.18 1.18 43.04 2.45
2637 3034 3.623703 ACATGCCTTGCTTACATGATCA 58.376 40.909 0.00 0.00 43.04 2.92
2638 3035 3.628942 TGACATGCCTTGCTTACATGATC 59.371 43.478 0.00 4.22 43.04 2.92
2639 3036 3.623703 TGACATGCCTTGCTTACATGAT 58.376 40.909 0.00 0.00 43.04 2.45
2640 3037 3.011818 CTGACATGCCTTGCTTACATGA 58.988 45.455 0.00 0.00 43.04 3.07
2641 3038 3.011818 TCTGACATGCCTTGCTTACATG 58.988 45.455 0.00 0.00 45.28 3.21
2642 3039 3.276857 CTCTGACATGCCTTGCTTACAT 58.723 45.455 0.00 0.00 0.00 2.29
2643 3040 2.616256 CCTCTGACATGCCTTGCTTACA 60.616 50.000 0.00 0.00 0.00 2.41
2644 3041 2.012673 CCTCTGACATGCCTTGCTTAC 58.987 52.381 0.00 0.00 0.00 2.34
2645 3042 1.908619 TCCTCTGACATGCCTTGCTTA 59.091 47.619 0.00 0.00 0.00 3.09
2646 3043 0.694771 TCCTCTGACATGCCTTGCTT 59.305 50.000 0.00 0.00 0.00 3.91
2647 3044 0.917533 ATCCTCTGACATGCCTTGCT 59.082 50.000 0.00 0.00 0.00 3.91
2648 3045 2.492012 CTATCCTCTGACATGCCTTGC 58.508 52.381 0.00 0.00 0.00 4.01
2649 3046 2.492012 GCTATCCTCTGACATGCCTTG 58.508 52.381 0.00 0.00 0.00 3.61
2650 3047 1.419387 GGCTATCCTCTGACATGCCTT 59.581 52.381 0.00 0.00 36.32 4.35
2651 3048 1.055040 GGCTATCCTCTGACATGCCT 58.945 55.000 0.00 0.00 36.32 4.75
2652 3049 1.055040 AGGCTATCCTCTGACATGCC 58.945 55.000 0.00 0.00 38.72 4.40
2653 3050 4.550076 AATAGGCTATCCTCTGACATGC 57.450 45.455 7.63 0.00 43.06 4.06
2654 3051 6.849085 ACTAATAGGCTATCCTCTGACATG 57.151 41.667 7.63 0.00 43.06 3.21
2655 3052 8.976353 CATAACTAATAGGCTATCCTCTGACAT 58.024 37.037 7.63 0.00 43.06 3.06
2656 3053 7.950684 ACATAACTAATAGGCTATCCTCTGACA 59.049 37.037 7.63 0.00 43.06 3.58
2657 3054 8.356000 ACATAACTAATAGGCTATCCTCTGAC 57.644 38.462 7.63 0.00 43.06 3.51
2658 3055 7.337184 CGACATAACTAATAGGCTATCCTCTGA 59.663 40.741 7.63 0.00 43.06 3.27
2659 3056 7.337184 TCGACATAACTAATAGGCTATCCTCTG 59.663 40.741 7.63 4.25 43.06 3.35
2660 3057 7.337436 GTCGACATAACTAATAGGCTATCCTCT 59.663 40.741 11.55 0.00 43.06 3.69
2661 3058 7.120873 TGTCGACATAACTAATAGGCTATCCTC 59.879 40.741 15.76 0.00 43.06 3.71
2662 3059 6.946583 TGTCGACATAACTAATAGGCTATCCT 59.053 38.462 15.76 0.00 46.57 3.24
2663 3060 7.154435 TGTCGACATAACTAATAGGCTATCC 57.846 40.000 15.76 0.00 0.00 2.59
2664 3061 8.080417 TGTTGTCGACATAACTAATAGGCTATC 58.920 37.037 20.80 0.00 32.00 2.08
2665 3062 7.948357 TGTTGTCGACATAACTAATAGGCTAT 58.052 34.615 20.80 0.00 32.00 2.97
2666 3063 7.337480 TGTTGTCGACATAACTAATAGGCTA 57.663 36.000 20.80 0.00 32.00 3.93
2667 3064 6.216801 TGTTGTCGACATAACTAATAGGCT 57.783 37.500 20.80 0.00 32.00 4.58
2668 3065 6.897259 TTGTTGTCGACATAACTAATAGGC 57.103 37.500 20.80 0.00 38.26 3.93
2669 3066 8.642908 TGATTGTTGTCGACATAACTAATAGG 57.357 34.615 20.80 0.00 38.26 2.57
2672 3069 9.261180 CCTATGATTGTTGTCGACATAACTAAT 57.739 33.333 20.80 15.84 38.26 1.73
2673 3070 8.255206 ACCTATGATTGTTGTCGACATAACTAA 58.745 33.333 20.80 12.19 38.26 2.24
2674 3071 7.778083 ACCTATGATTGTTGTCGACATAACTA 58.222 34.615 20.80 12.77 38.26 2.24
2675 3072 6.640518 ACCTATGATTGTTGTCGACATAACT 58.359 36.000 20.80 4.80 38.26 2.24
2676 3073 6.903883 ACCTATGATTGTTGTCGACATAAC 57.096 37.500 20.80 16.06 38.26 1.89
2677 3074 6.982141 GGTACCTATGATTGTTGTCGACATAA 59.018 38.462 20.80 17.52 38.26 1.90
2678 3075 6.097129 TGGTACCTATGATTGTTGTCGACATA 59.903 38.462 20.80 9.07 38.26 2.29
2679 3076 5.105106 TGGTACCTATGATTGTTGTCGACAT 60.105 40.000 20.80 3.63 38.26 3.06
2680 3077 4.221041 TGGTACCTATGATTGTTGTCGACA 59.779 41.667 15.76 15.76 36.19 4.35
2681 3078 4.751060 TGGTACCTATGATTGTTGTCGAC 58.249 43.478 14.36 9.11 0.00 4.20
2682 3079 5.408880 TTGGTACCTATGATTGTTGTCGA 57.591 39.130 14.36 0.00 0.00 4.20
2683 3080 4.570772 CCTTGGTACCTATGATTGTTGTCG 59.429 45.833 14.36 0.00 0.00 4.35
2684 3081 4.881850 CCCTTGGTACCTATGATTGTTGTC 59.118 45.833 14.36 0.00 0.00 3.18
2685 3082 4.855340 CCCTTGGTACCTATGATTGTTGT 58.145 43.478 14.36 0.00 0.00 3.32
2686 3083 3.632145 GCCCTTGGTACCTATGATTGTTG 59.368 47.826 14.36 0.00 0.00 3.33
2687 3084 3.684413 CGCCCTTGGTACCTATGATTGTT 60.684 47.826 14.36 0.00 0.00 2.83
2688 3085 2.158813 CGCCCTTGGTACCTATGATTGT 60.159 50.000 14.36 0.00 0.00 2.71
2689 3086 2.104111 TCGCCCTTGGTACCTATGATTG 59.896 50.000 14.36 0.00 0.00 2.67
2690 3087 2.368875 CTCGCCCTTGGTACCTATGATT 59.631 50.000 14.36 0.00 0.00 2.57
2691 3088 1.971357 CTCGCCCTTGGTACCTATGAT 59.029 52.381 14.36 0.00 0.00 2.45
2692 3089 1.410004 CTCGCCCTTGGTACCTATGA 58.590 55.000 14.36 1.92 0.00 2.15
2693 3090 0.393077 CCTCGCCCTTGGTACCTATG 59.607 60.000 14.36 2.30 0.00 2.23
2694 3091 0.031414 ACCTCGCCCTTGGTACCTAT 60.031 55.000 14.36 0.00 34.36 2.57
2695 3092 0.630673 TACCTCGCCCTTGGTACCTA 59.369 55.000 14.36 4.36 37.74 3.08
2696 3093 1.389327 TACCTCGCCCTTGGTACCT 59.611 57.895 14.36 0.00 37.74 3.08
2697 3094 4.039042 TACCTCGCCCTTGGTACC 57.961 61.111 4.43 4.43 37.74 3.34
2699 3096 0.611618 TTCGTACCTCGCCCTTGGTA 60.612 55.000 0.00 0.00 37.74 3.25
2700 3097 1.885163 CTTCGTACCTCGCCCTTGGT 61.885 60.000 0.00 0.00 40.12 3.67
2701 3098 1.153628 CTTCGTACCTCGCCCTTGG 60.154 63.158 0.00 0.00 39.67 3.61
2702 3099 0.179134 CTCTTCGTACCTCGCCCTTG 60.179 60.000 0.00 0.00 39.67 3.61
2703 3100 0.323178 TCTCTTCGTACCTCGCCCTT 60.323 55.000 0.00 0.00 39.67 3.95
2704 3101 0.323178 TTCTCTTCGTACCTCGCCCT 60.323 55.000 0.00 0.00 39.67 5.19
2705 3102 0.179142 GTTCTCTTCGTACCTCGCCC 60.179 60.000 0.00 0.00 39.67 6.13
2706 3103 0.179142 GGTTCTCTTCGTACCTCGCC 60.179 60.000 0.00 0.00 39.67 5.54
2707 3104 0.524862 TGGTTCTCTTCGTACCTCGC 59.475 55.000 0.00 0.00 39.67 5.03
2708 3105 3.505464 AATGGTTCTCTTCGTACCTCG 57.495 47.619 0.00 0.00 41.41 4.63
2709 3106 4.630505 GGAAAATGGTTCTCTTCGTACCTC 59.369 45.833 0.00 0.00 33.05 3.85
2710 3107 4.286291 AGGAAAATGGTTCTCTTCGTACCT 59.714 41.667 0.00 0.00 33.05 3.08
2711 3108 4.392138 CAGGAAAATGGTTCTCTTCGTACC 59.608 45.833 0.00 0.00 0.00 3.34
2712 3109 4.142881 GCAGGAAAATGGTTCTCTTCGTAC 60.143 45.833 0.00 0.00 0.00 3.67
2713 3110 4.000988 GCAGGAAAATGGTTCTCTTCGTA 58.999 43.478 0.00 0.00 0.00 3.43
2714 3111 2.814336 GCAGGAAAATGGTTCTCTTCGT 59.186 45.455 0.00 0.00 0.00 3.85
2715 3112 3.077359 AGCAGGAAAATGGTTCTCTTCG 58.923 45.455 0.00 0.00 0.00 3.79
2716 3113 3.126000 CGAGCAGGAAAATGGTTCTCTTC 59.874 47.826 0.00 0.00 0.00 2.87
2717 3114 3.077359 CGAGCAGGAAAATGGTTCTCTT 58.923 45.455 0.00 0.00 0.00 2.85
2718 3115 2.039084 ACGAGCAGGAAAATGGTTCTCT 59.961 45.455 0.00 0.00 0.00 3.10
2719 3116 2.427506 ACGAGCAGGAAAATGGTTCTC 58.572 47.619 0.00 0.00 0.00 2.87
2720 3117 2.554032 CAACGAGCAGGAAAATGGTTCT 59.446 45.455 0.00 0.00 0.00 3.01
2721 3118 2.552315 TCAACGAGCAGGAAAATGGTTC 59.448 45.455 0.00 0.00 0.00 3.62
2722 3119 2.582052 TCAACGAGCAGGAAAATGGTT 58.418 42.857 0.00 0.00 0.00 3.67
2723 3120 2.270352 TCAACGAGCAGGAAAATGGT 57.730 45.000 0.00 0.00 0.00 3.55
2724 3121 3.243367 TGTTTCAACGAGCAGGAAAATGG 60.243 43.478 0.00 0.00 32.85 3.16
2725 3122 3.963665 TGTTTCAACGAGCAGGAAAATG 58.036 40.909 0.00 0.00 32.85 2.32
2726 3123 4.499696 CCTTGTTTCAACGAGCAGGAAAAT 60.500 41.667 1.75 0.00 38.78 1.82
2727 3124 3.181491 CCTTGTTTCAACGAGCAGGAAAA 60.181 43.478 1.75 0.00 38.78 2.29
2728 3125 2.357637 CCTTGTTTCAACGAGCAGGAAA 59.642 45.455 1.75 0.00 38.78 3.13
2729 3126 1.946768 CCTTGTTTCAACGAGCAGGAA 59.053 47.619 1.75 0.00 38.78 3.36
2730 3127 1.593196 CCTTGTTTCAACGAGCAGGA 58.407 50.000 1.75 0.00 38.78 3.86
2731 3128 0.040067 GCCTTGTTTCAACGAGCAGG 60.040 55.000 1.75 0.00 38.78 4.85
2732 3129 0.384725 CGCCTTGTTTCAACGAGCAG 60.385 55.000 1.75 0.00 38.78 4.24
2733 3130 1.646540 CGCCTTGTTTCAACGAGCA 59.353 52.632 1.75 0.00 38.78 4.26
2734 3131 1.082104 CCGCCTTGTTTCAACGAGC 60.082 57.895 1.75 0.00 38.78 5.03
2735 3132 0.234884 GTCCGCCTTGTTTCAACGAG 59.765 55.000 0.00 0.38 39.63 4.18
2736 3133 1.161563 GGTCCGCCTTGTTTCAACGA 61.162 55.000 0.00 0.00 0.00 3.85
2737 3134 1.281656 GGTCCGCCTTGTTTCAACG 59.718 57.895 0.00 0.00 0.00 4.10
2738 3135 0.741915 TTGGTCCGCCTTGTTTCAAC 59.258 50.000 0.00 0.00 35.27 3.18
2739 3136 1.698506 ATTGGTCCGCCTTGTTTCAA 58.301 45.000 0.00 0.00 35.27 2.69
2740 3137 2.432444 CTATTGGTCCGCCTTGTTTCA 58.568 47.619 0.00 0.00 35.27 2.69
2741 3138 1.743394 CCTATTGGTCCGCCTTGTTTC 59.257 52.381 0.00 0.00 35.27 2.78
2742 3139 1.834188 CCTATTGGTCCGCCTTGTTT 58.166 50.000 0.00 0.00 35.27 2.83
2743 3140 0.679960 GCCTATTGGTCCGCCTTGTT 60.680 55.000 0.00 0.00 35.27 2.83
2744 3141 1.077716 GCCTATTGGTCCGCCTTGT 60.078 57.895 0.00 0.00 35.27 3.16
2745 3142 0.679640 TTGCCTATTGGTCCGCCTTG 60.680 55.000 0.00 0.00 35.27 3.61
2746 3143 0.039035 TTTGCCTATTGGTCCGCCTT 59.961 50.000 0.00 0.00 35.27 4.35
2747 3144 0.394352 CTTTGCCTATTGGTCCGCCT 60.394 55.000 0.00 0.00 35.27 5.52
2748 3145 0.679960 ACTTTGCCTATTGGTCCGCC 60.680 55.000 0.00 0.00 35.27 6.13
2749 3146 1.132453 GAACTTTGCCTATTGGTCCGC 59.868 52.381 0.00 0.00 35.27 5.54
2750 3147 2.678336 GAGAACTTTGCCTATTGGTCCG 59.322 50.000 0.00 0.00 35.27 4.79
2751 3148 2.678336 CGAGAACTTTGCCTATTGGTCC 59.322 50.000 0.00 0.00 35.27 4.46
2752 3149 3.335579 ACGAGAACTTTGCCTATTGGTC 58.664 45.455 0.00 0.00 35.27 4.02
2753 3150 3.335579 GACGAGAACTTTGCCTATTGGT 58.664 45.455 0.00 0.00 35.27 3.67
2754 3151 2.678336 GGACGAGAACTTTGCCTATTGG 59.322 50.000 0.00 0.00 0.00 3.16
2755 3152 3.334691 TGGACGAGAACTTTGCCTATTG 58.665 45.455 0.00 0.00 0.00 1.90
2756 3153 3.695830 TGGACGAGAACTTTGCCTATT 57.304 42.857 0.00 0.00 0.00 1.73
2757 3154 3.738281 CGATGGACGAGAACTTTGCCTAT 60.738 47.826 0.00 0.00 45.77 2.57
2758 3155 2.416836 CGATGGACGAGAACTTTGCCTA 60.417 50.000 0.00 0.00 45.77 3.93
2759 3156 1.673033 CGATGGACGAGAACTTTGCCT 60.673 52.381 0.00 0.00 45.77 4.75
2760 3157 0.721718 CGATGGACGAGAACTTTGCC 59.278 55.000 0.00 0.00 45.77 4.52
2761 3158 1.710013 TCGATGGACGAGAACTTTGC 58.290 50.000 0.00 0.00 46.45 3.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.